Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0003169

Physical Location & Seq

Genomic Coordinates Reverse (-)

7628996 .. 7632184

Gene Structure 3189 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0088800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

ATGGACGGCGATCATCACAACCCCAATTCTGAACTCGAAGTCGACGCTTTGTCTTCTAGGGTTTCCGATTTCTCGCTACACGAGGACATCCCCAATTCGAAAGTTCAATACCCGCCGATTGATAGAGAAGATCAAAATCATACAGAGAATAAGTATAGTGATGAACCGAATATGACAGAATCTAGAGAAGATGACTGTGAGGTACGTGGGAAGGATAACGAGGCATCAGAAGCCTGCCGTTCGGAGCAAAAGAAGTACTTTTATTATGATGCTCCACATTATGAGGATACGGGGGTTTGGATACCTGTTTCCGTTCCCCCTATGTTGCAAACGGAGCATGAAGAGTGGGCGAAAGGTTTTTCCTCAAATGGGGGGTTCTTTCCCGAGAATGTCATGGGTTGGGGCCAGTTTATTGGAGATGAGAAGGAGATGACTATGTGGGATGTGATGGTGGAGATGTTGCTTGCGGCCCGTGGGAAAGTAAGTTCATTGGCTTCCCCTGATATATATGGATGTAGAGTTTCATGGATGTCCGACAATCTACTTGAGCAAGCATGGCAGGAAATGGCCCAAACACTCACAGATGCTAACCTGGCTCATGTACACGAAATTCTGGATGCAGATCCACCAAAGTGGCTGGCCGATAGTTCTGCGTCTTCTTGTATGCTCTGTGGCGTGCAGTTTCATCCAATCATGTGCTCTAGGCATCACTGTCGGTTTTGTGGAGGAATATTTTGTGGTGATTGTTCCAAGGGAAGGAGTCTGTTGCCCAAAAAGTTTCGTGTTGCAGATCCTCAGCGAGTCTGTGATGTATGCTGTGTAAGACTTGAGTCTGTACAGCCGCATTTAATGGACCAAGTAAGTCATGCTGCTCAGGTGCCAACCCATGATCTTACTGACCTTAGCACTTTAAGATCATGGGTTAATATTCCTTGGGGACGGTCCATGGAGTATGAGATATATAAGGCGACAAATGCAATCCAGTGTTATAAGAAGGTATGTGCCCTAAAGCCTGAGAAGTCAATTCCCGATGCCATTCTAAGACAAGCAAAAGGCCTTGCAATAATCACTGCTGTCAAGGTTGGAGTTATGGTTACCTACAATATAGGTACAGGACTTGTGATTGCTCGCAGAGAAGATGGTTCTTGGTCCCCTCCATCTGCTGTCTCAACCTTCGGTGTAGGATGGGGAGCACAGGCCGGAGGGGAGTTGACAGACTTTGTCATTATTTTGAGAACAAGTGATGCTGTAAAGACATTCAGTGGTAATGCTCATCTGTCAGTAGGAGCCGGCTTGAGTGCTGCAGTTGGGCCCTTTGGAAGGGCAGCTGAAGCTGATTTTCGAGCAGGTGATGGTGGTTATGCTGCTTGTTATACGTACAGCTGCAGTAAAGGCGCATTTGTTGGATGTTCACTTGAAGGCAGCATTGTAACCACCCGCACACAGGTGAATTCTCAATTTTATGGCAGCCAGTCACTGAATGCATCAGATATACTTCTTGGCTCGTTGCCTAAGCCACCTGCGGCTGCCACTCTCTATCGTGCACTTTCAGATCTATATCAGAAGCTTGATCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0005984 GO:0005985 GO:0005986 GO:0005996 GO:0006000 GO:0006002 GO:0006006 GO:0006073 GO:0006094 GO:0006793 GO:0006796 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009311 GO:0009312 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009941 GO:0009987 GO:0015977 GO:0015979 GO:0016051 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019203 GO:0019252 GO:0019253 GO:0019318 GO:0019319 GO:0019637 GO:0019685 GO:0030388 GO:0031967 GO:0031975 GO:0033692 GO:0034637 GO:0034645 GO:0042132 GO:0042578 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046351 GO:0046364 GO:0048046 GO:0050278 GO:0050308 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0098542 GO:1901135 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00710 ko01100 ko01120 ko01200 map00710 map01100 map01120 map01200

