Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0007852

Physical Location & Seq

Genomic Coordinates Forward (+)

2253040 .. 2256049

Gene Structure 3010 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1026900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGCCACCTCAGTCCCCACCCCCTAAATTCCAGATCTTCCACGGCCACCGCAGGCCCACACAGAACCGCCCAACCGTCCGCGGCGGCCTCTTCTCCGACCGTGTCTCTCAGCCGAGCCGCAAATACCCCACCACCGTCACCCAATCCCAGCCATTCGATCTCTCCAAGTGGGACCCACACCTGCCCCAATCCTCGCCGTCCACTTCATCGCCCAACCCCGACGACACGACCCTCCTCTCGTTTCTCTCCCCCATCGCTCGCTTCATACTCGATGCTTTCCGCAAGAACCGGAACCGCTGGGGCCCGCCAGTCGTCTCGGAGCTCCGTAAGCTCCGCCGGGTCACGCCGGACCTCGTCGCCGAGGTGCTCAAGGTCCAGAACGACCCCGTTTCGGCCTCCAAGTTCTTCCACTGGGCAGGTAAGCAAAAGGGTTTCAAGCACACTTATTCTTCATACAATGCCTTGGCTTATTGTCTGAACCGGTCCAACCGGTTCAGGTCGGCGGACCAAGTCCCTGAGCTGATGGACTCGCAGGGCAAACCGCCGAGCGAGAAACAGTTTGAGATTCTCATCAGAATGCACTCTGATGCCAATAGAGGTCTCAGGGTTTATTATGTGTACGAAAAAATGAAGAAATTTGGGGTTAAACCCAGGGTTTTCTTGTACAATAGGATCATGGATGCGTTGGCGAAAACGGGTTATTTGGATTTGGCCTTATCGGTTTACGATGACTTTCGTGATGATGGATTGGTGGAGGAGAGTGTTACTTTCATGATCTTGATAAAGGGTATGTGTAAAATGGGAAGAATTGACGAAATGTTGCAGCTTTTGGAGAGAATGAGGGCGAATTTGTGTAAACCGGACGTGTTTGCATACACGGCAATGGTTAAGGTTTTGCTTTCGGAGGGGAACTTAGATGGATGTTTGAGGGTTTGGGAGGAAATGAAGAGAGATAGGGTTGAGGCTGATGCTATGGCATATGCAACTCTGGTTACAGGGTTGTGTAAGGGTGGCAGGGTGGAGAAAGGGTACGAATTGTTTAGGGAGATGAAGGCGAAGGGTTTCTTGATTGATAGAGTGATATACGGGGTGTTGATTGAGGGGTTTGTGGCAGACAGTAAAGTTGGGGTGGCTTGTGATTTGTTGAAAGATTTGGTGGATTCGGGGTATAGGCCAGATTTGGGGATATATAATTCTCTTATTGAGGGTTTATGTAATGTGAAGCGGGTTGATAAGGCTTATAAAATTTTCCGAGTTACTGTTCAAGAGGGTCTTCAGCCAGATTTCGCTACGGTGAATCCCATTTTGGTGTTCTATGCTGAGACAAGAAAAGTGGATAAGTTCTGCGAGATGCTTGCACAGATGGAGAAATGTGGTTTTCCTGTCATTGACAATCTTTTGAAATTCTTCTCCTTTATTGTAGGAAAGGAGGACGGAGTAACAATGGGTTTGGAAGTGTTTGAAGAGTTAAAAGTCAAAGGTTATTATAGTTTAGGAATCTACAATACCTTTATGGAGGCCCTCCACAAATCTGGGAAAGTGAAAAAAGCATTGTCTCTCTTTAATGAAACGAAGGATGTGGATTTGCAGCCCGACTCCTCTACTTACAGCATTGCCATAATGTGTTTTGTTGAAGGTGGGGACATCCATGAGGCTTGTGCCTGTTATAATAAAATAATTGAGATGTCTTGTGTTCCTTCGATTGCTGCCTACCGTTCGCTTGCTAGAGGGCTTTGTAAAATTGGAGAGATTGATGCAGTTATGCTGTTAGTTCGTGACTGCTTAGCCAGCGTGACAAGTGGGCCCTCGGAATTCAAGTATTCTCTTACCATTCTCCATGCATGTAAATCAAATAATGCTGAGAAGGTGGTTGAGGTGCTAAACGAGATGATACAGCAGGGTTGTCCTCCAGATGATGTTGTATACTCTGCTATAATCTCTGGCATGTGTAAGCATGGCACAATAGAGGAGGCAAGAAAAATATTTTCAAATTTGAAAGAGCACAAAATTTTAACAGAAGCCAACATGATTGTGTATGATGAAGTATTAATTGAACACATGAAGAAGAAGACGGCAGATCTGGTGGTGTCTGGTTTGAAGTTTTTTGGATTAGAAAACAAATTGAAAGCAAAGGGTTGTAAGCTGCTGTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3 PPR_long

Protein Analysis

718

Amino Acids

80.96

Weight (kDa)

8.73

Isoelectric Point (pI)

40.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	151 - 286	3.1e-08	Pentacotripeptide-repeat region of PRORP
TPR_24	PF23276	225 - 349	3.8e-08	Fungal tetratrico peptide repeats
PPR_2	PF13041	254 - 299	1e-10	PPR repeat family
PPR_1	PF12854	254 - 281	3.3e-06	PPR repeat
PPR_long	PF17177	270 - 357	2.3e-06	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	287 - 336	2.6e-10	PPR repeat family
PPR_1	PF12854	320 - 351	1.3e-07	PPR repeat
PPR_2	PF13041	323 - 369	5.9e-08	PPR repeat family
PPR	PF01535	327 - 355	4.6e-06	PPR repeat
PPR_1	PF12854	389 - 418	2.2e-07	PPR repeat
PPR_2	PF13041	392 - 433	7.8e-07	PPR repeat family
PPR_2	PF13041	500 - 543	1.3e-09	PPR repeat family
PPR_2	PF13041	605 - 651	3.1e-09	PPR repeat family
PPR_1	PF12854	634 - 663	4.5e-08	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007852)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20740
fragaria_vesca	FvH4_7g02120 FvH4_7g02120 FvH4_7g02120 FvH4_7g02120 FvH4_7g02120 FvH4_7g02120
malus_domestica	MD02G1297100.v1.1 MD07G1026900.v1.1
prunus_persica	Prupe.2G027000_v2.0.a1 Prupe.2G027000_v2.0.a1
pyrus_communis	pycom02g25030 pycom07g02030 pycom07g02070
rosa_chinensis	RchiOBHm_Chr1g0319391
rosa_laevigata	RLG00000030490
rosa_multiflora	Rmu_sc0005870.1_g000005
rosa_roxburghii	Rroxscaffold_4G00328510
rosa_rugosa	Rorug01G0027200
rosa_samantha	Rh1AG039500 Rh1BG036300 Rh1CG038400 Rh1DG031400
rosa_wichuraiana	Rw1G003160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1242, 1668
