FvH4_7g25390

cation H( ) antiporter 15-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
19401875 .. 19404927
3053 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g25390.t1

Sequence Viewer

Length: 2469 bp
ATGTCTTCACATTCCCATGTCGCGGAAATCCGGCATGCGATAGATAATGTAACATTGGTGTGTCAGGATCCTCACAACACCGTCAACGTCAGGGGTTTTTGGAGCGGCAAAAACCCCCTGGACTCCTCCACTTCTCTTCTTCTGGTGCAGTTATCAATCATCACATTTGTTTCTACCTTCGTCAATCTTTGGCTTCGACAAATAGGACAATCCAGCGTTGTTTCTAACATTTTTAGTGGTATACTATTCGGTCCATCTGCCCTGGGACATTTCAAGCAACTCGCCGAAACCCTTTTCCCTCTAGAAGGCATCATTGTGCTCGAAACACTTGCAACATGGGGACTCACGTACTTCCTGTTTTCGATAGGAGTGAAGATGGATGCCGGATCAATGATACGTCCCCAACGGAAATGCATGGTCATCGGATCATCATTGTTCTTTTGTACATTGTTACTCCCTCAGGGACTAACCTTCCTCTTGATACGTTTGGTCCCTAAAATGGACACGACGCTTCAGAAAGCACTACCATTCATATCTGCTACGCAGGCTATATCAAGTTCAGCTGTGGTTGGTTCTCTACTTACCGAGCTCAAGCTGCTGAACACTGACATCGGCCGCACGGCGGTCTCAACGGCACTGTTTTGTGATGTTATTGGCATAATAATGAGTGCGTTTGCTATTGCAATGAGTGATAGGAAGAACAAAGGTACAATAATACCATGGTTGGCAGTGATACAAGCAGCTGCTCTTGTGCTTGGCATTATCTATATCTGCAGGCCATTCATGATGTGGATGCGAAACCGGGCAGAGGAAAAAAATGTTGTCAGGGAGTCGCATATTTTCATCATCTTCGTTCTTGTGCTTGTGTTTGGATTTCTTAGTGAGATCTCAAGCCAGCATTACTTATTGGGGCCGCTGGTGTTTGGCTTTGTAGTACCTTCCGGACCGCCTCTAGGCTCGGCTGTGGTGGCCAGGGTGGATACTCTTGCTACAGGACTGTTCTATCCAACATACCTTGCCGTCACTGGGCTGAAAACAAACATCTTTACAATCGATTTTCGGTCTTATATGGTTCTGGGGGCAATTTTTTTCTTTGCTAGTTGTGTTAAGGTTGGAACAGTAATGTTGGCAGCCTGCTATTATGAACAGACTTTGCGTGAAGCTTTCGTGCTCGGGCTTATTCTCAATGCAAAAGGGATCACTGAGCTTGTGATGTACAATATTTGGAAGCAAACCAAGTTGCTGAGCGATCAAGAATTTGCGCTAGCTGTGGTCATGGTAGTAGCGGTAACAGCTTGTCTAACACCCTTGATAAAACTTCTCTATGATCCCTCACAGCAATTCTCAGCTACCAAAAGAAGTACAATCCAGCATTTGAAGCGCGAGACAGAGTTCCGAATCATGGCCTGCATCCATACCCAGGAGAACGTTCCCACAGTGATAAACATTTTAGAAGTATCAAATTCTACAGAAGAGAACCCTGTTGCAGTTATAGCCCTCATCCTCGTCGAGCTTGTGGGACGAAGCACCCCTGTTCTCGTAGCACACCACCCCGGGGACACAATAGAAAGCAGCATCGGCAGCAGCACATCAAAGTCCAACCAAATTATCAAAGCCTTGGGGCAGTATACTGAGTGCAATGAAGGGCGCGCCACCCTCCAACCATTCACTTCCATCTCACATTATCAGACAATGCATGATGACATTATGAGGGTAGCATTTGAGAAGAGGGCACACATTGTGATCCTGCCGTTTCACAAGACTTATGCTATAGATGGCACCATTGGATCAGTAAACAGAGCGCACCAGTCCCTGAACCTCAGCGTACTTGAAAAGGCTCCTTGCTCTGTTGGAATCCTCATTGATCGTGGGATCCTTGGTGGTTCAATGTCAGTTCTCACCAGCCAGTATATATACCATGTTGCTGTGATCTTCTTAGGTGGTGTAGACGATGCAGAGGCACTGGCCTATGGCTCTCGCATGGCGAGTCATCCAAATGTGGACTTAACAGTTGCACGGTTTCTTCTCTTTGGAGAAGAAAACTGTAAAGAGAGAAAGCGGGATACCGACTTACTTGAAGAATACCGACGAGCTCATGTCGGAAATGAGCGGTTTGTTGTGGCGGAAGAAGTGGTAAAAGATGGAGCGAAGCTGTCTTCTGTTATTAGATCAATGGTAGATTGCTTTGATTTGATGTTGGTGGGCATGCATCATCAGGACACTCCCCTTCTTTCGGGGCTTGGTGAGTGGAGTGAGTGCCCAGAGCTTGGTATCATCGGCGATATGCTTGCTTCACCGGATTTTCGTTGCTCACTTTCAGTACTAGTGGTGCAACAACAAAGAATAGCAGGAAAACCAATTAGTCGGACTGCAAAACCAGTTGATAAAGAACCACTAATTCATGATGTCCCAGATGAACAAGTAAGATCATCATGGACGATTACAGTGAATGAAGGAAATAGGGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

823

Amino Acids

90.39

Weight (kDa)

6.63

Isoelectric Point (pI)

45.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_H_Exchanger PF00999 56 - 438 1.6e-39 Sodium/hydrogen exchanger, transmembrane
CHX17_2nd PF23256 497 - 630 7.9e-18 Plant cation/H(+) antiporter domain
CHX17_C PF23259 640 - 780 6.7e-17 Plant cation/H(+) antiporter, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013717)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1778
AccB7I CCANNNNNTGG 1 cut(s) 2267
AccBSI CCGCTC 2 cut(s) 105, 2110
AccI GTMKAC 3 cut(s) 241, 1628, 1947
AccII CGCG 3 cut(s) 23, 1383, 1650
AccIII TCCGGA 1 cut(s) 941
AclI AACGTT 1 cut(s) 1428
AcoI YGGCCR 2 cut(s) 613, 969
AcsI RAATTY 2 cut(s) 1256, 1462
AcuI CTGAAG 1 cut(s) 497
AdeI CACNNNGTG 1 cut(s) 1741
AfaI GTAC 8 cut(s) 350, 445, 709, 936, 1217, 1363, 1827, 2322
AgsI TTSAA 5 cut(s) 274, 1378, 1832, 1887, 2078
AhlI ACTAGT 1 cut(s) 2323
AjnI CCWGG 4 cut(s) 117, 261, 971, 1419
Alw21I GWGCWC 4 cut(s) 321, 591, 1173, 2095
Alw26I GTCTC 2 cut(s) 631, 1379
AlwNI CAGNNNCTG 1 cut(s) 1813
Ama87I CYCGRG 2 cut(s) 1172, 1553
Aor13HI TCCGGA 1 cut(s) 941
AoxI GGCC 6 cut(s) 613, 776, 911, 969, 1404, 1965
ApeKI GCWGC 7 cut(s) 595, 740, 743, 1130, 1572, 1581, 1584
ApoI RAATTY 2 cut(s) 1256, 1462
AscI GGCGCGCC 1 cut(s) 1648
AspLEI GCGC 5 cut(s) 1264, 1383, 1650, 1652, 1804
AspS9I GGNCC 4 cut(s) 251, 490, 911, 944
