Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005056.1

Orthogroup ID

OG0007206

Physical Location & Seq

Genomic Coordinates Forward (+)

32511 .. 39082

Gene Structure 6572 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005056.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

atgaggttcaacttcgacttggaggaaactaaaccggactcgagccggtccgccacccccaaagacgaagtcgaatgggtcctactccacaaccatccggtcttcacctccaccgcagccccggcccaccagcccaccgacgattctccgccgctcagaaacctcttagcctgggacggagcctctcgcctttacttctgggactccgatgacctctgccttcaccggatctccgtccgcctcggcgagcctgagccgacctccgtcttcgccgcttcgccctccaagatactgaaaccagatgtgaagctgaactttgctgttaacaaagtctccatcaatagaaacgggacggcaatgctcctttatggttccgatggtctatgcattatgtatctttacgggcatcttattcaaccagagcaggtgtattatctacagcctgtgcaaccaggtagatccaggaatgccacatcaatttgcccagtggacttttcatttggtggtgatcacttgtgggactgttttagtgttttcattttgttcagcgatggttcaatttacatcctttgtccaattgttccatttggaagtgtctataaatgggaatcgattgtagatatatataatgatgctcagacatttggcctgaagtcacccaactcaacggctgttagtaattcaaatctggctatttcttggttggaagcaacatttccagaaattgcagggcaaacaacagatggagcagatctatctgtaataagagctcgtccttatgctttatttgatgcatcactctcactgcagggacctttgaggaaagtatctcgtggtgaggatgaagcggattcagcatttcggggtgcagaatgtgaaggtcgagcggttagctttctttataatttagtcagcaaagattcaattcttgttactgcttggagtggtgggcaactgcaaatagatgctctggctgatgaaatccaaccggtctggaatgttggttgtcctcctcgccttcgtgttgattcccatgacaatattcatggtcttgcaatgatctgtgagtcaaccccagataagctttcaactgtgaagcttgatcaaccacttgatagtactctttggttgggccatcctccccctctgttgagactggctattgtggatctggctctgcctaagaaagcaggaagtgattctcttgttatgatgtttgttgatcccctcatgctggaaagaatatacacccttcatgatggagggatagattcaatagtgttgcattatctcccatttacaagtcagaacagtggcaagaatgagaccatgagaactccttctgtgcatcctgtcctaagtacttgccagggagaattctcctcacactctccactttctggttttgtgtcattatcagattcatttgggtattcatggatagtggcagtcactgcttctcaagaatgtattgtgctagagatgaaaaccttaaacctgttgcttcctcttcatgttgatacggagaaaaaatccattcttccagaagacccaaaagagaaagataaaccagatattatcataagcaaagaactcctaggtggacctaaggtggttcttgttcctcagacatcaccaaatttgcgttctgtttctgctgattcaattgaaggtcgatcaatgcttcatgaatacttcaagcttttccatgaaaattatgtggagtatgcgcacaaggtttactttgaactcaagcatcatgggccgcacttgaagaggataatcgatgaccaacatggtcgtttaggtggggcaaagcagaggcttttgcaagttgaggaaaagtactcggacttggaacaccgcattaatgatgcagtgcagatgcagaatcatctggaggagcgcctaaaacgcttgcggagcttacccggggttcataagaaaccactttccacagctgagcgggacttcaaatctcagcttgaccagttttccggggttgagttggatgcattacactctactgttaatgcgttaactgcaaggatgaaaagacacggacaatcacctaaggccaatgtatcaaaccaaaagaagctggtatcaaggaggaaggatcctgtgcaagagccctgccacagacggccggcagccgccctaatgatgatagtgggggtgcggctggatatcctatcagctgcagcgagtggttttgcagcaggccacatgctaaaagttgtgcctcactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000054 GO:0000055 GO:0000056 GO:0002376 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0006952 GO:0006955 GO:0008104 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009627 GO:0009814 GO:0010467 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0017038 GO:0022613 GO:0031503 GO:0031967 GO:0031975 GO:0032991 GO:0033036 GO:0033365 GO:0033750 GO:0034504 GO:0034613 GO:0042254 GO:0042886 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045087 GO:0045184 GO:0046907 GO:0050657 GO:0050658 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051236 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051704 GO:0051707 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071428 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Nup88