Pfam Domains

Protein Families

FBPase

Protein Analysis

525

Amino Acids

57.68

Weight (kDa)

5.2

Isoelectric Point (pI)

39.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FYVE	PF01363	211 - 277	1.9e-16	FYVE zinc finger
Ysc84	PF04366	393 - 518	1.5e-40	Las17-binding protein actin regulator

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55800
fragaria_vesca	FvH4_3g15380 FvH4_7g23960
malus_domestica	MD01G1146300.v1.1 MD05G1223500.v1.1 MD07G1213200.v1.1 MD10G1204900.v1.1 MD10G1205000.v1.1
prunus_persica	Prupe.2G245700_v2.0.a1 Prupe.2G245700_v2.0.a1 Prupe.4G136700_v2.0.a1
pyrus_communis	pycom01g16550 pycom05g20640 pycom07g19600 pycom10g17540
rosa_chinensis	RchiOBHm_Chr1g0369301 RchiOBHm_Chr5g0025831
rosa_laevigata	RLG00000027139 RLG00000032880
rosa_multiflora	Rmu_sc0000968.1_g000014 Rmu_sc0001482.1_g000011
rosa_roxburghii	Rroxscaffold_1G00053370 Rroxscaffold_1G00054370 Rroxscaffold_4G00287750
rosa_rugosa	Rorug01G0349400 Rorug05G0088800 Rorug05G0088900
rosa_samantha	Rh1AG356600 Rh1BG320600 Rh1CG334600 Rh1DG351300 Rh5AG180900 Rh5BG179500 Rh5CG197300 Rh5DG179200
rosa_wichuraiana	Rw1G031480 Rw5G016410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	990
AarI	CACCTGC	2 cut(s)	1337, 1528
Acc36I	ACCTGC	2 cut(s)	1337, 1528
AccB1I	GGYRCC	1 cut(s)	877
AccI	GTMKAC	1 cut(s)	42
AciI	CCGC	5 cut(s)	113, 467, 842, 1438, 1523
AclWI	GGATC	2 cut(s)	617, 785
AcoI	YGGCCR	1 cut(s)	639
AcsI	RAATTY	2 cut(s)	609, 1450
AcuI	CTGAAG	1 cut(s)	1350
AfaI	GTAC	6 cut(s)	204, 257, 603, 837, 1111, 1379
AfiI	CCNNNNNNNGG	4 cut(s)	369, 756, 1320, 1444
AgsI	TTSAA	2 cut(s)	107, 1418
AhdI	GACNNNNNGTC	1 cut(s)	49
AjnI	CCWGG	1 cut(s)	591
AleI	CACNNNNGTG	2 cut(s)	631, 1445
AloI	GAACNNNNNNTCC	2 cut(s)	469, 501
AluBI	AGCT	4 cut(s)	1328, 1334, 1383, 1567
AluI	AGCT	4 cut(s)	1328, 1334, 1383, 1567
Alw21I	GWGCWC	3 cut(s)	701, 1195, 1546
Alw26I	GTCTC	1 cut(s)	1171
Alw44I	GTGCAC	1 cut(s)	1542
AlwI	GGATC	2 cut(s)	617, 785
AlwNI	CAGNNNCTG	1 cut(s)	1477
Ama87I	CYCGRG	1 cut(s)	383
AoxI	GGCC	7 cut(s)	403, 468, 567, 639, 1054, 1197, 1310
ApaI	GGGCCC	1 cut(s)	1314
ApaLI	GTGCAC	1 cut(s)	1542
ApeKI	GCWGC	8 cut(s)	869, 1301, 1325, 1364, 1383, 1422, 1467, 1526
ApoI	RAATTY	2 cut(s)	609, 1450
AspLEI	GCGC	1 cut(s)	1397
AspS9I	GGNCC	8 cut(s)	403, 469, 568, 853, 942, 1149, 1310, 1311
