Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0007206

Physical Location & Seq

Genomic Coordinates Reverse (-)

18827650 .. 18833595

Gene Structure 5946 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g24380.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2427 bp

ATGAGGTTCAACTTCGACTTGGAGGAAACCAAACCGGAGCCGAGCCGGTCCGCGACGCCCAAAGACGAAGTGGAATGGGTCCCACTGCAACACCACCCCGTCTTCTCCTCCACCTCCTCCGCCGGCCCGTCCCACCAGCCCACCGACTCTCCGCCACTCCGAAACCTCTTAACCTGGGACGGAGCCTCTCGCCTTTACTTCTGGGACTCCGACGAGCTCTGCCTTCACCGGATCTCCGTTCGCCTCGGCGAGCCTGAGCCGACCTCCGTCTCCGCTGCCTCGCCCTCCAAGGTACTGAAACCAGATGTGAAGCTGAACTTTGATGTGAACAAAATCTCCATCAATAGCAACGGGACGGCGATGCTGCTTTACGGTTCCGATGGTCTCTGCATTATGTATCTTTACGGGCGTACTTCCTCCAGAGATGGCACCACAATTTGCAGGACTGTTACTGTTGGTCCAGAAATATACATGAGTGGAACGAATGTCATACGGATACTGCAAGTTTCATGGCACCCTTGCAGTGATACTCATGTGGGAATTCTTTCTTCTGATTCAGTTTTCAGATTATTTCATTTGTCTTCAGATCTTATTCAACCAGAGCAAGCGTATTATCTGCAGCCTGTGCAACCAGGTAGATCCAGGAATGCCACATCAATTTGCCCGATGGACTTTTCATTTGGTGGTGATCACTTGTGGGACTGTTTCAGTGTTTTCATTATGTTCAGCGATGGTTCAATTTACATCCTATGTCCAATTGTTCCATTTGGAAGTGTCTATAAATGGGAATCTATAGTAGATATATATAATGATGCTCAGACATTTGGCCTGAAGTCGCCCAACTCAACGGCTGTTAGTAATTCAAATCTGGCTATTTCTTGGTTGGAAGCAACATTTCCAGAAATTGCAGGGCAAACAGATGGAGCAGATCTATCTGTTATAAAAGCTCGCCCTTATGCTTTATTTGATGCATCACTCTTATTGCAGGGGCCCCTGAGGAAAGTATCTCGTGGTGAGGATGAAGCAAACTTAGCATTTCGGGGCGCGGAATGTGAAGGTCGAGCGGTCAGTTTTCTTTATAATCTAGTCAGCAAAGATTCAATTCTTGTGACCGCTTGGAGTGGTGGGCAACTGCAAATAGATGCCCTGGCTGATGAAATCCAACCGGTCTGGAATGTCGGTTGTCCTCCTCGCCTTCGTGTTGATTCCCATGACAATATTCATGGTCTTGCAATGATCTGTGAGTCAACCCCAGATAAGCTTTCAATTGTGAAGCTTGATCAACCACTTGATAGTACTCTTTGGTTGGGCCATCCTCCTCCTCTGTTGAGACTGGCCATTGTGGATCTGGCTCTGCCTAAGAAAACAGGAAGTGATTCTCTTATTATGATGTTTATTGATCCCCTAATGCTGGAAAGAATATACACCCTTCATGATGGAGGGATAGATTCAATTGTGTTGCACTATCTCCCGTTTACAAGTCAGACCAGTGGCAAGAATGAGACCATGAGAACTCCTTCTGTGCATCCTGTTTTAAGTACTTGCCAGGGAGAATTCTCTTCGCAGTCTCCACTTTCTGGTTTTGTGTCACTATCAGATTCATTTGGGTATTCATGGGTAGTGGCAGTCACTAGTTATCAAGAATGTATTGTGTTAGAGATGAAGACCTTAAACCTGTTGCTTCCCCTTCATGTTGATACGGAGAAGAAATCCATTCTTCTGGAAGAGCCAAAAGAGAAAGACACATCAGATATTATCATTAGCAAAGAACTCCTAGGTGGACCTAAGGTGGTTCTTGTTCCTCAGACATCACCAAATTTGCGTTCTGTTTCTGCCGATTCAATTGAAGGTCGATCAATGCTTCATGAATACTTCAAGCTTTTCCATGAAAATTATGTGGAATATGCACACAAGGTTTACTTTGAACTCAAGCATCACGGGCCACACTTGAAGAGGATAATCGACGACCAACATGGTCGTTTAGTTGGGGCAAAGCAGAGGCTTTTGCAATTTGAGGAAAAGTACTCGGATTTGGAAGACCGCATTACTAACGCAGTGCAGATGCAGAATCATCTGGAAGAGCGCCTAAAACGCTTGCGGAACTTACCGGGGGTTCATAAGAAACCACTTTCCACAGCTGAGCGGGACTTCAAATCTCAGCTTGACCAGTTTTCCGGAGTTGAGTTGGACGCATTACGTTCAACTGTTAATGCATTAAGTGCAAGGATGAGAAGACACACGCAAACACCCAAGGACAATCTATCAAACAAAAAGAAGCTGGTATCTAGGAGGAAAGATCCTGTGCAAGAGTCTCAAATCTCCCAGCTGAAATCGTGCCTTGAGAAACTATCACTGGTCAATAGTGAGAATACAAAAAAGGTTAAGCTTGTTGAATCTGCACTGAGAAGTGAGGAAAGAAGTATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000054 GO:0000055 GO:0000056 GO:0002376 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0006952 GO:0006955 GO:0008104 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009627 GO:0009814 GO:0010467 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0017038 GO:0022613 GO:0031503 GO:0031967 GO:0031975 GO:0032991 GO:0033036 GO:0033365 GO:0033750 GO:0034504 GO:0034613 GO:0042254 GO:0042886 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045087 GO:0045184 GO:0046907 GO:0050657 GO:0050658 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051236 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051704 GO:0051707 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071428 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Nup88