AarI	CACCTGC	1 cut(s)	189
Acc36I	ACCTGC	2 cut(s)	189, 407
AccI	GTMKAC	1 cut(s)	1923
AccII	CGCG	1 cut(s)	81
AclWI	GGATC	1 cut(s)	680
AcoI	YGGCCR	1 cut(s)	43
AcsI	RAATTY	8 cut(s)	26, 635, 847, 1245, 1403, 1811, 1990, 2007
AcuI	CTGAAG	1 cut(s)	1259
AfaI	GTAC	3 cut(s)	620, 665, 1031
AfiI	CCNNNNNNNGG	2 cut(s)	391, 1181
AflIII	ACRYGT	1 cut(s)	864
AgeI	ACCGGT	2 cut(s)	480, 489
AjiI	CACGTC	1 cut(s)	865
AjnI	CCWGG	1 cut(s)	650
AjuI	GAANNNNNNNTTGG	2 cut(s)	1289, 1321
AluBI	AGCT	5 cut(s)	322, 331, 520, 826, 2143
AluI	AGCT	5 cut(s)	322, 331, 520, 826, 2143
Alw21I	GWGCWC	3 cut(s)	324, 369, 2004
Alw26I	GTCTC	5 cut(s)	109, 319, 605, 1316, 1560
AlwI	GGATC	1 cut(s)	680
AoxI	GGCC	9 cut(s)	43, 53, 85, 301, 393, 711, 1172, 1518, 1802
ApaI	GGGCCC	2 cut(s)	305, 1806
ApeKI	GCWGC	4 cut(s)	823, 1588, 1706, 2143
ApoI	RAATTY	8 cut(s)	26, 635, 847, 1245, 1403, 1811, 1990, 2007
AseI	ATTAAT	1 cut(s)	2048
AsiGI	ACCGGT	2 cut(s)	480, 489
Asp700I	GAANNNNTTC	2 cut(s)	1061, 1406
AsuC2I	CCSGG	1 cut(s)	338
AsuHPI	GGTGA	2 cut(s)	130, 1306
AvaII	GGWCC	5 cut(s)	172, 349, 373, 483, 505
BaeGI	GKGCMC	2 cut(s)	305, 1806
BanII	GRGCYC	3 cut(s)	305, 324, 1806
BbsI	GAAGAC	2 cut(s)	1265, 2075
Bbv12I	GWGCWC	3 cut(s)	324, 369, 2004
BbvI	GCAGC	4 cut(s)	835, 1600, 1693, 2130
BccI	CCATC	5 cut(s)	260, 517, 737, 911, 1357
BceAI	ACGGC	4 cut(s)	58, 181, 894, 2088
BcgI	CGANNNNNNTGC	2 cut(s)	1337, 1371
BciT130I	CCWGG	1 cut(s)	652
BcnI	CCSGG	1 cut(s)	338
BcoDI	GTCTC	5 cut(s)	109, 319, 605, 1316, 1560
BfaI	CTAG	1 cut(s)	1725
BfuAI	ACCTGC	2 cut(s)	189, 407
BglII	AGATCT	2 cut(s)	33, 2077
BisI	GCNGC	7 cut(s)	82, 85, 118, 824, 1589, 1707, 2144
BlpI	GCTNAGC	1 cut(s)	1783
BlsI	GCNGC	7 cut(s)	83, 86, 119, 825, 1590, 1708, 2145
Bme1390I	CCNGG	2 cut(s)	338, 652
Bme18I	GGWCC	5 cut(s)	172, 349, 373, 483, 505
BmgBI	CACGTC	1 cut(s)	865
BmiI	GGNNCC	6 cut(s)	173, 174, 293, 302, 303, 1804
BmrFI	CCNGG	2 cut(s)	338, 652
BmrI	ACTGGG	1 cut(s)	421
BmsI	GCATC	6 cut(s)	262, 577, 670, 958, 1341, 1744
BmuI	ACTGGG	1 cut(s)	421
BpiI	GAAGAC	2 cut(s)	1265, 2075
