FvH4_7g18180
NAC Family

inactive purple acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0007460
Physical Location & Seq
Reverse (-)
15247013 .. 15250315
3303 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g18180.t2

Sequence Viewer

Length: 1146 bp
ATGGGTCATTTTCTGACGACGGTGGTGGTGGTGGTGGCGCTGCTTCCGATCTGGGTTTTGGCTGTGGAGGCCAGTAAGCATCGGGAAGAGAAGACGACGAAAAGTCTGAGGTTTGGGGGAGATGGGCAGTTTAAAATACTGCAAGTGGCGGACATGCACTACGCCGATGGGAAAATGACGCCGTGTGAGGATGTGCTGCCGTCCCAGGTGGCGGGTTGCTCTGACTTGAATACCACGGCGTTTGTGAAAAGGATGATTCAGGCTGAGAAGCCTGATTTCATTGTTTTCACCGGAGATAACATATATGGGTTTGATGCTACGGATGCTGCTAAATCAATGGATGCGGCGTTTGCTCCAGCAATTGCATCCAACATTCCGTGGGCAGCTGTTTTGGGGAACCATGATCAGGAATCTGATCTCTCGAGGGAAGGGGTAATGAAGCACATAGTTGGGTATAAAAGCACCCTGGCTCAAGTCAATCCTTCCGATCAAGATGTTATTGATGGTTTTGGGAACTATAATCTGGAGGTAGGTGGGGTTCAGGGTACTGGTTTCGAAAACAAATCGGTTCTCAACCTCTACTTCCTTGACAGTGGAGATTACTCGACAGTTCCCTCTATCCCTGGTTATGGTTGGATCAAACCCTCCCAACAATTCTGGTTCCAACAAACTTCGGCAAATCTAAAGAAAGCATACATGAAAAAGCCACAGGCGCAGAAAACTTCTGCTCCAGGGCTGGCATACTTTCACATACCGTTACCAGAATTTGCTAGTTTTGACTCATCAAACTCCACCGGAGTGAGGCAAGAAGGCATTAGCTCTGCCTCTGTGAACTCTGGCTTCTTCACAACCCTGGTTGAAGCAGGCGATGTGAAGGCTGTTTTCACAGGCCATGATCATGTCAATGACTTCTGTGGGAAGCTAACTGGCATAAACCTTTGTTATGCTGGGGGATTCGGATACCATGCATATGGAAAGGCGGGATGGGATAGGAGAGCAAGGGTGGTAGCAGCAACCTTAGAGAAAACAAGTACTGGAGGTTGGGGTGCAGTCAAGTCAATCAAAACATGGAAGCGCCTCGATGATCAGCACCTCAGTACTATCAACAGTGAGGTTCTCTGGACCAAGAGTTCTGCTGTGGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003993 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0044237
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos

Protein Analysis

382

Amino Acids

41.27

Weight (kDa)

6.2

Isoelectric Point (pI)