AsuC2I CCSGG 3 cut(s) 803, 1554, 1555
AsuHPI GGTGA 3 cut(s) 1891, 2255, 2286
AsuNHI GCTAGC 1 cut(s) 1264
AvaI CYCGRG 2 cut(s) 1172, 1553
AvaII GGWCC 3 cut(s) 251, 490, 944
AxyI CCTNAGG 1 cut(s) 459
BaeGI GKGCMC 2 cut(s) 1735, 2261
BalI TGGCCA 1 cut(s) 971
BamHI GGATCC 2 cut(s) 67, 1872
BanI GGYRCC 1 cut(s) 1778
BanII GRGCYC 2 cut(s) 591, 2095
BbsI GAAGAC 1 cut(s) 2148
Bbv12I GWGCWC 4 cut(s) 321, 591, 1173, 2095
BbvCI CCTCAGC 1 cut(s) 1820
BbvI GCAGC 7 cut(s) 582, 730, 752, 1142, 1584, 1593, 1596
BccI CCATC 5 cut(s) 262, 370, 1682, 1769, 2135
BceAI ACGGC 4 cut(s) 636, 648, 1004, 1735
BcgI CGANNNNNNTGC 6 cut(s) 311, 345, 403, 437, 2270, 2304
BciT130I CCWGG 4 cut(s) 119, 263, 973, 1421
BciVI GTATCC 2 cut(s) 973, 2056
BcnI CCSGG 3 cut(s) 803, 1554, 1555
BcoDI GTCTC 2 cut(s) 631, 1379
BcuI ACTAGT 1 cut(s) 2323
BfaI CTAG 5 cut(s) 302, 953, 1098, 1265, 2324
BfmI CTRYAG 4 cut(s) 772, 990, 1467, 1770
BfuI GTATCC 2 cut(s) 973, 2056
BglII AGATCT 1 cut(s) 885
BlpI GCTNAGC 1 cut(s) 1244
BmcAI AGTACT 1 cut(s) 2322
Bme1390I CCNGG 7 cut(s) 119, 263, 803, 973, 1421, 1554, 1555
Bme18I GGWCC 3 cut(s) 251, 490, 944
BmeT110I CYCGRG 2 cut(s) 1172, 1553
BmgT120I GGNCC 4 cut(s) 251, 490, 911, 944
BmiI GGNNCC 6 cut(s) 69, 492, 912, 1780, 1839, 1874
BmrFI CCNGG 7 cut(s) 119, 263, 803, 973, 1421, 1554, 1555
BmrI ACTGGG 1 cut(s) 1035
BmsI GCATC 7 cut(s) 318, 370, 783, 1419, 1584, 1942, 2218
BmtI GCTAGC 1 cut(s) 1268
BmuI ACTGGG 1 cut(s) 1035
BpiI GAAGAC 1 cut(s) 2148
Bpu10I CCTNAGC 1 cut(s) 1820
Bpu1102I GCTNAGC 1 cut(s) 1244
BpuEI CTTGAG 2 cut(s) 575, 874
BpuMI CCSGG 3 cut(s) 803, 1554, 1555
Bsa29I ATCGAT 1 cut(s) 1053
BsaAI YACGTR 1 cut(s) 348
BsaI GGTCTC 1 cut(s) 631
BsaWI WCCGGW 2 cut(s) 941, 2296
Bse1I ACTGG 5 cut(s) 1030, 1807, 1906, 1968, 2378
Bse21I CCTNAGG 1 cut(s) 459
Bse3DI GCAATG 2 cut(s) 690, 1645
BseAI TCCGGA 1 cut(s) 941
BseBI CCWGG 4 cut(s) 119, 263, 973, 1421
BseCI ATCGAT 1 cut(s) 1053
BseGI GGATG 5 cut(s) 385, 798, 1410, 1500, 1990
BseMI GCAATG 2 cut(s) 690, 1645
BseMII CTCAG 6 cut(s) 473, 1194, 1235, 1359, 1623, 1834
BseNI ACTGG 5 cut(s) 1030, 1807, 1906, 1968, 2378