Protein Analysis

809

Amino Acids

90.35

Weight (kDa)

6.05

Isoelectric Point (pI)

45.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nup88	PF10168	29 - 228	3.4e-17	Nuclear pore component

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0007206)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05680
fragaria_vesca	FvH4_7g24380
malus_domestica	MD01G1152200.v1.1 MD07G1220900.v1.1 MD07G1221200.v1.1
prunus_persica	Prupe.2G249200_v2.0.a1 Prupe.2G249200_v2.0.a1 Prupe.2G249200_v2.0.a1 Prupe.2G249200_v2.0.a1 Prupe.2G249200_v2.0.a1 Prupe.2G249200_v2.0.a1 Prupe.2G249200_v2.0.a1
pyrus_communis	pycom01g16990
rosa_chinensis	RchiOBHm_Chr1g0370081
rosa_laevigata	RLG00000027076
rosa_multiflora	Rmu_co8237259.1_g000001 Rmu_sc0005056.1_g000009
rosa_roxburghii	Rroxscaffold_4G00286840 Rroxscaffold_4G00287190
rosa_rugosa	Rorug01G0353700
rosa_samantha	Rh1AG362400 Rh1BG325600 Rh1CG338900 Rh1DG356100
rosa_wichuraiana	Rw1G031890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	941, 1080
AccB1I	GGYRCC	2 cut(s)	428, 513
AccB7I	CCANNNNNTGG	1 cut(s)	1577
AccBSI	CCGCTC	2 cut(s)	1064, 2143
AccII	CGCG	2 cut(s)	53, 1046
AccIII	TCCGGA	1 cut(s)	2174
AclWI	GGATC	5 cut(s)	239, 633, 1353, 1394, 2291
AcoI	YGGCCR	1 cut(s)	1335
AcsI	RAATTY	3 cut(s)	540, 1553, 1816
AcuI	CTGAAG	2 cut(s)	567, 851
AcyI	GRCGYC	1 cut(s)	56
AfaI	GTAC	5 cut(s)	294, 412, 1297, 1540, 2024
AfiI	CCNNNNNNNGG	2 cut(s)	1411, 1577
AgeI	ACCGGT	1 cut(s)	1165
AhlI	ACTAGT	1 cut(s)	1631
AjnI	CCWGG	5 cut(s)	173, 631, 641, 1146, 1545
AjuI	GAANNNNNNNTTGG	2 cut(s)	1807, 1839
AloI	GAACNNNNNNTCC	2 cut(s)	320, 352
Alw21I	GWGCWC	1 cut(s)	219
Alw26I	GTCTC	6 cut(s)	274, 389, 1324, 1496, 1572, 2316
AlwI	GGATC	5 cut(s)	239, 633, 1353, 1394, 2291
Aor13HI	TCCGGA	1 cut(s)	2174
AoxI	GGCC	6 cut(s)	124, 826, 989, 1309, 1335, 1940
ApaI	GGGCCC	1 cut(s)	993
ApeKI	GCWGC	3 cut(s)	275, 364, 619
ApoI	RAATTY	3 cut(s)	540, 1553, 1816
ArsI	GACNNNNNNTTYG	2 cut(s)	662, 694
AsiGI	ACCGGT	1 cut(s)	1165
Asp700I	GAANNNNTTC	3 cut(s)	544, 1375, 1516
AspA2I	CCTAGG	1 cut(s)	1774
