Rroxscaffold_4G00287750

Sedoheptulose-1,7-bisphosphatase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
8716723 .. 8719035
2313 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00287750.1

Sequence Viewer

Length: 1155 bp
ATGGAGGCCACTATAGCCTGCTGTTCAGCTAGGGCATTCCTGCCCGGTGTTTCGACTCAGCATTCGACTGCACTGGCTGCTCCACCGGCCATCTCTCCATCTTTCAGCTCTAAGAGCCTAAAATCAACGTCCCTGTTTGGGGAATCACTAAGACAAGCACCAAGATCATCATTTAAGGTTTCAAAGGCAAACCAGTCTTCTTCCGTCACCAAATGTGCAATTGGTGATAGCTTGGAGGAGTTCCTTACAAAGGCAACCCCGGATAAGGGGCTGATCAGGTTGATGATGTGTATGGGAGAAGCACTGAGGACTATTTCCTTCAAGGTGAGAACAGCTTCATGTGGAGGAACAGCCTGTGTCAACTCTTTCGGCGATGAGCAGCTTGCGGTGGATATGCTTGCCGACAAGCTTTTGTTTGAGGCCTTAACTTACTCACATGTCTGCAAATACGCTTGCTCTGAAGAGGTTCCAGAACTCCAAGACATGGGAGGCCCAGTTGAAGGTGGATTCAGTGTTGCTTTTGATCCACTGGACGGCTCCAGCATCGTTGACACCAACTTCACTGTGGGCACCATCTTTGGGGTGTGGCCAGGAGATAAGTTAACTGGTATAACAGGGGCGGACCAAGTTGCTGCAGCCATGGGGATTTATGGTCCTAGAACTACTTATGTCCTTGCCATTAAAGGCTTCCCCGGAACACATGAATTCCTTCTTCTCGATGAAGGAAAGTGGCAACATGTCAAAGAGACAACAGAGATATCTGAAGGGAAAATGTTCTCTCCTGGAAATTTGAGAGCCACGTTTGACAATCCAGACTATGACAAGAAATACACATTGAGATACACTGGAGGAATGGTGCCAGATGTCAACCAGATAATTGTAAAGGAGAAGGGGGTTTTCACCAATGTGACATCTCCAAGTACCAAAGCCAAGCTCAGGCTGTTGTTTGAGGTAGCTCCATTGGGGTTATTGGTTGAGAATGCTGGAGGTTTTAGTAGTGATGGTCATCAGTCTGTGCTAGACAAGGTCATCGTTAATCTAGACGACAGAACTCAAGTTGCTTATGGATCCAAGAATGAGATTATCCGGTTTGAAGAAACTCTATATGGATCATCAAGGCTCAAGGGAGGAGTACCTGTTGGAGCTGCTGCTTAA

Protein Analysis

384

Amino Acids

40.97

Weight (kDa)

5.68

Isoelectric Point (pI)