Protein Analysis

750

Amino Acids

83.34

Weight (kDa)

6.19

Isoelectric Point (pI)

43.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007206)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05680
fragaria_vesca	FvH4_7g24380
malus_domestica	MD01G1152200.v1.1 MD07G1220900.v1.1 MD07G1221200.v1.1
prunus_persica	Prupe.2G249200_v2.0.a1 Prupe.2G249200_v2.0.a1 Prupe.2G249200_v2.0.a1 Prupe.2G249200_v2.0.a1 Prupe.2G249200_v2.0.a1 Prupe.2G249200_v2.0.a1 Prupe.2G249200_v2.0.a1
pyrus_communis	pycom01g16990
rosa_chinensis	RchiOBHm_Chr1g0370081
rosa_laevigata	RLG00000027076
rosa_multiflora	Rmu_co8237259.1_g000001 Rmu_sc0005056.1_g000009
rosa_roxburghii	Rroxscaffold_4G00286840 Rroxscaffold_4G00287190
rosa_rugosa	Rorug01G0353700
rosa_samantha	Rh1AG362400 Rh1BG325600 Rh1CG338900 Rh1DG356100
rosa_wichuraiana	Rw1G031890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	903
AarI	CACCTGC	1 cut(s)	415
Acc16I	TGCGCA	1 cut(s)	1731
Acc36I	ACCTGC	1 cut(s)	415
AccB7I	CCANNNNNTGG	1 cut(s)	1400
AccBSI	CCGCTC	3 cut(s)	154, 887, 1966
AclWI	GGATC	6 cut(s)	236, 453, 1176, 1217, 2114, 2127
AcoI	YGGCCR	1 cut(s)	2147
AcsI	RAATTY	2 cut(s)	1376, 1639
AcuI	CTGAAG	1 cut(s)	671
AfaI	GTAC	3 cut(s)	1120, 1363, 1847
AfiI	CCNNNNNNNGG	2 cut(s)	1234, 1400
AgeI	ACCGGT	1 cut(s)	988
AjnI	CCWGG	4 cut(s)	170, 451, 461, 1368
AjuI	GAANNNNNNNTTGG	2 cut(s)	1630, 1662
Alw21I	GWGCWC	1 cut(s)	772
Alw26I	GTCTC	3 cut(s)	337, 1147, 1319
AlwI	GGATC	6 cut(s)	236, 453, 1176, 1217, 2114, 2127
AlwNI	CAGNNNCTG	1 cut(s)	1454
Ama87I	CYCGRG	2 cut(s)	40, 1931
AoxI	GGCC	7 cut(s)	123, 646, 1132, 1763, 2076, 2147, 2224
ApeKI	GCWGC	5 cut(s)	116, 2153, 2201, 2204, 2219
ApoI	RAATTY	2 cut(s)	1376, 1639
ArsI	GACNNNNNNTTYG	4 cut(s)	54, 86, 482, 514
AseI	ATTAAT	1 cut(s)	1869
AsiGI	ACCGGT	1 cut(s)	988
Asp700I	GAANNNNTTC	2 cut(s)	1198, 1339
AspA2I	CCTAGG	1 cut(s)	1597
AspLEI	GCGC	2 cut(s)	1732, 1908
AspS9I	GGNCC	7 cut(s)	48, 79, 124, 812, 1132, 1604, 1763
AsuC2I	CCSGG	4 cut(s)	122, 1932, 1933, 1999
