Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0003169

Physical Location & Seq

Genomic Coordinates Reverse (-)

30408449 .. 30410356

Gene Structure 1908 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1205000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 735 bp

ATGGAAACCAGTGTTGCATGCTATGCCAGGGGAGCTTTTCCAGTGCGGAATAATGTCTCATCTCAGCATTCAAGCTCTCTTTTCTCTCCTGCTTCCATCTCTCCATCCTTCAATTCCAAGGTGTTGAGAACAAGCTCTCTATTTGGGGAATCATTGCAAATGGTGCCAAAGTCATCCCTAAAAGTTTTGAAGACAAAGAACACTTCAATTGTTCCCAAATGTGCAATTGGTGATAGCTTGGAGGAATTCTTAACCAAGGCAACCCCAGACAAGAAATTGATCACATTGTTGATATCAATGGGGGAAGCATTGAGGACCATTGGATATAAAGTGAGGACAGCATCTTGTGGAGGAACAGCATGTGTGAATTCTTTTGGAGATGAGCAGCTTGCTGTGGATATGCTTGCTGATAAGCTTCTTTTTGAGGCCTTAACTTACTCACATGTCTGCAAATATGCTTGTTCTGAAGAAGTTCCTGAGCTCCAAGACATGGGAGGCCCAGTAGAAGGTGGATTTAGTGTTGCTTTTGATCCATTGGATGGATCCAGCATTGTCGACACAAACTTCACAGTGGGGACAATTTTCGGGGTGTGGCCAGGAGATAAGTTAACTGGGATAACTGGAAGAGATCAGGTTGCTGCAGCCATGGGAATTTATGGGCCTCGAACGACATATGTTCTTGCTATTAAAGGCTTCCCCGGCACCCACGAATTCCTTCTTCTTGATGAAGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0005984 GO:0005985 GO:0005986 GO:0005996 GO:0006000 GO:0006002 GO:0006006 GO:0006073 GO:0006094 GO:0006793 GO:0006796 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009311 GO:0009312 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009941 GO:0009987 GO:0015977 GO:0015979 GO:0016051 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019203 GO:0019252 GO:0019253 GO:0019318 GO:0019319 GO:0019637 GO:0019685 GO:0030388 GO:0031967 GO:0031975 GO:0033692 GO:0034637 GO:0034645 GO:0042132 GO:0042578 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046351 GO:0046364 GO:0048046 GO:0050278 GO:0050308 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0098542 GO:1901135 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00710 ko01100 ko01120 ko01200 map00710 map01100 map01120 map01200

Pfam Domains

Protein Families

FBPase

Protein Analysis

245

Amino Acids

25.97

Weight (kDa)

5.44

Isoelectric Point (pI)