BsePI GCGCGC 1 cut(s) 1648
BseRI GAGGAG 1 cut(s) 115
BseSI GKGCMC 2 cut(s) 1735, 2261
BseX3I CGGCCG 1 cut(s) 613
BseXI GCAGC 7 cut(s) 582, 730, 752, 1142, 1584, 1593, 1596
BsgI GTGCAG 1 cut(s) 167
Bsh1236I CGCG 3 cut(s) 23, 1383, 1650
Bsh1285I CGRYCG 1 cut(s) 616
BshFI GGCC 6 cut(s) 615, 778, 913, 971, 1406, 1967
BshNI GGYRCC 1 cut(s) 1778
BshVI ATCGAT 1 cut(s) 1053
BsiEI CGRYCG 1 cut(s) 616
BsiHKAI GWGCWC 4 cut(s) 321, 591, 1173, 2095
BsiHKCI CYCGRG 2 cut(s) 1172, 1553
BsiSI CCGG 6 cut(s) 31, 384, 802, 942, 1554, 2297
BslFI GGGAC 9 cut(s) 279, 354, 384, 476, 477, 1533, 1571, 1795, 2393
BsmAI GTCTC 2 cut(s) 631, 1379
BsmFI GGGAC 9 cut(s) 279, 354, 384, 476, 477, 1533, 1571, 1795, 2393
BsnI GGCC 6 cut(s) 615, 778, 913, 971, 1406, 1967
Bso31I GGTCTC 1 cut(s) 631
BsoBI CYCGRG 2 cut(s) 1172, 1553
Bsp1286I GDGCHC 6 cut(s) 321, 591, 1173, 1735, 2095, 2261
Bsp13I TCCGGA 1 cut(s) 941
Bsp1407I TGTACA 2 cut(s) 443, 1215
Bsp1720I GCTNAGC 1 cut(s) 1244
Bsp19I CCATGG 1 cut(s) 719
BspANI GGCC 6 cut(s) 615, 778, 913, 971, 1406, 1967
BspCNI CTCAG 6 cut(s) 472, 1195, 1236, 1358, 1624, 1833
BspDI ATCGAT 1 cut(s) 1053
BspEI TCCGGA 1 cut(s) 941
BspFNI CGCG 3 cut(s) 23, 1383, 1650
BspHI TCATGA 2 cut(s) 783, 2401
BspLI GGNNCC 6 cut(s) 69, 492, 912, 1780, 1839, 1874
BspMAI CTGCAG 1 cut(s) 776
BspOI GCTAGC 1 cut(s) 1268
BspT107I GGYRCC 1 cut(s) 1778
BspTNI GGTCTC 1 cut(s) 631
BsrBI CCGCTC 2 cut(s) 105, 2110
BsrDI GCAATG 2 cut(s) 690, 1645
BsrGI TGTACA 2 cut(s) 443, 1215
BsrI ACTGG 5 cut(s) 1030, 1807, 1906, 1968, 2378
BssHII GCGCGC 1 cut(s) 1648
BssNAI GTATAC 2 cut(s) 242, 1629
BssT1I CCWWGG 3 cut(s) 719, 1617, 1876
Bst1107I GTATAC 2 cut(s) 242, 1629
Bst2UI CCWGG 4 cut(s) 119, 263, 973, 1421
Bst4CI ACNGT 9 cut(s) 82, 639, 999, 1120, 1438, 2011, 2019, 2045, 2446
Bst6I CTCTTC 3 cut(s) 141, 1467, 1721
BstAUI TGTACA 2 cut(s) 443, 1215
BstBAI YACGTR 1 cut(s) 348
BstDEI CTNAG 8 cut(s) 459, 878, 1203, 1244, 1345, 1632, 1820, 1936
BstDSI CCRYGG 1 cut(s) 719
BstENI CCTNNNNNAGG 1 cut(s) 303
BstF5I GGATG 5 cut(s) 385, 798, 1410, 1500, 1990