AsuHPI	GGTGA	7 cut(s)	97, 215, 518, 648, 848, 1626, 2061
AvaI	CYCGRG	2 cut(s)	40, 1931
AvaII	GGWCC	4 cut(s)	48, 79, 812, 1604
AvrII	CCTAGG	1 cut(s)	1597
AxyI	CCTNAGG	2 cut(s)	1608, 2073
BamHI	GGATCC	1 cut(s)	2119
BanII	GRGCYC	2 cut(s)	772, 2136
BauI	CACGAG	1 cut(s)	831
BbsI	GAAGAC	3 cut(s)	94, 259, 1554
Bbv12I	GWGCWC	1 cut(s)	772
BbvI	GCAGC	5 cut(s)	128, 2165, 2188, 2216, 2231
BccI	CCATC	7 cut(s)	102, 344, 371, 545, 737, 1143, 1253
BceAI	ACGGC	3 cut(s)	369, 684, 2162
BciT130I	CCWGG	4 cut(s)	172, 453, 463, 1370
BclI	TGATCA	2 cut(s)	508, 1102
BcnI	CCSGG	4 cut(s)	122, 1932, 1933, 1999
BcoDI	GTCTC	3 cut(s)	337, 1147, 1319
BfaI	CTAG	2 cut(s)	1478, 1598
BfmI	CTRYAG	3 cut(s)	437, 806, 2202
BfoI	RGCGCY	1 cut(s)	1909
BfuAI	ACCTGC	1 cut(s)	415
BglII	AGATCT	1 cut(s)	751
BlnI	CCTAGG	1 cut(s)	1597
BlpI	GCTNAGC	1 cut(s)	1962
BmcAI	AGTACT	3 cut(s)	1120, 1363, 1847
Bme1390I	CCNGG	8 cut(s)	122, 172, 453, 463, 1370, 1932, 1933, 1999
Bme18I	GGWCC	4 cut(s)	48, 79, 812, 1604
BmeT110I	CYCGRG	2 cut(s)	40, 1931
BmgT120I	GGNCC	7 cut(s)	48, 79, 124, 812, 1132, 1604, 1763
BmiI	GGNNCC	5 cut(s)	80, 181, 373, 813, 2121
BmrFI	CCNGG	8 cut(s)	122, 172, 453, 463, 1370, 1932, 1933, 1999
BmrI	ACTGGG	1 cut(s)	479
BmuI	ACTGGG	1 cut(s)	479
BoxI	GACNNNNGTC	1 cut(s)	263
BpiI	GAAGAC	3 cut(s)	94, 259, 1554
BplI	GAGNNNNNCTC	2 cut(s)	245, 277
BpmI	CTGGAG	1 cut(s)	1919
Bpu10I	CCTNAGC	1 cut(s)	252
Bpu1102I	GCTNAGC	1 cut(s)	1962
BpuEI	CTTGAG	2 cut(s)	1446, 1736
BpuMI	CCSGG	4 cut(s)	122, 1932, 1933, 1999
Bsa29I	ATCGAT	2 cut(s)	611, 1785
BsaI	GGTCTC	1 cut(s)	1319
BsaJI	CCNNGG	8 cut(s)	120, 171, 241, 1369, 1597, 1931, 1932, 1998
BsaWI	WCCGGW	4 cut(s)	34, 97, 225, 988
BsaXI	ACNNNNNCTCC	4 cut(s)	215, 245, 317, 347
Bsc4I	CCNNNNNNNGG	2 cut(s)	1234, 1400
Bse118I	RCCGGY	3 cut(s)	45, 988, 2149
Bse1I	ACTGG	3 cut(s)	485, 1161, 1990
Bse21I	CCTNAGG	2 cut(s)	1608, 2073
Bse3DI	GCAATG	2 cut(s)	363, 1062
BseBI	CCWGG	4 cut(s)	172, 453, 463, 1370
BseCI	ATCGAT	2 cut(s)	611, 1785