33.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FBPase	PF00316	71 - 242	1.9e-54	Fructose-1-6-bisphosphatase, N-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55800
fragaria_vesca	FvH4_3g15380 FvH4_7g23960
malus_domestica	MD01G1146300.v1.1 MD05G1223500.v1.1 MD07G1213200.v1.1 MD10G1204900.v1.1 MD10G1205000.v1.1
prunus_persica	Prupe.2G245700_v2.0.a1 Prupe.2G245700_v2.0.a1 Prupe.4G136700_v2.0.a1
pyrus_communis	pycom01g16550 pycom05g20640 pycom07g19600 pycom10g17540
rosa_chinensis	RchiOBHm_Chr1g0369301 RchiOBHm_Chr5g0025831
rosa_laevigata	RLG00000027139 RLG00000032880
rosa_multiflora	Rmu_sc0000968.1_g000014 Rmu_sc0001482.1_g000011
rosa_roxburghii	Rroxscaffold_1G00053370 Rroxscaffold_1G00054370 Rroxscaffold_4G00287750
rosa_rugosa	Rorug01G0349400 Rorug05G0088800 Rorug05G0088900
rosa_samantha	Rh1AG356600 Rh1BG320600 Rh1CG334600 Rh1DG351300 Rh5AG180900 Rh5BG179500 Rh5CG197300 Rh5DG179200
rosa_wichuraiana	Rw1G031480 Rw5G016410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	163, 701
AccB7I	CCANNNNNTGG	2 cut(s)	490, 539
AccI	GTMKAC	1 cut(s)	555
AciI	CCGC	1 cut(s)	46
AclWI	GGATC	3 cut(s)	524, 537, 550
AcoI	YGGCCR	1 cut(s)	593
AcsI	RAATTY	4 cut(s)	245, 367, 651, 710
AcuI	CTGAAG	1 cut(s)	486
AfiI	CCNNNNNNNGG	3 cut(s)	490, 506, 539
AflIII	ACRYGT	1 cut(s)	442
AgsI	TTSAA	4 cut(s)	72, 112, 190, 207
AjnI	CCWGG	2 cut(s)	26, 595
AluBI	AGCT	7 cut(s)	35, 75, 135, 237, 388, 415, 481
AluI	AGCT	7 cut(s)	35, 75, 135, 237, 388, 415, 481
Alw21I	GWGCWC	1 cut(s)	483
Alw26I	GTCTC	1 cut(s)	61
AlwI	GGATC	3 cut(s)	524, 537, 550
AoxI	GGCC	4 cut(s)	426, 496, 593, 659
ApeKI	GCWGC	3 cut(s)	385, 638, 641
ApoI	RAATTY	4 cut(s)	245, 367, 651, 710
Asp700I	GAANNNNTTC	2 cut(s)	471, 714
AspS9I	GGNCC	3 cut(s)	315, 497, 659
AsuC2I	CCSGG	1 cut(s)	699
AsuHPI	GGTGA	1 cut(s)	242
AvaII	GGWCC	1 cut(s)	315
BalI	TGGCCA	1 cut(s)	595
BamHI	GGATCC	1 cut(s)	542
BanI	GGYRCC	2 cut(s)	163, 701
BanII	GRGCYC	1 cut(s)	483
BbsI	GAAGAC	1 cut(s)	197
Bbv12I	GWGCWC	1 cut(s)	483
BbvI	GCAGC	3 cut(s)	397, 625, 653
BccI	CCATC	3 cut(s)	104, 112, 533
BciT130I	CCWGG	2 cut(s)	28, 597
BclI	TGATCA	1 cut(s)	279
BcnI	CCSGG	1 cut(s)	699
BcoDI	GTCTC	1 cut(s)	61
BfmI	CTRYAG	1 cut(s)	639
BisI	GCNGC	3 cut(s)	386, 639, 642
BlsI	GCNGC	3 cut(s)	387, 640, 643
Bme1390I	CCNGG	3 cut(s)	28, 597, 699
Bme18I	GGWCC	1 cut(s)	315
