FvH4_7g23960

Sedoheptulose-1,7-bisphosphatase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
18572203 .. 18574710
2508 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g23960.t1

Sequence Viewer

Length: 1179 bp
ATGGAGGCCAGCATAGCCTGCTGTTCAGCTAGGGCATTCCTGCCCGGTGTTTCGACGCAGCATTCGACTGCACTGGCTGCTCCATCCACCATCTCTCCATCTTTCAGCTCCAAGAGCCTAAAAGCAACTTCCCTGTTTGGGGAGTCACTAAGACAAGTGCCAAGATCATCATTGAAGGTTTCAAAGACAAAGCAGTCTTCTTTGGTCACCAAATGTGAAATTGGTGATAGCTTGGAGGAGTTCCTTACAAAGGCAACCCCGGATAAAGGGCTGATCAGGTTGATGATGTGTATGGGGGAAGCAATTAGAACTATTTCCTTCAAGGTGAGAACTGCTTCATGTGGAGGAACAGCCTGTGTTAACTCTTTCGGGGATGAGCAGCTCGCGGTAGATATGCTCGCCGACAAACTTCTGTTTGAGGCCTTAACTTACTCACATGTCTGCAAATACGCTTGCTCTGAAGAGGTTCCAGAACTCCAAGACATGGGAGGTCCAGTTGAAGGTGGATTCAGTGTTGCTTTTGATCCACTGGACGGCTCCAGCATTGTTGACACCAACTTCACTGTGGGCACCATCTTTGGGGTTTGGCCAGGAGATAAATTAACTGGTGTAACAGGGGCAGACCAAGTTGCTGCAGCCATGGGAATTTATGGTCCTAGAACTACTTATGTCCTTGCCATTAAGGGCTTCCCCGGAACACATGAGTTCCTTCTTCTCGATGAAGGAAAGTGGCAACATGTCAAAGAGACAACAGAGATATCAGAAGGGAAAATGTTCTCTCCTGGAAATTTGAGAGCCACATTTGATAATCCAGACTATGACAAGTTGATCAACTACTATGTCAAAGAGAAATACACACTGAGATACACTGGAGGAATGGTACCAGATGTCAACCAGATAATTGTAAAGGAAAAGGGGGTTTTCACCAATGTTTTATCTCCAACTACCAAAGCCAAGCTCAGGCTGTTGTTTGAGGTAGCTCCATTGGGGTTATTGGTTGAGAATGCTGGCGGTTATAGTAGTGATGGTCATCAGTCTGTGCTAGACAAGGTCATCGGAAAGCTCGACGAAAGAACTCAAGTTGCTTATGGATCCAAGAATGAGATCATCCGGTTCGAAGAAACTCTATACGGCTCATCCAGGCTCAAAGGAGGTGTGGCTGTTGGAGCTGCCGCTTAA

Protein Analysis

393

Amino Acids

42.09

Weight (kDa)

5.86

Isoelectric Point (pI)