BstFNI CGCG 3 cut(s) 23, 1383, 1650
BstHHI GCGC 5 cut(s) 1264, 1383, 1650, 1652, 1804
BstMAI GTCTC 2 cut(s) 631, 1379
BstMCI CGRYCG 1 cut(s) 616
BstMWI GCNNNNNNNGC 8 cut(s) 545, 595, 968, 1292, 1378, 1493, 1578, 1581
BstNI CCWGG 4 cut(s) 119, 263, 973, 1421
BstNSI RCATGY 2 cut(s) 38, 2209
BstSCI CCNGG 7 cut(s) 117, 261, 801, 971, 1419, 1552, 1553
BstSFI CTRYAG 4 cut(s) 772, 990, 1467, 1770
BstSLI GKGCMC 2 cut(s) 1735, 2261
BstUI CGCG 3 cut(s) 23, 1383, 1650
BstV1I GCAGC 7 cut(s) 582, 730, 752, 1142, 1584, 1593, 1596
BstV2I GAAGAC 1 cut(s) 2148
BstX2I RGATCY 3 cut(s) 67, 885, 1872
BstYI RGATCY 3 cut(s) 67, 885, 1872
BstZ17I GTATAC 2 cut(s) 242, 1629
BstZI CGGCCG 1 cut(s) 613
Bsu15I ATCGAT 1 cut(s) 1053
Bsu36I CCTNAGG 1 cut(s) 459
BsuI GTATCC 2 cut(s) 973, 2056
BsuRI GGCC 6 cut(s) 615, 778, 913, 971, 1406, 1967
BsuTUI ATCGAT 1 cut(s) 1053
BtgI CCRYGG 1 cut(s) 719
BtsCI GGATG 5 cut(s) 385, 798, 1410, 1500, 1990
BtsI GCAGTG 1 cut(s) 735
BtsIMutI CAGTG 8 cut(s) 603, 635, 735, 1023, 1200, 1443, 1961, 2451
CaiI CAGNNNCTG 1 cut(s) 1813
CciI TCATGA 2 cut(s) 783, 2401
CfoI GCGC 5 cut(s) 1264, 1383, 1650, 1652, 1804
Cfr13I GGNCC 4 cut(s) 251, 490, 911, 944
Cfr9I CCCGGG 1 cut(s) 1553
ClaI ATCGAT 1 cut(s) 1053
CpoI CGGWCCG 1 cut(s) 944
CseI GACGC 1 cut(s) 517
Csp6I GTAC 8 cut(s) 349, 444, 708, 935, 1216, 1362, 1826, 2321
CspI CGGWCCG 1 cut(s) 944
CviQI GTAC 8 cut(s) 349, 444, 708, 935, 1216, 1362, 1826, 2321
DdeI CTNAG 8 cut(s) 459, 878, 1203, 1244, 1345, 1632, 1820, 1936
DraIII CACNNNGTG 1 cut(s) 1741
EaeI YGGCCR 2 cut(s) 613, 969
EagI CGGCCG 1 cut(s) 613
Eam1104I CTCTTC 3 cut(s) 141, 1467, 1721
EarI CTCTTC 3 cut(s) 141, 1467, 1721
EciI GGCGGA 1 cut(s) 2138
Ecl136II GAGCTC 2 cut(s) 589, 2093
EclXI CGGCCG 1 cut(s) 613
Eco130I CCWWGG 3 cut(s) 719, 1617, 1876
Eco24I GRGCYC 2 cut(s) 591, 2095
Eco31I GGTCTC 1 cut(s) 631
Eco47I GGWCC 3 cut(s) 251, 490, 944
Eco52I CGGCCG 1 cut(s) 613
Eco53kI GAGCTC 2 cut(s) 589, 2093
Eco57I CTGAAG 1 cut(s) 497
Eco81I CCTNAGG 1 cut(s) 459
Eco88I CYCGRG 2 cut(s) 1172, 1553
EcoICRI GAGCTC 2 cut(s) 589, 2093