32.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 44 - 301 7e-16 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 149, 212, 344, 980
AclWI GGATC 1 cut(s) 644
AcsI RAATTY 1 cut(s) 764
AcyI GRCGYC 1 cut(s) 179
AfaI GTAC 3 cut(s) 547, 1033, 1099
AfiI CCNNNNNNNGG 4 cut(s) 211, 406, 629, 801
AgsI TTSAA 2 cut(s) 229, 860
AhdI GACNNNNNGTC 1 cut(s) 102
AjnI CCWGG 5 cut(s) 204, 465, 622, 730, 852
AleI CACNNNNGTG 1 cut(s) 797
AloI GAACNNNNNNTCC 2 cut(s) 1114, 1146
AluBI AGCT 3 cut(s) 386, 819, 922
AluI AGCT 3 cut(s) 386, 819, 922
AlwI GGATC 1 cut(s) 644
Ama87I CYCGRG 1 cut(s) 421
AoxI GGCC 2 cut(s) 69, 889
ApeKI GCWGC 5 cut(s) 40, 196, 326, 383, 1010
ApoI RAATTY 1 cut(s) 764
AspLEI GCGC 3 cut(s) 40, 715, 1077
AspS9I GGNCC 1 cut(s) 1122
AsuHPI GGTGA 1 cut(s) 280
AsuII TTCGAA 1 cut(s) 555
AvaI CYCGRG 1 cut(s) 421
AvaII GGWCC 1 cut(s) 1122
BbsI GAAGAC 1 cut(s) 98
BbvI GCAGC 5 cut(s) 27, 183, 313, 395, 1022
BccI CCATC 4 cut(s) 116, 161, 497, 978
BceAI ACGGC 3 cut(s) 166, 184, 252
BciT130I CCWGG 5 cut(s) 206, 467, 624, 732, 854
BciVI GTATCC 1 cut(s) 953
BclI TGATCA 3 cut(s) 403, 895, 1084
BfaI CTAG 1 cut(s) 771
BfoI RGCGCY 2 cut(s) 41, 1078
BfuI GTATCC 1 cut(s) 953
BisI GCNGC 6 cut(s) 41, 197, 327, 345, 384, 1011
BlsI GCNGC 6 cut(s) 42, 198, 328, 346, 385, 1012
BmcAI AGTACT 2 cut(s) 1033, 1099
Bme1390I CCNGG 5 cut(s) 206, 467, 624, 732, 854
Bme18I GGWCC 1 cut(s) 1122
BmeRI GACNNNNNGTC 1 cut(s) 102
BmeT110I CYCGRG 1 cut(s) 421
BmgT120I GGNCC 1 cut(s) 1122
BmiI GGNNCC 2 cut(s) 398, 662
BmrFI CCNGG 5 cut(s) 206, 467, 624, 732, 854
BmsI GCATC 5 cut(s) 88, 304, 313, 331, 374
BpiI GAAGAC 1 cut(s) 98
BpmI CTGGAG 4 cut(s) 339, 545, 714, 1056
Bpu14I TTCGAA 1 cut(s) 555
BpuEI CTTGAG 1 cut(s) 456
BsaHI GRCGYC 1 cut(s) 179
BsaJI CCNNGG 7 cut(s) 204, 234, 377, 465, 622, 731, 852
BsaWI WCCGGW 2 cut(s) 290, 794
BsaXI ACNNNNNCTCC 2 cut(s) 712, 742
Bsc4I CCNNNNNNNGG 4 cut(s) 211, 406, 629, 801
Bse1I ACTGG 4 cut(s) 72, 553, 931, 1039
BseBI CCWGG 5 cut(s) 206, 467, 624, 732, 854
BseDI CCNNGG 7 cut(s) 204, 234, 377, 465, 622, 731, 852
BseGI GGATG 6 cut(s) 196, 258, 328, 346, 365, 989
BseLI CCNNNNNNNGG 4 cut(s) 211, 406, 629, 801
BseMII CTCAG 3 cut(s) 98, 255, 1108
BseNI ACTGG 4 cut(s) 72, 553, 931, 1039
BseXI GCAGC 5 cut(s) 27, 183, 313, 395, 1022
