hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G55850 AT3G55850 AT3G55850 AT3G55850 AT3G55850 AT3G55850 |
| fragaria_vesca | FvH4_7g03070 |
| malus_domestica | MD07G1040200.v1.1 |
| prunus_persica | Prupe.2G036100_v2.0.a1 |
| pyrus_communis | pycom07g02780 |
| rosa_chinensis | RchiOBHm_Chr1g0324291 |
| rosa_laevigata | RLG00000030207 |
| rosa_multiflora | Rmu_sc0001850.1_g000050 Rmu_sc0031226.1_g000001 |
| rosa_roxburghii | Rroxscaffold_159G00432670 Rroxscaffold_4G00325720 |
| rosa_rugosa | Rorug01G0044600 Rorug01G0044700 Rorug01G0044800 |
| rosa_samantha | Rh1AG060700 Rh1BG051900 Rh1CG063000 Rh1DG067400 Rh4AG012000 |
| rosa_wichuraiana | Rw1G005170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 492, 1445 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 107, 1084 |
| AatII | GACGTC | 1 cut(s) | 89 |
| AccB1I | GGYRCC | 1 cut(s) | 1237 |
| AccBSI | CCGCTC | 1 cut(s) | 697 |
| AccI | GTMKAC | 4 cut(s) | 135, 1419, 1532, 1830 |
| AccII | CGCG | 1 cut(s) | 1980 |
| AccIII | TCCGGA | 1 cut(s) | 1874 |
| AcoI | YGGCCR | 4 cut(s) | 153, 165, 1409, 2483 |
| AcsI | RAATTY | 6 cut(s) | 359, 1760, 2298, 2464, 2641, 2768 |
| AcuI | CTGAAG | 2 cut(s) | 1088, 1257 |
| AcyI | GRCGYC | 3 cut(s) | 86, 785, 1085 |
| AfaI | GTAC | 3 cut(s) | 1278, 1614, 2126 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 72, 593, 738, 1081, 1436, 1473, 1474, 2205, 2698 |
| AflIII | ACRYGT | 2 cut(s) | 1155, 1978 |
| AgsI | TTSAA | 7 cut(s) | 510, 1176, 1768, 1843, 2219, 2470, 2768 |
| AhlI | ACTAGT | 1 cut(s) | 2633 |
| AjnI | CCWGG | 5 cut(s) | 271, 407, 800, 1468, 1588 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1380, 1412 |
| Alw21I | GWGCWC | 3 cut(s) | 1000, 1290, 2230 |
| Alw26I | GTCTC | 4 cut(s) | 93, 878, 1070, 2139 |
| Alw44I | GTGCAC | 1 cut(s) | 996 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 864, 1225 |
| Ama87I | CYCGRG | 3 cut(s) | 779, 1548, 2138 |
| Aor13HI | TCCGGA | 1 cut(s) | 1874 |
| AoxI | GGCC | 4 cut(s) | 153, 165, 1409, 2483 |
| ApaLI | GTGCAC | 1 cut(s) | 996 |
| ApeKI | GCWGC | 5 cut(s) | 1544, 1695, 2525, 2534, 2600 |
| ApoI | RAATTY | 6 cut(s) | 359, 1760, 2298, 2464, 2641, 2768 |
| AseI | ATTAAT | 2 cut(s) | 1425, 1665 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1738 |
| AspLEI | GCGC | 1 cut(s) | 2554 |
| AspS9I | GGNCC | 1 cut(s) | 234 |
| AsuC2I | CCSGG | 2 cut(s) | 780, 781 |
| AsuHPI | GGTGA | 3 cut(s) | 1139, 1580, 1876 |
| AsuII | TTCGAA | 1 cut(s) | 2705 |
| AvaI | CYCGRG | 3 cut(s) | 779, 1548, 2138 |
| AvaII | GGWCC | 1 cut(s) | 234 |
| BaeGI | GKGCMC | 4 cut(s) | 1000, 1240, 1342, 1784 |
| BalI | TGGCCA | 1 cut(s) | 2485 |
| BamHI | GGATCC | 1 cut(s) | 583 |
