Rh1AG039500

PPR repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0007852
Physical Location & Seq
Forward (+)
6961339 .. 6966084
4746 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG039500.1

Sequence Viewer

Length: 2124 bp
ATGCCCTTTCCTCCCAAGTTCTCCTTATTCTATGGCCACCGCAACCCCTCCCGGAACCGCCCCACCGTCCGCGGCAGCCGCGGCCTCTCTCCCCCAAAACCCAACCCCACCCCAACTCAATCCCAGCCCTTCGATCTCTCCAAGTGGGACCCCCACCAATCTCCGCCGTCCACCTCCTCCACCCCCAACCCCGCCGTCCCCCTCTCCTTCCTCTCCCCCATCGCCCGCTTCATCCTCGACGCCTTCCGCAAGAACCGCAGCCGCTGGGGCCCGCCGGTCGTCTCGGAGCTCCAGAAGCTCCGCCGCGTCACCCCCGACCTGGTCGCCGAGGTCCTCAAGGTCCAAAACGACCCCGTTTCGGCCTCCAAGCTCTTCCACTGGGCAGGTAAGCAAAAGGGTTTCAAGCACACCTTCGCTTCCTACAATGCCTTGACCTATTGCCTGAACCGGGCCCACCGGTTCAGGTCGGCCGACCAAGTCCCCGACTTGATGGAGTCTCAGGGGAAACCCCCCACCGAGAAACAGTTTGAGATTCTGATCAGAATGCACTCTGATGCCAATAGAGGTCTTAGGGTTTATCATGTCTATGAGAAGATGAAAAAGTTTGGGGTTAAACCCAGGGTTTATTTGTACAATAGGGTAATGGATGCGTTGGTGAAAACAGGTCATTTGGATTTGGCATTGTCGGTTTACGACAATTTTCGGGGTGATGGGTTGGTGGAGGAGAGTGTGACTTTTATGATTTTGATAAAGGGGATGTGTAAATGTGGGAGAGTTGATGAAATGTTGGGGCTTTTGGATAGAATGAGGGTGAGTTTGTGTAAGCCAGACGTGTTTGCTTACACTGCAATGATAAAGGTGATGGTTTCGGAGGGGGATTTGGATGGTTGTTTGAAGGTTTGGGAGGAAATGAGGAGGGATAGAGTTGAGGCGGATGCTATGGCGTATGTGACTCTGGTTACCGGGTTGTGTAAAGGAGGGAGGGTGGAGAAGGGGTATGAGTTGTTTAGGGAGATGAAGGAGAAGGGTTTCTTGATTGATAGAGCGATTTATGGTGTGCTCGTTGAGGGGTTTGTGGAAGACAGGAAGGTTGGGGCAGCGTGTGATTTGTTGAAGGATTTGGTGGGATCAGGGTATAGAGCAGATTTGGGGATATATAATTCTCTGATCAAGGGTTTATGTGATGTTAAACGGGTTGATAAGGCTTGTAAGCTTTTCCGAGTAGCAGTTCAAGAGGGTCTTGGGCCGGATTTTGCGACGGTGAATCCCATTCTGGTGTCTTATGCTGAGATGAGAAAAATGGATAACTTTTGCGAGTTGCTTGCACAGATGGAGAAATGCGGTTGTCCTGTTATTGATGATCTTTCGAAATTCTTTTCCATTGTTGCTGAAAAGGAGGACGGAGTCATGATGGCTTTGGAAGTGTTTGAAGACTTGAAAGTTAAAAATTATTCTAGTGTTGCGATCTACAATATCCTTATTGCCAGCCTCCACAAATTTGGGAAAGTGAAGAAAGCATTATCCCTCTTTGATGAGATGAAGAGTTTTGATTTCCAGCCTGACTCGTCCACTTATAGCTCTGCGATTATGTGTTATATTGAAGAAGGGGATCTCCATGAAGCTTGTGCCTGTCATAATAAGATAATTGAGATATCTTGTGTTCCTTCTATTGCTGCCTATCGCTCTCTTGCTAAAGGGCTTTTCAATGTTGGAGAGATTGATGCAGTTATGCTGCTAGTCCGGGACTGCTTAGCCAGTGTGACAAGTGGGCCCATGACATTCAAGTATTCTCTTACGGTTCTCCATGCATGTAGATCCAATAATGCTGAGAAGGTGATTGATGTACTGAATGAGATGATGCAGCAGGGTTGTCCACCAGATCATGTTATATACTCTGCTATAATCTCTGGCATGTGTAAGCATGGCACAATAGAGGAGGCAAGGAAGGTATTTTCAAATTTGAAAGAGCGCAAACTTATAACAGAAGCCAACATGATTGTGTATGATGATATATTAATTGAACACATGAAGAAGAAGACAGCAGATCTGGTAGTGTCAGGGTTGAAGTTTTTTGGTTTAGAATCCAAGCTGAAAGCAAAGGGTTGTAAACTGCTGTCAGGTTGA