AspLEI	GCGC	2 cut(s)	1046, 2085
AspS9I	GGNCC	9 cut(s)	48, 79, 125, 458, 989, 990, 1309, 1781, 1940
AsuC2I	CCSGG	1 cut(s)	2109
AsuHPI	GGTGA	4 cut(s)	218, 698, 1025, 1803
AvaII	GGWCC	4 cut(s)	48, 79, 458, 1781
AvrII	CCTAGG	1 cut(s)	1774
AxyI	CCTNAGG	2 cut(s)	995, 1785
BaeGI	GKGCMC	1 cut(s)	993
BaeI	ACNNNNGTAYC	2 cut(s)	519, 552
BalI	TGGCCA	1 cut(s)	1337
BanI	GGYRCC	2 cut(s)	428, 513
BanII	GRGCYC	2 cut(s)	219, 993
BauI	CACGAG	1 cut(s)	1008
BbsI	GAAGAC	5 cut(s)	94, 573, 1670, 2043, 2239
Bbv12I	GWGCWC	1 cut(s)	219
BbvI	GCAGC	3 cut(s)	262, 351, 631
BccI	CCATC	8 cut(s)	347, 374, 419, 661, 725, 914, 1320, 1430
BceAI	ACGGC	2 cut(s)	372, 864
BciT130I	CCWGG	5 cut(s)	175, 633, 643, 1148, 1547
BciVI	GTATCC	1 cut(s)	489
BclI	TGATCA	2 cut(s)	688, 1279
BcnI	CCSGG	1 cut(s)	2109
BcoDI	GTCTC	6 cut(s)	274, 389, 1324, 1496, 1572, 2316
BcuI	ACTAGT	1 cut(s)	1631
BfaI	CTAG	4 cut(s)	1085, 1632, 1775, 2286
BfmI	CTRYAG	2 cut(s)	617, 792
BfoI	RGCGCY	1 cut(s)	2086
BfuI	GTATCC	1 cut(s)	489
BglII	AGATCT	2 cut(s)	586, 928
BisI	GCNGC	3 cut(s)	276, 365, 620
BlnI	CCTAGG	1 cut(s)	1774
BlpI	GCTNAGC	1 cut(s)	2139
BlsI	GCNGC	3 cut(s)	277, 366, 621
BmcAI	AGTACT	3 cut(s)	1297, 1540, 2024
Bme1390I	CCNGG	6 cut(s)	175, 633, 643, 1148, 1547, 2109
Bme18I	GGWCC	4 cut(s)	48, 79, 458, 1781
BmgT120I	GGNCC	9 cut(s)	48, 79, 125, 458, 989, 990, 1309, 1781, 1940
BmrFI	CCNGG	6 cut(s)	175, 633, 643, 1148, 1547, 2109
BmsI	GCATC	8 cut(s)	351, 802, 958, 980, 1132, 1534, 1942, 2052
BoxI	GACNNNNGTC	1 cut(s)	266
BpiI	GAAGAC	5 cut(s)	94, 573, 1670, 2043, 2239
BplI	GAGNNNNNCTC	2 cut(s)	248, 280
BpmI	CTGGAG	1 cut(s)	403
Bpu10I	CCTNAGC	1 cut(s)	255
Bpu1102I	GCTNAGC	1 cut(s)	2139
BpuEI	CTTGAG	2 cut(s)	1913, 2360
BpuMI	CCSGG	1 cut(s)	2109
BsaHI	GRCGYC	1 cut(s)	56
BsaI	GGTCTC	2 cut(s)	389, 1496
BsaJI	CCNNGG	8 cut(s)	174, 244, 288, 1146, 1546, 1774, 2108, 2250
BsaWI	WCCGGW	4 cut(s)	34, 228, 1165, 2174
BsaXI	ACNNNNNCTCC	6 cut(s)	133, 163, 218, 248, 320, 350
Bsc4I	CCNNNNNNNGG	2 cut(s)	1411, 1577
Bse118I	RCCGGY	3 cut(s)	45, 122, 1165