30.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBPase PF00316 69 - 249 1.9e-57 Fructose-1-6-bisphosphatase, N-terminal domain
FBPase_C PF18913 255 - 375 7.2e-37 Fructose-1-6-bisphosphatase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 193
Acc65I GGTACC 1 cut(s) 880
AccB1I GGYRCC 2 cut(s) 569, 880
AccB7I CCANNNNNTGG 1 cut(s) 484
AccII CGCG 1 cut(s) 386
AciI CCGC 3 cut(s) 386, 1011, 1173
AclWI GGATC 3 cut(s) 518, 1086, 1099
AcoI YGGCCR 1 cut(s) 587
AcsI RAATTY 2 cut(s) 645, 787
AcuI CTGAAG 1 cut(s) 480
AfaI GTAC 1 cut(s) 882
AfiI CCNNNNNNNGG 9 cut(s) 138, 139, 250, 266, 484, 500, 533, 579, 960
AflIII ACRYGT 2 cut(s) 436, 736
AgsI TTSAA 4 cut(s) 175, 183, 322, 500
AjnI CCWGG 3 cut(s) 589, 781, 1139
AluBI AGCT 8 cut(s) 29, 108, 231, 382, 958, 980, 1063, 1169
AluI AGCT 8 cut(s) 29, 108, 231, 382, 958, 980, 1063, 1169
Alw26I GTCTC 1 cut(s) 740
AlwI GGATC 3 cut(s) 518, 1086, 1099
AoxI GGCC 3 cut(s) 6, 420, 587
ApeKI GCWGC 6 cut(s) 58, 77, 379, 632, 635, 1169
ApoI RAATTY 2 cut(s) 645, 787
ArsI GACNNNNNNTTYG 2 cut(s) 46, 78
Asp700I GAANNNNTTC 4 cut(s) 313, 334, 465, 773
Asp718I GGTACC 1 cut(s) 880
AspS9I GGNCC 2 cut(s) 491, 653
AsuC2I CCSGG 3 cut(s) 45, 260, 693
AsuHPI GGTGA 4 cut(s) 199, 236, 337, 916
AsuII TTCGAA 1 cut(s) 1116
AvaII GGWCC 2 cut(s) 491, 653
BaeGI GKGCMC 1 cut(s) 572
BalI TGGCCA 1 cut(s) 589
BamHI GGATCC 1 cut(s) 1091
BanI GGYRCC 2 cut(s) 569, 880
BbsI GAAGAC 1 cut(s) 189
BbvI GCAGC 6 cut(s) 64, 70, 391, 619, 647, 1156
BccI CCATC 5 cut(s) 91, 98, 106, 581, 1019
BceAI ACGGC 2 cut(s) 550, 1147
BciT130I CCWGG 3 cut(s) 591, 783, 1141
BclI TGATCA 2 cut(s) 273, 828
BcnI CCSGG 3 cut(s) 45, 260, 693
BcoDI GTCTC 1 cut(s) 740
BfaI CTAG 3 cut(s) 30, 657, 1043
BfmI CTRYAG 1 cut(s) 633
BisI GCNGC 7 cut(s) 59, 78, 380, 633, 636, 1170, 1173
BlsI GCNGC 7 cut(s) 60, 79, 381, 634, 637, 1171, 1174
Bme1390I CCNGG 6 cut(s) 45, 260, 591, 693, 783, 1141
Bme18I GGWCC 2 cut(s) 491, 653
BmgT120I GGNCC 2 cut(s) 491, 653
BmiI GGNNCC 5 cut(s) 468, 538, 571, 882, 1093
BmrFI CCNGG 6 cut(s) 45, 260, 591, 693, 783, 1141
BpiI GAAGAC 1 cut(s) 189
BpmI CTGGAG 2 cut(s) 523, 891
Bpu10I CCTNAGC 1 cut(s) 959
Bpu14I TTCGAA 1 cut(s) 1116
BpuEI CTTGAG 1 cut(s) 1062
BpuMI CCSGG 3 cut(s) 45, 260, 693
BsaBI GATNNNNATC 1 cut(s) 1029
BsaJI CCNNGG 3 cut(s) 258, 639, 691
BsaWI WCCGGW 1 cut(s) 1110
BsaXI ACNNNNNCTCC 6 cut(s) 79, 109, 480, 510, 864, 894
Bsc4I CCNNNNNNNGG 9 cut(s) 138, 139, 250, 266, 484, 500, 533, 579, 960
Bse1I ACTGG 5 cut(s) 78, 494, 534, 610, 874
Bse8I GATNNNNATC 1 cut(s) 1029
BseBI CCWGG 3 cut(s) 591, 783, 1141
BseDI CCNNGG 3 cut(s) 258, 639, 691
BseGI GGATG 4 cut(s) 83, 379, 1107, 1136
