Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0003169

Physical Location & Seq

Genomic Coordinates Reverse (-)

30407499 .. 30408447

Gene Structure 949 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1204900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 465 bp

ATGCAATGGTCAGGAAAATGGCAACATGTTAAGGAGACCACAGAAATTGGTGAAGGAAAGCTCTTCTCTCCTGGAAACTTGAGAGCCACATTTGACAACCCTGACTACGGCAAGTTGATTGACTACTATTTGAAAGAAAAGTACACGTTGAGATACACTGGAGGAATGGTTCCAGATGTTAACCAGATTATTGTAAAGGAGAAGGGTATCTTCACTAATGTGATATCCCCAACTACCAAGGCTAAGCTAAGACTGTTGTTTGAGGTTGCTCCATTAGGGTTGTTGGTTGAGAATGCTGGAGGGTTCAGCAGTGACGGACATCAGTCTGTACTCGATAAAATAGTCGTTAACCTTGACGATCGAACTCAAGTTGCTTATGGATCAAAGAATGAGATTATCCGCTTTGAAGAAACTTTGTATGGATCATCCCGGCTCAAGCGAGTGCCTGTTGGAGCTGCTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0005984 GO:0005985 GO:0005986 GO:0005996 GO:0006000 GO:0006002 GO:0006006 GO:0006073 GO:0006094 GO:0006793 GO:0006796 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009311 GO:0009312 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009941 GO:0009987 GO:0015977 GO:0015979 GO:0016051 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019203 GO:0019252 GO:0019253 GO:0019318 GO:0019319 GO:0019637 GO:0019685 GO:0030388 GO:0031967 GO:0031975 GO:0033692 GO:0034637 GO:0034645 GO:0042132 GO:0042578 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046351 GO:0046364 GO:0048046 GO:0050278 GO:0050308 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0098542 GO:1901135 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00710 ko01100 ko01120 ko01200 map00710 map01100 map01120 map01200

Pfam Domains

Protein Families

FBPase

Protein Analysis

155

Amino Acids

17.17

Weight (kDa)

8.73

Isoelectric Point (pI)

