MD07G1213200.v1.1

Sedoheptulose-1,7-bisphosphatase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
29092043 .. 29097920
5878 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1213200.v1.1.491

Sequence Viewer

Length: 1125 bp
ATGGAGGCCACCATAGCTTGCTGCTCATCCGCCAGGGCGTTCCTGCCGGCTGCCGGCGTTGTGAGTCACCAGCATTCCACTTCACTTTTGGCTCCATCTTTTAGCTCCAAGAGCCTAAAATCAAGCTCCCTCTTCGGAGAATCACTACGACAAGTGCCGCGATCATTGCTTAAGGTTTCCAAGACAAAACAGTTTACTCATGTGACAAAATGTGCAATCGGTGATAGCCTTGTGATTTTACAGGAGGAGTTTCTTGCAAAGGCAACCCCGGATAAGGGACTGATCCGGTTGCTGATAAGCATGGGAGAAGCACTGAGGACTATTTCCTTCAAGGTCAGAACAGCTTCTTGTGGAGGAACGGCCTGTGTTAATTCTTTCGGGGATGAGCAGCTTGCCGTGGATATGCTTGCTGACAAGCTTTTGTTCGAGGCCTTAAGTTACTCGCATGTCTGCAAATACGCTTGCTCTGAAGAGGTTCCGGAACTCCAAGACCTGGGAGGCCCAATTGAAGGTGGATTTAGTGTTGCTTTTGATCCGCTTGATGGCTCCAGCATTGTTGACACAAACTTTACTGTAGGCACCATCTTTGGTGTGTGGCCAGGAGATAAGTTAACTGGGGTAACAGGAAGAGGCCAAGTTGCTGCAGCCATGGGAATTTACGGTCCTAGAACTACATATTGGCAGCATGACAAAGAGACAACAGAGATTGGTGAAGGAAAGATGTTTTCGCCTGGAAATTTGAGAGCCACGTTTGACAATCCAGATTATGACAAGTTGATCAACTACTACGTAAAAGAGAAGTACACATTGAGATACACCGGAGGAATGGTTCCGGATGTCAATCAGATAATTGTGAAAGAGAAAGGGGTTTTCACAAACGTTATATCTCCAACCACGAAAGCCAAGCTGAGGCTGTTATTTGAGGTAGCTCCATTAGGGTTGTTGATTGAGAATGCTGGAGGCTTTAGTAGTGATGGTCATCAGTCTGTGCTAGACAAGGTGGTCGTTAACCTCGACGATAGAACTCAGGTTGCTTATGGATCGAAAAATGAGATTATTCGGTTCGAAGAAACTCTATACGGATCATCCAGGCTCAAGGGGGTGCCTGTTGGAGCTGCAGCTTAA

Protein Analysis

375

Amino Acids

40.28

Weight (kDa)

6.34

Isoelectric Point (pI)