BseJI GATNNNNATC 1 cut(s) 1029
BseLI CCNNNNNNNGG 9 cut(s) 138, 139, 250, 266, 484, 500, 533, 579, 960
BseMII CTCAG 2 cut(s) 851, 973
BseNI ACTGG 5 cut(s) 78, 494, 534, 610, 874
BseRI GAGGAG 1 cut(s) 251
BseSI GKGCMC 1 cut(s) 572
BseXI GCAGC 6 cut(s) 64, 70, 391, 619, 647, 1156
BsgI GTGCAG 1 cut(s) 54
Bsh1236I CGCG 1 cut(s) 386
BshFI GGCC 3 cut(s) 8, 422, 589
BshNI GGYRCC 2 cut(s) 569, 880
BsiSI CCGG 4 cut(s) 45, 260, 693, 1111
BslI CCNNNNNNNGG 9 cut(s) 138, 139, 250, 266, 484, 500, 533, 579, 960
BsmAI GTCTC 1 cut(s) 740
BsmI GAATGC 3 cut(s) 35, 61, 1009
BsnI GGCC 3 cut(s) 8, 422, 589
Bsp119I TTCGAA 1 cut(s) 1116
Bsp1286I GDGCHC 1 cut(s) 572
Bsp143I GATC 6 cut(s) 164, 273, 523, 828, 1091, 1104
Bsp19I CCATGG 1 cut(s) 639
BspACI CCGC 3 cut(s) 386, 1011, 1173
BspANI GGCC 3 cut(s) 8, 422, 589
BspCNI CTCAG 2 cut(s) 852, 972
BspFNI CGCG 1 cut(s) 386
BspLI GGNNCC 5 cut(s) 468, 538, 571, 882, 1093
BspMAI CTGCAG 1 cut(s) 637
BspPI GGATC 3 cut(s) 518, 1086, 1099
BspT104I TTCGAA 1 cut(s) 1116
BspT107I GGYRCC 2 cut(s) 569, 880
BsrI ACTGG 5 cut(s) 78, 494, 534, 610, 874
BssECI CCNNGG 3 cut(s) 258, 639, 691
BssMI GATC 6 cut(s) 164, 273, 523, 828, 1091, 1104
BssT1I CCWWGG 1 cut(s) 639
Bst2UI CCWGG 3 cut(s) 591, 783, 1141
Bst4CI ACNGT 1 cut(s) 565
Bst6I CTCTTC 1 cut(s) 456
BstAPI GCANNNNNTGC 2 cut(s) 18, 77
BstBI TTCGAA 1 cut(s) 1116
BstC8I GCNNGC 6 cut(s) 10, 19, 384, 399, 454, 1009
BstDEI CTNAG 3 cut(s) 149, 860, 959
BstDSI CCRYGG 1 cut(s) 639
BstEII GGTNACC 1 cut(s) 205
BstENI CCTNNNNNAGG 1 cut(s) 248
BstF5I GGATG 4 cut(s) 83, 379, 1107, 1136
BstFNI CGCG 1 cut(s) 386
BstKTI GATC 6 cut(s) 167, 276, 526, 831, 1094, 1107
BstMAI GTCTC 1 cut(s) 740
BstMBI GATC 6 cut(s) 164, 273, 523, 828, 1091, 1104
BstMWI GCNNNNNNNGC 5 cut(s) 14, 18, 77, 114, 1166
BstNI CCWGG 3 cut(s) 591, 783, 1141
BstNSI RCATGY 2 cut(s) 440, 740
BstPI GGTNACC 1 cut(s) 205
BstSCI CCNGG 6 cut(s) 43, 258, 589, 691, 781, 1139
BstSFI CTRYAG 1 cut(s) 633
BstSLI GKGCMC 1 cut(s) 572
BstUI CGCG 1 cut(s) 386
BstV1I GCAGC 6 cut(s) 64, 70, 391, 619, 647, 1156
BstV2I GAAGAC 1 cut(s) 189
BstX2I RGATCY 1 cut(s) 1091
BstYI RGATCY 1 cut(s) 1091
BsuRI GGCC 3 cut(s) 8, 422, 589
BtgI CCRYGG 1 cut(s) 639
BtsCI GGATG 4 cut(s) 83, 379, 1107, 1136
BtsIMutI CAGTG 6 cut(s) 71, 517, 527, 561, 857, 867
Cac8I GCNNGC 6 cut(s) 10, 19, 384, 399, 454, 1009
Cfr13I GGNCC 2 cut(s) 491, 653
CseI GACGC 1 cut(s) 64
Csp6I GTAC 1 cut(s) 881
CviAII CATG 6 cut(s) 339, 437, 484, 640, 701, 737
CviQI GTAC 1 cut(s) 881
DdeI CTNAG 3 cut(s) 149, 860, 959
DpnI GATC 6 cut(s) 166, 275, 525, 830, 1093, 1106
DpnII GATC 6 cut(s) 164, 273, 523, 828, 1091, 1104
DrdI GACNNNNNNGTC 1 cut(s) 193