BseYI CCCAGC 1 cut(s) 947
BsgI GTGCAG 1 cut(s) 1068
BshFI GGCC 2 cut(s) 71, 891
BsiHKCI CYCGRG 1 cut(s) 421
BsiSI CCGG 2 cut(s) 291, 795
BslFI GGGAC 1 cut(s) 187
BslI CCNNNNNNNGG 4 cut(s) 211, 406, 629, 801
BsmFI GGGAC 1 cut(s) 187
BsnI GGCC 2 cut(s) 71, 891
BsoBI CYCGRG 1 cut(s) 421
Bsp119I TTCGAA 1 cut(s) 555
Bsp143I GATC 7 cut(s) 48, 403, 415, 487, 636, 895, 1084
BspACI CCGC 4 cut(s) 149, 212, 344, 980
BspANI GGCC 2 cut(s) 71, 891
BspCNI CTCAG 3 cut(s) 99, 256, 1107
BspLI GGNNCC 2 cut(s) 398, 662
BspPI GGATC 1 cut(s) 644
BspT104I TTCGAA 1 cut(s) 555
BsrI ACTGG 4 cut(s) 72, 553, 931, 1039
BssECI CCNNGG 7 cut(s) 204, 234, 377, 465, 622, 731, 852
BssMI GATC 7 cut(s) 48, 403, 415, 487, 636, 895, 1084
BssNI GRCGYC 1 cut(s) 179
Bst2UI CCWGG 5 cut(s) 206, 467, 624, 732, 854
Bst4CI ACNGT 5 cut(s) 22, 593, 610, 756, 1109
Bst6I CTCTTC 1 cut(s) 81
BstACI GRCGYC 1 cut(s) 179
BstBI TTCGAA 1 cut(s) 555
BstC8I GCNNGC 2 cut(s) 738, 865
BstDEI CTNAG 4 cut(s) 107, 264, 1018, 1094
BstDSI CCRYGG 2 cut(s) 234, 377
BstF5I GGATG 6 cut(s) 196, 258, 328, 346, 365, 989
BstH2I RGCGCY 2 cut(s) 41, 1078
BstHHI GCGC 3 cut(s) 40, 715, 1077
BstKTI GATC 7 cut(s) 51, 406, 418, 490, 639, 898, 1087
BstMBI GATC 7 cut(s) 48, 403, 415, 487, 636, 895, 1084
BstMWI GCNNNNNNNGC 4 cut(s) 68, 323, 350, 712
BstNI CCWGG 5 cut(s) 206, 467, 624, 732, 854
BstNSI RCATGY 1 cut(s) 157
BstSCI CCNGG 5 cut(s) 204, 465, 622, 730, 852
BstV1I GCAGC 5 cut(s) 27, 183, 313, 395, 1022
BstV2I GAAGAC 1 cut(s) 98
BstXI CCANNNNNNTGG 1 cut(s) 971
BsuI GTATCC 1 cut(s) 953
BsuRI GGCC 2 cut(s) 71, 891
BtgI CCRYGG 2 cut(s) 234, 377
BtgZI GCGATG 1 cut(s) 882
BtsCI GGATG 6 cut(s) 196, 258, 328, 346, 365, 989
BtsIMutI CAGTG 2 cut(s) 598, 1114
Cac8I GCNNGC 2 cut(s) 738, 865
CfoI GCGC 3 cut(s) 40, 715, 1077
Cfr13I GGNCC 1 cut(s) 1122
CseI GACGC 1 cut(s) 187
Csp6I GTAC 3 cut(s) 546, 1032, 1098
CspCI CAANNNNNGTGG 2 cut(s) 223, 258
CviAII CATG 7 cut(s) 154, 401, 697, 893, 899, 965, 1068
CviQI GTAC 3 cut(s) 546, 1032, 1098
DdeI CTNAG 4 cut(s) 107, 264, 1018, 1094
DpnI GATC 7 cut(s) 50, 405, 417, 489, 638, 897, 1086
DpnII GATC 7 cut(s) 48, 403, 415, 487, 636, 895, 1084
DraI TTTAAA 1 cut(s) 133
DriI GACNNNNNGTC 1 cut(s) 102
Eam1104I CTCTTC 1 cut(s) 81
Eam1105I GACNNNNNGTC 1 cut(s) 102
EarI CTCTTC 1 cut(s) 81