BpmI	CTGGAG	1 cut(s)	1893
Bpu10I	CCTNAGC	1 cut(s)	516
Bpu1102I	GCTNAGC	1 cut(s)	1783
BpuEI	CTTGAG	1 cut(s)	353
BpuMI	CCSGG	1 cut(s)	338
BsaBI	GATNNNNATC	1 cut(s)	569
BsaI	GGTCTC	1 cut(s)	605
BsaJI	CCNNGG	7 cut(s)	40, 79, 360, 462, 650, 651, 1806
BsaWI	WCCGGW	4 cut(s)	288, 480, 489, 859
BsaXI	ACNNNNNCTCC	2 cut(s)	1013, 1043
Bsc4I	CCNNNNNNNGG	2 cut(s)	391, 1181
Bse118I	RCCGGY	2 cut(s)	480, 489
Bse1I	ACTGG	2 cut(s)	308, 416
Bse3DI	GCAATG	2 cut(s)	888, 1611
Bse8I	GATNNNNATC	1 cut(s)	569
BseBI	CCWGG	1 cut(s)	652
BseDI	CCNNGG	7 cut(s)	40, 79, 360, 462, 650, 651, 1806
BseGI	GGATG	4 cut(s)	685, 926, 1582, 1644
BseJI	GATNNNNATC	1 cut(s)	569
BseLI	CCNNNNNNNGG	2 cut(s)	391, 1181
BseMI	GCAATG	2 cut(s)	888, 1611
BseMII	CTCAG	6 cut(s)	23, 122, 507, 616, 1311, 1851
BseNI	ACTGG	2 cut(s)	308, 416
BseRI	GAGGAG	4 cut(s)	224, 770, 1588, 1982
BseSI	GKGCMC	2 cut(s)	305, 1806
BseXI	GCAGC	4 cut(s)	835, 1600, 1693, 2130
BseYI	CCCAGC	2 cut(s)	147, 297
Bsh1236I	CGCG	1 cut(s)	81
Bsh1285I	CGRYCG	1 cut(s)	100
BshFI	GGCC	9 cut(s)	45, 55, 87, 303, 395, 713, 1174, 1520, 1804
BshTI	ACCGGT	2 cut(s)	480, 489
BsiEI	CGRYCG	1 cut(s)	100
BsiHKAI	GWGCWC	3 cut(s)	324, 369, 2004
BsiSI	CCGG	6 cut(s)	289, 337, 347, 481, 490, 860
BslFI	GGGAC	3 cut(s)	185, 497, 1655
BslI	CCNNNNNNNGG	2 cut(s)	391, 1181
BsmAI	GTCTC	5 cut(s)	109, 319, 605, 1316, 1560
BsmBI	CGTCTC	1 cut(s)	319
BsmFI	GGGAC	3 cut(s)	185, 497, 1655
BsmI	GAATGC	1 cut(s)	582
BsnI	GGCC	9 cut(s)	45, 55, 87, 303, 395, 713, 1174, 1520, 1804
Bso31I	GGTCTC	1 cut(s)	605
Bsp120I	GGGCCC	2 cut(s)	301, 1802
Bsp1286I	GDGCHC	5 cut(s)	305, 324, 369, 1806, 2004
Bsp1407I	TGTACA	1 cut(s)	663
Bsp143I	GATC	5 cut(s)	33, 157, 672, 774, 2077
Bsp1720I	GCTNAGC	1 cut(s)	1783
BspANI	GGCC	9 cut(s)	45, 55, 87, 303, 395, 713, 1174, 1520, 1804
BspCNI	CTCAG	6 cut(s)	22, 121, 508, 615, 1312, 1852
BspFNI	CGCG	1 cut(s)	81
BspHI	TCATGA	1 cut(s)	771
BspLI	GGNNCC	6 cut(s)	173, 174, 293, 302, 303, 1804
BspMI	ACCTGC	2 cut(s)	189, 407
BspPI	GGATC	1 cut(s)	680
BspTNI	GGTCTC	1 cut(s)	605
BsrDI	GCAATG	2 cut(s)	888, 1611