33.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBPase PF00316 87 - 226 6.7e-47 Fructose-1-6-bisphosphatase, N-terminal domain
FBPase_C PF18913 238 - 358 9.9e-37 Fructose-1-6-bisphosphatase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1001
AccB1I GGYRCC 2 cut(s) 578, 1102
AccB7I CCANNNNNTGG 1 cut(s) 493
AccII CGCG 1 cut(s) 160
AccIII TCCGGA 2 cut(s) 478, 832
AciI CCGC 3 cut(s) 30, 158, 536
AclI AACGTT 1 cut(s) 879
AclWI GGATC 4 cut(s) 277, 527, 1048, 1090
AcoI YGGCCR 1 cut(s) 596
AcsI RAATTY 2 cut(s) 654, 736
AcuI CTGAAG 1 cut(s) 489
AfaI GTAC 1 cut(s) 803
AfiI CCNNNNNNNGG 7 cut(s) 53, 274, 275, 493, 509, 542, 909
AflII CTTAAG 2 cut(s) 170, 433
AgsI TTSAA 2 cut(s) 331, 509
AjnI CCWGG 5 cut(s) 32, 492, 598, 730, 1088
AjuI GAANNNNNNNTTGG 2 cut(s) 661, 693
AloI GAACNNNNNNTCC 2 cut(s) 813, 845
Alw26I GTCTC 1 cut(s) 689
AlwI GGATC 4 cut(s) 277, 527, 1048, 1090
Aor13HI TCCGGA 2 cut(s) 478, 832
AoxI GGCC 6 cut(s) 6, 360, 429, 499, 596, 631
ApeKI GCWGC 8 cut(s) 21, 50, 388, 641, 644, 682, 1115, 1118
ApoI RAATTY 2 cut(s) 654, 736
Asp700I GAANNNNTTC 2 cut(s) 343, 474
AspS9I GGNCC 2 cut(s) 500, 662
AsuC2I CCSGG 1 cut(s) 269
AsuHPI GGTGA 3 cut(s) 59, 233, 722
AsuII TTCGAA 1 cut(s) 1065
AvaII GGWCC 1 cut(s) 662
BalI TGGCCA 1 cut(s) 598
BanI GGYRCC 2 cut(s) 578, 1102
BbvCI CCTCAGC 1 cut(s) 908
BbvI GCAGC 7 cut(s) 8, 37, 400, 628, 656, 694, 1102
BccI CCATC 4 cut(s) 103, 536, 590, 968
BceAI ACGGC 2 cut(s) 375, 380
BciT130I CCWGG 5 cut(s) 34, 494, 600, 732, 1090
BclI TGATCA 1 cut(s) 777
BcnI CCSGG 1 cut(s) 269
BcoDI GTCTC 1 cut(s) 689
BfaI CTAG 2 cut(s) 666, 992
BfmI CTRYAG 3 cut(s) 573, 642, 1116
BfrI CTTAAG 2 cut(s) 170, 433
BisI GCNGC 9 cut(s) 22, 51, 158, 389, 642, 645, 683, 1116, 1119
BlsI GCNGC 9 cut(s) 23, 52, 159, 390, 643, 646, 684, 1117, 1120
Bme1390I CCNGG 6 cut(s) 34, 269, 494, 600, 732, 1090
Bme18I GGWCC 1 cut(s) 662
BmgT120I GGNCC 2 cut(s) 500, 662
BmiI GGNNCC 6 cut(s) 93, 477, 547, 580, 831, 1104
BmrFI CCNGG 6 cut(s) 34, 269, 494, 600, 732, 1090
BmrI ACTGGG 1 cut(s) 624
BmuI ACTGGG 1 cut(s) 624
BpmI CTGGAG 2 cut(s) 532, 978
Bpu10I CCTNAGC 1 cut(s) 908
Bpu14I TTCGAA 1 cut(s) 1065
BpuEI CTTGAG 1 cut(s) 1079
BpuMI CCSGG 1 cut(s) 269