Bse1I	ACTGG	4 cut(s)	1338, 1488, 2167, 2358
Bse21I	CCTNAGG	2 cut(s)	995, 1785
Bse3DI	GCAATG	1 cut(s)	1239
BseAI	TCCGGA	1 cut(s)	2174
BseBI	CCWGG	5 cut(s)	175, 633, 643, 1148, 1547
BseDI	CCNNGG	8 cut(s)	174, 244, 288, 1146, 1546, 1774, 2108, 2250
BseGI	GGATG	5 cut(s)	744, 1024, 1312, 1525, 2232
BseLI	CCNNNNNNNGG	2 cut(s)	1411, 1577
BseMI	GCAATG	1 cut(s)	1239
BseMII	CTCAG	7 cut(s)	246, 830, 986, 1817, 2130, 2171, 2393
BseNI	ACTGG	4 cut(s)	1338, 1488, 2167, 2358
BseRI	GAGGAG	5 cut(s)	97, 106, 1179, 1308, 1311
BseSI	GKGCMC	1 cut(s)	993
BseXI	GCAGC	3 cut(s)	262, 351, 631
BseYI	CCCAGC	1 cut(s)	2322
BsgI	GTGCAG	2 cut(s)	2078, 2382
Bsh1236I	CGCG	2 cut(s)	53, 1046
BshFI	GGCC	6 cut(s)	126, 828, 991, 1311, 1337, 1942
BshNI	GGYRCC	2 cut(s)	428, 513
BshTI	ACCGGT	1 cut(s)	1165
BsiHKAI	GWGCWC	1 cut(s)	219
BsiSI	CCGG	7 cut(s)	35, 46, 123, 229, 1166, 2108, 2175
BslFI	GGGAC	7 cut(s)	65, 115, 191, 218, 367, 713, 2159
BslI	CCNNNNNNNGG	2 cut(s)	1411, 1577
BsmAI	GTCTC	6 cut(s)	274, 389, 1324, 1496, 1572, 2316
BsmBI	CGTCTC	1 cut(s)	274
BsmFI	GGGAC	7 cut(s)	65, 115, 191, 218, 367, 713, 2159
BsmI	GAATGC	1 cut(s)	652
BsnI	GGCC	6 cut(s)	126, 828, 991, 1311, 1337, 1942
Bso31I	GGTCTC	2 cut(s)	389, 1496
Bsp120I	GGGCCC	1 cut(s)	989
Bsp1286I	GDGCHC	2 cut(s)	219, 993
Bsp13I	TCCGGA	1 cut(s)	2174
Bsp1720I	GCTNAGC	1 cut(s)	2139
BspANI	GGCC	6 cut(s)	126, 828, 991, 1311, 1337, 1942
BspCNI	CTCAG	7 cut(s)	247, 829, 987, 1816, 2131, 2170, 2394
BspEI	TCCGGA	1 cut(s)	2174
BspFNI	CGCG	2 cut(s)	53, 1046
BspHI	TCATGA	2 cut(s)	1432, 1864
BspMAI	CTGCAG	1 cut(s)	621
BspPI	GGATC	5 cut(s)	239, 633, 1353, 1394, 2291
BspQI	GCTCTTC	2 cut(s)	1719, 2073
BspT107I	GGYRCC	2 cut(s)	428, 513
BspTNI	GGTCTC	2 cut(s)	389, 1496
BsrBI	CCGCTC	2 cut(s)	1064, 2143
BsrDI	GCAATG	1 cut(s)	1239
BsrFI	RCCGGY	3 cut(s)	45, 122, 1165
BsrI	ACTGG	4 cut(s)	1338, 1488, 2167, 2358
BssAI	RCCGGY	3 cut(s)	45, 122, 1165
BssECI	CCNNGG	8 cut(s)	174, 244, 288, 1146, 1546, 1774, 2108, 2250
BssNI	GRCGYC	1 cut(s)	56
BssSI	CACGAG	1 cut(s)	1008
BssT1I	CCWWGG	3 cut(s)	288, 1774, 2250