32.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBPase PF00316 68 - 249 9.5e-58 Fructose-1-6-bisphosphatase, N-terminal domain
FBPase_C PF18913 265 - 367 9.2e-32 Fructose-1-6-bisphosphatase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 569, 856
AccB7I CCANNNNNTGG 1 cut(s) 484
AciI CCGC 2 cut(s) 386, 620
AclWI GGATC 4 cut(s) 518, 1062, 1075, 1117
AcoI YGGCCR 2 cut(s) 87, 587
AcsI RAATTY 2 cut(s) 704, 787
AcuI CTGAAG 2 cut(s) 480, 783
AfaI GTAC 2 cut(s) 922, 1134
AflIII ACRYGT 2 cut(s) 436, 736
AgsI TTSAA 4 cut(s) 183, 322, 500, 1094
AjnI CCWGG 2 cut(s) 589, 781
AleI CACNNNNGTG 1 cut(s) 905
AluBI AGCT 9 cut(s) 29, 108, 231, 335, 382, 409, 934, 956, 1145
AluI AGCT 9 cut(s) 29, 108, 231, 335, 382, 409, 934, 956, 1145
Alw26I GTCTC 1 cut(s) 740
AlwI GGATC 4 cut(s) 518, 1062, 1075, 1117
AoxI GGCC 5 cut(s) 6, 87, 420, 490, 587
ApeKI GCWGC 6 cut(s) 77, 379, 632, 635, 1145, 1148
ApoI RAATTY 2 cut(s) 704, 787
ArsI GACNNNNNNTTYG 2 cut(s) 46, 78
Asp700I GAANNNNTTC 4 cut(s) 334, 465, 708, 773
AspS9I GGNCC 3 cut(s) 491, 622, 653
AsuC2I CCSGG 3 cut(s) 45, 260, 693
AsuHPI GGTGA 4 cut(s) 199, 236, 337, 892
AvaII GGWCC 2 cut(s) 622, 653
BaeGI GKGCMC 1 cut(s) 572
BalI TGGCCA 1 cut(s) 589
BamHI GGATCC 1 cut(s) 1067
BanI GGYRCC 2 cut(s) 569, 856
BbsI GAAGAC 1 cut(s) 189
BbvI GCAGC 6 cut(s) 64, 391, 619, 647, 1132, 1135
BccI CCATC 4 cut(s) 98, 106, 581, 995
BceAI ACGGC 1 cut(s) 550
BciT130I CCWGG 2 cut(s) 591, 783
BclI TGATCA 1 cut(s) 273
BcnI CCSGG 3 cut(s) 45, 260, 693
BcoDI GTCTC 1 cut(s) 740
BfaI CTAG 4 cut(s) 30, 657, 1019, 1040
BfmI CTRYAG 2 cut(s) 12, 633
BisI GCNGC 6 cut(s) 78, 380, 633, 636, 1146, 1149
BlsI GCNGC 6 cut(s) 79, 381, 634, 637, 1147, 1150
Bme1390I CCNGG 5 cut(s) 45, 260, 591, 693, 783
Bme18I GGWCC 2 cut(s) 622, 653
BmgT120I GGNCC 3 cut(s) 491, 622, 653
BmiI GGNNCC 5 cut(s) 468, 538, 571, 858, 1069
BmrFI CCNGG 5 cut(s) 45, 260, 591, 693, 783
BmrI ACTGGG 1 cut(s) 488
BmsI GCATC 1 cut(s) 552
BmuI ACTGGG 1 cut(s) 488
BpiI GAAGAC 1 cut(s) 189
BpmI CTGGAG 3 cut(s) 523, 867, 1005
Bpu10I CCTNAGC 1 cut(s) 935
BpuEI CTTGAG 2 cut(s) 1038, 1106
BpuMI CCSGG 3 cut(s) 45, 260, 693
BsaBI GATNNNNATC 1 cut(s) 1005
BsaJI CCNNGG 3 cut(s) 258, 639, 691
BsaWI WCCGGW 1 cut(s) 1086
BsaXI ACNNNNNCTCC 6 cut(s) 480, 510, 840, 870, 1122, 1152
Bse118I RCCGGY 1 cut(s) 85
Bse1I ACTGG 6 cut(s) 78, 193, 494, 534, 610, 850
Bse8I GATNNNNATC 1 cut(s) 1005
BseBI CCWGG 2 cut(s) 591, 783
BseDI CCNNGG 3 cut(s) 258, 639, 691
BseJI GATNNNNATC 1 cut(s) 1005
BseMII CTCAG 3 cut(s) 71, 296, 949