EcoNI CCTNNNNNAGG 1 cut(s) 303
EcoRII CCWGG 4 cut(s) 117, 261, 971, 1419
EcoT14I CCWWGG 3 cut(s) 719, 1617, 1876
EcoT22I ATGCAT 3 cut(s) 416, 1698, 2211
EcoT38I GRGCYC 2 cut(s) 591, 2095
ErhI CCWWGG 3 cut(s) 719, 1617, 1876
FaqI GGGAC 9 cut(s) 279, 354, 384, 476, 477, 1533, 1571, 1795, 2393
FauI CCCGC 1 cut(s) 2052
FblI GTMKAC 3 cut(s) 241, 1628, 1947
FokI GGATG 5 cut(s) 392, 805, 1397, 1487, 1977
FriOI GRGCYC 2 cut(s) 591, 2095
FspBI CTAG 5 cut(s) 302, 953, 1098, 1265, 2324
GlaI GCGC 5 cut(s) 1263, 1382, 1649, 1651, 1803
HaeIII GGCC 6 cut(s) 615, 778, 913, 971, 1406, 1967
HapII CCGG 6 cut(s) 31, 384, 802, 942, 1554, 2297
HgaI GACGC 1 cut(s) 517
HhaI GCGC 5 cut(s) 1264, 1383, 1650, 1652, 1804
Hin6I GCGC 5 cut(s) 1262, 1381, 1648, 1650, 1802
HinP1I GCGC 5 cut(s) 1262, 1381, 1648, 1650, 1802
HincII GTYRAC 1 cut(s) 85
HindII GTYRAC 1 cut(s) 85
HindIII AAGCTT 1 cut(s) 1161
HinfI GANTC 6 cut(s) 122, 342, 830, 1398, 1854, 1987
HpaII CCGG 6 cut(s) 31, 384, 802, 942, 1554, 2297
HphI GGTGA 3 cut(s) 1891, 2255, 2286
Hpy166II GTNNAC 6 cut(s) 85, 242, 1629, 1795, 1948, 2002
Hpy188I TCNGA 6 cut(s) 425, 516, 1397, 1689, 2102, 2367
Hpy188III TCNNGA 8 cut(s) 65, 302, 478, 784, 942, 1253, 2216, 2402
Hpy8I GTNNAC 6 cut(s) 85, 242, 1629, 1795, 1948, 2002
Hpy99I CGWCG 3 cut(s) 511, 1511, 2091
HpyAV CCTTC 7 cut(s) 187, 299, 481, 948, 1637, 2237, 2447
HpyCH4III ACNGT 9 cut(s) 82, 639, 999, 1120, 1438, 2011, 2019, 2045, 2446
HpyCH4IV ACGT 5 cut(s) 87, 347, 397, 484, 1428
HpyF10VI GCNNNNNNNGC 8 cut(s) 545, 595, 968, 1292, 1378, 1493, 1578, 1581
HpyF3I CTNAG 8 cut(s) 459, 878, 1203, 1244, 1345, 1632, 1820, 1936
HpySE526I ACGT 5 cut(s) 87, 347, 397, 484, 1428
HspAI GCGC 5 cut(s) 1262, 1381, 1648, 1650, 1802
Kpn2I TCCGGA 1 cut(s) 941
LmnI GCTCC 3 cut(s) 102, 1843, 2144
Lsp1109I GCAGC 7 cut(s) 582, 730, 752, 1142, 1584, 1593, 1596
LweI GCATC 7 cut(s) 318, 370, 783, 1419, 1584, 1942, 2218
MaeI CTAG 5 cut(s) 302, 953, 1098, 1265, 2324
MaeII ACGT 5 cut(s) 87, 347, 397, 484, 1428
MaeIII GTNAC 4 cut(s) 49, 450, 1021, 1288
MbiI CCGCTC 2 cut(s) 105, 2110