Bst2BI	CACGAG	1 cut(s)	1008
Bst2UI	CCWGG	5 cut(s)	175, 633, 643, 1148, 1547
Bst4CI	ACNGT	5 cut(s)	374, 448, 454, 704, 2206
Bst6I	CTCTTC	4 cut(s)	1564, 1719, 1946, 2073
BstACI	GRCGYC	1 cut(s)	56
BstAPI	GCANNNNNTGC	2 cut(s)	625, 2219
BstC8I	GCNNGC	5 cut(s)	124, 251, 606, 949, 2096
BstF5I	GGATG	5 cut(s)	744, 1024, 1312, 1525, 2232
BstFNI	CGCG	2 cut(s)	53, 1046
BstH2I	RGCGCY	1 cut(s)	2086
BstHHI	GCGC	2 cut(s)	1046, 2085
BstMAI	GTCTC	6 cut(s)	274, 389, 1324, 1496, 1572, 2316
BstMWI	GCNNNNNNNGC	5 cut(s)	625, 1031, 1939, 2091, 2219
BstNI	CCWGG	5 cut(s)	175, 633, 643, 1148, 1547
BstPAI	GACNNNNGTC	1 cut(s)	266
BstSCI	CCNGG	6 cut(s)	173, 631, 641, 1146, 1545, 2107
BstSFI	CTRYAG	2 cut(s)	617, 792
BstSLI	GKGCMC	1 cut(s)	993
BstUI	CGCG	2 cut(s)	53, 1046
BstV1I	GCAGC	3 cut(s)	262, 351, 631
BstV2I	GAAGAC	5 cut(s)	94, 573, 1670, 2043, 2239
BstX2I	RGATCY	6 cut(s)	231, 586, 638, 928, 1345, 2296
BstXI	CCANNNNNNTGG	1 cut(s)	1720
BstYI	RGATCY	6 cut(s)	231, 586, 638, 928, 1345, 2296
Bsu36I	CCTNAGG	2 cut(s)	995, 1785
BsuI	GTATCC	1 cut(s)	489
BsuRI	GGCC	6 cut(s)	126, 828, 991, 1311, 1337, 1942
BtgZI	GCGATG	2 cut(s)	374, 744
BtsCI	GGATG	5 cut(s)	744, 1024, 1312, 1525, 2232
BtsI	GCAGTG	3 cut(s)	83, 529, 2061
BtsIMutI	CAGTG	7 cut(s)	83, 529, 715, 1495, 2061, 2351, 2399
Cac8I	GCNNGC	5 cut(s)	124, 251, 606, 949, 2096
CciI	TCATGA	2 cut(s)	1432, 1864
CfoI	GCGC	2 cut(s)	1046, 2085
Cfr10I	RCCGGY	3 cut(s)	45, 122, 1165
Cfr13I	GGNCC	9 cut(s)	48, 79, 125, 458, 989, 990, 1309, 1781, 1940
CpoI	CGGWCCG	1 cut(s)	48
CseI	GACGC	2 cut(s)	64, 2198
CsiI	ACCWGGT	1 cut(s)	631
Csp6I	GTAC	5 cut(s)	293, 411, 1296, 1539, 2023
CspAI	ACCGGT	1 cut(s)	1165
CspI	CGGWCCG	1 cut(s)	48
CviQI	GTAC	5 cut(s)	293, 411, 1296, 1539, 2023
EaeI	YGGCCR	1 cut(s)	1335
Eam1104I	CTCTTC	4 cut(s)	1564, 1719, 1946, 2073
EarI	CTCTTC	4 cut(s)	1564, 1719, 1946, 2073
EciI	GGCGGA	2 cut(s)	109, 141
Ecl136II	GAGCTC	1 cut(s)	217
Eco130I	CCWWGG	3 cut(s)	288, 1774, 2250
Eco24I	GRGCYC	2 cut(s)	219, 993
Eco31I	GGTCTC	2 cut(s)	389, 1496
Eco47I	GGWCC	4 cut(s)	48, 79, 458, 1781