Protein Analysis

707

Amino Acids

79.31

Weight (kDa)

8.8

Isoelectric Point (pI)

37.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 132 - 275 1.8e-09 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 243 - 287 1e-10 PPR repeat family
PPR_1 PF12854 243 - 270 2.6e-06 PPR repeat
PPR_2 PF13041 276 - 325 5e-11 PPR repeat family
PPR_1 PF12854 309 - 340 6.7e-07 PPR repeat
PPR_2 PF13041 312 - 359 1.7e-07 PPR repeat family
PPR PF01535 315 - 344 4.1e-07 PPR repeat
PPR_1 PF12854 378 - 407 1.8e-06 PPR repeat
PPR_2 PF13041 384 - 422 5.6e-06 PPR repeat family
PPR_2 PF13041 486 - 529 3e-11 PPR repeat family
PPR PF01535 489 - 517 3.1e-06 PPR repeat
PPR_1 PF12854 623 - 652 5.6e-09 PPR repeat
PPR_2 PF13041 626 - 658 4.1e-06 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1979
Acc36I ACCTGC 1 cut(s) 374
AccII CGCG 3 cut(s) 72, 81, 306
AclWI GGATC 3 cut(s) 1135, 1617, 1809
AcoI YGGCCR 2 cut(s) 34, 468
AcsI RAATTY 3 cut(s) 1370, 1496, 1957
AcyI GRCGYC 1 cut(s) 240
AfaI GTAC 2 cut(s) 632, 1845
AfiI CCNNNNNNNGG 3 cut(s) 319, 358, 448
AflIII ACRYGT 1 cut(s) 831
AgeI ACCGGT 1 cut(s) 456
AjiI CACGTC 1 cut(s) 832
AjnI CCWGG 2 cut(s) 318, 617
AluBI AGCT 7 cut(s) 289, 298, 370, 1213, 1578, 1622, 2089
AluI AGCT 7 cut(s) 289, 298, 370, 1213, 1578, 1622, 2089
Alw21I GWGCWC 2 cut(s) 291, 1062
Alw26I GTCTC 2 cut(s) 286, 501
AlwI GGATC 3 cut(s) 1135, 1617, 1809
AlwNI CAGNNNCTG 1 cut(s) 264
AoxI GGCC 8 cut(s) 34, 82, 268, 360, 450, 468, 1244, 1769
ApaI GGGCCC 3 cut(s) 272, 454, 1773
ApeKI GCWGC 6 cut(s) 75, 258, 1097, 1673, 1732, 1861
ApoI RAATTY 3 cut(s) 1370, 1496, 1957
AseI ATTAAT 1 cut(s) 2015
AsiGI ACCGGT 1 cut(s) 456
Asp700I GAANNNNTTC 1 cut(s) 1028
AspLEI GCGC 1 cut(s) 1971
AsuC2I CCSGG 4 cut(s) 52, 449, 964, 1742
AsuHPI GGTGA 7 cut(s) 301, 667, 719, 823, 871, 1273, 1846
AsuII TTCGAA 1 cut(s) 1367
AvaII GGWCC 3 cut(s) 148, 331, 340
BaeGI GKGCMC 3 cut(s) 272, 454, 1773
BalI TGGCCA 1 cut(s) 36
BanII GRGCYC 4 cut(s) 272, 291, 454, 1773