MflI RGATCY 3 cut(s) 67, 885, 1872
MhlI GDGCHC 6 cut(s) 321, 591, 1173, 1735, 2095, 2261
MlsI TGGCCA 1 cut(s) 971
MluCI AATT 7 cut(s) 1083, 1256, 1340, 1462, 1605, 2358, 2397
MluNI TGGCCA 1 cut(s) 971
MlyI GAGTC 4 cut(s) 116, 336, 839, 1996
MmeI TCCRAC 7 cut(s) 1031, 1093, 1623, 1684, 1831, 2080, 2345
Mox20I TGGCCA 1 cut(s) 971
Mph1103I ATGCAT 3 cut(s) 416, 1698, 2211
MroI TCCGGA 1 cut(s) 941
MscI TGGCCA 1 cut(s) 971
MseI TTAA 2 cut(s) 1107, 2006
MslI CAYNNNNRTG 5 cut(s) 15, 58, 314, 662, 1995
Msp20I TGGCCA 1 cut(s) 971
MspA1I CMGCKG 3 cut(s) 563, 743, 916
MspI CCGG 6 cut(s) 31, 384, 802, 942, 1554, 2297
MspR9I CCNGG 7 cut(s) 119, 263, 803, 973, 1421, 1554, 1555
MvaI CCWGG 4 cut(s) 119, 263, 973, 1421
MvnI CGCG 3 cut(s) 23, 1383, 1650
MwoI GCNNNNNNNGC 8 cut(s) 545, 595, 968, 1292, 1378, 1493, 1578, 1581
NciI CCSGG 3 cut(s) 803, 1554, 1555
NcoI CCATGG 1 cut(s) 719
NheI GCTAGC 1 cut(s) 1264
NlaIV GGNNCC 6 cut(s) 69, 492, 912, 1780, 1839, 1874
NmeAIII GCCGAG 1 cut(s) 938
NmuCI GTSAC 1 cut(s) 1021
NsiI ATGCAT 3 cut(s) 416, 1698, 2211
NspI RCATGY 2 cut(s) 38, 2209
PaeI GCATGC 2 cut(s) 38, 2209
PagI TCATGA 2 cut(s) 783, 2401
PalAI GGCGCGCC 1 cut(s) 1648
PasI CCCWGGG 1 cut(s) 262
PauI GCGCGC 1 cut(s) 1648
PfeI GAWTC 2 cut(s) 1398, 1854
PflMI CCANNNNNTGG 1 cut(s) 2267
PleI GAGTC 4 cut(s) 116, 336, 838, 1995
PpsI GAGTC 4 cut(s) 116, 336, 838, 1995
Ppu21I YACGTR 1 cut(s) 348
Psp124BI GAGCTC 2 cut(s) 591, 2095
Psp1406I AACGTT 1 cut(s) 1428
Psp6I CCWGG 4 cut(s) 117, 261, 971, 1419
PspGI CCWGG 4 cut(s) 117, 261, 971, 1419
PspN4I GGNNCC 6 cut(s) 69, 492, 912, 1780, 1839, 1874
PspPI GGNCC 4 cut(s) 251, 490, 911, 944
PstI CTGCAG 1 cut(s) 776
PstNI CAGNNNCTG 1 cut(s) 1813
PsuI RGATCY 3 cut(s) 67, 885, 1872
PteI GCGCGC 1 cut(s) 1648
PvuII CAGCTG 2 cut(s) 563, 743
RsaI GTAC 8 cut(s) 350, 445, 709, 936, 1217, 1363, 1827, 2322
RsaNI GTAC 8 cut(s) 349, 444, 708, 935, 1216, 1362, 1826, 2321
RseI CAYNNNNRTG 5 cut(s) 15, 58, 314, 662, 1995
Rsr2I CGGWCCG 1 cut(s) 944
RsrII CGGWCCG 1 cut(s) 944
SacI GAGCTC 2 cut(s) 591, 2095
SaqAI TTAA 2 cut(s) 1107, 2006
