Rh1BG336600

cation H( ) antiporter 15-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0013717
Physical Location & Seq
Reverse (-)
47177070 .. 47180534
3465 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG336600.1

Sequence Viewer

Length: 2094 bp
ATGGATGCTGGAGGAATTGTGCGTCCCCAACGGAAGTGCTTGGCCATTGGAACATCATTGTTCCTTTGCACATTGATACTCCCTGAGGGACTAGCCTTCCTCTTGATACGCTATGTCCCCAAAATGGACAGGTCGCTTCGGAACTCACTCCCCTTCTTATCTGCTACGCAAGCTTTGACAAGCTCCCCTGTTATTGGTTCTCTACTTACCGAGCTCAAGATTTTGAACACTGACATTGGCCGCACGGCGGTCTCAACGGCAATATTTTGTGATGCTGTTGGCATAACAATGAGTGCGATTGCTATTGCAATAAGTGATAGGAGGACCAAAAATACAATAATACCATGGCTCGCAGTACTACAAGCAGCGGCTCTTGTGTTGGTCATTCTCCTTGTGGCCAGGCCAATCATGATGTGGATACGAAACCAGGCACAGGAAAGAAAATCTGTCAGGGAGTCGCATATTTTCATCATTTTCGTTCTTGTGCTTGTGTTTGCATTTCTTAGTGAGATCTCAAGCCAGCATTACGTATTGGGGCCGCTAGCGTTTGGCTTTACAATACCTGCTGGATCGCCTTTAGGCTCAGCTGTGGTGGCCAAGGTGGATACTCTTGCTACGGGACTATTCTACCCAACATACCTTGCCGTCACGGGGCTGAAAACAAACATCTACACGATTGATCCTCGGTCTTCGTGGGTTCTCGGGGTTATTTTTCTCTTCGCTAGCGTGGTCAAGATTGGAGCAGTAATGTTGCCAGCCTGCTATTATGAACAGACTATACGTGAAGCTTTTGTGCTCGGGCTTATTCTCAACGCAAAAGGCATCACTGAGCTTATTATGTTCAACATTTGGAAGCAAACCAAGCTGCTGAGCGATCAAGAATATGCCCTGGCTGTGATCTATGTAGTAGCGATAACAGCTGTTGTGACACCCTTGATAAAAATTCTCTATGATCCCTCAAAGCAATTCTCAGCTACCAAAAGAAGTACAATCCAGCATTTGAAGCGCAAGACAGAGCTCCGAATCATGGCCTGCATCCACTCCCAGGATAACATTCCCACAATGGTAAACGTCCTAGAAGTATCAAATGCAACAGAAGAGAACCCTGTTGCAGTCATTGCCCTCATCCTCGTCGAGCTTGTGGGACGAATCACCCCTGTTCTCATAGCACACCACCCCAATGTCAATCTAAACACCAGCGTTAACAGCAGCACATCCAACTCCAACAAAATTATCAAAGGCTTGAGTCAGTATGCCGAGTACAATGAACGGCGCGCCAGCCTCCAACCATTCACTTCCATCTCACATTATCCAACAATGCACGAAGACATTGTAAGGATAGCATTTGAGAAGAAGGCACACATTGTGATCCTGCCGTTTCACAAGCATTATGCAATAGATGGCACCATTGGGTTAGTGAACAGAGCTCACCAGTCCCTGAACATCAATGTAATTGAAAAGGCACCTTGCTCAGTCGGAATCCTCATTGATCGGGGAATCCTAGGCGGTTCGGTATCAGTTCTTAACAGCCAGTTTATATTCCATGTTGCTGTGATCTTCTTAGGTGGTGTAGACGATGCAGAGGCACTAGCCTATGGCTCTCGCATGGCGAGTCACCCAAATGTGGACTTAACAGTTGCACGGTTTCTTCTCTTTGGAGAAGAAAATTGTAAAGAGAGGAAGCAGGACAGTGACTTGCTTGAAGAATACAGGCGAGCTAATGCAGGAAATGAGCGGTTTGTTGTGGTGGAAGAAGTGGTAAAAGATGGAGCGAAGCTGTCTTCTGTCATCAGCTCAATGGTAGATTGCTTTGATTTGATGTTGGTGGGGATGCATCATCAGGACTCCCCGCTTCTTTCGGGGATTGGTGACTGGAGTGAGTGCCCAGAGCTTGGTATCATTGGCGATATGCTTTCTTCGGCAGATTTTCAGTGCTCACTTTCGGTACTAGTCGTGCAACAACAGAGAATATCAGGAAAACCAATTAGTCGGAATGCAAAACCTGTTGATAAACAACCGCTAATTCATGATGTCCCAGTAGAACAAATGACAGGATCATGGACAATTACAGTGAATGAAAATGATAGGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Na_H_Exchanger