BbsI GAAGAC 3 cut(s) 1086, 1437, 2042
Bbv12I GWGCWC 2 cut(s) 291, 1062
BbvI GCAGC 6 cut(s) 87, 270, 1109, 1660, 1719, 1873
BccI CCATC 7 cut(s) 227, 484, 704, 856, 878, 1324, 1405
BceAI ACGGC 2 cut(s) 151, 179
BcgI CGANNNNNNTGC 2 cut(s) 1304, 1338
BciT130I CCWGG 2 cut(s) 320, 619
BclI TGATCA 2 cut(s) 537, 1167
BcnI CCSGG 4 cut(s) 52, 449, 964, 1742
BcoDI GTCTC 2 cut(s) 286, 501
BfaI CTAG 2 cut(s) 1455, 1736
BfuAI ACCTGC 1 cut(s) 374
BglI GCCNNNNNGGC 1 cut(s) 267
BglII AGATCT 1 cut(s) 2044
BlpI GCTNAGC 1 cut(s) 1750
Bme1390I CCNGG 6 cut(s) 52, 320, 449, 619, 964, 1742
Bme18I GGWCC 3 cut(s) 148, 331, 340
BmgBI CACGTC 1 cut(s) 832
BmiI GGNNCC 7 cut(s) 56, 149, 150, 269, 270, 452, 1771
BmrFI CCNGG 6 cut(s) 52, 320, 449, 619, 964, 1742
BmrI ACTGGG 1 cut(s) 388
BmsI GCATC 5 cut(s) 544, 637, 925, 1711, 1848
BmuI ACTGGG 1 cut(s) 388
BpiI GAAGAC 3 cut(s) 1086, 1437, 2042
BpmI CTGGAG 1 cut(s) 275
Bpu1102I GCTNAGC 1 cut(s) 1750
Bpu14I TTCGAA 1 cut(s) 1367
BpuEI CTTGAG 1 cut(s) 320
BpuMI CCSGG 4 cut(s) 52, 449, 964, 1742
BsaBI GATNNNNATC 1 cut(s) 536
BsaHI GRCGYC 1 cut(s) 240
BsaJI CCNNGG 5 cut(s) 70, 79, 327, 617, 618
BsaWI WCCGGW 1 cut(s) 456
BsaXI ACNNNNNCTCC 4 cut(s) 969, 980, 999, 1010
Bsc4I CCNNNNNNNGG 3 cut(s) 319, 358, 448
Bse118I RCCGGY 2 cut(s) 274, 456
Bse1I ACTGG 2 cut(s) 383, 1755
Bse3DI GCAATG 1 cut(s) 855
Bse8I GATNNNNATC 1 cut(s) 536
BseBI CCWGG 2 cut(s) 320, 619
BseDI CCNNGG 5 cut(s) 70, 79, 327, 617, 618
BseGI GGATG 5 cut(s) 231, 652, 762, 889, 940
BseJI GATNNNNATC 1 cut(s) 536
BseLI CCNNNNNNNGG 3 cut(s) 319, 358, 448
BseMI GCAATG 1 cut(s) 855
BseMII CTCAG 3 cut(s) 512, 1278, 1818
BseNI ACTGG 2 cut(s) 383, 1755
BseRI GAGGAG 4 cut(s) 166, 737, 928, 1949
BseSI GKGCMC 3 cut(s) 272, 454, 1773
BseX3I CGGCCG 1 cut(s) 468
BseXI GCAGC 6 cut(s) 87, 270, 1109, 1660, 1719, 1873
BseYI CCCAGC 2 cut(s) 123, 264
Bsh1236I CGCG 3 cut(s) 72, 81, 306
Bsh1285I CGRYCG 2 cut(s) 279, 471
BshFI GGCC 8 cut(s) 36, 84, 270, 362, 452, 470, 1246, 1771
BshTI ACCGGT 1 cut(s) 456
BsiEI CGRYCG 2 cut(s) 279, 471
BsiHKAI GWGCWC 2 cut(s) 291, 1062
BsiSI CCGG 7 cut(s) 52, 275, 448, 457, 963, 1247, 1741
BslFI GGGAC 4 cut(s) 161, 182, 464, 1757