Eco53kI	GAGCTC	1 cut(s)	217
Eco57I	CTGAAG	2 cut(s)	567, 851
Eco81I	CCTNAGG	2 cut(s)	995, 1785
EcoICRI	GAGCTC	1 cut(s)	217
EcoO109I	RGGNCCY	3 cut(s)	79, 989, 990
EcoRI	GAATTC	2 cut(s)	540, 1553
EcoRII	CCWGG	5 cut(s)	173, 631, 641, 1146, 1545
EcoT14I	CCWWGG	3 cut(s)	288, 1774, 2250
EcoT22I	ATGCAT	2 cut(s)	973, 2215
EcoT38I	GRGCYC	2 cut(s)	219, 993
ErhI	CCWWGG	3 cut(s)	288, 1774, 2250
Esp3I	CGTCTC	1 cut(s)	274
FalI	AAGNNNNNCTT	4 cut(s)	302, 334, 1904, 1936
FaqI	GGGAC	7 cut(s)	65, 115, 191, 218, 367, 713, 2159
FauI	CCCGC	1 cut(s)	2136
FbaI	TGATCA	2 cut(s)	688, 1279
Fnu4HI	GCNGC	3 cut(s)	276, 365, 620
FokI	GGATG	5 cut(s)	731, 1031, 1299, 1512, 2239
FriOI	GRGCYC	2 cut(s)	219, 993
Fsp4HI	GCNGC	3 cut(s)	276, 365, 620
FspBI	CTAG	4 cut(s)	1085, 1632, 1775, 2286
GlaI	GCGC	2 cut(s)	1045, 2084
GluI	GCNGC	3 cut(s)	276, 365, 620
GsaI	CCCAGC	1 cut(s)	2326
GsuI	CTGGAG	1 cut(s)	403
HaeII	RGCGCY	1 cut(s)	2086
HaeIII	GGCC	6 cut(s)	126, 828, 991, 1311, 1337, 1942
HapII	CCGG	7 cut(s)	35, 46, 123, 229, 1166, 2108, 2175
HgaI	GACGC	2 cut(s)	64, 2198
HhaI	GCGC	2 cut(s)	1046, 2085
Hin1I	GRCGYC	1 cut(s)	56
Hin6I	GCGC	2 cut(s)	1044, 2083
HinP1I	GCGC	2 cut(s)	1044, 2083
HincII	GTYRAC	1 cut(s)	1248
HindII	GTYRAC	1 cut(s)	1248
HindIII	AAGCTT	4 cut(s)	1259, 1274, 1877, 2384
HpaII	CCGG	7 cut(s)	35, 46, 123, 229, 1166, 2108, 2175
HphI	GGTGA	4 cut(s)	218, 698, 1025, 1803
Hpy166II	GTNNAC	5 cut(s)	328, 1248, 1476, 1781, 1918
Hpy8I	GTNNAC	5 cut(s)	328, 1248, 1476, 1781, 1918
Hpy99I	CGWCG	3 cut(s)	58, 215, 1967
HpyAV	CCTTC	7 cut(s)	233, 1049, 1205, 1439, 1527, 1697, 1841
HpyCH4III	ACNGT	5 cut(s)	374, 448, 454, 704, 2206
HpyCH4IV	ACGT	1 cut(s)	2197
HpyF10VI	GCNNNNNNNGC	5 cut(s)	625, 1031, 1939, 2091, 2219
HpySE526I	ACGT	1 cut(s)	2197
Hsp92I	GRCGYC	1 cut(s)	56
HspAI	GCGC	2 cut(s)	1044, 2083
KflI	GGGWCCC	1 cut(s)	79
Kpn2I	TCCGGA	1 cut(s)	2174
KroI	GCCGGC	1 cut(s)	122
KroNI	GCCGGC	1 cut(s)	124
Ksp22I	TGATCA	2 cut(s)	688, 1279
LguI	GCTCTTC	2 cut(s)	1719, 2073
LmnI	GCTCC	3 cut(s)	37, 182, 923