BsrFI	RCCGGY	2 cut(s)	480, 489
BsrGI	TGTACA	1 cut(s)	663
BsrI	ACTGG	2 cut(s)	308, 416
BssAI	RCCGGY	2 cut(s)	480, 489
BssECI	CCNNGG	7 cut(s)	40, 79, 360, 462, 650, 651, 1806
BssMI	GATC	5 cut(s)	33, 157, 672, 774, 2077
BssNAI	GTATAC	1 cut(s)	1924
BssT1I	CCWWGG	1 cut(s)	462
Bst1107I	GTATAC	1 cut(s)	1924
Bst2UI	CCWGG	1 cut(s)	652
Bst4CI	ACNGT	8 cut(s)	76, 101, 136, 558, 1118, 1261, 1294, 1715
Bst6I	CTCTTC	3 cut(s)	95, 941, 1458
BstAUI	TGTACA	1 cut(s)	663
BstC8I	GCNNGC	6 cut(s)	53, 259, 305, 1356, 1722, 1789
BstDEI	CTNAG	8 cut(s)	9, 108, 516, 602, 913, 1320, 1783, 1860
BstDSI	CCRYGG	2 cut(s)	40, 79
BstF5I	GGATG	4 cut(s)	685, 926, 1582, 1644
BstFNI	CGCG	1 cut(s)	81
BstKTI	GATC	5 cut(s)	36, 160, 675, 777, 2080
BstMAI	GTCTC	5 cut(s)	109, 319, 605, 1316, 1560
BstMBI	GATC	5 cut(s)	33, 157, 672, 774, 2077
BstMCI	CGRYCG	1 cut(s)	100
BstMWI	GCNNNNNNNGC	3 cut(s)	328, 878, 1788
BstNI	CCWGG	1 cut(s)	652
BstNSI	RCATGY	2 cut(s)	1845, 1948
BstSCI	CCNGG	2 cut(s)	336, 650
BstSLI	GKGCMC	2 cut(s)	305, 1806
BstUI	CGCG	1 cut(s)	81
BstV1I	GCAGC	4 cut(s)	835, 1600, 1693, 2130
BstV2I	GAAGAC	2 cut(s)	1265, 2075
BstX2I	RGATCY	2 cut(s)	33, 2077
BstXI	CCANNNNNNTGG	1 cut(s)	1532
BstYI	RGATCY	2 cut(s)	33, 2077
BstZ17I	GTATAC	1 cut(s)	1924
BsuRI	GGCC	9 cut(s)	45, 55, 87, 303, 395, 713, 1174, 1520, 1804
BtgI	CCRYGG	2 cut(s)	40, 79
BtgZI	GCGATG	2 cut(s)	192, 238
BtrI	CACGTC	1 cut(s)	865
BtsCI	GGATG	4 cut(s)	685, 926, 1582, 1644
BtsIMutI	CAGTG	1 cut(s)	409
BveI	ACCTGC	2 cut(s)	189, 407
Cac8I	GCNNGC	6 cut(s)	53, 259, 305, 1356, 1722, 1789
CciI	TCATGA	1 cut(s)	771
Cfr10I	RCCGGY	2 cut(s)	480, 489
Cfr42I	CCGCGG	1 cut(s)	82
Csp6I	GTAC	3 cut(s)	619, 664, 1030
CspAI	ACCGGT	2 cut(s)	480, 489
CspCI	CAANNNNNGTGG	2 cut(s)	1314, 1349
CviAII	CATG	9 cut(s)	676, 772, 1649, 1838, 1842, 1945, 1955, 2026, 2059
CviQI	GTAC	3 cut(s)	619, 664, 1030
DdeI	CTNAG	8 cut(s)	9, 108, 516, 602, 913, 1320, 1783, 1860
DpnI	GATC	5 cut(s)	35, 159, 674, 776, 2079
DpnII	GATC	5 cut(s)	33, 157, 672, 774, 2077
EaeI	YGGCCR	1 cut(s)	43