Protein Analysis

697

Amino Acids

76.54

Weight (kDa)

7.97

Isoelectric Point (pI)

47.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_H_Exchanger PF00999 39 - 312 2.1e-30 Sodium/hydrogen exchanger, transmembrane
CHX17_2nd PF23256 372 - 505 4.3e-15 Plant cation/H(+) antiporter domain
CHX17_C PF23259 515 - 655 2e-16 Plant cation/H(+) antiporter, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013717)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g25390
malus_domestica MD01G1160100.v1.1 MD07G1228400.v1.1
prunus_persica Prupe.2G258100_v2.0.a1 Prupe.2G258100_v2.0.a1
pyrus_communis pycom01g17650 pycom07g20680
rosa_chinensis RchiOBHm_Chr1g0371341
rosa_laevigata RLG00000026970
rosa_multiflora Rmu_sc0000809.1_g000038
rosa_roxburghii Rroxscaffold_4G00285780
rosa_rugosa Rorug01G0363200 Rorug01G0363300
rosa_samantha Rh1AG373100 Rh1BG336600 Rh1CG350000 Rh1DG367700
rosa_wichuraiana Rw1G032820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 571
AccB1I GGYRCC 2 cut(s) 1403, 1462
AccB7I CCANNNNNTGG 1 cut(s) 1892
AccBSI CCGCTC 1 cut(s) 1735
AccI GTMKAC 1 cut(s) 1572
AccII CGCG 1 cut(s) 1275
AciI CCGC 8 cut(s) 241, 248, 368, 539, 1506, 1735, 1850, 2018
AclWI GGATC 5 cut(s) 577, 674, 947, 1363, 2062
AcoI YGGCCR 4 cut(s) 42, 238, 396, 594
AcsI RAATTY 1 cut(s) 942
AdeI CACNNNGTG 1 cut(s) 1366
AfaI GTAC 4 cut(s) 357, 988, 1262, 1947
AfiI CCNNNNNNNGG 9 cut(s) 124, 194, 247, 433, 651, 1027, 1045, 1624, 1892
AgsI TTSAA 5 cut(s) 226, 844, 1003, 1457, 1703
AhlI ACTAGT 1 cut(s) 1948
AjnI CCWGG 4 cut(s) 398, 426, 888, 1044
Alw21I GWGCWC 5 cut(s) 216, 798, 1020, 1429, 1937
Alw26I GTCTC 1 cut(s) 256
AlwI GGATC 5 cut(s) 577, 674, 947, 1363, 2062
AlwNI CAGNNNCTG 1 cut(s) 1438
Ama87I CYCGRG 2 cut(s) 701, 797
AoxI GGCC 7 cut(s) 42, 238, 396, 401, 536, 594, 1029
ApeKI GCWGC 3 cut(s) 365, 865, 1209
ApoI RAATTY 1 cut(s) 942
AscI GGCGCGCC 1 cut(s) 1273
AspA2I CCTAGG 1 cut(s) 1501
AspLEI GCGC 3 cut(s) 1008, 1275, 1277
AspS9I GGNCC 2 cut(s) 324, 536
AsuHPI GGTGA 4 cut(s) 1144, 1421, 1607, 1880
AsuNHI GCTAGC 2 cut(s) 541, 722
AvaI CYCGRG 2 cut(s) 701, 797
AvaII GGWCC 1 cut(s) 324
AvrII CCTAGG 1 cut(s) 1501
AxyI CCTNAGG 1 cut(s) 84
BaeGI GKGCMC 1 cut(s) 1886
BalI TGGCCA 3 cut(s) 44, 398, 596
BanI GGYRCC 2 cut(s) 1403, 1462
BanII GRGCYC 3 cut(s) 216, 1020, 1429