EciI GGCGGA 1 cut(s) 164
Eco47I GGWCC 1 cut(s) 1122
Eco88I CYCGRG 1 cut(s) 421
EcoRII CCWGG 5 cut(s) 204, 465, 622, 730, 852
EcoT22I ATGCAT 1 cut(s) 970
FaeI CATG 7 cut(s) 157, 404, 700, 896, 902, 968, 1071
FaqI GGGAC 1 cut(s) 187
FatI CATG 7 cut(s) 153, 400, 696, 892, 898, 964, 1067
FauI CCCGC 2 cut(s) 205, 973
FauNDI CATATG 1 cut(s) 970
FbaI TGATCA 3 cut(s) 403, 895, 1084
Fnu4HI GCNGC 6 cut(s) 41, 197, 327, 345, 384, 1011
FokI GGATG 6 cut(s) 203, 265, 335, 352, 353, 996
Fsp4HI GCNGC 6 cut(s) 41, 197, 327, 345, 384, 1011
FspBI CTAG 1 cut(s) 771
GlaI GCGC 3 cut(s) 39, 714, 1076
GluI GCNGC 6 cut(s) 41, 197, 327, 345, 384, 1011
GsaI CCCAGC 1 cut(s) 951
GsuI CTGGAG 4 cut(s) 339, 545, 714, 1056
HaeII RGCGCY 2 cut(s) 41, 1078
HaeIII GGCC 2 cut(s) 71, 891
HapII CCGG 2 cut(s) 291, 795
HgaI GACGC 1 cut(s) 187
HhaI GCGC 3 cut(s) 40, 715, 1077
Hin1I GRCGYC 1 cut(s) 179
Hin1II CATG 7 cut(s) 157, 404, 700, 896, 902, 968, 1071
Hin6I GCGC 3 cut(s) 38, 713, 1075
HinP1I GCGC 3 cut(s) 38, 713, 1075
HinfI GANTC 4 cut(s) 256, 410, 779, 954
HpaII CCGG 2 cut(s) 291, 795
HphI GGTGA 1 cut(s) 280
Hpy166II GTNNAC 1 cut(s) 832
Hpy188I TCNGA 7 cut(s) 15, 48, 108, 223, 415, 487, 959
Hpy188III TCNNGA 6 cut(s) 83, 407, 421, 491, 524, 1120
Hpy8I GTNNAC 1 cut(s) 832
Hpy99I CGWCG 2 cut(s) 22, 100
HpyAV CCTTC 4 cut(s) 422, 492, 803, 868
HpyCH4III ACNGT 5 cut(s) 22, 593, 610, 756, 1109
HpyCH4V TGCA 5 cut(s) 142, 157, 365, 968, 1049
HpyF10VI GCNNNNNNNGC 4 cut(s) 68, 323, 350, 712
HpyF3I CTNAG 4 cut(s) 107, 264, 1018, 1094
Hsp92I GRCGYC 1 cut(s) 179
Hsp92II CATG 7 cut(s) 157, 404, 700, 896, 902, 968, 1071
HspAI GCGC 3 cut(s) 38, 713, 1075
Ksp22I TGATCA 3 cut(s) 403, 895, 1084
Kzo9I GATC 7 cut(s) 48, 403, 415, 487, 636, 895, 1084
LmnI GCTCC 2 cut(s) 358, 733
Lsp1109I GCAGC 5 cut(s) 27, 183, 313, 395, 1022
LweI GCATC 5 cut(s) 88, 304, 313, 331, 374
MaeI CTAG 1 cut(s) 771
MaeIII GTNAC 1 cut(s) 756
MalI GATC 7 cut(s) 50, 405, 417, 489, 638, 897, 1086
MboI GATC 7 cut(s) 48, 403, 415, 487, 636, 895, 1084
MboII GAAGA 3 cut(s) 98, 103, 835
MfeI CAATTG 1 cut(s) 360
MluCI AATT 3 cut(s) 360, 653, 764
MlyI GAGTC 1 cut(s) 773
MmeI TCCRAC 3 cut(s) 393, 614, 688
Mph1103I ATGCAT 1 cut(s) 970
MseI TTAA 1 cut(s) 132
MslI CAYNNNNRTG 4 cut(s) 797, 897, 903, 969
MspA1I CMGCKG 1 cut(s) 386