Eam1104I	CTCTTC	3 cut(s)	95, 941, 1458
EarI	CTCTTC	3 cut(s)	95, 941, 1458
EciI	GGCGGA	2 cut(s)	323, 518
Ecl136II	GAGCTC	1 cut(s)	322
Eco130I	CCWWGG	1 cut(s)	462
Eco24I	GRGCYC	3 cut(s)	305, 324, 1806
Eco31I	GGTCTC	1 cut(s)	605
Eco47I	GGWCC	5 cut(s)	172, 349, 373, 483, 505
Eco53kI	GAGCTC	1 cut(s)	322
Eco57I	CTGAAG	1 cut(s)	1259
EcoICRI	GAGCTC	1 cut(s)	322
EcoO109I	RGGNCCY	4 cut(s)	172, 301, 1519, 1803
EcoRI	GAATTC	1 cut(s)	1811
EcoRII	CCWGG	1 cut(s)	650
EcoT14I	CCWWGG	1 cut(s)	462
EcoT22I	ATGCAT	1 cut(s)	1843
EcoT38I	GRGCYC	3 cut(s)	305, 324, 1806
ErhI	CCWWGG	1 cut(s)	462
Esp3I	CGTCTC	1 cut(s)	319
FaeI	CATG	9 cut(s)	679, 775, 1652, 1841, 1845, 1948, 1958, 2029, 2062
FalI	AAGNNNNNCTT	4 cut(s)	1049, 1081, 1257, 1289
FaqI	GGGAC	3 cut(s)	185, 497, 1655
FatI	CATG	9 cut(s)	675, 771, 1648, 1837, 1841, 1944, 1954, 2025, 2058
FauI	CCCGC	2 cut(s)	312, 1218
FauNDI	CATATG	1 cut(s)	979
FblI	GTMKAC	1 cut(s)	1923
Fnu4HI	GCNGC	7 cut(s)	82, 85, 118, 824, 1589, 1707, 2144
FokI	GGATG	4 cut(s)	692, 933, 1589, 1631
FriOI	GRGCYC	3 cut(s)	305, 324, 1806
Fsp4HI	GCNGC	7 cut(s)	82, 85, 118, 824, 1589, 1707, 2144
FspBI	CTAG	1 cut(s)	1725
GluI	GCNGC	7 cut(s)	82, 85, 118, 824, 1589, 1707, 2144
GsaI	CCCAGC	2 cut(s)	151, 301
GsuI	CTGGAG	1 cut(s)	1893
HaeIII	GGCC	9 cut(s)	45, 55, 87, 303, 395, 713, 1174, 1520, 1804
HapII	CCGG	6 cut(s)	289, 337, 347, 481, 490, 860
Hin1II	CATG	9 cut(s)	679, 775, 1652, 1841, 1845, 1948, 1958, 2029, 2062
HinfI	GANTC	6 cut(s)	527, 565, 1160, 1297, 1497, 1595
HpaII	CCGG	6 cut(s)	289, 337, 347, 481, 490, 860
HphI	GGTGA	2 cut(s)	130, 1306
Hpy166II	GTNNAC	5 cut(s)	201, 619, 724, 857, 1924
Hpy188I	TCNGA	8 cut(s)	97, 319, 477, 575, 586, 904, 1253, 1810
Hpy188III	TCNNGA	9 cut(s)	31, 376, 737, 772, 778, 1066, 1265, 1775, 1910
Hpy8I	GTNNAC	5 cut(s)	201, 619, 724, 857, 1924
Hpy99I	CGWCG	2 cut(s)	224, 359
HpyAV	CCTTC	6 cut(s)	1045, 1051, 1567, 1628, 1707, 1858
HpyCH4III	ACNGT	8 cut(s)	76, 101, 136, 558, 1118, 1261, 1294, 1715
HpyCH4IV	ACGT	1 cut(s)	864
HpyCH4V	TGCA	8 cut(s)	580, 823, 872, 983, 1358, 1588, 1757, 1841