BseNI ACTGG 6 cut(s) 78, 193, 494, 534, 610, 850
BseRI GAGGAG 2 cut(s) 251, 1143
BseSI GKGCMC 1 cut(s) 572
BseXI GCAGC 6 cut(s) 64, 391, 619, 647, 1132, 1135
BsgI GTGCAG 1 cut(s) 54
BshFI GGCC 5 cut(s) 8, 89, 422, 492, 589
BshNI GGYRCC 2 cut(s) 569, 856
BsiSI CCGG 5 cut(s) 45, 86, 260, 693, 1087
BslFI GGGAC 1 cut(s) 115
BsmAI GTCTC 1 cut(s) 740
BsmFI GGGAC 1 cut(s) 115
BsmI GAATGC 3 cut(s) 35, 61, 985
BsnI GGCC 5 cut(s) 8, 89, 422, 492, 589
Bsp1286I GDGCHC 1 cut(s) 572
Bsp143I GATC 5 cut(s) 164, 273, 523, 1067, 1109
Bsp19I CCATGG 1 cut(s) 639
BspACI CCGC 2 cut(s) 386, 620
BspANI GGCC 5 cut(s) 8, 89, 422, 492, 589
BspCNI CTCAG 3 cut(s) 70, 297, 948
BspLI GGNNCC 5 cut(s) 468, 538, 571, 858, 1069
BspMAI CTGCAG 1 cut(s) 637
BspPI GGATC 4 cut(s) 518, 1062, 1075, 1117
BspT107I GGYRCC 2 cut(s) 569, 856
BsrFI RCCGGY 1 cut(s) 85
BsrI ACTGG 6 cut(s) 78, 193, 494, 534, 610, 850
BssAI RCCGGY 1 cut(s) 85
BssECI CCNNGG 3 cut(s) 258, 639, 691
BssMI GATC 5 cut(s) 164, 273, 523, 1067, 1109
BssT1I CCWWGG 1 cut(s) 639
Bst2UI CCWGG 2 cut(s) 591, 783
Bst4CI ACNGT 1 cut(s) 565
Bst6I CTCTTC 1 cut(s) 456
BstAPI GCANNNNNTGC 1 cut(s) 77
BstC8I GCNNGC 4 cut(s) 19, 384, 399, 454
BstDEI CTNAG 5 cut(s) 57, 111, 149, 305, 935
BstDSI CCRYGG 1 cut(s) 639
BstENI CCTNNNNNAGG 1 cut(s) 248
BstKTI GATC 5 cut(s) 167, 276, 526, 1070, 1112
BstMAI GTCTC 1 cut(s) 740
BstMBI GATC 5 cut(s) 164, 273, 523, 1067, 1109
BstMWI GCNNNNNNNGC 4 cut(s) 14, 77, 86, 114
BstNI CCWGG 2 cut(s) 591, 783
BstNSI RCATGY 2 cut(s) 440, 740
BstSCI CCNGG 5 cut(s) 43, 258, 589, 691, 781
BstSFI CTRYAG 2 cut(s) 12, 633
BstSLI GKGCMC 1 cut(s) 572
BstV1I GCAGC 6 cut(s) 64, 391, 619, 647, 1132, 1135
BstV2I GAAGAC 1 cut(s) 189
BstX2I RGATCY 1 cut(s) 1067
BstYI RGATCY 1 cut(s) 1067
BsuRI GGCC 5 cut(s) 8, 89, 422, 492, 589
BtgI CCRYGG 1 cut(s) 639
BtgZI GCGATG 1 cut(s) 387
BtsIMutI CAGTG 6 cut(s) 71, 302, 517, 527, 561, 843
Cac8I GCNNGC 4 cut(s) 19, 384, 399, 454
Cfr10I RCCGGY 1 cut(s) 85
Cfr13I GGNCC 3 cut(s) 491, 622, 653
Csp6I GTAC 2 cut(s) 921, 1133
CviAII CATG 6 cut(s) 339, 437, 484, 640, 701, 737
CviQI GTAC 2 cut(s) 921, 1133
DdeI CTNAG 5 cut(s) 57, 111, 149, 305, 935
DpnI GATC 5 cut(s) 166, 275, 525, 1069, 1111
DpnII GATC 5 cut(s) 164, 273, 523, 1067, 1109
EaeI YGGCCR 2 cut(s) 87, 587
Eam1104I CTCTTC 1 cut(s) 456
EarI CTCTTC 1 cut(s) 456
EciI GGCGGA 1 cut(s) 635
Eco130I CCWWGG 1 cut(s) 639
Eco147I AGGCCT 1 cut(s) 422
Eco32I GATATC 1 cut(s) 759
Eco47I GGWCC 2 cut(s) 622, 653
Eco57I CTGAAG 2 cut(s) 480, 783
EcoNI CCTNNNNNAGG 1 cut(s) 248