BsaAI YACGTR 1 cut(s) 790
BsaBI GATNNNNATC 2 cut(s) 840, 978
BsaJI CCNNGG 5 cut(s) 33, 267, 396, 493, 648
BsaWI WCCGGW 4 cut(s) 285, 478, 818, 832
BsaXI ACNNNNNCTCC 2 cut(s) 813, 843
Bsc4I CCNNNNNNNGG 7 cut(s) 53, 274, 275, 493, 509, 542, 909
Bse118I RCCGGY 2 cut(s) 46, 53
Bse1I ACTGG 1 cut(s) 619
Bse3DI GCAATG 1 cut(s) 164
Bse8I GATNNNNATC 2 cut(s) 840, 978
BseAI TCCGGA 2 cut(s) 478, 832
BseBI CCWGG 5 cut(s) 34, 494, 600, 732, 1090
BseDI CCNNGG 5 cut(s) 33, 267, 396, 493, 648
BseGI GGATG 4 cut(s) 26, 388, 841, 1085
BseJI GATNNNNATC 2 cut(s) 840, 978
BseLI CCNNNNNNNGG 7 cut(s) 53, 274, 275, 493, 509, 542, 909
BseMI GCAATG 1 cut(s) 164
BseMII CTCAG 3 cut(s) 305, 899, 1040
BseNI ACTGG 1 cut(s) 619
BseRI GAGGAG 1 cut(s) 260
BseXI GCAGC 7 cut(s) 8, 37, 400, 628, 656, 694, 1102
Bsh1236I CGCG 1 cut(s) 160
BshFI GGCC 6 cut(s) 8, 362, 431, 501, 598, 633
BshNI GGYRCC 2 cut(s) 578, 1102
BsiSI CCGG 7 cut(s) 47, 54, 269, 286, 479, 819, 833
BslFI GGGAC 1 cut(s) 291
BslI CCNNNNNNNGG 7 cut(s) 53, 274, 275, 493, 509, 542, 909
BsmAI GTCTC 1 cut(s) 689
BsmFI GGGAC 1 cut(s) 291
BsmI GAATGC 2 cut(s) 73, 958
BsnI GGCC 6 cut(s) 8, 362, 431, 501, 598, 633
Bsp119I TTCGAA 1 cut(s) 1065
Bsp13I TCCGGA 2 cut(s) 478, 832
Bsp143I GATC 6 cut(s) 161, 282, 532, 777, 1040, 1082
Bsp19I CCATGG 1 cut(s) 648
BspACI CCGC 3 cut(s) 30, 158, 536
BspANI GGCC 6 cut(s) 8, 362, 431, 501, 598, 633
BspCNI CTCAG 3 cut(s) 306, 900, 1039
BspEI TCCGGA 2 cut(s) 478, 832
BspFNI CGCG 1 cut(s) 160
BspLI GGNNCC 6 cut(s) 93, 477, 547, 580, 831, 1104
BspMAI CTGCAG 2 cut(s) 646, 1120
BspPI GGATC 4 cut(s) 277, 527, 1048, 1090
BspT104I TTCGAA 1 cut(s) 1065
BspT107I GGYRCC 2 cut(s) 578, 1102
BspTI CTTAAG 2 cut(s) 170, 433
BsrDI GCAATG 1 cut(s) 164
BsrFI RCCGGY 2 cut(s) 46, 53
BsrI ACTGG 1 cut(s) 619
BssAI RCCGGY 2 cut(s) 46, 53
BssECI CCNNGG 5 cut(s) 33, 267, 396, 493, 648
BssMI GATC 6 cut(s) 161, 282, 532, 777, 1040, 1082
BssT1I CCWWGG 1 cut(s) 648
Bst2UI CCWGG 5 cut(s) 34, 494, 600, 732, 1090
Bst4CI ACNGT 3 cut(s) 192, 574, 662
Bst6I CTCTTC 3 cut(s) 137, 465, 622
BstAFI CTTAAG 2 cut(s) 170, 433
BstBAI YACGTR 1 cut(s) 790
BstBI TTCGAA 1 cut(s) 1065
BstC8I GCNNGC 6 cut(s) 19, 48, 55, 393, 408, 463