DseDI GACNNNNNNGTC 1 cut(s) 193
EaeI YGGCCR 1 cut(s) 587
Eam1104I CTCTTC 1 cut(s) 456
EarI CTCTTC 1 cut(s) 456
Eco130I CCWWGG 1 cut(s) 639
Eco147I AGGCCT 1 cut(s) 422
Eco32I GATATC 1 cut(s) 759
Eco47I GGWCC 2 cut(s) 491, 653
Eco57I CTGAAG 1 cut(s) 480
Eco91I GGTNACC 1 cut(s) 205
EcoNI CCTNNNNNAGG 1 cut(s) 248
EcoO65I GGTNACC 1 cut(s) 205
EcoRII CCWGG 3 cut(s) 589, 781, 1139
EcoRV GATATC 1 cut(s) 759
EcoT14I CCWWGG 1 cut(s) 639
ErhI CCWWGG 1 cut(s) 639
FaeI CATG 6 cut(s) 342, 440, 487, 643, 704, 740
FatI CATG 6 cut(s) 338, 436, 483, 639, 700, 736
FbaI TGATCA 2 cut(s) 273, 828
Fnu4HI GCNGC 7 cut(s) 59, 78, 380, 633, 636, 1170, 1173
FokI GGATG 4 cut(s) 70, 386, 1094, 1123
Fsp4HI GCNGC 7 cut(s) 59, 78, 380, 633, 636, 1170, 1173
FspBI CTAG 3 cut(s) 30, 657, 1043
GluI GCNGC 7 cut(s) 59, 78, 380, 633, 636, 1170, 1173
GsuI CTGGAG 2 cut(s) 523, 891
HaeIII GGCC 3 cut(s) 8, 422, 589
HapII CCGG 4 cut(s) 45, 260, 693, 1111
HgaI GACGC 1 cut(s) 64
Hin1II CATG 6 cut(s) 342, 440, 487, 643, 704, 740
HincII GTYRAC 3 cut(s) 361, 550, 892
HindII GTYRAC 3 cut(s) 361, 550, 892
HinfI GANTC 2 cut(s) 143, 507
HpaI GTTAAC 1 cut(s) 361
HpaII CCGG 4 cut(s) 45, 260, 693, 1111
HphI GGTGA 4 cut(s) 199, 236, 337, 916
Hpy166II GTNNAC 3 cut(s) 361, 550, 892
Hpy188I TCNGA 3 cut(s) 460, 763, 1058
Hpy188III TCNNGA 3 cut(s) 470, 716, 812
Hpy8I GTNNAC 3 cut(s) 361, 550, 892
Hpy99I CGWCG 2 cut(s) 58, 1070
HpyAV CCTTC 6 cut(s) 169, 328, 494, 716, 719, 758
HpyCH4III ACNGT 1 cut(s) 565
HpyCH4V TGCA 3 cut(s) 71, 444, 635
HpyF10VI GCNNNNNNNGC 5 cut(s) 14, 18, 77, 114, 1166
HpyF3I CTNAG 3 cut(s) 149, 860, 959
Hsp92II CATG 6 cut(s) 342, 440, 487, 643, 704, 740
KpnI GGTACC 1 cut(s) 884
Ksp22I TGATCA 2 cut(s) 273, 828
KspAI GTTAAC 1 cut(s) 361
Kzo9I GATC 6 cut(s) 164, 273, 523, 828, 1091, 1104
LmnI GCTCC 5 cut(s) 85, 113, 542, 985, 1166
Lsp1109I GCAGC 6 cut(s) 64, 70, 391, 619, 647, 1156
MaeI CTAG 3 cut(s) 30, 657, 1043
MaeIII GTNAC 3 cut(s) 144, 205, 610
MalI GATC 6 cut(s) 166, 275, 525, 830, 1093, 1106
MboI GATC 6 cut(s) 164, 273, 523, 828, 1091, 1104
MboII GAAGA 4 cut(s) 189, 473, 704, 1130
MflI RGATCY 1 cut(s) 1091
MhlI GDGCHC 1 cut(s) 572
MlsI TGGCCA 1 cut(s) 589
MluCI AATT 6 cut(s) 219, 303, 599, 645, 787, 900
MluNI TGGCCA 1 cut(s) 589
MlyI GAGTC 1 cut(s) 152
MmeI TCCRAC 2 cut(s) 965, 1144
MnlI CCTC 8 cut(s) 229, 338, 412, 457, 482, 866, 967, 1145
Mox20I TGGCCA 1 cut(s) 589
MroXI GAANNNNTTC 4 cut(s) 313, 334, 465, 773
MscI TGGCCA 1 cut(s) 589
MseI TTAA 5 cut(s) 360, 425, 602, 681, 1177
Msp20I TGGCCA 1 cut(s) 589
MspI CCGG 4 cut(s) 45, 260, 693, 1111
MspR9I CCNGG 6 cut(s) 45, 260, 591, 693, 783, 1141
Mva1269I GAATGC 3 cut(s) 35, 61, 1009