HpyF10VI	GCNNNNNNNGC	3 cut(s)	328, 878, 1788
HpyF3I	CTNAG	8 cut(s)	9, 108, 516, 602, 913, 1320, 1783, 1860
HpySE526I	ACGT	1 cut(s)	864
Hsp92II	CATG	9 cut(s)	679, 775, 1652, 1841, 1845, 1948, 1958, 2029, 2062
KflI	GGGWCCC	1 cut(s)	172
KspI	CCGCGG	1 cut(s)	82
Kzo9I	GATC	5 cut(s)	33, 157, 672, 774, 2077
LmnI	GCTCC	3 cut(s)	319, 327, 336
Lsp1109I	GCAGC	4 cut(s)	835, 1600, 1693, 2130
LweI	GCATC	6 cut(s)	262, 577, 670, 958, 1341, 1744
MaeI	CTAG	1 cut(s)	1725
MaeII	ACGT	1 cut(s)	864
MaeIII	GTNAC	8 cut(s)	136, 340, 763, 991, 1255, 1438, 1775, 1792
MalI	GATC	5 cut(s)	35, 159, 674, 776, 2079
MboI	GATC	5 cut(s)	33, 157, 672, 774, 2077
MflI	RGATCY	2 cut(s)	33, 2077
MhlI	GDGCHC	5 cut(s)	305, 324, 369, 1806, 2004
MlyI	GAGTC	2 cut(s)	521, 1589
MmeI	TCCRAC	2 cut(s)	120, 510
Mph1103I	ATGCAT	1 cut(s)	1843
MroXI	GAANNNNTTC	2 cut(s)	1061, 1406
MseI	TTAA	6 cut(s)	645, 888, 1469, 1563, 2012, 2048
MslI	CAYNNNNRTG	5 cut(s)	575, 585, 881, 1307, 2030
MspA1I	CMGCKG	2 cut(s)	81, 297
MspI	CCGG	6 cut(s)	289, 337, 347, 481, 490, 860
MspR9I	CCNGG	2 cut(s)	338, 652
Mva1269I	GAATGC	1 cut(s)	582
MvaI	CCWGG	1 cut(s)	652
MvnI	CGCG	1 cut(s)	81
MwoI	GCNNNNNNNGC	3 cut(s)	328, 878, 1788
NciI	CCSGG	1 cut(s)	338
NdeI	CATATG	1 cut(s)	979
NdeII	GATC	5 cut(s)	33, 157, 672, 774, 2077
NlaIII	CATG	9 cut(s)	679, 775, 1652, 1841, 1845, 1948, 1958, 2029, 2062
NlaIV	GGNNCC	6 cut(s)	173, 174, 293, 302, 303, 1804
NmeAIII	GCCGAG	3 cut(s)	138, 385, 570
NmuCI	GTSAC	4 cut(s)	136, 340, 1775, 1792
NsiI	ATGCAT	1 cut(s)	1843
NspI	RCATGY	2 cut(s)	1845, 1948
PagI	TCATGA	1 cut(s)	771
PaqCI	CACCTGC	1 cut(s)	189
PasI	CCCWGGG	1 cut(s)	651
PctI	GAATGC	1 cut(s)	582
PdmI	GAANNNNTTC	2 cut(s)	1061, 1406
PfeI	GAWTC	4 cut(s)	565, 1160, 1297, 1497
PflFI	GACNNNGTC	3 cut(s)	101, 353, 509
PinAI	ACCGGT	2 cut(s)	480, 489
PkrI	GCNGC	7 cut(s)	83, 86, 119, 825, 1590, 1708, 2145
PleI	GAGTC	2 cut(s)	521, 1589
PpsI	GAGTC	2 cut(s)	521, 1589
PpuMI	RGGWCCY	1 cut(s)	172
PshBI	ATTAAT	1 cut(s)	2048
PsiI	TTATAA	2 cut(s)	1242, 1668
Psp124BI	GAGCTC	1 cut(s)	324