BslI CCNNNNNNNGG 3 cut(s) 319, 358, 448
BsmAI GTCTC 2 cut(s) 286, 501
BsmBI CGTCTC 1 cut(s) 286
BsmFI GGGAC 4 cut(s) 161, 182, 464, 1757
BsmI GAATGC 1 cut(s) 549
BsnI GGCC 8 cut(s) 36, 84, 270, 362, 452, 470, 1246, 1771
Bsp119I TTCGAA 1 cut(s) 1367
Bsp120I GGGCCC 3 cut(s) 268, 450, 1769
Bsp1286I GDGCHC 5 cut(s) 272, 291, 454, 1062, 1773
Bsp1407I TGTACA 1 cut(s) 630
Bsp1720I GCTNAGC 1 cut(s) 1750
BspANI GGCC 8 cut(s) 36, 84, 270, 362, 452, 470, 1246, 1771
BspCNI CTCAG 3 cut(s) 511, 1279, 1819
BspFNI CGCG 3 cut(s) 72, 81, 306
BspHI TCATGA 1 cut(s) 1407
BspLI GGNNCC 7 cut(s) 56, 149, 150, 269, 270, 452, 1771
BspMI ACCTGC 1 cut(s) 374
BspPI GGATC 3 cut(s) 1135, 1617, 1809
BspQI GCTCTTC 1 cut(s) 377
BspT104I TTCGAA 1 cut(s) 1367
BsrDI GCAATG 1 cut(s) 855
BsrFI RCCGGY 2 cut(s) 274, 456
BsrGI TGTACA 1 cut(s) 630
BsrI ACTGG 2 cut(s) 383, 1755
BssAI RCCGGY 2 cut(s) 274, 456
BssECI CCNNGG 5 cut(s) 70, 79, 327, 617, 618
BssNI GRCGYC 1 cut(s) 240
Bst2UI CCWGG 2 cut(s) 320, 619
Bst4CI ACNGT 4 cut(s) 67, 525, 1261, 1798
Bst6I CTCTTC 2 cut(s) 377, 1535
BstACI GRCGYC 1 cut(s) 240
BstAUI TGTACA 1 cut(s) 630
BstBI TTCGAA 1 cut(s) 1367
BstC8I GCNNGC 4 cut(s) 226, 272, 1323, 1486
BstDEI CTNAG 5 cut(s) 498, 569, 1287, 1750, 1827
BstDSI CCRYGG 2 cut(s) 70, 79
BstEII GGTNACC 1 cut(s) 958
BstF5I GGATG 5 cut(s) 231, 652, 762, 889, 940
BstFNI CGCG 3 cut(s) 72, 81, 306
BstHHI GCGC 1 cut(s) 1971
BstMAI GTCTC 2 cut(s) 286, 501
BstMCI CGRYCG 2 cut(s) 279, 471
BstMWI GCNNNNNNNGC 6 cut(s) 78, 81, 255, 267, 295, 845
BstNI CCWGG 2 cut(s) 320, 619
BstNSI RCATGY 2 cut(s) 1812, 1915
BstPI GGTNACC 1 cut(s) 958
BstSCI CCNGG 6 cut(s) 50, 318, 447, 617, 962, 1740
BstSLI GKGCMC 3 cut(s) 272, 454, 1773
BstUI CGCG 3 cut(s) 72, 81, 306
BstV1I GCAGC 6 cut(s) 87, 270, 1109, 1660, 1719, 1873
BstV2I GAAGAC 3 cut(s) 1086, 1437, 2042
BstX2I RGATCY 3 cut(s) 1609, 1814, 2044
BstXI CCANNNNNNTGG 1 cut(s) 1499
BstYI RGATCY 3 cut(s) 1609, 1814, 2044
BstZI CGGCCG 1 cut(s) 468
BsuRI GGCC 8 cut(s) 36, 84, 270, 362, 452, 470, 1246, 1771
BtgI CCRYGG 2 cut(s) 70, 79
BtgZI GCGATG 1 cut(s) 205
BtrI CACGTC 1 cut(s) 832
BtsCI GGATG 5 cut(s) 231, 652, 762, 889, 940
BtsI GCAGTG 1 cut(s) 843
BtsIMutI CAGTG 3 cut(s) 376, 843, 1762