BseDI	CCNNGG	8 cut(s)	120, 171, 241, 1369, 1597, 1931, 1932, 1998
BseGI	GGATG	7 cut(s)	94, 564, 847, 1135, 1348, 2017, 2055
BseLI	CCNNNNNNNGG	2 cut(s)	1234, 1400
BseMI	GCAATG	2 cut(s)	363, 1062
BseMII	CTCAG	6 cut(s)	169, 243, 650, 1640, 1953, 1994
BseNI	ACTGG	3 cut(s)	485, 1161, 1990
BseRI	GAGGAG	3 cut(s)	1002, 1372, 1916
BseX3I	CGGCCG	1 cut(s)	2147
BseXI	GCAGC	5 cut(s)	128, 2165, 2188, 2216, 2231
BsgI	GTGCAG	2 cut(s)	888, 1901
Bsh1285I	CGRYCG	1 cut(s)	2150
BshFI	GGCC	7 cut(s)	125, 648, 1134, 1765, 2078, 2149, 2226
BshTI	ACCGGT	1 cut(s)	988
BshVI	ATCGAT	2 cut(s)	611, 1785
BsiEI	CGRYCG	1 cut(s)	2150
BsiHKAI	GWGCWC	1 cut(s)	772
BsiHKCI	CYCGRG	2 cut(s)	40, 1931
BsiSI	CCGG	9 cut(s)	35, 46, 98, 122, 226, 989, 1932, 1998, 2150
BslFI	GGGAC	6 cut(s)	188, 215, 364, 533, 825, 1982
BslI	CCNNNNNNNGG	2 cut(s)	1234, 1400
BsmAI	GTCTC	3 cut(s)	337, 1147, 1319
BsmFI	GGGAC	6 cut(s)	188, 215, 364, 533, 825, 1982
BsmI	GAATGC	1 cut(s)	472
BsnI	GGCC	7 cut(s)	125, 648, 1134, 1765, 2078, 2149, 2226
Bso31I	GGTCTC	1 cut(s)	1319
BsoBI	CYCGRG	2 cut(s)	40, 1931
Bsp1286I	GDGCHC	2 cut(s)	772, 2136
Bsp1720I	GCTNAGC	1 cut(s)	1962
BspANI	GGCC	7 cut(s)	125, 648, 1134, 1765, 2078, 2149, 2226
BspCNI	CTCAG	6 cut(s)	168, 244, 649, 1639, 1954, 1993
BspDI	ATCGAT	2 cut(s)	611, 1785
BspHI	TCATGA	2 cut(s)	1255, 1687
BspLI	GGNNCC	5 cut(s)	80, 181, 373, 813, 2121
BspMAI	CTGCAG	2 cut(s)	810, 2206
BspMI	ACCTGC	1 cut(s)	415
BspPI	GGATC	6 cut(s)	236, 453, 1176, 1217, 2114, 2127
BspTNI	GGTCTC	1 cut(s)	1319
BsrBI	CCGCTC	3 cut(s)	154, 887, 1966
BsrDI	GCAATG	2 cut(s)	363, 1062
BsrFI	RCCGGY	3 cut(s)	45, 988, 2149
BsrI	ACTGG	3 cut(s)	485, 1161, 1990
BssAI	RCCGGY	3 cut(s)	45, 988, 2149
BssECI	CCNNGG	8 cut(s)	120, 171, 241, 1369, 1597, 1931, 1932, 1998
BssSI	CACGAG	1 cut(s)	831
BssT1I	CCWWGG	1 cut(s)	1597
Bst2BI	CACGAG	1 cut(s)	831
Bst2UI	CCWGG	4 cut(s)	172, 453, 463, 1370
Bst4CI	ACNGT	4 cut(s)	524, 1093, 1313, 2029
Bst6I	CTCTTC	2 cut(s)	1515, 1769
BstAPI	GCANNNNNTGC	1 cut(s)	1454