EcoRI GAATTC 1 cut(s) 704
EcoRII CCWGG 2 cut(s) 589, 781
EcoRV GATATC 1 cut(s) 759
EcoT14I CCWWGG 1 cut(s) 639
ErhI CCWWGG 1 cut(s) 639
FaeI CATG 6 cut(s) 342, 440, 487, 643, 704, 740
FaqI GGGAC 1 cut(s) 115
FatI CATG 6 cut(s) 338, 436, 483, 639, 700, 736
FbaI TGATCA 1 cut(s) 273
Fnu4HI GCNGC 6 cut(s) 78, 380, 633, 636, 1146, 1149
Fsp4HI GCNGC 6 cut(s) 78, 380, 633, 636, 1146, 1149
FspBI CTAG 4 cut(s) 30, 657, 1019, 1040
GluI GCNGC 6 cut(s) 78, 380, 633, 636, 1146, 1149
GsuI CTGGAG 3 cut(s) 523, 867, 1005
HaeIII GGCC 5 cut(s) 8, 89, 422, 492, 589
HapII CCGG 5 cut(s) 45, 86, 260, 693, 1087
Hin1II CATG 6 cut(s) 342, 440, 487, 643, 704, 740
HincII GTYRAC 4 cut(s) 361, 550, 603, 868
HindII GTYRAC 4 cut(s) 361, 550, 603, 868
HindIII AAGCTT 1 cut(s) 407
HinfI GANTC 3 cut(s) 55, 143, 507
HpaI GTTAAC 1 cut(s) 603
HpaII CCGG 5 cut(s) 45, 86, 260, 693, 1087
HphI GGTGA 4 cut(s) 199, 236, 337, 892
Hpy166II GTNNAC 4 cut(s) 361, 550, 603, 868
Hpy188I TCNGA 2 cut(s) 460, 763
Hpy188III TCNNGA 4 cut(s) 470, 716, 812, 1040
Hpy8I GTNNAC 4 cut(s) 361, 550, 603, 868
HpyAV CCTTC 6 cut(s) 328, 494, 716, 719, 758, 883
HpyCH4III ACNGT 1 cut(s) 565
HpyCH4IV ACGT 2 cut(s) 128, 800
HpyCH4V TGCA 4 cut(s) 71, 218, 444, 635
HpyF10VI GCNNNNNNNGC 4 cut(s) 14, 77, 86, 114
HpyF3I CTNAG 5 cut(s) 57, 111, 149, 305, 935
HpySE526I ACGT 2 cut(s) 128, 800
Hsp92II CATG 6 cut(s) 342, 440, 487, 643, 704, 740
Ksp22I TGATCA 1 cut(s) 273
KspAI GTTAAC 1 cut(s) 603
Kzo9I GATC 5 cut(s) 164, 273, 523, 1067, 1109
LmnI GCTCC 4 cut(s) 85, 542, 961, 1142
Lsp1109I GCAGC 6 cut(s) 64, 391, 619, 647, 1132, 1135
LweI GCATC 1 cut(s) 552
MaeI CTAG 4 cut(s) 30, 657, 1019, 1040
MaeII ACGT 2 cut(s) 128, 800
MaeIII GTNAC 2 cut(s) 205, 907
MalI GATC 5 cut(s) 166, 275, 525, 1069, 1111
MboI GATC 5 cut(s) 164, 273, 523, 1067, 1109
MboII GAAGA 5 cut(s) 189, 192, 473, 704, 1106
MfeI CAATTG 1 cut(s) 219
MflI RGATCY 1 cut(s) 1067
MhlI GDGCHC 1 cut(s) 572
MlsI TGGCCA 1 cut(s) 589
MluCI AATT 4 cut(s) 219, 704, 787, 876
MluNI TGGCCA 1 cut(s) 589
MlyI GAGTC 1 cut(s) 49
MmeI TCCRAC 1 cut(s) 1120
Mox20I TGGCCA 1 cut(s) 589
MroXI GAANNNNTTC 4 cut(s) 334, 465, 708, 773
MscI TGGCCA 1 cut(s) 589
MseI TTAA 6 cut(s) 174, 425, 602, 681, 1035, 1153
MslI CAYNNNNRTG 1 cut(s) 905
Msp20I TGGCCA 1 cut(s) 589
MspI CCGG 5 cut(s) 45, 86, 260, 693, 1087
MspR9I CCNGG 5 cut(s) 45, 260, 591, 693, 783
MunI CAATTG 1 cut(s) 219
Mva1269I GAATGC 3 cut(s) 35, 61, 985
MvaI CCWGG 2 cut(s) 591, 783
MwoI GCNNNNNNNGC 4 cut(s) 14, 77, 86, 114
NciI CCSGG 3 cut(s) 45, 260, 693
NcoI CCATGG 1 cut(s) 639