Psp5II	RGGWCCY	1 cut(s)	172
Psp6I	CCWGG	1 cut(s)	650
PspFI	CCCAGC	2 cut(s)	147, 297
PspGI	CCWGG	1 cut(s)	650
PspN4I	GGNNCC	6 cut(s)	173, 174, 293, 302, 303, 1804
PspOMI	GGGCCC	2 cut(s)	301, 1802
PspPPI	RGGWCCY	1 cut(s)	172
PsuI	RGATCY	2 cut(s)	33, 2077
PsyI	GACNNNGTC	3 cut(s)	101, 353, 509
RsaI	GTAC	3 cut(s)	620, 665, 1031
RsaNI	GTAC	3 cut(s)	619, 664, 1030
RseI	CAYNNNNRTG	5 cut(s)	575, 585, 881, 1307, 2030
SacI	GAGCTC	1 cut(s)	324
SacII	CCGCGG	1 cut(s)	82
SaqAI	TTAA	6 cut(s)	645, 888, 1469, 1563, 2012, 2048
SatI	GCNGC	7 cut(s)	82, 85, 118, 824, 1589, 1707, 2144
Sau3AI	GATC	5 cut(s)	33, 157, 672, 774, 2077
SchI	GAGTC	2 cut(s)	521, 1589
ScrFI	CCNGG	2 cut(s)	338, 652
SduI	GDGCHC	5 cut(s)	305, 324, 369, 1806, 2004
SfaNI	GCATC	6 cut(s)	262, 577, 670, 958, 1341, 1744
Sfr303I	CCGCGG	1 cut(s)	82
SgrBI	CCGCGG	1 cut(s)	82
SinI	GGWCC	5 cut(s)	172, 349, 373, 483, 505
SmiMI	CAYNNNNRTG	5 cut(s)	575, 585, 881, 1307, 2030
SmlI	CTYRAG	1 cut(s)	368
SmoI	CTYRAG	1 cut(s)	368
SspI	AATATT	1 cut(s)	1983
SspMI	CTAG	1 cut(s)	1725
SstI	GAGCTC	1 cut(s)	324
StyD4I	CCNGG	2 cut(s)	336, 650
StyI	CCWWGG	1 cut(s)	462
TaaI	ACNGT	8 cut(s)	76, 101, 136, 558, 1118, 1261, 1294, 1715
TaiI	ACGT	1 cut(s)	867
TaqI	TCGA	3 cut(s)	156, 270, 1700
TatI	WGTACW	1 cut(s)	663
TauI	GCSGC	3 cut(s)	84, 87, 120
TfiI	GAWTC	4 cut(s)	565, 1160, 1297, 1497
Tru1I	TTAA	6 cut(s)	645, 888, 1469, 1563, 2012, 2048
Tru9I	TTAA	6 cut(s)	645, 888, 1469, 1563, 2012, 2048
TscAI	CASTG	1 cut(s)	416
TseFI	GTSAC	4 cut(s)	136, 340, 1775, 1792
TseI	GCWGC	4 cut(s)	823, 1588, 1706, 2143
Tsp45I	GTSAC	4 cut(s)	136, 340, 1775, 1792
TspGWI	ACGGA	2 cut(s)	314, 1449
TspRI	CASTG	1 cut(s)	416
Tth111I	GACNNNGTC	3 cut(s)	101, 353, 509
VpaK11BI	GGWCC	5 cut(s)	172, 349, 373, 483, 505
VspI	ATTAAT	1 cut(s)	2048
XapI	RAATTY	8 cut(s)	26, 635, 847, 1245, 1403, 1811, 1990, 2007
XceI	RCATGY	2 cut(s)	1845, 1948
XmiI	GTMKAC	1 cut(s)	1923
XmnI	GAANNNNTTC	2 cut(s)	1061, 1406
XspI	CTAG	1 cut(s)	1725
Zsp2I	ATGCAT	1 cut(s)	1843

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.