MspI CCGG 2 cut(s) 291, 795
MspR9I CCNGG 5 cut(s) 206, 467, 624, 732, 854
MunI CAATTG 1 cut(s) 360
MvaI CCWGG 5 cut(s) 206, 467, 624, 732, 854
MwoI GCNNNNNNNGC 4 cut(s) 68, 323, 350, 712
NdeI CATATG 1 cut(s) 970
NdeII GATC 7 cut(s) 48, 403, 415, 487, 636, 895, 1084
NlaIII CATG 7 cut(s) 157, 404, 700, 896, 902, 968, 1071
NlaIV GGNNCC 2 cut(s) 398, 662
NsiI ATGCAT 1 cut(s) 970
NspI RCATGY 1 cut(s) 157
NspV TTCGAA 1 cut(s) 555
OliI CACNNNNGTG 1 cut(s) 797
PaeR7I CTCGAG 1 cut(s) 421
PfeI GAWTC 3 cut(s) 256, 410, 954
PkrI GCNGC 6 cut(s) 42, 198, 328, 346, 385, 1012
PleI GAGTC 1 cut(s) 773
PpsI GAGTC 1 cut(s) 773
Psp6I CCWGG 5 cut(s) 204, 465, 622, 730, 852
PspFI CCCAGC 1 cut(s) 947
PspGI CCWGG 5 cut(s) 204, 465, 622, 730, 852
PspN4I GGNNCC 2 cut(s) 398, 662
PspPI GGNCC 1 cut(s) 1122
PsrI GAACNNNNNNTAC 2 cut(s) 522, 554
PvuII CAGCTG 1 cut(s) 386
RsaI GTAC 3 cut(s) 547, 1033, 1099
RsaNI GTAC 3 cut(s) 546, 1032, 1098
RseI CAYNNNNRTG 4 cut(s) 797, 897, 903, 969
SaqAI TTAA 1 cut(s) 132
SatI GCNGC 6 cut(s) 41, 197, 327, 345, 384, 1011
Sau3AI GATC 7 cut(s) 48, 403, 415, 487, 636, 895, 1084
Sau96I GGNCC 1 cut(s) 1122
ScaI AGTACT 2 cut(s) 1033, 1099
SchI GAGTC 1 cut(s) 773
ScrFI CCNGG 5 cut(s) 206, 467, 624, 732, 854
SfaNI GCATC 5 cut(s) 88, 304, 313, 331, 374
Sfr274I CTCGAG 1 cut(s) 421
SfuI TTCGAA 1 cut(s) 555
SinI GGWCC 1 cut(s) 1122
SlaI CTCGAG 1 cut(s) 421
SmiMI CAYNNNNRTG 4 cut(s) 797, 897, 903, 969
SmlI CTYRAG 2 cut(s) 421, 471
SmoI CTYRAG 2 cut(s) 421, 471
Sse9I AATT 3 cut(s) 360, 653, 764
SsiI CCGC 4 cut(s) 149, 212, 344, 980
SspMI CTAG 1 cut(s) 771
StyD4I CCNGG 5 cut(s) 204, 465, 622, 730, 852
TaaI ACNGT 5 cut(s) 22, 593, 610, 756, 1109
TaqI TCGA 4 cut(s) 422, 555, 605, 1080
TasI AATT 3 cut(s) 360, 653, 764
TatI WGTACW 2 cut(s) 1031, 1097
TauI GCSGC 1 cut(s) 347
TfiI GAWTC 3 cut(s) 256, 410, 954
Tru1I TTAA 1 cut(s) 132
Tru9I TTAA 1 cut(s) 132
TscAI CASTG 2 cut(s) 598, 1114
TseI GCWGC 5 cut(s) 40, 196, 326, 383, 1010
TspDTI ATGAA 3 cut(s) 268, 452, 713
TspGWI ACGGA 2 cut(s) 335, 366
TspRI CASTG 2 cut(s) 598, 1114
VpaK11BI GGWCC 1 cut(s) 1122
XapI RAATTY 1 cut(s) 764
XceI RCATGY 1 cut(s) 157
XhoI CTCGAG 1 cut(s) 421
XspI CTAG 1 cut(s) 771
ZrmI AGTACT 2 cut(s) 1033, 1099
Zsp2I ATGCAT 1 cut(s) 970
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.