BveI ACCTGC 1 cut(s) 374
Cac8I GCNNGC 4 cut(s) 226, 272, 1323, 1486
CaiI CAGNNNCTG 1 cut(s) 264
CciI TCATGA 1 cut(s) 1407
CfoI GCGC 1 cut(s) 1971
Cfr10I RCCGGY 2 cut(s) 274, 456
Cfr42I CCGCGG 2 cut(s) 73, 82
CseI GACGC 2 cut(s) 248, 295
CsiI ACCWGGT 1 cut(s) 318
Csp6I GTAC 2 cut(s) 631, 1844
CspAI ACCGGT 1 cut(s) 456
CviQI GTAC 2 cut(s) 631, 1844
DdeI CTNAG 5 cut(s) 498, 569, 1287, 1750, 1827
EaeI YGGCCR 2 cut(s) 34, 468
EagI CGGCCG 1 cut(s) 468
Eam1104I CTCTTC 2 cut(s) 377, 1535
EarI CTCTTC 2 cut(s) 377, 1535
EciI GGCGGA 3 cut(s) 153, 290, 947
Ecl136II GAGCTC 1 cut(s) 289
EclXI CGGCCG 1 cut(s) 468
Eco24I GRGCYC 4 cut(s) 272, 291, 454, 1773
Eco32I GATATC 1 cut(s) 1653
Eco47I GGWCC 3 cut(s) 148, 331, 340
Eco52I CGGCCG 1 cut(s) 468
Eco53kI GAGCTC 1 cut(s) 289
Eco91I GGTNACC 1 cut(s) 958
EcoICRI GAGCTC 1 cut(s) 289
EcoO109I RGGNCCY 3 cut(s) 148, 268, 331
EcoO65I GGTNACC 1 cut(s) 958
EcoRII CCWGG 2 cut(s) 318, 617
EcoRV GATATC 1 cut(s) 1653
EcoT22I ATGCAT 1 cut(s) 1810
EcoT38I GRGCYC 4 cut(s) 272, 291, 454, 1773
Esp3I CGTCTC 1 cut(s) 286
FalI AAGNNNNNCTT 8 cut(s) 8, 40, 395, 427, 1016, 1048, 1224, 1256
FaqI GGGAC 4 cut(s) 161, 182, 464, 1757
FauI CCCGC 3 cut(s) 199, 233, 279
FbaI TGATCA 2 cut(s) 537, 1167
FokI GGATG 5 cut(s) 218, 659, 769, 896, 947
FriOI GRGCYC 4 cut(s) 272, 291, 454, 1773
FspBI CTAG 2 cut(s) 1455, 1736
GlaI GCGC 1 cut(s) 1970
GsaI CCCAGC 2 cut(s) 127, 268
GsuI CTGGAG 1 cut(s) 275
HaeIII GGCC 8 cut(s) 36, 84, 270, 362, 452, 470, 1246, 1771
HapII CCGG 7 cut(s) 52, 275, 448, 457, 963, 1247, 1741
HgaI GACGC 2 cut(s) 248, 295
HhaI GCGC 1 cut(s) 1971
Hin1I GRCGYC 1 cut(s) 240
Hin6I GCGC 1 cut(s) 1969
HinP1I GCGC 1 cut(s) 1969
HindIII AAGCTT 2 cut(s) 1211, 1620
HinfI GANTC 7 cut(s) 494, 532, 952, 1264, 1404, 1562, 2081
HpaII CCGG 7 cut(s) 52, 275, 448, 457, 963, 1247, 1741
HphI GGTGA 7 cut(s) 301, 667, 719, 823, 871, 1273, 1846
Hpy166II GTNNAC 5 cut(s) 171, 691, 1569, 1874, 2108
Hpy188I TCNGA 7 cut(s) 286, 537, 542, 553, 871, 1167, 1220
Hpy188III TCNNGA 4 cut(s) 292, 1033, 1232, 1408
Hpy8I GTNNAC 5 cut(s) 171, 691, 1569, 1874, 2108
Hpy99I CGWCG 2 cut(s) 242, 1261
HpyCH4III ACNGT 4 cut(s) 67, 525, 1261, 1798