BmgT120I	GGNCC	3 cut(s)	315, 497, 659
BmiI	GGNNCC	3 cut(s)	165, 544, 703
BmrFI	CCNGG	3 cut(s)	28, 597, 699
BmrI	ACTGGG	2 cut(s)	494, 621
BmsI	GCATC	1 cut(s)	350
BmuI	ACTGGG	2 cut(s)	494, 621
BpiI	GAAGAC	1 cut(s)	197
Bpu10I	CCTNAGC	1 cut(s)	477
BpuMI	CCSGG	1 cut(s)	699
BsaJI	CCNNGG	5 cut(s)	27, 117, 255, 645, 697
BsaXI	ACNNNNNCTCC	2 cut(s)	486, 516
Bsc4I	CCNNNNNNNGG	3 cut(s)	490, 506, 539
Bse1I	ACTGG	5 cut(s)	9, 41, 500, 616, 625
Bse3DI	GCAATG	1 cut(s)	152
BseBI	CCWGG	2 cut(s)	28, 597
BseDI	CCNNGG	5 cut(s)	27, 117, 255, 645, 697
BseGI	GGATG	3 cut(s)	104, 173, 544
BseLI	CCNNNNNNNGG	3 cut(s)	490, 506, 539
BseMI	GCAATG	1 cut(s)	152
BseMII	CTCAG	2 cut(s)	77, 468
BseNI	ACTGG	5 cut(s)	9, 41, 500, 616, 625
BseXI	GCAGC	3 cut(s)	397, 625, 653
BshFI	GGCC	4 cut(s)	428, 498, 595, 661
BshNI	GGYRCC	2 cut(s)	163, 701
BsiHKAI	GWGCWC	1 cut(s)	483
BsiSI	CCGG	1 cut(s)	699
BslFI	GGGAC	1 cut(s)	589
BslI	CCNNNNNNNGG	3 cut(s)	490, 506, 539
BsmAI	GTCTC	1 cut(s)	61
BsmFI	GGGAC	1 cut(s)	589
BsmI	GAATGC	1 cut(s)	67
BsnI	GGCC	4 cut(s)	428, 498, 595, 661
Bsp1286I	GDGCHC	1 cut(s)	483
Bsp143I	GATC	4 cut(s)	279, 529, 542, 628
Bsp19I	CCATGG	1 cut(s)	645
BspACI	CCGC	1 cut(s)	46
BspANI	GGCC	4 cut(s)	428, 498, 595, 661
BspCNI	CTCAG	2 cut(s)	76, 469
BspLI	GGNNCC	3 cut(s)	165, 544, 703
BspMAI	CTGCAG	1 cut(s)	643
BspPI	GGATC	3 cut(s)	524, 537, 550
BspT107I	GGYRCC	2 cut(s)	163, 701
BsrDI	GCAATG	1 cut(s)	152
BsrI	ACTGG	5 cut(s)	9, 41, 500, 616, 625
BssECI	CCNNGG	5 cut(s)	27, 117, 255, 645, 697
BssMI	GATC	4 cut(s)	279, 529, 542, 628
BssT1I	CCWWGG	3 cut(s)	117, 255, 645
Bst2UI	CCWGG	2 cut(s)	28, 597
Bst4CI	ACNGT	1 cut(s)	571
Bst6I	CTCTTC	1 cut(s)	619
BstAPI	GCANNNNNTGC	2 cut(s)	23, 163
BstC8I	GCNNGC	3 cut(s)	19, 390, 405
BstDEI	CTNAG	2 cut(s)	63, 477
BstDSI	CCRYGG	1 cut(s)	645
BstF5I	GGATG	3 cut(s)	104, 173, 544
BstKTI	GATC	4 cut(s)	282, 532, 545, 631
BstMAI	GTCTC	1 cut(s)	61
BstMBI	GATC	4 cut(s)	279, 529, 542, 628
BstMWI	GCNNNNNNNGC	4 cut(s)	23, 32, 163, 699
BstNI	CCWGG	2 cut(s)	28, 597
BstNSI	RCATGY	3 cut(s)	21, 363, 446
BstSCI	CCNGG	3 cut(s)	26, 595, 697
BstSFI	CTRYAG	1 cut(s)	639
BstV1I	GCAGC	3 cut(s)	397, 625, 653
BstV2I	GAAGAC	1 cut(s)	197
BstX2I	RGATCY	1 cut(s)	542
BstYI	RGATCY	1 cut(s)	542
BsuRI	GGCC	4 cut(s)	428, 498, 595, 661
BtgI	CCRYGG	1 cut(s)	645