BstDEI CTNAG 3 cut(s) 314, 908, 1026
BstDSI CCRYGG 2 cut(s) 396, 648
BstF5I GGATG 4 cut(s) 26, 388, 841, 1085
BstFNI CGCG 1 cut(s) 160
BstKTI GATC 6 cut(s) 164, 285, 535, 780, 1043, 1085
BstMAI GTCTC 1 cut(s) 689
BstMBI GATC 6 cut(s) 161, 282, 532, 777, 1040, 1082
BstMWI GCNNNNNNNGC 3 cut(s) 14, 111, 166
BstNI CCWGG 5 cut(s) 34, 494, 600, 732, 1090
BstNSI RCATGY 1 cut(s) 449
BstSCI CCNGG 6 cut(s) 32, 267, 492, 598, 730, 1088
BstSFI CTRYAG 3 cut(s) 573, 642, 1116
BstSNI TACGTA 1 cut(s) 790
BstUI CGCG 1 cut(s) 160
BstV1I GCAGC 7 cut(s) 8, 37, 400, 628, 656, 694, 1102
BsuRI GGCC 6 cut(s) 8, 362, 431, 501, 598, 633
BtgI CCRYGG 2 cut(s) 396, 648
BtsCI GGATG 4 cut(s) 26, 388, 841, 1085
BtsIMutI CAGTG 1 cut(s) 311
Cac8I GCNNGC 6 cut(s) 19, 48, 55, 393, 408, 463
Cfr10I RCCGGY 2 cut(s) 46, 53
Cfr13I GGNCC 2 cut(s) 500, 662
Csp6I GTAC 1 cut(s) 802
CviAII CATG 5 cut(s) 200, 301, 446, 649, 686
CviQI GTAC 1 cut(s) 802
DdeI CTNAG 3 cut(s) 314, 908, 1026
DpnI GATC 6 cut(s) 163, 284, 534, 779, 1042, 1084
DpnII GATC 6 cut(s) 161, 282, 532, 777, 1040, 1082
DrdI GACNNNNNNGTC 1 cut(s) 1001
DseDI GACNNNNNNGTC 1 cut(s) 1001
EaeI YGGCCR 1 cut(s) 596
Eam1104I CTCTTC 3 cut(s) 137, 465, 622
EarI CTCTTC 3 cut(s) 137, 465, 622
EciI GGCGGA 1 cut(s) 19
Eco105I TACGTA 1 cut(s) 790
Eco130I CCWWGG 1 cut(s) 648
Eco147I AGGCCT 1 cut(s) 431
Eco47I GGWCC 1 cut(s) 662
Eco57I CTGAAG 1 cut(s) 489
EcoRII CCWGG 5 cut(s) 32, 492, 598, 730, 1088
EcoT14I CCWWGG 1 cut(s) 648
ErhI CCWWGG 1 cut(s) 648
FaeI CATG 5 cut(s) 203, 304, 449, 652, 689
FaqI GGGAC 1 cut(s) 291
FatI CATG 5 cut(s) 199, 300, 445, 648, 685
FbaI TGATCA 1 cut(s) 777
Fnu4HI GCNGC 9 cut(s) 22, 51, 158, 389, 642, 645, 683, 1116, 1119
FokI GGATG 4 cut(s) 13, 395, 848, 1072
Fsp4HI GCNGC 9 cut(s) 22, 51, 158, 389, 642, 645, 683, 1116, 1119
FspBI CTAG 2 cut(s) 666, 992
GluI GCNGC 9 cut(s) 22, 51, 158, 389, 642, 645, 683, 1116, 1119
GsuI CTGGAG 2 cut(s) 532, 978
HaeIII GGCC 6 cut(s) 8, 362, 431, 501, 598, 633
HapII CCGG 7 cut(s) 47, 54, 269, 286, 479, 819, 833
Hin1II CATG 5 cut(s) 203, 304, 449, 652, 689
HincII GTYRAC 3 cut(s) 559, 612, 1009
HindII GTYRAC 3 cut(s) 559, 612, 1009
HindIII AAGCTT 1 cut(s) 416
HinfI GANTC 2 cut(s) 64, 140