BstC8I	GCNNGC	4 cut(s)	248, 1919, 2151, 2224
BstF5I	GGATG	7 cut(s)	94, 564, 847, 1135, 1348, 2017, 2055
BstH2I	RGCGCY	1 cut(s)	1909
BstHHI	GCGC	2 cut(s)	1732, 1908
BstMAI	GTCTC	3 cut(s)	337, 1147, 1319
BstMCI	CGRYCG	1 cut(s)	2150
BstMWI	GCNNNNNNNGC	7 cut(s)	122, 854, 1454, 1762, 1914, 1923, 2042
BstNI	CCWGG	4 cut(s)	172, 453, 463, 1370
BstNSI	RCATGY	1 cut(s)	2233
BstPAI	GACNNNNGTC	1 cut(s)	263
BstSCI	CCNGG	8 cut(s)	120, 170, 451, 461, 1368, 1930, 1931, 1997
BstSFI	CTRYAG	3 cut(s)	437, 806, 2202
BstV1I	GCAGC	5 cut(s)	128, 2165, 2188, 2216, 2231
BstV2I	GAAGAC	3 cut(s)	94, 259, 1554
BstX2I	RGATCY	5 cut(s)	228, 458, 751, 1168, 2119
BstYI	RGATCY	5 cut(s)	228, 458, 751, 1168, 2119
BstZI	CGGCCG	1 cut(s)	2147
Bsu15I	ATCGAT	2 cut(s)	611, 1785
Bsu36I	CCTNAGG	2 cut(s)	1608, 2073
BsuRI	GGCC	7 cut(s)	125, 648, 1134, 1765, 2078, 2149, 2226
BsuTUI	ATCGAT	2 cut(s)	611, 1785
BtgZI	GCGATG	1 cut(s)	564
BtsCI	GGATG	7 cut(s)	94, 564, 847, 1135, 1348, 2017, 2055
BtsI	GCAGTG	3 cut(s)	803, 1452, 1884
BtsIMutI	CAGTG	6 cut(s)	492, 803, 1318, 1452, 1884, 2248
BveI	ACCTGC	1 cut(s)	415
Cac8I	GCNNGC	4 cut(s)	248, 1919, 2151, 2224
CaiI	CAGNNNCTG	1 cut(s)	1454
CciI	TCATGA	2 cut(s)	1255, 1687
CfoI	GCGC	2 cut(s)	1732, 1908
Cfr10I	RCCGGY	3 cut(s)	45, 988, 2149
Cfr13I	GGNCC	7 cut(s)	48, 79, 124, 812, 1132, 1604, 1763
Cfr9I	CCCGGG	1 cut(s)	1931
ClaI	ATCGAT	2 cut(s)	611, 1785
CpoI	CGGWCCG	1 cut(s)	48
CsiI	ACCWGGT	1 cut(s)	451
Csp6I	GTAC	3 cut(s)	1119, 1362, 1846
CspAI	ACCGGT	1 cut(s)	988
CspI	CGGWCCG	1 cut(s)	48
CviQI	GTAC	3 cut(s)	1119, 1362, 1846
EaeI	YGGCCR	1 cut(s)	2147
EagI	CGGCCG	1 cut(s)	2147
Eam1104I	CTCTTC	2 cut(s)	1515, 1769
EarI	CTCTTC	2 cut(s)	1515, 1769
EciI	GGCGGA	3 cut(s)	40, 138, 227
Ecl136II	GAGCTC	1 cut(s)	770
EclXI	CGGCCG	1 cut(s)	2147
Eco130I	CCWWGG	1 cut(s)	1597
Eco24I	GRGCYC	2 cut(s)	772, 2136
Eco31I	GGTCTC	1 cut(s)	1319
Eco32I	GATATC	1 cut(s)	2191
Eco47I	GGWCC	4 cut(s)	48, 79, 812, 1604
Eco52I	CGGCCG	1 cut(s)	2147
Eco53kI	GAGCTC	1 cut(s)	770
Eco57I	CTGAAG	1 cut(s)	671