AsuHPI	GGTGA	3 cut(s)	752, 1361, 1459
AsuII	TTCGAA	1 cut(s)	98
AvaI	CYCGRG	1 cut(s)	383
AvaII	GGWCC	3 cut(s)	853, 942, 1149
BaeGI	GKGCMC	3 cut(s)	1006, 1314, 1546
BaeI	ACNNNNGTAYC	2 cut(s)	279, 312
BanI	GGYRCC	1 cut(s)	877
BanII	GRGCYC	1 cut(s)	1314
BauI	CACGAG	1 cut(s)	80
BbsI	GAAGAC	2 cut(s)	45, 648
Bbv12I	GWGCWC	3 cut(s)	701, 1195, 1546
BbvCI	CCTCAGC	1 cut(s)	795
BbvI	GCAGC	8 cut(s)	856, 1288, 1337, 1351, 1370, 1434, 1479, 1513
BccI	CCATC	5 cut(s)	442, 1133, 1165, 1179, 1346
BceAI	ACGGC	2 cut(s)	22, 222
BcgI	CGANNNNNNTGC	4 cut(s)	632, 666, 695, 729
BciT130I	CCWGG	1 cut(s)	593
BciVI	GTATCC	2 cut(s)	280, 294
BcoDI	GTCTC	1 cut(s)	1171
BfaI	CTAG	3 cut(s)	57, 183, 702
BfmI	CTRYAG	2 cut(s)	1302, 1384
BfuAI	ACCTGC	2 cut(s)	1337, 1528
BfuI	GTATCC	2 cut(s)	280, 294
BglII	AGATCT	1 cut(s)	1552
BmcAI	AGTACT	1 cut(s)	257
Bme1390I	CCNGG	1 cut(s)	593
Bme18I	GGWCC	3 cut(s)	853, 942, 1149
BmeRI	GACNNNNNGTC	1 cut(s)	49
BmeT110I	CYCGRG	1 cut(s)	383
BmgT120I	GGNCC	8 cut(s)	403, 469, 568, 853, 942, 1149, 1310, 1311
BmiI	GGNNCC	5 cut(s)	404, 879, 1151, 1288, 1312
BmrFI	CCNGG	1 cut(s)	593
BmsI	GCATC	8 cut(s)	233, 259, 574, 607, 715, 1021, 1234, 1493
BoxI	GACNNNNGTC	1 cut(s)	829
BpiI	GAAGAC	2 cut(s)	45, 648
Bpu10I	CCTNAGC	4 cut(s)	795, 873, 902, 1512
Bpu14I	TTCGAA	1 cut(s)	98
BpuEI	CTTGAG	3 cut(s)	566, 848, 1315
BsaAI	YACGTR	2 cut(s)	206, 1377
BsaBI	GATNNNNATC	3 cut(s)	135, 621, 1557
BsaJI	CCNNGG	4 cut(s)	472, 750, 932, 945
BsaXI	ACNNNNNCTCC	2 cut(s)	1077, 1107
Bsc4I	CCNNNNNNNGG	4 cut(s)	369, 756, 1320, 1444
Bse118I	RCCGGY	1 cut(s)	1289
Bse1I	ACTGG	3 cut(s)	406, 982, 1471
Bse8I	GATNNNNATC	3 cut(s)	135, 621, 1557
BseBI	CCWGG	1 cut(s)	593
BseDI	CCNNGG	4 cut(s)	472, 750, 932, 945
BseGI	GGATG	8 cut(s)	87, 448, 518, 534, 622, 685, 1190, 1412
BseJI	GATNNNNATC	3 cut(s)	135, 621, 1557
BseLI	CCNNNNNNNGG	4 cut(s)	369, 756, 1320, 1444
BseMII	CTCAG	3 cut(s)	809, 887, 1005
BseNI	ACTGG	3 cut(s)	406, 982, 1471
BseSI	GKGCMC	3 cut(s)	1006, 1314, 1546
BseXI	GCAGC	8 cut(s)	856, 1288, 1337, 1351, 1370, 1434, 1479, 1513
BsgI	GTGCAG	1 cut(s)	698
BshFI	GGCC	7 cut(s)	405, 470, 569, 641, 1056, 1199, 1312
BshNI	GGYRCC	1 cut(s)	877
BsiHKAI	GWGCWC	3 cut(s)	701, 1195, 1546
BsiHKCI	CYCGRG	1 cut(s)	383
BsiSI	CCGG	2 cut(s)	1200, 1290