| BanI | GGYRCC | 1 cut(s) | 1237 |
| BanII | GRGCYC | 2 cut(s) | 1492, 2230 |
| BauI | CACGAG | 1 cut(s) | 2030 |
| BbsI | GAAGAC | 2 cut(s) | 2366, 2574 |
| Bbv12I | GWGCWC | 3 cut(s) | 1000, 1290, 2230 |
| BbvCI | CCTCAGC | 1 cut(s) | 2016 |
| BbvI | GCAGC | 5 cut(s) | 1531, 1707, 2521, 2537, 2587 |
| BccI | CCATC | 6 cut(s) | 512, 608, 968, 1559, 2884, 2891 |
| BceAI | ACGGC | 4 cut(s) | 152, 997, 1464, 1777 |
| BciT130I | CCWGG | 5 cut(s) | 273, 409, 802, 1470, 1590 |
| BciVI | GTATCC | 1 cut(s) | 1455 |
| BclI | TGATCA | 3 cut(s) | 855, 2413, 2497 |
| BcnI | CCSGG | 2 cut(s) | 780, 781 |
| BcoDI | GTCTC | 4 cut(s) | 93, 878, 1070, 2139 |
| BcuI | ACTAGT | 1 cut(s) | 2633 |
| BfaI | CTAG | 4 cut(s) | 1905, 2615, 2634, 2840 |
| BfmI | CTRYAG | 3 cut(s) | 314, 1122, 2853 |
| BfuI | GTATCC | 1 cut(s) | 1455 |
| BglII | AGATCT | 1 cut(s) | 247 |
| BisI | GCNGC | 7 cut(s) | 96, 1545, 1696, 2013, 2526, 2535, 2601 |
| BlpI | GCTNAGC | 1 cut(s) | 1218 |
| BlsI | GCNGC | 7 cut(s) | 97, 1546, 1697, 2014, 2527, 2536, 2602 |
| Bme1390I | CCNGG | 7 cut(s) | 273, 409, 780, 781, 802, 1470, 1590 |
| Bme18I | GGWCC | 1 cut(s) | 234 |
| BmeT110I | CYCGRG | 3 cut(s) | 779, 1548, 2138 |
| BmgT120I | GGNCC | 1 cut(s) | 234 |
| BmiI | GGNNCC | 8 cut(s) | 199, 235, 406, 585, 598, 1239, 1491, 2049 |
| BmrFI | CCNGG | 7 cut(s) | 273, 409, 780, 781, 802, 1470, 1590 |
| BpiI | GAAGAC | 2 cut(s) | 2366, 2574 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1984, 2016, 2009, 2041 |
| BpmI | CTGGAG | 2 cut(s) | 902, 1476 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2016, 2595 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1218 |
| Bpu14I | TTCGAA | 1 cut(s) | 2705 |
| BpuEI | CTTGAG | 1 cut(s) | 536 |
| BpuMI | CCSGG | 2 cut(s) | 780, 781 |
| BsaAI | YACGTR | 1 cut(s) | 902 |
| BsaBI | GATNNNNATC | 3 cut(s) | 822, 854, 1657 |
| BsaHI | GRCGYC | 3 cut(s) | 86, 785, 1085 |
| BsaWI | WCCGGW | 1 cut(s) | 1874 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 875, 905 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 72, 593, 738, 1081, 1436, 1473, 1474, 2205, 2698 |
| Bse118I | RCCGGY | 1 cut(s) | 1411 |
| Bse1I | ACTGG | 8 cut(s) | 70, 615, 634, 885, 937, 1363, 1412, 1602 |
| Bse3DI | GCAATG | 4 cut(s) | 1387, 1458, 2007, 2280 |
| Bse8I | GATNNNNATC | 3 cut(s) | 822, 854, 1657 |
| BseAI | TCCGGA | 1 cut(s) | 1874 |
| BseBI | CCWGG | 5 cut(s) | 273, 409, 802, 1470, 1590 |
| BseGI | GGATG | 7 cut(s) | 361, 523, 1639, 1658, 1695, 2026, 2902 |
| BseJI | GATNNNNATC | 3 cut(s) | 822, 854, 1657 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 72, 593, 738, 1081, 1436, 1473, 1474, 2205, 2698 |