HpyCH4IV ACGT 1 cut(s) 831
HpyCH4V TGCA 6 cut(s) 547, 848, 1325, 1724, 1808, 1861
HpyF10VI GCNNNNNNNGC 6 cut(s) 78, 81, 255, 267, 295, 845
HpyF3I CTNAG 5 cut(s) 498, 569, 1287, 1750, 1827
HpySE526I ACGT 1 cut(s) 831
Hsp92I GRCGYC 1 cut(s) 240
HspAI GCGC 1 cut(s) 1969
KflI GGGWCCC 1 cut(s) 148
Ksp22I TGATCA 2 cut(s) 537, 1167
KspI CCGCGG 2 cut(s) 73, 82
LguI GCTCTTC 1 cut(s) 377
LmnI GCTCC 3 cut(s) 286, 294, 303
Lsp1109I GCAGC 6 cut(s) 87, 270, 1109, 1660, 1719, 1873
LweI GCATC 5 cut(s) 544, 637, 925, 1711, 1848
MabI ACCWGGT 1 cut(s) 318
MaeI CTAG 2 cut(s) 1455, 1736
MaeII ACGT 1 cut(s) 831
MaeIII GTNAC 5 cut(s) 307, 730, 949, 958, 1759
MflI RGATCY 3 cut(s) 1609, 1814, 2044
MhlI GDGCHC 5 cut(s) 272, 291, 454, 1062, 1773
MlsI TGGCCA 1 cut(s) 36
MluCI AATT 8 cut(s) 697, 1159, 1370, 1447, 1496, 1644, 1957, 2016
MluNI TGGCCA 1 cut(s) 36
MlyI GAGTC 4 cut(s) 503, 946, 1413, 1556
MmeI TCCRAC 1 cut(s) 1690
Mox20I TGGCCA 1 cut(s) 36
Mph1103I ATGCAT 1 cut(s) 1810
MroXI GAANNNNTTC 1 cut(s) 1028
MscI TGGCCA 1 cut(s) 36
MseI TTAA 4 cut(s) 612, 1188, 1443, 2015
MslI CAYNNNNRTG 5 cut(s) 552, 585, 848, 1274, 1997
Msp20I TGGCCA 1 cut(s) 36
MspA1I CMGCKG 3 cut(s) 72, 81, 264
MspI CCGG 7 cut(s) 52, 275, 448, 457, 963, 1247, 1741
MspR9I CCNGG 6 cut(s) 52, 320, 449, 619, 964, 1742
Mva1269I GAATGC 1 cut(s) 549
MvaI CCWGG 2 cut(s) 320, 619
MvnI CGCG 3 cut(s) 72, 81, 306
MwoI GCNNNNNNNGC 6 cut(s) 78, 81, 255, 267, 295, 845
NciI CCSGG 4 cut(s) 52, 449, 964, 1742
NlaIV GGNNCC 7 cut(s) 56, 149, 150, 269, 270, 452, 1771
NmeAIII GCCGAG 1 cut(s) 352
NmuCI GTSAC 4 cut(s) 307, 730, 949, 1759
NsiI ATGCAT 1 cut(s) 1810
NspI RCATGY 2 cut(s) 1812, 1915
NspV TTCGAA 1 cut(s) 1367
PagI TCATGA 1 cut(s) 1407
PasI CCCWGGG 1 cut(s) 618
PciSI GCTCTTC 1 cut(s) 377
PctI GAATGC 1 cut(s) 549
PdmI GAANNNNTTC 1 cut(s) 1028
PfeI GAWTC 3 cut(s) 532, 1264, 2081
PflFI GACNNNGTC 3 cut(s) 320, 476, 1403
PfoI TCCNGGA 2 cut(s) 50, 1740
PinAI ACCGGT 1 cut(s) 456
PleI GAGTC 4 cut(s) 502, 946, 1412, 1556
PpsI GAGTC 4 cut(s) 502, 946, 1412, 1556
PpuMI RGGWCCY 2 cut(s) 148, 331
PshBI ATTAAT 1 cut(s) 2015
PsiI TTATAA 1 cut(s) 1979
Psp124BI GAGCTC 1 cut(s) 291
Psp5II RGGWCCY 2 cut(s) 148, 331