BbsI GAAGAC 3 cut(s) 681, 1332, 1773
Bbv12I GWGCWC 5 cut(s) 216, 798, 1020, 1429, 1937
BbvI GCAGC 3 cut(s) 377, 852, 1221
BccI CCATC 3 cut(s) 1307, 1394, 1760
BceAI ACGGC 5 cut(s) 261, 273, 629, 1286, 1360
BciT130I CCWGG 4 cut(s) 400, 428, 890, 1046
BciVI GTATCC 2 cut(s) 411, 598
BcoDI GTCTC 1 cut(s) 256
BcuI ACTAGT 1 cut(s) 1948
BfaI CTAG 7 cut(s) 92, 542, 723, 1076, 1502, 1589, 1949
BfuAI ACCTGC 1 cut(s) 571
BfuI GTATCC 2 cut(s) 411, 598
BglII AGATCT 1 cut(s) 510
BisI GCNGC 6 cut(s) 241, 366, 369, 539, 866, 1210
BlnI CCTAGG 1 cut(s) 1501
BlpI GCTNAGC 2 cut(s) 583, 869
BlsI GCNGC 6 cut(s) 242, 367, 370, 540, 867, 1211
BmcAI AGTACT 1 cut(s) 357
Bme1390I CCNGG 4 cut(s) 400, 428, 890, 1046
Bme18I GGWCC 1 cut(s) 324
BmeT110I CYCGRG 2 cut(s) 701, 797
BmgT120I GGNCC 2 cut(s) 324, 536
BmiI GGNNCC 3 cut(s) 537, 1405, 1464
BmrFI CCNGG 4 cut(s) 400, 428, 890, 1046
BmrI ACTGGG 1 cut(s) 2030
BmsI GCATC 6 cut(s) 262, 831, 1044, 1567, 1821, 1843
BmtI GCTAGC 2 cut(s) 545, 726
BmuI ACTGGG 1 cut(s) 2030
BpiI GAAGAC 3 cut(s) 681, 1332, 1773
BpmI CTGGAG 2 cut(s) 30, 1894
Bpu1102I GCTNAGC 2 cut(s) 583, 869
BpuEI CTTGAG 3 cut(s) 200, 499, 1264
BsaAI YACGTR 2 cut(s) 529, 782
BsaI GGTCTC 1 cut(s) 256
BsaJI CCNNGG 6 cut(s) 344, 597, 683, 888, 1044, 1501
BsaXI ACNNNNNCTCC 1 cut(s) 33
Bsc4I CCNNNNNNNGG 9 cut(s) 124, 194, 247, 433, 651, 1027, 1045, 1624, 1892
Bse1I ACTGG 4 cut(s) 1432, 1531, 1877, 2036
Bse21I CCTNAGG 1 cut(s) 84
Bse3DI GCAATG 1 cut(s) 1116
BseBI CCWGG 4 cut(s) 400, 428, 890, 1046
BseDI CCNNGG 6 cut(s) 344, 597, 683, 888, 1044, 1501
BseGI GGATG 5 cut(s) 10, 1035, 1125, 1214, 1836
BseLI CCNNNNNNNGG 9 cut(s) 124, 194, 247, 433, 651, 1027, 1045, 1624, 1892
BseMI GCAATG 1 cut(s) 1116
BseMII CTCAG 6 cut(s) 75, 597, 819, 860, 984, 1485
BseNI ACTGG 4 cut(s) 1432, 1531, 1877, 2036
BsePI GCGCGC 1 cut(s) 1273
BseSI GKGCMC 1 cut(s) 1886
BseXI GCAGC 3 cut(s) 377, 852, 1221
Bsh1236I CGCG 1 cut(s) 1275
BshFI GGCC 7 cut(s) 44, 240, 398, 403, 538, 596, 1031
BshNI GGYRCC 2 cut(s) 1403, 1462
BsiHKAI GWGCWC 5 cut(s) 216, 798, 1020, 1429, 1937
BsiHKCI CYCGRG 2 cut(s) 701, 797
BslFI GGGAC 7 cut(s) 9, 101, 102, 633, 1158, 1420, 2018
BslI CCNNNNNNNGG 9 cut(s) 124, 194, 247, 433, 651, 1027, 1045, 1624, 1892
BsmAI GTCTC 1 cut(s) 256