| BseMI | GCAATG | 4 cut(s) | 1387, 1458, 2007, 2280 |
| BseMII | CTCAG | 5 cut(s) | 42, 1232, 1744, 2007, 2256 |
| BseNI | ACTGG | 8 cut(s) | 70, 615, 634, 885, 937, 1363, 1412, 1602 |
| BseRI | GAGGAG | 7 cut(s) | 14, 196, 707, 1735, 1776, 1793, 2681 |
| BseSI | GKGCMC | 4 cut(s) | 1000, 1240, 1342, 1784 |
| BseXI | GCAGC | 5 cut(s) | 1531, 1707, 2521, 2537, 2587 |
| BseYI | CCCAGC | 2 cut(s) | 1097, 1573 |
| Bsh1236I | CGCG | 1 cut(s) | 1980 |
| BshFI | GGCC | 4 cut(s) | 155, 167, 1411, 2485 |
| BshNI | GGYRCC | 1 cut(s) | 1237 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1000, 1290, 2230 |
| BsiHKCI | CYCGRG | 3 cut(s) | 779, 1548, 2138 |
| BsiSI | CCGG | 4 cut(s) | 92, 780, 1412, 1875 |
| BslFI | GGGAC | 5 cut(s) | 247, 254, 1570, 1737, 2337 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 72, 593, 738, 1081, 1436, 1473, 1474, 2205, 2698 |
| BsmAI | GTCTC | 4 cut(s) | 93, 878, 1070, 2139 |
| BsmBI | CGTCTC | 2 cut(s) | 93, 2139 |
| BsmFI | GGGAC | 5 cut(s) | 247, 254, 1570, 1737, 2337 |
| BsmI | GAATGC | 2 cut(s) | 121, 2038 |
| BsnI | GGCC | 4 cut(s) | 155, 167, 1411, 2485 |
| BsoBI | CYCGRG | 3 cut(s) | 779, 1548, 2138 |
| Bsp119I | TTCGAA | 1 cut(s) | 2705 |
| Bsp1286I | GDGCHC | 7 cut(s) | 1000, 1240, 1290, 1342, 1492, 1784, 2230 |
| Bsp13I | TCCGGA | 1 cut(s) | 1874 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1218 |
| Bsp19I | CCATGG | 3 cut(s) | 162, 1721, 2951 |
| BspANI | GGCC | 4 cut(s) | 155, 167, 1411, 2485 |
| BspCNI | CTCAG | 5 cut(s) | 41, 1231, 1743, 2008, 2255 |
| BspEI | TCCGGA | 1 cut(s) | 1874 |
| BspFNI | CGCG | 1 cut(s) | 1980 |
| BspHI | TCATGA | 2 cut(s) | 603, 1006 |
| BspLI | GGNNCC | 8 cut(s) | 199, 235, 406, 585, 598, 1239, 1491, 2049 |
| BspMAI | CTGCAG | 1 cut(s) | 318 |
| BspT104I | TTCGAA | 1 cut(s) | 2705 |
| BspT107I | GGYRCC | 1 cut(s) | 1237 |
| BsrBI | CCGCTC | 1 cut(s) | 697 |
| BsrDI | GCAATG | 4 cut(s) | 1387, 1458, 2007, 2280 |
| BsrFI | RCCGGY | 1 cut(s) | 1411 |
| BsrI | ACTGG | 8 cut(s) | 70, 615, 634, 885, 937, 1363, 1412, 1602 |
| BssAI | RCCGGY | 1 cut(s) | 1411 |
| BssNAI | GTATAC | 1 cut(s) | 1533 |
| BssNI | GRCGYC | 3 cut(s) | 86, 785, 1085 |
| BssSI | CACGAG | 1 cut(s) | 2030 |
| BssT1I | CCWWGG | 5 cut(s) | 150, 162, 1080, 1721, 2951 |
| Bst1107I | GTATAC | 1 cut(s) | 1533 |
| Bst2BI | CACGAG | 1 cut(s) | 2030 |
| Bst2UI | CCWGG | 5 cut(s) | 273, 409, 802, 1470, 1590 |
| Bst4CI | ACNGT | 6 cut(s) | 133, 636, 754, 1779, 1835, 2573 |
| Bst6I | CTCTTC | 3 cut(s) | 175, 1744, 2125 |
| BstACI | GRCGYC | 3 cut(s) | 86, 785, 1085 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 322, 1118, 2534 |
| BstBAI | YACGTR | 1 cut(s) | 902 |