BslFI	GGGAC	2 cut(s)	951, 1135
BslI	CCNNNNNNNGG	4 cut(s)	369, 756, 1320, 1444
BsmAI	GTCTC	1 cut(s)	1171
BsmFI	GGGAC	2 cut(s)	951, 1135
BsmI	GAATGC	1 cut(s)	1486
BsnI	GGCC	7 cut(s)	405, 470, 569, 641, 1056, 1199, 1312
BsoBI	CYCGRG	1 cut(s)	383
Bsp119I	TTCGAA	1 cut(s)	98
Bsp120I	GGGCCC	1 cut(s)	1310
Bsp1286I	GDGCHC	5 cut(s)	701, 1006, 1195, 1314, 1546
Bsp1407I	TGTACA	2 cut(s)	601, 835
Bsp143I	GATC	8 cut(s)	10, 130, 622, 790, 889, 914, 1552, 1570
Bsp19I	CCATGG	1 cut(s)	945
BspACI	CCGC	5 cut(s)	113, 467, 842, 1438, 1523
BspANI	GGCC	7 cut(s)	405, 470, 569, 641, 1056, 1199, 1312
BspCNI	CTCAG	3 cut(s)	808, 886, 1006
BspLI	GGNNCC	5 cut(s)	404, 879, 1151, 1288, 1312
BspMAI	CTGCAG	2 cut(s)	1306, 1388
BspMI	ACCTGC	2 cut(s)	1337, 1528
BspPI	GGATC	2 cut(s)	617, 785
BspT104I	TTCGAA	1 cut(s)	98
BspT107I	GGYRCC	1 cut(s)	877
BsrFI	RCCGGY	1 cut(s)	1289
BsrGI	TGTACA	2 cut(s)	601, 835
BsrI	ACTGG	3 cut(s)	406, 982, 1471
BssAI	RCCGGY	1 cut(s)	1289
BssECI	CCNNGG	4 cut(s)	472, 750, 932, 945
BssMI	GATC	8 cut(s)	10, 130, 622, 790, 889, 914, 1552, 1570
BssSI	CACGAG	1 cut(s)	80
BssT1I	CCWWGG	3 cut(s)	750, 932, 945
Bst2BI	CACGAG	1 cut(s)	80
Bst2UI	CCWGG	1 cut(s)	593
Bst4CI	ACNGT	3 cut(s)	197, 713, 942
Bst6I	CTCTTC	1 cut(s)	336
BstAUI	TGTACA	2 cut(s)	601, 835
BstBAI	YACGTR	2 cut(s)	206, 1377
BstBI	TTCGAA	1 cut(s)	98
BstC8I	GCNNGC	7 cut(s)	235, 465, 552, 639, 677, 1129, 1291
BstDEI	CTNAG	6 cut(s)	795, 873, 902, 1014, 1040, 1512
BstDSI	CCRYGG	2 cut(s)	472, 945
BstEII	GGTNACC	1 cut(s)	1093
BstENI	CCTNNNNNAGG	1 cut(s)	1318
BstF5I	GGATG	8 cut(s)	87, 448, 518, 534, 622, 685, 1190, 1412
BstHHI	GCGC	1 cut(s)	1397
BstKTI	GATC	8 cut(s)	13, 133, 625, 793, 892, 917, 1555, 1573
BstMAI	GTCTC	1 cut(s)	1171
BstMBI	GATC	8 cut(s)	10, 130, 622, 790, 889, 914, 1552, 1570
BstMWI	GCNNNNNNNGC	7 cut(s)	230, 334, 556, 593, 974, 1331, 1392
BstNI	CCWGG	1 cut(s)	593
BstPAI	GACNNNNGTC	1 cut(s)	829
BstPI	GGTNACC	1 cut(s)	1093
BstSCI	CCNGG	1 cut(s)	591
BstSFI	CTRYAG	2 cut(s)	1302, 1384
BstSLI	GKGCMC	3 cut(s)	1006, 1314, 1546
BstSNI	TACGTA	1 cut(s)	1377
BstV1I	GCAGC	8 cut(s)	856, 1288, 1337, 1351, 1370, 1434, 1479, 1513
BstV2I	GAAGAC	2 cut(s)	45, 648
BstX2I	RGATCY	3 cut(s)	622, 790, 1552
BstXI	CCANNNNNNTGG	2 cut(s)	413, 633
BstYI	RGATCY	3 cut(s)	622, 790, 1552
BsuI	GTATCC	2 cut(s)	280, 294