HpaI GTTAAC 2 cut(s) 612, 1009
HpaII CCGG 7 cut(s) 47, 54, 269, 286, 479, 819, 833
HphI GGTGA 3 cut(s) 59, 233, 722
Hpy166II GTNNAC 5 cut(s) 195, 559, 612, 804, 1009
Hpy188I TCNGA 4 cut(s) 137, 338, 469, 846
Hpy188III TCNNGA 3 cut(s) 479, 761, 833
Hpy8I GTNNAC 5 cut(s) 195, 559, 612, 804, 1009
Hpy99I CGWCG 1 cut(s) 1019
HpyAV CCTTC 3 cut(s) 337, 503, 707
HpyCH4III ACNGT 3 cut(s) 192, 574, 662
HpyCH4IV ACGT 3 cut(s) 749, 789, 879
HpyCH4V TGCA 5 cut(s) 215, 257, 453, 644, 1118
HpyF10VI GCNNNNNNNGC 3 cut(s) 14, 111, 166
HpyF3I CTNAG 3 cut(s) 314, 908, 1026
HpySE526I ACGT 3 cut(s) 749, 789, 879
Hsp92II CATG 5 cut(s) 203, 304, 449, 652, 689
Kpn2I TCCGGA 2 cut(s) 478, 832
KroI GCCGGC 2 cut(s) 46, 53
KroNI GCCGGC 2 cut(s) 48, 55
Ksp22I TGATCA 1 cut(s) 777
KspAI GTTAAC 2 cut(s) 612, 1009
Kzo9I GATC 6 cut(s) 161, 282, 532, 777, 1040, 1082
LmnI GCTCC 6 cut(s) 97, 110, 131, 551, 934, 1112
Lsp1109I GCAGC 7 cut(s) 8, 37, 400, 628, 656, 694, 1102
MaeI CTAG 2 cut(s) 666, 992
MaeII ACGT 3 cut(s) 749, 789, 879
MaeIII GTNAC 4 cut(s) 65, 202, 437, 619
MalI GATC 6 cut(s) 163, 284, 534, 779, 1042, 1084
MboI GATC 6 cut(s) 161, 282, 532, 777, 1040, 1082
MboII GAAGA 4 cut(s) 124, 482, 639, 1079
MfeI CAATTG 1 cut(s) 504
MlsI TGGCCA 1 cut(s) 598
MluCI AATT 5 cut(s) 370, 504, 654, 736, 849
MluNI TGGCCA 1 cut(s) 598
MlyI GAGTC 1 cut(s) 73
MmeI TCCRAC 2 cut(s) 914, 1090
Mox20I TGGCCA 1 cut(s) 598
MroI TCCGGA 2 cut(s) 478, 832
MroNI GCCGGC 2 cut(s) 46, 53
MroXI GAANNNNTTC 2 cut(s) 343, 474
MscI TGGCCA 1 cut(s) 598
MseI TTAA 6 cut(s) 171, 369, 434, 611, 1008, 1123
Msp20I TGGCCA 1 cut(s) 598
MspCI CTTAAG 2 cut(s) 170, 433
MspI CCGG 7 cut(s) 47, 54, 269, 286, 479, 819, 833
MspR9I CCNGG 6 cut(s) 34, 269, 494, 600, 732, 1090
MunI CAATTG 1 cut(s) 504
Mva1269I GAATGC 2 cut(s) 73, 958
MvaI CCWGG 5 cut(s) 34, 494, 600, 732, 1090
MvnI CGCG 1 cut(s) 160
MwoI GCNNNNNNNGC 3 cut(s) 14, 111, 166
NaeI GCCGGC 2 cut(s) 48, 55
NciI CCSGG 1 cut(s) 269
NcoI CCATGG 1 cut(s) 648
NdeII GATC 6 cut(s) 161, 282, 532, 777, 1040, 1082
NgoMIV GCCGGC 2 cut(s) 46, 53
NlaIII CATG 5 cut(s) 203, 304, 449, 652, 689
NlaIV GGNNCC 6 cut(s) 93, 477, 547, 580, 831, 1104
NmuCI GTSAC 2 cut(s) 65, 202