| BstBI | TTCGAA | 1 cut(s) | 2705 |
| BstC8I | GCNNGC | 7 cut(s) | 721, 1215, 1555, 1922, 2586, 2661, 2674 |
| BstDEI | CTNAG | 9 cut(s) | 28, 251, 1218, 1730, 2016, 2242, 2459, 2595, 2810 |
| BstDSI | CCRYGG | 3 cut(s) | 162, 1721, 2951 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 736 |
| BstF5I | GGATG | 7 cut(s) | 361, 523, 1639, 1658, 1695, 2026, 2902 |
| BstFNI | CGCG | 1 cut(s) | 1980 |
| BstHHI | GCGC | 1 cut(s) | 2554 |
| BstMAI | GTCTC | 4 cut(s) | 93, 878, 1070, 2139 |
| BstNI | CCWGG | 5 cut(s) | 273, 409, 802, 1470, 1590 |
| BstNSI | RCATGY | 3 cut(s) | 1159, 1217, 1557 |
| BstSCI | CCNGG | 7 cut(s) | 271, 407, 778, 779, 800, 1468, 1588 |
| BstSFI | CTRYAG | 3 cut(s) | 314, 1122, 2853 |
| BstSLI | GKGCMC | 4 cut(s) | 1000, 1240, 1342, 1784 |
| BstUI | CGCG | 1 cut(s) | 1980 |
| BstV1I | GCAGC | 5 cut(s) | 1531, 1707, 2521, 2537, 2587 |
| BstV2I | GAAGAC | 2 cut(s) | 2366, 2574 |
| BstX2I | RGATCY | 5 cut(s) | 247, 583, 1349, 1577, 1652 |
| BstYI | RGATCY | 5 cut(s) | 247, 583, 1349, 1577, 1652 |
| BstZ17I | GTATAC | 1 cut(s) | 1533 |
| BsuI | GTATCC | 1 cut(s) | 1455 |
| BsuRI | GGCC | 4 cut(s) | 155, 167, 1411, 2485 |
| BtgI | CCRYGG | 3 cut(s) | 162, 1721, 2951 |
| BtsCI | GGATG | 7 cut(s) | 361, 523, 1639, 1658, 1695, 2026, 2902 |
| BtsI | GCAGTG | 1 cut(s) | 181 |
| BtsIMutI | CAGTG | 9 cut(s) | 77, 181, 549, 622, 878, 944, 1508, 1520, 2578 |
| Cac8I | GCNNGC | 7 cut(s) | 721, 1215, 1555, 1922, 2586, 2661, 2674 |
| CaiI | CAGNNNCTG | 2 cut(s) | 864, 1225 |
| CciI | TCATGA | 2 cut(s) | 603, 1006 |
| CfoI | GCGC | 1 cut(s) | 2554 |
| Cfr10I | RCCGGY | 1 cut(s) | 1411 |
| Cfr13I | GGNCC | 1 cut(s) | 234 |
| Cfr9I | CCCGGG | 1 cut(s) | 779 |
| CseI | GACGC | 3 cut(s) | 774, 1074, 1986 |
| Csp6I | GTAC | 3 cut(s) | 1277, 1613, 2125 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 541, 576 |
| CviQI | GTAC | 3 cut(s) | 1277, 1613, 2125 |
| DdeI | CTNAG | 9 cut(s) | 28, 251, 1218, 1730, 2016, 2242, 2459, 2595, 2810 |
| DraI | TTTAAA | 1 cut(s) | 2775 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 107, 1084 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 107, 1084 |
| EaeI | YGGCCR | 4 cut(s) | 153, 165, 1409, 2483 |
| Eam1104I | CTCTTC | 3 cut(s) | 175, 1744, 2125 |
| EarI | CTCTTC | 3 cut(s) | 175, 1744, 2125 |
| EciI | GGCGGA | 2 cut(s) | 113, 1779 |
| Ecl136II | GAGCTC | 1 cut(s) | 2228 |
| Eco130I | CCWWGG | 5 cut(s) | 150, 162, 1080, 1721, 2951 |
| Eco24I | GRGCYC | 2 cut(s) | 1492, 2230 |
| Eco47I | GGWCC | 1 cut(s) | 234 |
| Eco53kI | GAGCTC | 1 cut(s) | 2228 |
| Eco57I | CTGAAG | 2 cut(s) | 1088, 1257 |
| Eco88I | CYCGRG | 3 cut(s) | 779, 1548, 2138 |