BsuRI	GGCC	7 cut(s)	405, 470, 569, 641, 1056, 1199, 1312
BtgI	CCRYGG	2 cut(s)	472, 945
BtsCI	GGATG	8 cut(s)	87, 448, 518, 534, 622, 685, 1190, 1412
BtsI	GCAGTG	1 cut(s)	1068
BtsIMutI	CAGTG	5 cut(s)	709, 989, 1068, 1267, 1475
BveI	ACCTGC	2 cut(s)	1337, 1528
Cac8I	GCNNGC	7 cut(s)	235, 465, 552, 639, 677, 1129, 1291
CaiI	CAGNNNCTG	1 cut(s)	1477
CfoI	GCGC	1 cut(s)	1397
Cfr10I	RCCGGY	1 cut(s)	1289
Cfr13I	GGNCC	8 cut(s)	403, 469, 568, 853, 942, 1149, 1310, 1311
CseI	GACGC	2 cut(s)	53, 642
Csp6I	GTAC	6 cut(s)	203, 256, 602, 836, 1110, 1378
CviQI	GTAC	6 cut(s)	203, 256, 602, 836, 1110, 1378
DdeI	CTNAG	6 cut(s)	795, 873, 902, 1014, 1040, 1512
DpnI	GATC	8 cut(s)	12, 132, 624, 792, 891, 916, 1554, 1572
DpnII	GATC	8 cut(s)	10, 130, 622, 790, 889, 914, 1552, 1570
DriI	GACNNNNNGTC	1 cut(s)	49
EaeI	YGGCCR	1 cut(s)	639
Eam1104I	CTCTTC	1 cut(s)	336
Eam1105I	GACNNNNNGTC	1 cut(s)	49
EarI	CTCTTC	1 cut(s)	336
Eco105I	TACGTA	1 cut(s)	1377
Eco130I	CCWWGG	3 cut(s)	750, 932, 945
Eco147I	AGGCCT	1 cut(s)	1056
Eco24I	GRGCYC	1 cut(s)	1314
Eco47I	GGWCC	3 cut(s)	853, 942, 1149
Eco57I	CTGAAG	1 cut(s)	1350
Eco88I	CYCGRG	1 cut(s)	383
Eco91I	GGTNACC	1 cut(s)	1093
EcoNI	CCTNNNNNAGG	1 cut(s)	1318
EcoO109I	RGGNCCY	1 cut(s)	1311
EcoO65I	GGTNACC	1 cut(s)	1093
EcoRI	GAATTC	1 cut(s)	1450
EcoRII	CCWGG	1 cut(s)	591
EcoT14I	CCWWGG	3 cut(s)	750, 932, 945
EcoT22I	ATGCAT	1 cut(s)	1486
EcoT38I	GRGCYC	1 cut(s)	1314
ErhI	CCWWGG	3 cut(s)	750, 932, 945
FalI	AAGNNNNNCTT	2 cut(s)	242, 274
FaqI	GGGAC	2 cut(s)	951, 1135
FauI	CCCGC	2 cut(s)	120, 1445
FblI	GTMKAC	1 cut(s)	42
FokI	GGATG	8 cut(s)	74, 455, 525, 541, 629, 672, 1197, 1419
FriOI	GRGCYC	1 cut(s)	1314
FspBI	CTAG	3 cut(s)	57, 183, 702
GlaI	GCGC	1 cut(s)	1396
HaeIII	GGCC	7 cut(s)	405, 470, 569, 641, 1056, 1199, 1312
HapII	CCGG	2 cut(s)	1200, 1290
HgaI	GACGC	2 cut(s)	53, 642
HhaI	GCGC	1 cut(s)	1397
Hin6I	GCGC	1 cut(s)	1395
HinP1I	GCGC	1 cut(s)	1395
HincII	GTYRAC	2 cut(s)	43, 1212
HindII	GTYRAC	2 cut(s)	43, 1212
HindIII	AAGCTT	1 cut(s)	1565
HinfI	GANTC	4 cut(s)	179, 760, 801, 830
HpaII	CCGG	2 cut(s)	1200, 1290
HphI	GGTGA	3 cut(s)	752, 1361, 1459
Hpy166II	GTNNAC	5 cut(s)	43, 604, 1212, 1412, 1544
Hpy188I	TCNGA	8 cut(s)	31, 67, 229, 244, 535, 1489, 1552, 1563
Hpy188III	TCNNGA	4 cut(s)	183, 383, 614, 1028