NspI RCATGY 1 cut(s) 449
NspV TTCGAA 1 cut(s) 1065
PceI AGGCCT 1 cut(s) 431
PcsI WCGNNNNNNNCGW 1 cut(s) 1011
PctI GAATGC 2 cut(s) 73, 958
PdiI GCCGGC 2 cut(s) 48, 55
PdmI GAANNNNTTC 2 cut(s) 343, 474
PfeI GAWTC 1 cut(s) 140
PflMI CCANNNNNTGG 1 cut(s) 493
PkrI GCNGC 9 cut(s) 23, 52, 159, 390, 643, 646, 684, 1117, 1120
PleI GAGTC 1 cut(s) 72
PpsI GAGTC 1 cut(s) 72
Ppu21I YACGTR 1 cut(s) 790
Psp1406I AACGTT 1 cut(s) 879
Psp6I CCWGG 5 cut(s) 32, 492, 598, 730, 1088
PspGI CCWGG 5 cut(s) 32, 492, 598, 730, 1088
PspN4I GGNNCC 6 cut(s) 93, 477, 547, 580, 831, 1104
PspPI GGNCC 2 cut(s) 500, 662
PstI CTGCAG 2 cut(s) 646, 1120
RsaI GTAC 1 cut(s) 803
RsaNI GTAC 1 cut(s) 802
SaqAI TTAA 6 cut(s) 171, 369, 434, 611, 1008, 1123
SatI GCNGC 9 cut(s) 22, 51, 158, 389, 642, 645, 683, 1116, 1119
Sau3AI GATC 6 cut(s) 161, 282, 532, 777, 1040, 1082
Sau96I GGNCC 2 cut(s) 500, 662
SchI GAGTC 1 cut(s) 73
ScrFI CCNGG 6 cut(s) 34, 269, 494, 600, 732, 1090
SfcI CTRYAG 3 cut(s) 573, 642, 1116
SfuI TTCGAA 1 cut(s) 1065
SinI GGWCC 1 cut(s) 662
SmlI CTYRAG 3 cut(s) 170, 433, 1094
SmoI CTYRAG 3 cut(s) 170, 433, 1094
SnaBI TACGTA 1 cut(s) 790
Sse9I AATT 5 cut(s) 370, 504, 654, 736, 849
SseBI AGGCCT 1 cut(s) 431
SsiI CCGC 3 cut(s) 30, 158, 536
SspMI CTAG 2 cut(s) 666, 992
StuI AGGCCT 1 cut(s) 431
StyD4I CCNGG 6 cut(s) 32, 267, 492, 598, 730, 1088
StyI CCWWGG 1 cut(s) 648
TaaI ACNGT 3 cut(s) 192, 574, 662
TaiI ACGT 3 cut(s) 752, 792, 882
TaqI TCGA 4 cut(s) 426, 1014, 1043, 1065
TasI AATT 5 cut(s) 370, 504, 654, 736, 849
TatI WGTACW 1 cut(s) 801
TauI GCSGC 1 cut(s) 160
TfiI GAWTC 1 cut(s) 140
Tru1I TTAA 6 cut(s) 171, 369, 434, 611, 1008, 1123
Tru9I TTAA 6 cut(s) 171, 369, 434, 611, 1008, 1123
TscAI CASTG 1 cut(s) 318
TseFI GTSAC 2 cut(s) 65, 202
TseI GCWGC 8 cut(s) 21, 50, 388, 641, 644, 682, 1115, 1118
Tsp45I GTSAC 2 cut(s) 65, 202
TspGWI ACGGA 1 cut(s) 1095
TspRI CASTG 1 cut(s) 318
Van91I CCANNNNNTGG 1 cut(s) 493
Vha464I CTTAAG 2 cut(s) 170, 433
VpaK11BI GGWCC 1 cut(s) 662
XapI RAATTY 2 cut(s) 654, 736
XceI RCATGY 1 cut(s) 449
XcmI CCANNNNNNNNNTGG 1 cut(s) 85
XmnI GAANNNNTTC 2 cut(s) 343, 474
XspI CTAG 2 cut(s) 666, 992
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.