| EcoICRI | GAGCTC | 1 cut(s) | 2228 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 736 |
| EcoRI | GAATTC | 1 cut(s) | 359 |
| EcoRII | CCWGG | 5 cut(s) | 271, 407, 800, 1468, 1588 |
| EcoT14I | CCWWGG | 5 cut(s) | 150, 162, 1080, 1721, 2951 |
| EcoT38I | GRGCYC | 2 cut(s) | 1492, 2230 |
| ErhI | CCWWGG | 5 cut(s) | 150, 162, 1080, 1721, 2951 |
| Esp3I | CGTCTC | 2 cut(s) | 93, 2139 |
| FaqI | GGGAC | 5 cut(s) | 247, 254, 1570, 1737, 2337 |
| FauI | CCCGC | 1 cut(s) | 74 |
| FauNDI | CATATG | 3 cut(s) | 525, 1675, 2917 |
| FbaI | TGATCA | 3 cut(s) | 855, 2413, 2497 |
| FblI | GTMKAC | 4 cut(s) | 135, 1419, 1532, 1830 |
| Fnu4HI | GCNGC | 7 cut(s) | 96, 1545, 1696, 2013, 2526, 2535, 2601 |
| FokI | GGATG | 7 cut(s) | 368, 530, 1645, 1646, 1702, 2033, 2909 |
| FriOI | GRGCYC | 2 cut(s) | 1492, 2230 |
| Fsp4HI | GCNGC | 7 cut(s) | 96, 1545, 1696, 2013, 2526, 2535, 2601 |
| FspBI | CTAG | 4 cut(s) | 1905, 2615, 2634, 2840 |
| GlaI | GCGC | 1 cut(s) | 2553 |
| GluI | GCNGC | 7 cut(s) | 96, 1545, 1696, 2013, 2526, 2535, 2601 |
| GsaI | CCCAGC | 2 cut(s) | 1101, 1577 |
| GsuI | CTGGAG | 2 cut(s) | 902, 1476 |
| HaeIII | GGCC | 4 cut(s) | 155, 167, 1411, 2485 |
| HapII | CCGG | 4 cut(s) | 92, 780, 1412, 1875 |
| HgaI | GACGC | 3 cut(s) | 774, 1074, 1986 |
| HhaI | GCGC | 1 cut(s) | 2554 |
| Hin1I | GRCGYC | 3 cut(s) | 86, 785, 1085 |
| Hin6I | GCGC | 1 cut(s) | 2552 |
| HinP1I | GCGC | 1 cut(s) | 2552 |
| HincII | GTYRAC | 3 cut(s) | 136, 760, 1831 |
| HindII | GTYRAC | 3 cut(s) | 136, 760, 1831 |
| HindIII | AAGCTT | 3 cut(s) | 963, 1322, 2475 |
| HpaII | CCGG | 4 cut(s) | 92, 780, 1412, 1875 |
| HphI | GGTGA | 3 cut(s) | 1139, 1580, 1876 |
| Hpy166II | GTNNAC | 8 cut(s) | 136, 760, 899, 998, 1256, 1420, 1533, 1831 |
| Hpy8I | GTNNAC | 8 cut(s) | 136, 760, 899, 998, 1256, 1420, 1533, 1831 |
| Hpy99I | CGWCG | 2 cut(s) | 137, 140 |
| HpyAV | CCTTC | 7 cut(s) | 674, 1339, 1643, 1862, 2464, 2701, 2922 |
| HpyCH4III | ACNGT | 6 cut(s) | 133, 636, 754, 1779, 1835, 2573 |
| HpyCH4IV | ACGT | 5 cut(s) | 86, 762, 895, 901, 2680 |
| HpyF3I | CTNAG | 9 cut(s) | 28, 251, 1218, 1730, 2016, 2242, 2459, 2595, 2810 |
| HpySE526I | ACGT | 5 cut(s) | 86, 762, 895, 901, 2680 |
| Hsp92I | GRCGYC | 3 cut(s) | 86, 785, 1085 |
| HspAI | GCGC | 1 cut(s) | 2552 |
| Kpn2I | TCCGGA | 1 cut(s) | 1874 |
| Ksp22I | TGATCA | 3 cut(s) | 855, 2413, 2497 |
| LmnI | GCTCC | 4 cut(s) | 21, 694, 1495, 2904 |
| Lsp1109I | GCAGC | 5 cut(s) | 1531, 1707, 2521, 2537, 2587 |
| MaeI | CTAG | 4 cut(s) | 1905, 2615, 2634, 2840 |
| MaeII | ACGT | 5 cut(s) | 86, 762, 895, 901, 2680 |
| MaeIII | GTNAC | 5 cut(s) | 745, 891, 1365, 1835, 2280 |