24.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FBPase_C	PF18913	18 - 138	7.7e-37	Fructose-1-6-bisphosphatase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55800
fragaria_vesca	FvH4_3g15380 FvH4_7g23960
malus_domestica	MD01G1146300.v1.1 MD05G1223500.v1.1 MD07G1213200.v1.1 MD10G1204900.v1.1 MD10G1205000.v1.1
prunus_persica	Prupe.2G245700_v2.0.a1 Prupe.2G245700_v2.0.a1 Prupe.4G136700_v2.0.a1
pyrus_communis	pycom01g16550 pycom05g20640 pycom07g19600 pycom10g17540
rosa_chinensis	RchiOBHm_Chr1g0369301 RchiOBHm_Chr5g0025831
rosa_laevigata	RLG00000027139 RLG00000032880
rosa_multiflora	Rmu_sc0000968.1_g000014 Rmu_sc0001482.1_g000011
rosa_roxburghii	Rroxscaffold_1G00053370 Rroxscaffold_1G00054370 Rroxscaffold_4G00287750
rosa_rugosa	Rorug01G0349400 Rorug05G0088800 Rorug05G0088900
rosa_samantha	Rh1AG356600 Rh1BG320600 Rh1CG334600 Rh1DG351300 Rh5AG180900 Rh5BG179500 Rh5CG197300 Rh5DG179200
rosa_wichuraiana	Rw1G031480 Rw5G016410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	400
AclWI	GGATC	2 cut(s)	388, 430
AfaI	GTAC	2 cut(s)	143, 330
AfiI	CCNNNNNNNGG	1 cut(s)	107
AflIII	ACRYGT	2 cut(s)	25, 144
AgsI	TTSAA	2 cut(s)	133, 407
AjnI	CCWGG	1 cut(s)	70
AleI	CACNNNNGTG	1 cut(s)	218
AloI	GAACNNNNNNTCC	2 cut(s)	153, 185
AluBI	AGCT	3 cut(s)	61, 247, 455
AluI	AGCT	3 cut(s)	61, 247, 455
Alw26I	GTCTC	1 cut(s)	29
AlwI	GGATC	2 cut(s)	388, 430
ApeKI	GCWGC	2 cut(s)	455, 458
AsuC2I	CCSGG	1 cut(s)	430
AsuHPI	GGTGA	1 cut(s)	62
BbvI	GCAGC	2 cut(s)	442, 445
BceAI	ACGGC	1 cut(s)	124
BciT130I	CCWGG	1 cut(s)	72
BcnI	CCSGG	1 cut(s)	430
BcoDI	GTCTC	1 cut(s)	29
BisI	GCNGC	2 cut(s)	456, 459
BlpI	GCTNAGC	1 cut(s)	243
BlsI	GCNGC	2 cut(s)	457, 460
Bme1390I	CCNGG	2 cut(s)	72, 430
BmiI	GGNNCC	1 cut(s)	171
BmrFI	CCNGG	2 cut(s)	72, 430
BoxI	GACNNNNGTC	1 cut(s)	322
BpmI	CTGGAG	2 cut(s)	180, 318
Bpu1102I	GCTNAGC	1 cut(s)	243
BpuEI	CTTGAG	3 cut(s)	100, 351, 419
BpuMI	CCSGG	1 cut(s)	430
BsaI	GGTCTC	1 cut(s)	29
BsaJI	CCNNGG	1 cut(s)	237
BsaXI	ACNNNNNCTCC	2 cut(s)	153, 183
Bsc4I	CCNNNNNNNGG	1 cut(s)	107
Bse1I	ACTGG	1 cut(s)	163
Bse3DI	GCAATG	1 cut(s)	11
BseBI	CCWGG	1 cut(s)	72
BseDI	CCNNGG	1 cut(s)	237
BseGI	GGATG	1 cut(s)	425
BseLI	CCNNNNNNNGG	1 cut(s)	107
BseMI	GCAATG	1 cut(s)	11
BseNI	ACTGG	1 cut(s)	163
BseXI	GCAGC	2 cut(s)	442, 445
Bsh1285I	CGRYCG	1 cut(s)	361
BsiEI	CGRYCG	1 cut(s)	361
BsiSI	CCGG	1 cut(s)	430
BslI	CCNNNNNNNGG	1 cut(s)	107
BsmAI	GTCTC	1 cut(s)	29
BsmI	GAATGC	1 cut(s)	298
Bso31I	GGTCTC	1 cut(s)	29
Bsp143I	GATC	3 cut(s)	358, 380, 422
Bsp1720I	GCTNAGC	1 cut(s)	243
BspACI	CCGC	1 cut(s)	400
BspLI	GGNNCC	1 cut(s)	171
BspPI	GGATC	2 cut(s)	388, 430
BspQI	GCTCTTC	1 cut(s)	68
BspTNI	GGTCTC	1 cut(s)	29
BsrDI	GCAATG	1 cut(s)	11
BsrI	ACTGG	1 cut(s)	163
BssECI	CCNNGG	1 cut(s)	237
BssMI	GATC	3 cut(s)	358, 380, 422
BssT1I	CCWWGG	1 cut(s)	237
Bst2UI	CCWGG	1 cut(s)	72
Bst4CI	ACNGT	1 cut(s)	255
Bst6I	CTCTTC	1 cut(s)	68
BstDEI	CTNAG	3 cut(s)	243, 248, 462
BstF5I	GGATG	1 cut(s)	425
BstKTI	GATC	3 cut(s)	361, 383, 425
BstMAI	GTCTC	1 cut(s)	29
BstMBI	GATC	3 cut(s)	358, 380, 422
BstMCI	CGRYCG	1 cut(s)	361
BstNI	CCWGG	1 cut(s)	72
BstNSI	RCATGY	1 cut(s)	29
BstPAI	GACNNNNGTC	1 cut(s)	322
BstSCI	CCNGG	2 cut(s)	70, 428
BstV1I	GCAGC	2 cut(s)	442, 445
BtsCI	GGATG	1 cut(s)	425
BtsI	GCAGTG	1 cut(s)	316
BtsIMutI	CAGTG	2 cut(s)	156, 316
Csp6I	GTAC	2 cut(s)	142, 329