BtsCI	GGATG	3 cut(s)	104, 173, 544
BtsIMutI	CAGTG	3 cut(s)	16, 48, 576
Cac8I	GCNNGC	3 cut(s)	19, 390, 405
Cfr13I	GGNCC	3 cut(s)	315, 497, 659
CviAII	CATG	5 cut(s)	18, 360, 443, 490, 646
DdeI	CTNAG	2 cut(s)	63, 477
DpnI	GATC	4 cut(s)	281, 531, 544, 630
DpnII	GATC	4 cut(s)	279, 529, 542, 628
EaeI	YGGCCR	1 cut(s)	593
Eam1104I	CTCTTC	1 cut(s)	619
EarI	CTCTTC	1 cut(s)	619
Ecl136II	GAGCTC	1 cut(s)	481
Eco130I	CCWWGG	3 cut(s)	117, 255, 645
Eco147I	AGGCCT	1 cut(s)	428
Eco24I	GRGCYC	1 cut(s)	483
Eco32I	GATATC	1 cut(s)	294
Eco47I	GGWCC	1 cut(s)	315
Eco53kI	GAGCTC	1 cut(s)	481
Eco57I	CTGAAG	1 cut(s)	486
EcoICRI	GAGCTC	1 cut(s)	481
EcoRI	GAATTC	3 cut(s)	245, 367, 710
EcoRII	CCWGG	2 cut(s)	26, 595
EcoRV	GATATC	1 cut(s)	294
EcoT14I	CCWWGG	3 cut(s)	117, 255, 645
EcoT38I	GRGCYC	1 cut(s)	483
ErhI	CCWWGG	3 cut(s)	117, 255, 645
FaeI	CATG	5 cut(s)	21, 363, 446, 493, 649
FaqI	GGGAC	1 cut(s)	589
FatI	CATG	5 cut(s)	17, 359, 442, 489, 645
FauNDI	CATATG	1 cut(s)	673
FbaI	TGATCA	1 cut(s)	279
FblI	GTMKAC	1 cut(s)	555
Fnu4HI	GCNGC	3 cut(s)	386, 639, 642
FokI	GGATG	3 cut(s)	91, 160, 551
FriOI	GRGCYC	1 cut(s)	483
Fsp4HI	GCNGC	3 cut(s)	386, 639, 642
GluI	GCNGC	3 cut(s)	386, 639, 642
HaeIII	GGCC	4 cut(s)	428, 498, 595, 661
HapII	CCGG	1 cut(s)	699
Hin1II	CATG	5 cut(s)	21, 363, 446, 493, 649
HincII	GTYRAC	2 cut(s)	556, 609
HindII	GTYRAC	2 cut(s)	556, 609
HindIII	AAGCTT	1 cut(s)	413
HinfI	GANTC	1 cut(s)	149
HpaI	GTTAAC	1 cut(s)	609
HpaII	CCGG	1 cut(s)	699
HphI	GGTGA	1 cut(s)	242
Hpy166II	GTNNAC	2 cut(s)	556, 609
Hpy188I	TCNGA	1 cut(s)	466
Hpy188III	TCNNGA	2 cut(s)	476, 722
Hpy8I	GTNNAC	2 cut(s)	556, 609
HpyAV	CCTTC	4 cut(s)	118, 500, 722, 725
HpyCH4III	ACNGT	1 cut(s)	571
HpyCH4V	TGCA	5 cut(s)	17, 157, 224, 450, 641
HpyF10VI	GCNNNNNNNGC	4 cut(s)	23, 32, 163, 699
HpyF3I	CTNAG	2 cut(s)	63, 477
Hsp92II	CATG	5 cut(s)	21, 363, 446, 493, 649
Ksp22I	TGATCA	1 cut(s)	279
KspAI	GTTAAC	1 cut(s)	609
Kzo9I	GATC	4 cut(s)	279, 529, 542, 628
LmnI	GCTCC	2 cut(s)	32, 486
Lsp1109I	GCAGC	3 cut(s)	397, 625, 653
LweI	GCATC	1 cut(s)	350
MalI	GATC	4 cut(s)	281, 531, 544, 630
MboI	GATC	4 cut(s)	279, 529, 542, 628
MboII	GAAGA	4 cut(s)	202, 479, 636, 710
MfeI	CAATTG	2 cut(s)	207, 225
MflI	RGATCY	1 cut(s)	542
MhlI	GDGCHC	1 cut(s)	483
MlsI	TGGCCA	1 cut(s)	595
MluCI	AATT	9 cut(s)	112, 207, 225, 245, 275, 367, 579, 651, 710