| MbiI | CCGCTC | 1 cut(s) | 697 |
| MflI | RGATCY | 5 cut(s) | 247, 583, 1349, 1577, 1652 |
| MhlI | GDGCHC | 7 cut(s) | 1000, 1240, 1290, 1342, 1492, 1784, 2230 |
| MlsI | TGGCCA | 1 cut(s) | 2485 |
| MluI | ACGCGT | 1 cut(s) | 1978 |
| MluNI | TGGCCA | 1 cut(s) | 2485 |
| MlyI | GAGTC | 6 cut(s) | 134, 1172, 1316, 1511, 2018, 2791 |
| MmeI | TCCRAC | 5 cut(s) | 62, 407, 1845, 2130, 2882 |
| Mox20I | TGGCCA | 1 cut(s) | 2485 |
| MroI | TCCGGA | 1 cut(s) | 1874 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1738 |
| MscI | TGGCCA | 1 cut(s) | 2485 |
| MseI | TTAA | 7 cut(s) | 387, 912, 960, 1425, 1665, 2774, 2877 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1035 |
| Msp20I | TGGCCA | 1 cut(s) | 2485 |
| MspA1I | CMGCKG | 2 cut(s) | 1544, 1698 |
| MspI | CCGG | 4 cut(s) | 92, 780, 1412, 1875 |
| MspR9I | CCNGG | 7 cut(s) | 273, 409, 780, 781, 802, 1470, 1590 |
| Mva1269I | GAATGC | 2 cut(s) | 121, 2038 |
| MvaI | CCWGG | 5 cut(s) | 273, 409, 802, 1470, 1590 |
| MvnI | CGCG | 1 cut(s) | 1980 |
| NciI | CCSGG | 2 cut(s) | 780, 781 |
| NcoI | CCATGG | 3 cut(s) | 162, 1721, 2951 |
| NdeI | CATATG | 3 cut(s) | 525, 1675, 2917 |
| NlaIV | GGNNCC | 8 cut(s) | 199, 235, 406, 585, 598, 1239, 1491, 2049 |
| NmeAIII | GCCGAG | 1 cut(s) | 2913 |
| NmuCI | GTSAC | 5 cut(s) | 745, 891, 1365, 1835, 2280 |
| NspI | RCATGY | 3 cut(s) | 1159, 1217, 1557 |
| NspV | TTCGAA | 1 cut(s) | 2705 |
| PaeI | GCATGC | 2 cut(s) | 1217, 1557 |
| PagI | TCATGA | 2 cut(s) | 603, 1006 |
| PciI | ACATGT | 1 cut(s) | 1155 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 1854, 1863, 2129 |
| PctI | GAATGC | 2 cut(s) | 121, 2038 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1738 |
| PflFI | GACNNNGTC | 1 cut(s) | 889 |
| PfoI | TCCNGGA | 1 cut(s) | 407 |
| PkrI | GCNGC | 7 cut(s) | 97, 1546, 1697, 2014, 2527, 2536, 2602 |
| PleI | GAGTC | 6 cut(s) | 134, 1171, 1315, 1511, 2018, 2791 |
| PpsI | GAGTC | 6 cut(s) | 134, 1171, 1315, 1511, 2018, 2791 |
| Ppu21I | YACGTR | 1 cut(s) | 902 |
| PscI | ACATGT | 1 cut(s) | 1155 |
| PshBI | ATTAAT | 2 cut(s) | 1425, 1665 |
| PsiI | TTATAA | 2 cut(s) | 492, 1445 |
| Psp124BI | GAGCTC | 1 cut(s) | 2230 |
| Psp6I | CCWGG | 5 cut(s) | 271, 407, 800, 1468, 1588 |
| PspFI | CCCAGC | 2 cut(s) | 1097, 1573 |
| PspGI | CCWGG | 5 cut(s) | 271, 407, 800, 1468, 1588 |
| PspN4I | GGNNCC | 8 cut(s) | 199, 235, 406, 585, 598, 1239, 1491, 2049 |
| PspPI | GGNCC | 1 cut(s) | 234 |
| PstI | CTGCAG | 1 cut(s) | 318 |
| PstNI | CAGNNNCTG | 2 cut(s) | 864, 1225 |
| PsuI | RGATCY | 5 cut(s) | 247, 583, 1349, 1577, 1652 |
| PsyI | GACNNNGTC | 1 cut(s) | 889 |
| PvuII | CAGCTG | 2 cut(s) | 1544, 1698 |