Hpy8I	GTNNAC	5 cut(s)	43, 604, 1212, 1412, 1544
Hpy99I	CGWCG	1 cut(s)	47
HpyAV	CCTTC	7 cut(s)	205, 418, 750, 988, 1183, 1314, 1412
HpyCH4III	ACNGT	3 cut(s)	197, 713, 942
HpyCH4IV	ACGT	2 cut(s)	205, 1376
HpyF10VI	GCNNNNNNNGC	7 cut(s)	230, 334, 556, 593, 974, 1331, 1392
HpyF3I	CTNAG	6 cut(s)	795, 873, 902, 1014, 1040, 1512
HpySE526I	ACGT	2 cut(s)	205, 1376
HspAI	GCGC	1 cut(s)	1395
KroI	GCCGGC	1 cut(s)	1289
KroNI	GCCGGC	1 cut(s)	1291
Kzo9I	GATC	8 cut(s)	10, 130, 622, 790, 889, 914, 1552, 1570
LmnI	GCTCC	5 cut(s)	244, 277, 334, 1190, 1286
Lsp1109I	GCAGC	8 cut(s)	856, 1288, 1337, 1351, 1370, 1434, 1479, 1513
LweI	GCATC	8 cut(s)	233, 259, 574, 607, 715, 1021, 1234, 1493
MaeI	CTAG	3 cut(s)	57, 183, 702
MaeII	ACGT	2 cut(s)	205, 1376
MaeIII	GTNAC	3 cut(s)	1093, 1429, 1473
MalI	GATC	8 cut(s)	12, 132, 624, 792, 891, 916, 1554, 1572
MboI	GATC	8 cut(s)	10, 130, 622, 790, 889, 914, 1552, 1570
MboII	GAAGA	6 cut(s)	45, 140, 200, 353, 648, 1148
MflI	RGATCY	3 cut(s)	622, 790, 1552
MhlI	GDGCHC	5 cut(s)	701, 1006, 1195, 1314, 1546
MluCI	AATT	6 cut(s)	25, 94, 609, 1023, 1450, 1457
MlyI	GAGTC	3 cut(s)	769, 810, 839
MmeI	TCCRAC	3 cut(s)	558, 1063, 1384
MnlI	CCTC	9 cut(s)	76, 193, 214, 277, 373, 719, 804, 1164, 1196
Mph1103I	ATGCAT	1 cut(s)	1486
MroNI	GCCGGC	1 cut(s)	1289
MseI	TTAA	3 cut(s)	848, 911, 924
MslI	CAYNNNNRTG	2 cut(s)	631, 1445
MspA1I	CMGCKG	2 cut(s)	1328, 1383
MspI	CCGG	2 cut(s)	1200, 1290
MspR9I	CCNGG	1 cut(s)	593
Mva1269I	GAATGC	1 cut(s)	1486
MvaI	CCWGG	1 cut(s)	593
MwoI	GCNNNNNNNGC	7 cut(s)	230, 334, 556, 593, 974, 1331, 1392
NaeI	GCCGGC	1 cut(s)	1291
NcoI	CCATGG	1 cut(s)	945
NdeII	GATC	8 cut(s)	10, 130, 622, 790, 889, 914, 1552, 1570
NgoMIV	GCCGGC	1 cut(s)	1289
NlaIV	GGNNCC	5 cut(s)	404, 879, 1151, 1288, 1312
NmuCI	GTSAC	1 cut(s)	1473
NsiI	ATGCAT	1 cut(s)	1486
NspV	TTCGAA	1 cut(s)	98
OliI	CACNNNNGTG	2 cut(s)	631, 1445
PaqCI	CACCTGC	2 cut(s)	1337, 1528
PceI	AGGCCT	1 cut(s)	1056
PctI	GAATGC	1 cut(s)	1486
PdiI	GCCGGC	1 cut(s)	1291
PfeI	GAWTC	1 cut(s)	179
PflFI	GACNNNGTC	1 cut(s)	1220
PleI	GAGTC	3 cut(s)	768, 809, 838
PpsI	GAGTC	3 cut(s)	768, 809, 838
Ppu21I	YACGTR	2 cut(s)	206, 1377
PshAI	GACNNNNGTC	1 cut(s)	829
PsiI	TTATAA	1 cut(s)	990
Psp6I	CCWGG	1 cut(s)	591
PspEI	GGTNACC	1 cut(s)	1093
PspGI	CCWGG	1 cut(s)	591