Eco81I	CCTNAGG	2 cut(s)	1608, 2073
Eco88I	CYCGRG	2 cut(s)	40, 1931
EcoICRI	GAGCTC	1 cut(s)	770
EcoO109I	RGGNCCY	2 cut(s)	79, 812
EcoRI	GAATTC	1 cut(s)	1376
EcoRII	CCWGG	4 cut(s)	170, 451, 461, 1368
EcoRV	GATATC	1 cut(s)	2191
EcoT14I	CCWWGG	1 cut(s)	1597
EcoT22I	ATGCAT	3 cut(s)	389, 796, 2017
EcoT38I	GRGCYC	2 cut(s)	772, 2136
ErhI	CCWWGG	1 cut(s)	1597
FalI	AAGNNNNNCTT	4 cut(s)	299, 331, 1727, 1759
FaqI	GGGAC	6 cut(s)	188, 215, 364, 533, 825, 1982
FauI	CCCGC	1 cut(s)	1959
FbaI	TGATCA	2 cut(s)	508, 1102
FokI	GGATG	7 cut(s)	81, 551, 854, 1122, 1335, 2024, 2062
FriOI	GRGCYC	2 cut(s)	772, 2136
FspAI	RTGCGCAY	1 cut(s)	1731
FspBI	CTAG	2 cut(s)	1478, 1598
FspI	TGCGCA	1 cut(s)	1731
GlaI	GCGC	2 cut(s)	1731, 1907
GsuI	CTGGAG	1 cut(s)	1919
HaeII	RGCGCY	1 cut(s)	1909
HaeIII	GGCC	7 cut(s)	125, 648, 1134, 1765, 2078, 2149, 2226
HapII	CCGG	9 cut(s)	35, 46, 98, 122, 226, 989, 1932, 1998, 2150
HhaI	GCGC	2 cut(s)	1732, 1908
Hin6I	GCGC	2 cut(s)	1730, 1906
HinP1I	GCGC	2 cut(s)	1730, 1906
HincII	GTYRAC	3 cut(s)	325, 1071, 2040
HindII	GTYRAC	3 cut(s)	325, 1071, 2040
HindIII	AAGCTT	3 cut(s)	1082, 1097, 1700
HpaI	GTTAAC	2 cut(s)	325, 2040
HpaII	CCGG	9 cut(s)	35, 46, 98, 122, 226, 989, 1932, 1998, 2150
HphI	GGTGA	7 cut(s)	97, 215, 518, 648, 848, 1626, 2061
Hpy166II	GTNNAC	6 cut(s)	325, 490, 1071, 1604, 1741, 2040
Hpy188I	TCNGA	8 cut(s)	158, 208, 376, 639, 1308, 1420, 1629, 1852
Hpy188III	TCNNGA	7 cut(s)	719, 994, 1256, 1463, 1544, 1688, 1898
Hpy8I	GTNNAC	6 cut(s)	325, 490, 1071, 1604, 1741, 2040
Hpy99I	CGWCG	1 cut(s)	143
HpyAV	CCTTC	7 cut(s)	230, 872, 1028, 1262, 1350, 1664, 2110
HpyCH4III	ACNGT	4 cut(s)	524, 1093, 1313, 2029
HpyF10VI	GCNNNNNNNGC	7 cut(s)	122, 854, 1454, 1762, 1914, 1923, 2042
HspAI	GCGC	2 cut(s)	1730, 1906
KroI	GCCGGC	1 cut(s)	2149
KroNI	GCCGGC	1 cut(s)	2151
Ksp22I	TGATCA	2 cut(s)	508, 1102
KspAI	GTTAAC	2 cut(s)	325, 2040
LmnI	GCTCC	5 cut(s)	179, 366, 746, 1903, 1923
Lsp1109I	GCAGC	5 cut(s)	128, 2165, 2188, 2216, 2231