CspCI	CAANNNNNGTGG	2 cut(s)	28, 63
CviAII	CATG	1 cut(s)	26
CviJI	RGCY	6 cut(s)	61, 86, 242, 247, 433, 455
CviKI_1	RGCY	6 cut(s)	61, 86, 242, 247, 433, 455
CviQI	GTAC	2 cut(s)	142, 329
DdeI	CTNAG	3 cut(s)	243, 248, 462
DpnI	GATC	3 cut(s)	360, 382, 424
DpnII	GATC	3 cut(s)	358, 380, 422
Eam1104I	CTCTTC	1 cut(s)	68
EarI	CTCTTC	1 cut(s)	68
Eco130I	CCWWGG	1 cut(s)	237
Eco31I	GGTCTC	1 cut(s)	29
Eco32I	GATATC	1 cut(s)	225
EcoRII	CCWGG	1 cut(s)	70
EcoRV	GATATC	1 cut(s)	225
EcoT14I	CCWWGG	1 cut(s)	237
ErhI	CCWWGG	1 cut(s)	237
FaeI	CATG	1 cut(s)	29
FaiI	YATR	3 cut(s)	27, 378, 420
FalI	AAGNNNNNCTT	2 cut(s)	194, 226
FatI	CATG	1 cut(s)	25
Fnu4HI	GCNGC	2 cut(s)	456, 459
FokI	GGATG	1 cut(s)	412
Fsp4HI	GCNGC	2 cut(s)	456, 459
GluI	GCNGC	2 cut(s)	456, 459
GsuI	CTGGAG	2 cut(s)	180, 318
HapII	CCGG	1 cut(s)	430
Hin1II	CATG	1 cut(s)	29
HincII	GTYRAC	2 cut(s)	181, 349
HindII	GTYRAC	2 cut(s)	181, 349
HpaI	GTTAAC	2 cut(s)	181, 349
HpaII	CCGG	1 cut(s)	430
HphI	GGTGA	1 cut(s)	62
Hpy166II	GTNNAC	3 cut(s)	144, 181, 349
Hpy188III	TCNNGA	2 cut(s)	12, 173
Hpy8I	GTNNAC	3 cut(s)	144, 181, 349
HpyAV	CCTTC	2 cut(s)	47, 196
HpyCH4III	ACNGT	1 cut(s)	255
HpyCH4IV	ACGT	1 cut(s)	146
HpyCH4V	TGCA	1 cut(s)	4
HpyF3I	CTNAG	3 cut(s)	243, 248, 462
HpySE526I	ACGT	1 cut(s)	146
Hsp92II	CATG	1 cut(s)	29
KspAI	GTTAAC	2 cut(s)	181, 349
Kzo9I	GATC	3 cut(s)	358, 380, 422
LguI	GCTCTTC	1 cut(s)	68
LmnI	GCTCC	2 cut(s)	274, 452
LpnPI	CCDG	9 cut(s)	57, 84, 114, 144, 186, 197, 282, 443, 459
Lsp1109I	GCAGC	2 cut(s)	442, 445
MaeII	ACGT	1 cut(s)	146
MaeIII	GTNAC	1 cut(s)	311
MalI	GATC	3 cut(s)	360, 382, 424
MboI	GATC	3 cut(s)	358, 380, 422
MboII	GAAGA	3 cut(s)	55, 202, 419
MluCI	AATT	1 cut(s)	45
MmeI	TCCRAC	1 cut(s)	430
MnlI	CCTC	3 cut(s)	155, 256, 293
MseI	TTAA	3 cut(s)	30, 180, 348
MslI	CAYNNNNRTG	1 cut(s)	218
MspI	CCGG	1 cut(s)	430
MspR9I	CCNGG	2 cut(s)	72, 430
Mva1269I	GAATGC	1 cut(s)	298
MvaI	CCWGG	1 cut(s)	72
NciI	CCSGG	1 cut(s)	430
NdeII	GATC	3 cut(s)	358, 380, 422
NlaIII	CATG	1 cut(s)	29
NlaIV	GGNNCC	1 cut(s)	171
NmuCI	GTSAC	1 cut(s)	311
NspI	RCATGY	1 cut(s)	29
OliI	CACNNNNGTG	1 cut(s)	218
PciI	ACATGT	1 cut(s)	25
PciSI	GCTCTTC	1 cut(s)	68
PctI	GAATGC	1 cut(s)	298
PfoI	TCCNGGA	1 cut(s)	70
PkrI	GCNGC	2 cut(s)	457, 460
Ple19I	CGATCG	1 cut(s)	361
PscI	ACATGT	1 cut(s)	25
PshAI	GACNNNNGTC	1 cut(s)	322
Psp6I	CCWGG	1 cut(s)	70
PspGI	CCWGG	1 cut(s)	70
PspN4I	GGNNCC	1 cut(s)	171
PvuI	CGATCG	1 cut(s)	361
RsaI	GTAC	2 cut(s)	143, 330
RsaNI	GTAC	2 cut(s)	142, 329
RseI	CAYNNNNRTG	1 cut(s)	218
SapI	GCTCTTC	1 cut(s)	68
SaqAI	TTAA	3 cut(s)	30, 180, 348
SatI	GCNGC	2 cut(s)	456, 459
Sau3AI	GATC	3 cut(s)	358, 380, 422
ScrFI	CCNGG	2 cut(s)	72, 430
SetI	ASST	6 cut(s)	63, 149, 249, 267, 354, 457
SmiMI	CAYNNNNRTG	1 cut(s)	218
SmlI	CTYRAG	3 cut(s)	79, 366, 434
SmoI	CTYRAG	3 cut(s)	79, 366, 434
Sse9I	AATT	1 cut(s)	45
SsiI	CCGC	1 cut(s)	400
StyD4I	CCNGG	2 cut(s)	70, 428
StyI	CCWWGG	1 cut(s)	237
TaaI	ACNGT	1 cut(s)	255
TaiI	ACGT	1 cut(s)	149
TaqI	TCGA	2 cut(s)	333, 361
TasI	AATT	1 cut(s)	45
TatI	WGTACW	2 cut(s)	141, 328
Tru1I	TTAA	3 cut(s)	30, 180, 348
Tru9I	TTAA	3 cut(s)	30, 180, 348
TscAI	CASTG	2 cut(s)	163, 316
TseFI	GTSAC	1 cut(s)	311
TseI	GCWGC	2 cut(s)	455, 458
Tsp45I	GTSAC	1 cut(s)	311
TspGWI	ACGGA	1 cut(s)	330
TspRI	CASTG	2 cut(s)	163, 316
XceI	RCATGY	1 cut(s)	29

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.