Lsp1109I	GCAGC	3 cut(s)	262, 351, 631
LweI	GCATC	8 cut(s)	351, 802, 958, 980, 1132, 1534, 1942, 2052
MabI	ACCWGGT	1 cut(s)	631
MaeI	CTAG	4 cut(s)	1085, 1632, 1775, 2286
MaeII	ACGT	1 cut(s)	2197
MaeIII	GTNAC	4 cut(s)	448, 1108, 1587, 1627
MbiI	CCGCTC	2 cut(s)	1064, 2143
MfeI	CAATTG	4 cut(s)	756, 1266, 1452, 1842
MflI	RGATCY	6 cut(s)	231, 586, 638, 928, 1345, 2296
MhlI	GDGCHC	2 cut(s)	219, 993
MlsI	TGGCCA	1 cut(s)	1337
MluNI	TGGCCA	1 cut(s)	1337
MlyI	GAGTC	4 cut(s)	140, 200, 1253, 2318
MmeI	TCCRAC	4 cut(s)	234, 864, 1186, 2166
Mox20I	TGGCCA	1 cut(s)	1337
Mph1103I	ATGCAT	2 cut(s)	973, 2215
MroI	TCCGGA	1 cut(s)	2174
MroNI	GCCGGC	1 cut(s)	122
MroXI	GAANNNNTTC	3 cut(s)	544, 1375, 1516
MscI	TGGCCA	1 cut(s)	1337
MseI	TTAA	6 cut(s)	170, 1535, 1670, 2208, 2216, 2382
Msp20I	TGGCCA	1 cut(s)	1337
MspA1I	CMGCKG	3 cut(s)	275, 2138, 2326
MspI	CCGG	7 cut(s)	35, 46, 123, 229, 1166, 2108, 2175
MspR9I	CCNGG	6 cut(s)	175, 633, 643, 1148, 1547, 2109
MunI	CAATTG	4 cut(s)	756, 1266, 1452, 1842
Mva1269I	GAATGC	1 cut(s)	652
MvaI	CCWGG	5 cut(s)	175, 633, 643, 1148, 1547
MvnI	CGCG	2 cut(s)	53, 1046
MwoI	GCNNNNNNNGC	5 cut(s)	625, 1031, 1939, 2091, 2219
NaeI	GCCGGC	1 cut(s)	124
NciI	CCSGG	1 cut(s)	2109
NgoMIV	GCCGGC	1 cut(s)	122
NmeAIII	GCCGAG	2 cut(s)	66, 225
NmuCI	GTSAC	3 cut(s)	1108, 1587, 1627
NsiI	ATGCAT	2 cut(s)	973, 2215
PagI	TCATGA	2 cut(s)	1432, 1864
PciSI	GCTCTTC	2 cut(s)	1719, 2073
PctI	GAATGC	1 cut(s)	652
PdiI	GCCGGC	1 cut(s)	124
PdmI	GAANNNNTTC	3 cut(s)	544, 1375, 1516
PflMI	CCANNNNNTGG	1 cut(s)	1577
PfoI	TCCNGGA	1 cut(s)	641
PinAI	ACCGGT	1 cut(s)	1165
PkrI	GCNGC	3 cut(s)	277, 366, 621
PleI	GAGTC	4 cut(s)	140, 200, 1252, 2317
PpsI	GAGTC	4 cut(s)	140, 200, 1252, 2317
PpuMI	RGGWCCY	1 cut(s)	79
PshAI	GACNNNNGTC	1 cut(s)	266
PsiI	TTATAA	2 cut(s)	941, 1080
Psp124BI	GAGCTC	1 cut(s)	219
Psp5II	RGGWCCY	1 cut(s)	79
Psp6I	CCWGG	5 cut(s)	173, 631, 641, 1146, 1545
PspFI	CCCAGC	1 cut(s)	2322
PspGI	CCWGG	5 cut(s)	173, 631, 641, 1146, 1545
PspOMI	GGGCCC	1 cut(s)	989
PspPI	GGNCC	9 cut(s)	48, 79, 125, 458, 989, 990, 1309, 1781, 1940