Psp6I CCWGG 2 cut(s) 318, 617
PspEI GGTNACC 1 cut(s) 958
PspFI CCCAGC 2 cut(s) 123, 264
PspGI CCWGG 2 cut(s) 318, 617
PspN4I GGNNCC 7 cut(s) 56, 149, 150, 269, 270, 452, 1771
PspOMI GGGCCC 3 cut(s) 268, 450, 1769
PspPPI RGGWCCY 2 cut(s) 148, 331
PstNI CAGNNNCTG 1 cut(s) 264
PsuI RGATCY 3 cut(s) 1609, 1814, 2044
PsyI GACNNNGTC 3 cut(s) 320, 476, 1403
RsaI GTAC 2 cut(s) 632, 1845
RsaNI GTAC 2 cut(s) 631, 1844
RseI CAYNNNNRTG 5 cut(s) 552, 585, 848, 1274, 1997
SacI GAGCTC 1 cut(s) 291
SacII CCGCGG 2 cut(s) 73, 82
SapI GCTCTTC 1 cut(s) 377
SaqAI TTAA 4 cut(s) 612, 1188, 1443, 2015
SchI GAGTC 4 cut(s) 503, 946, 1413, 1556
ScrFI CCNGG 6 cut(s) 52, 320, 449, 619, 964, 1742
SduI GDGCHC 5 cut(s) 272, 291, 454, 1062, 1773
SexAI ACCWGGT 1 cut(s) 318
SfaNI GCATC 5 cut(s) 544, 637, 925, 1711, 1848
Sfr303I CCGCGG 2 cut(s) 73, 82
SfuI TTCGAA 1 cut(s) 1367
SgrBI CCGCGG 2 cut(s) 73, 82
SinI GGWCC 3 cut(s) 148, 331, 340
SmiMI CAYNNNNRTG 5 cut(s) 552, 585, 848, 1274, 1997
SmlI CTYRAG 1 cut(s) 335
SmoI CTYRAG 1 cut(s) 335
Sse9I AATT 8 cut(s) 697, 1159, 1370, 1447, 1496, 1644, 1957, 2016
SspMI CTAG 2 cut(s) 1455, 1736
SstI GAGCTC 1 cut(s) 291
StyD4I CCNGG 6 cut(s) 50, 318, 447, 617, 962, 1740
TaaI ACNGT 4 cut(s) 67, 525, 1261, 1798
TaiI ACGT 1 cut(s) 834
TaqI TCGA 3 cut(s) 132, 237, 1367
TasI AATT 8 cut(s) 697, 1159, 1370, 1447, 1496, 1644, 1957, 2016
TatI WGTACW 2 cut(s) 630, 1843
TauI GCSGC 5 cut(s) 75, 81, 84, 264, 306
TfiI GAWTC 3 cut(s) 532, 1264, 2081
Tru1I TTAA 4 cut(s) 612, 1188, 1443, 2015
Tru9I TTAA 4 cut(s) 612, 1188, 1443, 2015
TscAI CASTG 3 cut(s) 383, 850, 1762
TseFI GTSAC 4 cut(s) 307, 730, 949, 1759
TseI GCWGC 6 cut(s) 75, 258, 1097, 1673, 1732, 1861
Tsp45I GTSAC 4 cut(s) 307, 730, 949, 1759
TspDTI ATGAA 7 cut(s) 220, 611, 795, 1031, 1553, 1632, 2042
TspGWI ACGGA 1 cut(s) 1416
TspRI CASTG 3 cut(s) 383, 850, 1762
Tth111I GACNNNGTC 3 cut(s) 320, 476, 1403
VpaK11BI GGWCC 3 cut(s) 148, 331, 340
VspI ATTAAT 1 cut(s) 2015
XapI RAATTY 3 cut(s) 1370, 1496, 1957
XceI RCATGY 2 cut(s) 1812, 1915
XmnI GAANNNNTTC 1 cut(s) 1028
XspI CTAG 2 cut(s) 1455, 1736
Zsp2I ATGCAT 1 cut(s) 1810
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.