PspN4I	GGNNCC	5 cut(s)	404, 879, 1151, 1288, 1312
PspOMI	GGGCCC	1 cut(s)	1310
PspPI	GGNCC	8 cut(s)	403, 469, 568, 853, 942, 1149, 1310, 1311
PstI	CTGCAG	2 cut(s)	1306, 1388
PstNI	CAGNNNCTG	1 cut(s)	1477
PsuI	RGATCY	3 cut(s)	622, 790, 1552
PsyI	GACNNNGTC	1 cut(s)	1220
PvuII	CAGCTG	2 cut(s)	1328, 1383
RsaI	GTAC	6 cut(s)	204, 257, 603, 837, 1111, 1379
RsaNI	GTAC	6 cut(s)	203, 256, 602, 836, 1110, 1378
RseI	CAYNNNNRTG	2 cut(s)	631, 1445
SalI	GTCGAC	1 cut(s)	41
SaqAI	TTAA	3 cut(s)	848, 911, 924
Sau3AI	GATC	8 cut(s)	10, 130, 622, 790, 889, 914, 1552, 1570
Sau96I	GGNCC	8 cut(s)	403, 469, 568, 853, 942, 1149, 1310, 1311
ScaI	AGTACT	1 cut(s)	257
SchI	GAGTC	3 cut(s)	769, 810, 839
ScrFI	CCNGG	1 cut(s)	593
SduI	GDGCHC	5 cut(s)	701, 1006, 1195, 1314, 1546
SfaNI	GCATC	8 cut(s)	233, 259, 574, 607, 715, 1021, 1234, 1493
SfcI	CTRYAG	2 cut(s)	1302, 1384
SfuI	TTCGAA	1 cut(s)	98
SinI	GGWCC	3 cut(s)	853, 942, 1149
SmiMI	CAYNNNNRTG	2 cut(s)	631, 1445
SmlI	CTYRAG	3 cut(s)	545, 827, 1294
SmoI	CTYRAG	3 cut(s)	545, 827, 1294
SnaBI	TACGTA	1 cut(s)	1377
Sse9I	AATT	6 cut(s)	25, 94, 609, 1023, 1450, 1457
SseBI	AGGCCT	1 cut(s)	1056
SsiI	CCGC	5 cut(s)	113, 467, 842, 1438, 1523
SspI	AATATT	2 cut(s)	732, 928
SspMI	CTAG	3 cut(s)	57, 183, 702
StuI	AGGCCT	1 cut(s)	1056
StyD4I	CCNGG	1 cut(s)	591
StyI	CCWWGG	3 cut(s)	750, 932, 945
TaaI	ACNGT	3 cut(s)	197, 713, 942
TaiI	ACGT	2 cut(s)	208, 1379
TaqI	TCGA	4 cut(s)	36, 42, 98, 1342
TasI	AATT	6 cut(s)	25, 94, 609, 1023, 1450, 1457
TatI	WGTACW	3 cut(s)	255, 601, 835
TauI	GCSGC	3 cut(s)	470, 844, 1526
TfiI	GAWTC	1 cut(s)	179
Tru1I	TTAA	3 cut(s)	848, 911, 924
Tru9I	TTAA	3 cut(s)	848, 911, 924
TscAI	CASTG	5 cut(s)	716, 989, 1075, 1267, 1482
TseFI	GTSAC	1 cut(s)	1473
TseI	GCWGC	8 cut(s)	869, 1301, 1325, 1364, 1383, 1422, 1467, 1526
Tsp45I	GTSAC	1 cut(s)	1473
TspDTI	ATGAA	5 cut(s)	177, 354, 477, 513, 674
TspGWI	ACGGA	2 cut(s)	301, 347
TspRI	CASTG	5 cut(s)	716, 989, 1075, 1267, 1482
Tth111I	GACNNNGTC	1 cut(s)	1220
VneI	GTGCAC	1 cut(s)	1542
VpaK11BI	GGWCC	3 cut(s)	853, 942, 1149
XagI	CCTNNNNNAGG	1 cut(s)	1318
XapI	RAATTY	2 cut(s)	609, 1450
XbaI	TCTAGA	1 cut(s)	182
XmiI	GTMKAC	1 cut(s)	42
XspI	CTAG	3 cut(s)	57, 183, 702
ZrmI	AGTACT	1 cut(s)	257
Zsp2I	ATGCAT	1 cut(s)	1486

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.