MluNI	TGGCCA	1 cut(s)	595
MnlI	CCTC	7 cut(s)	235, 306, 327, 344, 418, 488, 672
Mox20I	TGGCCA	1 cut(s)	595
MroXI	GAANNNNTTC	2 cut(s)	471, 714
MscI	TGGCCA	1 cut(s)	595
MseI	TTAA	4 cut(s)	251, 431, 608, 687
Msp20I	TGGCCA	1 cut(s)	595
MspI	CCGG	1 cut(s)	699
MspR9I	CCNGG	3 cut(s)	28, 597, 699
MunI	CAATTG	2 cut(s)	207, 225
Mva1269I	GAATGC	1 cut(s)	67
MvaI	CCWGG	2 cut(s)	28, 597
MwoI	GCNNNNNNNGC	4 cut(s)	23, 32, 163, 699
NciI	CCSGG	1 cut(s)	699
NcoI	CCATGG	1 cut(s)	645
NdeI	CATATG	1 cut(s)	673
NdeII	GATC	4 cut(s)	279, 529, 542, 628
NlaIII	CATG	5 cut(s)	21, 363, 446, 493, 649
NlaIV	GGNNCC	3 cut(s)	165, 544, 703
NspI	RCATGY	3 cut(s)	21, 363, 446
PaeI	GCATGC	1 cut(s)	21
PceI	AGGCCT	1 cut(s)	428
PciI	ACATGT	1 cut(s)	442
PctI	GAATGC	1 cut(s)	67
PdmI	GAANNNNTTC	2 cut(s)	471, 714
PfeI	GAWTC	1 cut(s)	149
PflMI	CCANNNNNTGG	2 cut(s)	490, 539
PkrI	GCNGC	3 cut(s)	387, 640, 643
PscI	ACATGT	1 cut(s)	442
Psp124BI	GAGCTC	1 cut(s)	483
Psp6I	CCWGG	2 cut(s)	26, 595
PspGI	CCWGG	2 cut(s)	26, 595
PspN4I	GGNNCC	3 cut(s)	165, 544, 703
PspPI	GGNCC	3 cut(s)	315, 497, 659
PstI	CTGCAG	1 cut(s)	643
PsuI	RGATCY	1 cut(s)	542
SacI	GAGCTC	1 cut(s)	483
SalI	GTCGAC	1 cut(s)	554
SaqAI	TTAA	4 cut(s)	251, 431, 608, 687
SatI	GCNGC	3 cut(s)	386, 639, 642
Sau3AI	GATC	4 cut(s)	279, 529, 542, 628
Sau96I	GGNCC	3 cut(s)	315, 497, 659
ScrFI	CCNGG	3 cut(s)	28, 597, 699
SduI	GDGCHC	1 cut(s)	483
SfaNI	GCATC	1 cut(s)	350
SfcI	CTRYAG	1 cut(s)	639
SinI	GGWCC	1 cut(s)	315
SphI	GCATGC	1 cut(s)	21
Sse9I	AATT	9 cut(s)	112, 207, 225, 245, 275, 367, 579, 651, 710
SseBI	AGGCCT	1 cut(s)	428
SsiI	CCGC	1 cut(s)	46
SstI	GAGCTC	1 cut(s)	483
StuI	AGGCCT	1 cut(s)	428
StyD4I	CCNGG	3 cut(s)	26, 595, 697
StyI	CCWWGG	3 cut(s)	117, 255, 645
TaaI	ACNGT	1 cut(s)	571
TaqI	TCGA	2 cut(s)	555, 664
TasI	AATT	9 cut(s)	112, 207, 225, 245, 275, 367, 579, 651, 710
TfiI	GAWTC	1 cut(s)	149
Tru1I	TTAA	4 cut(s)	251, 431, 608, 687
Tru9I	TTAA	4 cut(s)	251, 431, 608, 687
TscAI	CASTG	3 cut(s)	16, 48, 576
TseI	GCWGC	3 cut(s)	385, 638, 641
TspRI	CASTG	3 cut(s)	16, 48, 576
Van91I	CCANNNNNTGG	2 cut(s)	490, 539
VpaK11BI	GGWCC	1 cut(s)	315
XapI	RAATTY	4 cut(s)	245, 367, 651, 710
XceI	RCATGY	3 cut(s)	21, 363, 446
XmiI	GTMKAC	1 cut(s)	555
XmnI	GAANNNNTTC	2 cut(s)	471, 714

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.