NdeII GATC 5 cut(s) 164, 273, 523, 1067, 1109
NlaIII CATG 6 cut(s) 342, 440, 487, 643, 704, 740
NlaIV GGNNCC 5 cut(s) 468, 538, 571, 858, 1069
NmuCI GTSAC 2 cut(s) 205, 907
NspI RCATGY 2 cut(s) 440, 740
OliI CACNNNNGTG 1 cut(s) 905
PceI AGGCCT 1 cut(s) 422
PciI ACATGT 2 cut(s) 436, 736
PctI GAATGC 3 cut(s) 35, 61, 985
PdmI GAANNNNTTC 4 cut(s) 334, 465, 708, 773
PfeI GAWTC 2 cut(s) 143, 507
PflFI GACNNNGTC 1 cut(s) 1025
PflMI CCANNNNNTGG 1 cut(s) 484
PfoI TCCNGGA 1 cut(s) 781
PkrI GCNGC 6 cut(s) 79, 381, 634, 637, 1147, 1150
PleI GAGTC 1 cut(s) 49
PpsI GAGTC 1 cut(s) 49
PscI ACATGT 2 cut(s) 436, 736
Psp6I CCWGG 2 cut(s) 589, 781
PspGI CCWGG 2 cut(s) 589, 781
PspN4I GGNNCC 5 cut(s) 468, 538, 571, 858, 1069
PspPI GGNCC 3 cut(s) 491, 622, 653
PstI CTGCAG 1 cut(s) 637
PsuI RGATCY 1 cut(s) 1067
PsyI GACNNNGTC 1 cut(s) 1025
RsaI GTAC 2 cut(s) 922, 1134
RsaNI GTAC 2 cut(s) 921, 1133
RseI CAYNNNNRTG 1 cut(s) 905
SaqAI TTAA 6 cut(s) 174, 425, 602, 681, 1035, 1153
SatI GCNGC 6 cut(s) 78, 380, 633, 636, 1146, 1149
Sau3AI GATC 5 cut(s) 164, 273, 523, 1067, 1109
Sau96I GGNCC 3 cut(s) 491, 622, 653
SchI GAGTC 1 cut(s) 49
ScrFI CCNGG 5 cut(s) 45, 260, 591, 693, 783
SduI GDGCHC 1 cut(s) 572
SfaNI GCATC 1 cut(s) 552
SfcI CTRYAG 2 cut(s) 12, 633
SinI GGWCC 2 cut(s) 622, 653
SmiMI CAYNNNNRTG 1 cut(s) 905
SmlI CTYRAG 2 cut(s) 1053, 1121
SmoI CTYRAG 2 cut(s) 1053, 1121
Sse9I AATT 4 cut(s) 219, 704, 787, 876
SseBI AGGCCT 1 cut(s) 422
SsiI CCGC 2 cut(s) 386, 620
SspMI CTAG 4 cut(s) 30, 657, 1019, 1040
StuI AGGCCT 1 cut(s) 422
StyD4I CCNGG 5 cut(s) 43, 258, 589, 691, 781
StyI CCWWGG 1 cut(s) 639
TaaI ACNGT 1 cut(s) 565
TaiI ACGT 2 cut(s) 131, 803
TaqI TCGA 3 cut(s) 53, 65, 717
TasI AATT 4 cut(s) 219, 704, 787, 876
TfiI GAWTC 2 cut(s) 143, 507
Tru1I TTAA 6 cut(s) 174, 425, 602, 681, 1035, 1153
Tru9I TTAA 6 cut(s) 174, 425, 602, 681, 1035, 1153
TscAI CASTG 6 cut(s) 78, 309, 517, 534, 568, 850
TseFI GTSAC 2 cut(s) 205, 907
TseI GCWGC 6 cut(s) 77, 379, 632, 635, 1145, 1148
Tsp45I GTSAC 2 cut(s) 205, 907
TspDTI ATGAA 3 cut(s) 327, 717, 735
TspGWI ACGGA 1 cut(s) 193
TspRI CASTG 6 cut(s) 78, 309, 517, 534, 568, 850
Tth111I GACNNNGTC 1 cut(s) 1025
Van91I CCANNNNNTGG 1 cut(s) 484
VpaK11BI GGWCC 2 cut(s) 622, 653
XagI CCTNNNNNAGG 1 cut(s) 248
XapI RAATTY 2 cut(s) 704, 787
XbaI TCTAGA 1 cut(s) 1039
XceI RCATGY 2 cut(s) 440, 740
XcmI CCANNNNNNNNNTGG 1 cut(s) 562
XmnI GAANNNNTTC 4 cut(s) 334, 465, 708, 773
XspI CTAG 4 cut(s) 30, 657, 1019, 1040
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.