| RsaI | GTAC | 3 cut(s) | 1278, 1614, 2126 |
| RsaNI | GTAC | 3 cut(s) | 1277, 1613, 2125 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1035 |
| SacI | GAGCTC | 1 cut(s) | 2230 |
| SalI | GTCGAC | 2 cut(s) | 134, 1829 |
| SaqAI | TTAA | 7 cut(s) | 387, 912, 960, 1425, 1665, 2774, 2877 |
| SatI | GCNGC | 7 cut(s) | 96, 1545, 1696, 2013, 2526, 2535, 2601 |
| Sau96I | GGNCC | 1 cut(s) | 234 |
| SchI | GAGTC | 6 cut(s) | 134, 1172, 1316, 1511, 2018, 2791 |
| ScrFI | CCNGG | 7 cut(s) | 273, 409, 780, 781, 802, 1470, 1590 |
| SduI | GDGCHC | 7 cut(s) | 1000, 1240, 1290, 1342, 1492, 1784, 2230 |
| SfcI | CTRYAG | 3 cut(s) | 314, 1122, 2853 |
| SfuI | TTCGAA | 1 cut(s) | 2705 |
| SgrDI | CGTCGACG | 1 cut(s) | 134 |
| SinI | GGWCC | 1 cut(s) | 234 |
| SmaI | CCCGGG | 1 cut(s) | 781 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1035 |
| SmlI | CTYRAG | 1 cut(s) | 551 |
| SmoI | CTYRAG | 1 cut(s) | 551 |
| SpeI | ACTAGT | 1 cut(s) | 2633 |
| SphI | GCATGC | 2 cut(s) | 1217, 1557 |
| SspMI | CTAG | 4 cut(s) | 1905, 2615, 2634, 2840 |
| SstI | GAGCTC | 1 cut(s) | 2230 |
| StyD4I | CCNGG | 7 cut(s) | 271, 407, 778, 779, 800, 1468, 1588 |
| StyI | CCWWGG | 5 cut(s) | 150, 162, 1080, 1721, 2951 |
| TaaI | ACNGT | 6 cut(s) | 133, 636, 754, 1779, 1835, 2573 |
| TaiI | ACGT | 5 cut(s) | 89, 765, 898, 904, 2683 |
| TaqI | TCGA | 7 cut(s) | 135, 1132, 1195, 1830, 1866, 2694, 2705 |
| TatI | WGTACW | 1 cut(s) | 1276 |
| TauI | GCSGC | 2 cut(s) | 98, 2015 |
| Tru1I | TTAA | 7 cut(s) | 387, 912, 960, 1425, 1665, 2774, 2877 |
| Tru9I | TTAA | 7 cut(s) | 387, 912, 960, 1425, 1665, 2774, 2877 |
| TscAI | CASTG | 9 cut(s) | 77, 181, 549, 622, 885, 944, 1515, 1527, 2578 |
| TseFI | GTSAC | 5 cut(s) | 745, 891, 1365, 1835, 2280 |
| TseI | GCWGC | 5 cut(s) | 1544, 1695, 2525, 2534, 2600 |
| Tsp45I | GTSAC | 5 cut(s) | 745, 891, 1365, 1835, 2280 |
| TspMI | CCCGGG | 1 cut(s) | 779 |
| TspRI | CASTG | 9 cut(s) | 77, 181, 549, 622, 885, 944, 1515, 1527, 2578 |
| Tth111I | GACNNNGTC | 1 cut(s) | 889 |
| VneI | GTGCAC | 1 cut(s) | 996 |
| VpaK11BI | GGWCC | 1 cut(s) | 234 |
| VspI | ATTAAT | 2 cut(s) | 1425, 1665 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 736 |
| XapI | RAATTY | 6 cut(s) | 359, 1760, 2298, 2464, 2641, 2768 |
| XbaI | TCTAGA | 1 cut(s) | 2839 |
| XceI | RCATGY | 3 cut(s) | 1159, 1217, 1557 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 465, 885 |
| XmaI | CCCGGG | 1 cut(s) | 779 |
| XmiI | GTMKAC | 4 cut(s) | 135, 1419, 1532, 1830 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1738 |
| XspI | CTAG | 4 cut(s) | 1905, 2615, 2634, 2840 |
| ZraI | GACGTC | 1 cut(s) | 87 |