Sau96I GGNCC 4 cut(s) 251, 490, 911, 944
ScaI AGTACT 1 cut(s) 2322
SchI GAGTC 4 cut(s) 116, 336, 839, 1996
ScrFI CCNGG 7 cut(s) 119, 263, 803, 973, 1421, 1554, 1555
SduI GDGCHC 6 cut(s) 321, 591, 1173, 1735, 2095, 2261
SfaNI GCATC 7 cut(s) 318, 370, 783, 1419, 1584, 1942, 2218
SfcI CTRYAG 4 cut(s) 772, 990, 1467, 1770
SgsI GGCGCGCC 1 cut(s) 1648
SinI GGWCC 3 cut(s) 251, 490, 944
SmaI CCCGGG 1 cut(s) 1555
SmiMI CAYNNNNRTG 5 cut(s) 15, 58, 314, 662, 1995
SmlI CTYRAG 2 cut(s) 590, 889
SmoI CTYRAG 2 cut(s) 590, 889
SpeI ACTAGT 1 cut(s) 2323
SphI GCATGC 2 cut(s) 38, 2209
Sse9I AATT 7 cut(s) 1083, 1256, 1340, 1462, 1605, 2358, 2397
SspI AATATT 1 cut(s) 1222
SspMI CTAG 5 cut(s) 302, 953, 1098, 1265, 2324
SstI GAGCTC 2 cut(s) 591, 2095
StyD4I CCNGG 7 cut(s) 117, 261, 801, 971, 1419, 1552, 1553
StyI CCWWGG 3 cut(s) 719, 1617, 1876
TaaI ACNGT 9 cut(s) 82, 639, 999, 1120, 1438, 2011, 2019, 2045, 2446
TaiI ACGT 5 cut(s) 90, 350, 400, 487, 1431
TaqI TCGA 5 cut(s) 196, 321, 362, 1053, 1509
TaqII GACCGA 2 cut(s) 239, 1050
TasI AATT 7 cut(s) 1083, 1256, 1340, 1462, 1605, 2358, 2397
TatI WGTACW 4 cut(s) 443, 1215, 1361, 2320
TauI GCSGC 3 cut(s) 108, 618, 916
TfiI GAWTC 2 cut(s) 1398, 1854
Tru1I TTAA 2 cut(s) 1107, 2006
Tru9I TTAA 2 cut(s) 1107, 2006
TscAI CASTG 8 cut(s) 610, 642, 735, 1030, 1207, 1443, 1968, 2451
TseFI GTSAC 1 cut(s) 1021
TseI GCWGC 7 cut(s) 595, 740, 743, 1130, 1572, 1581, 1584
Tsp45I GTSAC 1 cut(s) 1021
TspDTI ATGAA 8 cut(s) 520, 772, 832, 1158, 1656, 2390, 2430, 2466
TspGWI ACGGA 1 cut(s) 421
TspMI CCCGGG 1 cut(s) 1553
TspRI CASTG 8 cut(s) 610, 642, 735, 1030, 1207, 1443, 1968, 2451
Van91I CCANNNNNTGG 1 cut(s) 2267
VpaK11BI GGWCC 3 cut(s) 251, 490, 944
XagI CCTNNNNNAGG 1 cut(s) 303
XapI RAATTY 2 cut(s) 1256, 1462
XbaI TCTAGA 1 cut(s) 301
XceI RCATGY 2 cut(s) 38, 2209
XcmI CCANNNNNNNNNTGG 1 cut(s) 786
XmaI CCCGGG 1 cut(s) 1553
XmiI GTMKAC 3 cut(s) 241, 1628, 1947
XspI CTAG 5 cut(s) 302, 953, 1098, 1265, 2324
ZrmI AGTACT 1 cut(s) 2322
Zsp2I ATGCAT 3 cut(s) 416, 1698, 2211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.