PspPPI	RGGWCCY	1 cut(s)	79
PstI	CTGCAG	1 cut(s)	621
PsuI	RGATCY	6 cut(s)	231, 586, 638, 928, 1345, 2296
PvuII	CAGCTG	2 cut(s)	2138, 2326
RsaI	GTAC	5 cut(s)	294, 412, 1297, 1540, 2024
RsaNI	GTAC	5 cut(s)	293, 411, 1296, 1539, 2023
Rsr2I	CGGWCCG	1 cut(s)	48
RsrII	CGGWCCG	1 cut(s)	48
SacI	GAGCTC	1 cut(s)	219
SapI	GCTCTTC	2 cut(s)	1719, 2073
SaqAI	TTAA	6 cut(s)	170, 1535, 1670, 2208, 2216, 2382
SatI	GCNGC	3 cut(s)	276, 365, 620
Sau96I	GGNCC	9 cut(s)	48, 79, 125, 458, 989, 990, 1309, 1781, 1940
ScaI	AGTACT	3 cut(s)	1297, 1540, 2024
SchI	GAGTC	4 cut(s)	140, 200, 1253, 2318
ScrFI	CCNGG	6 cut(s)	175, 633, 643, 1148, 1547, 2109
SduI	GDGCHC	2 cut(s)	219, 993
SexAI	ACCWGGT	1 cut(s)	631
SfaNI	GCATC	8 cut(s)	351, 802, 958, 980, 1132, 1534, 1942, 2052
SfcI	CTRYAG	2 cut(s)	617, 792
SinI	GGWCC	4 cut(s)	48, 79, 458, 1781
SmlI	CTYRAG	2 cut(s)	1928, 2339
SmoI	CTYRAG	2 cut(s)	1928, 2339
SpeI	ACTAGT	1 cut(s)	1631
SspI	AATATT	1 cut(s)	1219
SspMI	CTAG	4 cut(s)	1085, 1632, 1775, 2286
SstI	GAGCTC	1 cut(s)	219
StyD4I	CCNGG	6 cut(s)	173, 631, 641, 1146, 1545, 2107
StyI	CCWWGG	3 cut(s)	288, 1774, 2250
TaaI	ACNGT	5 cut(s)	374, 448, 454, 704, 2206
TaiI	ACGT	1 cut(s)	2200
TaqI	TCGA	4 cut(s)	15, 1060, 1852, 1962
TatI	WGTACW	3 cut(s)	1295, 1538, 2022
Tru1I	TTAA	6 cut(s)	170, 1535, 1670, 2208, 2216, 2382
Tru9I	TTAA	6 cut(s)	170, 1535, 1670, 2208, 2216, 2382
TscAI	CASTG	7 cut(s)	90, 529, 715, 1495, 2061, 2358, 2406
TseFI	GTSAC	3 cut(s)	1108, 1587, 1627
TseI	GCWGC	3 cut(s)	275, 364, 619
Tsp45I	GTSAC	3 cut(s)	1108, 1587, 1627
TspGWI	ACGGA	5 cut(s)	195, 226, 256, 508, 1715
TspRI	CASTG	7 cut(s)	90, 529, 715, 1495, 2061, 2358, 2406
Van91I	CCANNNNNTGG	1 cut(s)	1577
VpaK11BI	GGWCC	4 cut(s)	48, 79, 458, 1781
XapI	RAATTY	3 cut(s)	540, 1553, 1816
XcmI	CCANNNNNNNNNTGG	2 cut(s)	67, 1345
XmaJI	CCTAGG	1 cut(s)	1774
XmnI	GAANNNNTTC	3 cut(s)	544, 1375, 1516
XspI	CTAG	4 cut(s)	1085, 1632, 1775, 2286
ZrmI	AGTACT	3 cut(s)	1297, 1540, 2024
Zsp2I	ATGCAT	2 cut(s)	973, 2215

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.