MvaI CCWGG 3 cut(s) 591, 783, 1141
MvnI CGCG 1 cut(s) 386
MwoI GCNNNNNNNGC 5 cut(s) 14, 18, 77, 114, 1166
NciI CCSGG 3 cut(s) 45, 260, 693
NcoI CCATGG 1 cut(s) 639
NdeII GATC 6 cut(s) 164, 273, 523, 828, 1091, 1104
NlaIII CATG 6 cut(s) 342, 440, 487, 643, 704, 740
NlaIV GGNNCC 5 cut(s) 468, 538, 571, 882, 1093
NmuCI GTSAC 2 cut(s) 144, 205
NspI RCATGY 2 cut(s) 440, 740
NspV TTCGAA 1 cut(s) 1116
PceI AGGCCT 1 cut(s) 422
PciI ACATGT 2 cut(s) 436, 736
PcsI WCGNNNNNNNCGW 2 cut(s) 62, 1062
PctI GAATGC 3 cut(s) 35, 61, 1009
PdmI GAANNNNTTC 4 cut(s) 313, 334, 465, 773
PfeI GAWTC 1 cut(s) 507
PflFI GACNNNGTC 1 cut(s) 1049
PflMI CCANNNNNTGG 1 cut(s) 484
PfoI TCCNGGA 1 cut(s) 781
PkrI GCNGC 7 cut(s) 60, 79, 381, 634, 637, 1171, 1174
PleI GAGTC 1 cut(s) 151
PpsI GAGTC 1 cut(s) 151
PscI ACATGT 2 cut(s) 436, 736
Psp6I CCWGG 3 cut(s) 589, 781, 1139
PspEI GGTNACC 1 cut(s) 205
PspGI CCWGG 3 cut(s) 589, 781, 1139
PspN4I GGNNCC 5 cut(s) 468, 538, 571, 882, 1093
PspPI GGNCC 2 cut(s) 491, 653
PstI CTGCAG 1 cut(s) 637
PsuI RGATCY 1 cut(s) 1091
PsyI GACNNNGTC 1 cut(s) 1049
RsaI GTAC 1 cut(s) 882
RsaNI GTAC 1 cut(s) 881
SaqAI TTAA 5 cut(s) 360, 425, 602, 681, 1177
SatI GCNGC 7 cut(s) 59, 78, 380, 633, 636, 1170, 1173
Sau3AI GATC 6 cut(s) 164, 273, 523, 828, 1091, 1104
Sau96I GGNCC 2 cut(s) 491, 653
SchI GAGTC 1 cut(s) 152
ScrFI CCNGG 6 cut(s) 45, 260, 591, 693, 783, 1141
SduI GDGCHC 1 cut(s) 572
SfcI CTRYAG 1 cut(s) 633
SfuI TTCGAA 1 cut(s) 1116
SinI GGWCC 2 cut(s) 491, 653
SmlI CTYRAG 1 cut(s) 1077
SmoI CTYRAG 1 cut(s) 1077
Sse9I AATT 6 cut(s) 219, 303, 599, 645, 787, 900
SseBI AGGCCT 1 cut(s) 422
SsiI CCGC 3 cut(s) 386, 1011, 1173
SspMI CTAG 3 cut(s) 30, 657, 1043
StuI AGGCCT 1 cut(s) 422
StyD4I CCNGG 6 cut(s) 43, 258, 589, 691, 781, 1139
StyI CCWWGG 1 cut(s) 639
TaaI ACNGT 1 cut(s) 565
TaqI TCGA 5 cut(s) 53, 65, 717, 1065, 1116
TasI AATT 6 cut(s) 219, 303, 599, 645, 787, 900
TauI GCSGC 1 cut(s) 1175
TfiI GAWTC 1 cut(s) 507
Tru1I TTAA 5 cut(s) 360, 425, 602, 681, 1177
Tru9I TTAA 5 cut(s) 360, 425, 602, 681, 1177
TscAI CASTG 6 cut(s) 78, 517, 534, 568, 864, 874
TseFI GTSAC 2 cut(s) 144, 205
TseI GCWGC 6 cut(s) 58, 77, 379, 632, 635, 1169
Tsp45I GTSAC 2 cut(s) 144, 205
TspDTI ATGAA 2 cut(s) 327, 735
TspRI CASTG 6 cut(s) 78, 517, 534, 568, 864, 874
Tth111I GACNNNGTC 1 cut(s) 1049
Van91I CCANNNNNTGG 1 cut(s) 484
VpaK11BI GGWCC 2 cut(s) 491, 653
XagI CCTNNNNNAGG 1 cut(s) 248
XapI RAATTY 2 cut(s) 645, 787
XceI RCATGY 2 cut(s) 440, 740
XcmI CCANNNNNNNNNTGG 1 cut(s) 562
XmnI GAANNNNTTC 4 cut(s) 313, 334, 465, 773
XspI CTAG 3 cut(s) 30, 657, 1043
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.