MabI	ACCWGGT	1 cut(s)	451
MaeI	CTAG	2 cut(s)	1478, 1598
MaeIII	GTNAC	3 cut(s)	654, 931, 1450
MbiI	CCGCTC	3 cut(s)	154, 887, 1966
MboII	GAAGA	6 cut(s)	94, 259, 1502, 1532, 1559, 1786
MfeI	CAATTG	2 cut(s)	576, 1665
MflI	RGATCY	5 cut(s)	228, 458, 751, 1168, 2119
MhlI	GDGCHC	2 cut(s)	772, 2136
MlyI	GAGTC	3 cut(s)	32, 197, 1076
MmeI	TCCRAC	3 cut(s)	684, 1009, 1989
Mph1103I	ATGCAT	3 cut(s)	389, 796, 2017
MroNI	GCCGGC	1 cut(s)	2149
MroXI	GAANNNNTTC	2 cut(s)	1198, 1339
MseI	TTAA	5 cut(s)	324, 1493, 1869, 2031, 2039
MspA1I	CMGCKG	2 cut(s)	1961, 2201
MspI	CCGG	9 cut(s)	35, 46, 98, 122, 226, 989, 1932, 1998, 2150
MspR9I	CCNGG	8 cut(s)	122, 172, 453, 463, 1370, 1932, 1933, 1999
MunI	CAATTG	2 cut(s)	576, 1665
Mva1269I	GAATGC	1 cut(s)	472
MvaI	CCWGG	4 cut(s)	172, 453, 463, 1370
MwoI	GCNNNNNNNGC	7 cut(s)	122, 854, 1454, 1762, 1914, 1923, 2042
NaeI	GCCGGC	1 cut(s)	2151
NciI	CCSGG	4 cut(s)	122, 1932, 1933, 1999
NgoMIV	GCCGGC	1 cut(s)	2149
NlaIV	GGNNCC	5 cut(s)	80, 181, 373, 813, 2121
NmeAIII	GCCGAG	1 cut(s)	222
NmuCI	GTSAC	2 cut(s)	654, 1450
NsbI	TGCGCA	1 cut(s)	1731
NsiI	ATGCAT	3 cut(s)	389, 796, 2017
NspI	RCATGY	1 cut(s)	2233
PaeR7I	CTCGAG	1 cut(s)	40
PagI	TCATGA	2 cut(s)	1255, 1687
PaqCI	CACCTGC	1 cut(s)	415
PctI	GAATGC	1 cut(s)	472
PdiI	GCCGGC	1 cut(s)	2151
PdmI	GAANNNNTTC	2 cut(s)	1198, 1339
PflFI	GACNNNGTC	1 cut(s)	68
PflMI	CCANNNNNTGG	1 cut(s)	1400
PfoI	TCCNGGA	1 cut(s)	461
PinAI	ACCGGT	1 cut(s)	988
PleI	GAGTC	3 cut(s)	32, 197, 1075
PpsI	GAGTC	3 cut(s)	32, 197, 1075
PpuMI	RGGWCCY	2 cut(s)	79, 812
PshAI	GACNNNNGTC	1 cut(s)	263
PshBI	ATTAAT	1 cut(s)	1869
PsiI	TTATAA	1 cut(s)	903
Psp124BI	GAGCTC	1 cut(s)	772
Psp5II	RGGWCCY	2 cut(s)	79, 812
Psp6I	CCWGG	4 cut(s)	170, 451, 461, 1368
PspGI	CCWGG	4 cut(s)	170, 451, 461, 1368
PspN4I	GGNNCC	5 cut(s)	80, 181, 373, 813, 2121
PspPI	GGNCC	7 cut(s)	48, 79, 124, 812, 1132, 1604, 1763
PspPPI	RGGWCCY	2 cut(s)	79, 812
PspXI	VCTCGAGB	1 cut(s)	40
PstI	CTGCAG	2 cut(s)	810, 2206
PstNI	CAGNNNCTG	1 cut(s)	1454
PsuI	RGATCY	5 cut(s)	228, 458, 751, 1168, 2119
PsyI	GACNNNGTC	1 cut(s)	68
PvuII	CAGCTG	2 cut(s)	1961, 2201
RsaI	GTAC	3 cut(s)	1120, 1363, 1847
RsaNI	GTAC	3 cut(s)	1119, 1362, 1846
Rsr2I	CGGWCCG	1 cut(s)	48
RsrII	CGGWCCG	1 cut(s)	48
SacI	GAGCTC	1 cut(s)	772
SaqAI	TTAA	5 cut(s)	324, 1493, 1869, 2031, 2039
Sau96I	GGNCC	7 cut(s)	48, 79, 124, 812, 1132, 1604, 1763
ScaI	AGTACT	3 cut(s)	1120, 1363, 1847
SchI	GAGTC	3 cut(s)	32, 197, 1076
ScrFI	CCNGG	8 cut(s)	122, 172, 453, 463, 1370, 1932, 1933, 1999
SduI	GDGCHC	2 cut(s)	772, 2136
SexAI	ACCWGGT	1 cut(s)	451
SfcI	CTRYAG	3 cut(s)	437, 806, 2202
Sfr274I	CTCGAG	1 cut(s)	40
SinI	GGWCC	4 cut(s)	48, 79, 812, 1604
SlaI	CTCGAG	1 cut(s)	40
SmaI	CCCGGG	1 cut(s)	1933
SmlI	CTYRAG	3 cut(s)	40, 1461, 1751
SmoI	CTYRAG	3 cut(s)	40, 1461, 1751
SspI	AATATT	1 cut(s)	1042
SspMI	CTAG	2 cut(s)	1478, 1598
SstI	GAGCTC	1 cut(s)	772
StyD4I	CCNGG	8 cut(s)	120, 170, 451, 461, 1368, 1930, 1931, 1997
StyI	CCWWGG	1 cut(s)	1597
TaaI	ACNGT	4 cut(s)	524, 1093, 1313, 2029
TaqI	TCGA	7 cut(s)	15, 41, 72, 611, 883, 1675, 1785
TatI	WGTACW	3 cut(s)	1118, 1361, 1845
TauI	GCSGC	5 cut(s)	154, 275, 1768, 2159, 2185
Tru1I	TTAA	5 cut(s)	324, 1493, 1869, 2031, 2039
Tru9I	TTAA	5 cut(s)	324, 1493, 1869, 2031, 2039
TscAI	CASTG	5 cut(s)	492, 810, 1318, 1459, 1884
TseFI	GTSAC	2 cut(s)	654, 1450
TseI	GCWGC	5 cut(s)	116, 2153, 2201, 2204, 2219
Tsp45I	GTSAC	2 cut(s)	654, 1450
TspGWI	ACGGA	5 cut(s)	192, 223, 253, 1538, 2076
TspMI	CCCGGG	1 cut(s)	1931
TspRI	CASTG	5 cut(s)	492, 810, 1318, 1459, 1884
Tth111I	GACNNNGTC	1 cut(s)	68
Van91I	CCANNNNNTGG	1 cut(s)	1400
VpaK11BI	GGWCC	4 cut(s)	48, 79, 812, 1604
VspI	ATTAAT	1 cut(s)	1869
XapI	RAATTY	2 cut(s)	1376, 1639
XceI	RCATGY	1 cut(s)	2233
XhoI	CTCGAG	1 cut(s)	40
XmaI	CCCGGG	1 cut(s)	1931
XmaJI	CCTAGG	1 cut(s)	1597
XmnI	GAANNNNTTC	2 cut(s)	1198, 1339
XspI	CTAG	2 cut(s)	1478, 1598
ZrmI	AGTACT	3 cut(s)	1120, 1363, 1847
Zsp2I	ATGCAT	3 cut(s)	389, 796, 2017

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.