BsmFI GGGAC 7 cut(s) 9, 101, 102, 633, 1158, 1420, 2018
BsmI GAATGC 1 cut(s) 1999
BsnI GGCC 7 cut(s) 44, 240, 398, 403, 538, 596, 1031
Bso31I GGTCTC 1 cut(s) 256
BsoBI CYCGRG 2 cut(s) 701, 797
Bsp1286I GDGCHC 6 cut(s) 216, 798, 1020, 1429, 1886, 1937
Bsp1720I GCTNAGC 2 cut(s) 583, 869
Bsp19I CCATGG 1 cut(s) 344
BspACI CCGC 8 cut(s) 241, 248, 368, 539, 1506, 1735, 1850, 2018
BspANI GGCC 7 cut(s) 44, 240, 398, 403, 538, 596, 1031
BspCNI CTCAG 6 cut(s) 76, 596, 820, 861, 983, 1484
BspFNI CGCG 1 cut(s) 1275
BspHI TCATGA 2 cut(s) 408, 2026
BspLI GGNNCC 3 cut(s) 537, 1405, 1464
BspMI ACCTGC 1 cut(s) 571
BspOI GCTAGC 2 cut(s) 545, 726
BspPI GGATC 5 cut(s) 577, 674, 947, 1363, 2062
BspT107I GGYRCC 2 cut(s) 1403, 1462
BspTNI GGTCTC 1 cut(s) 256
BsrBI CCGCTC 1 cut(s) 1735
BsrDI GCAATG 1 cut(s) 1116
BsrI ACTGG 4 cut(s) 1432, 1531, 1877, 2036
BssECI CCNNGG 6 cut(s) 344, 597, 683, 888, 1044, 1501
BssHII GCGCGC 1 cut(s) 1273
BssT1I CCWWGG 3 cut(s) 344, 597, 1501
Bst2UI CCWGG 4 cut(s) 400, 428, 890, 1046
Bst4CI ACNGT 4 cut(s) 1636, 1644, 1691, 2071
Bst6I CTCTTC 2 cut(s) 722, 1092
BstAPI GCANNNNNTGC 1 cut(s) 1118
BstBAI YACGTR 2 cut(s) 529, 782
BstDEI CTNAG 8 cut(s) 84, 503, 583, 828, 869, 970, 1471, 1561
BstDSI CCRYGG 1 cut(s) 344
BstF5I GGATG 5 cut(s) 10, 1035, 1125, 1214, 1836
BstFNI CGCG 1 cut(s) 1275
BstHHI GCGC 3 cut(s) 1008, 1275, 1277
BstMAI GTCTC 1 cut(s) 256
BstMWI GCNNNNNNNGC 7 cut(s) 170, 593, 862, 917, 1003, 1118, 1206
BstNI CCWGG 4 cut(s) 400, 428, 890, 1046
BstSCI CCNGG 4 cut(s) 398, 426, 888, 1044
BstSLI GKGCMC 1 cut(s) 1886
BstSNI TACGTA 1 cut(s) 529
BstUI CGCG 1 cut(s) 1275
BstV1I GCAGC 3 cut(s) 377, 852, 1221
BstV2I GAAGAC 3 cut(s) 681, 1332, 1773
BstX2I RGATCY 1 cut(s) 510
BstYI RGATCY 1 cut(s) 510
Bsu36I CCTNAGG 1 cut(s) 84
BsuI GTATCC 2 cut(s) 411, 598
BsuRI GGCC 7 cut(s) 44, 240, 398, 403, 538, 596, 1031
BtgI CCRYGG 1 cut(s) 344
BtsCI GGATG 5 cut(s) 10, 1035, 1125, 1214, 1836
BtsIMutI CAGTG 5 cut(s) 228, 825, 1696, 1937, 2076
BveI ACCTGC 1 cut(s) 571
CaiI CAGNNNCTG 1 cut(s) 1438
CciI TCATGA 2 cut(s) 408, 2026
CfoI GCGC 3 cut(s) 1008, 1275, 1277
Cfr13I GGNCC 2 cut(s) 324, 536
CseI GACGC 1 cut(s) 11
Csp6I GTAC 4 cut(s) 356, 987, 1261, 1946
CviAII CATG 7 cut(s) 345, 409, 1027, 1544, 1606, 2027, 2058
CviQI GTAC 4 cut(s) 356, 987, 1261, 1946
DdeI CTNAG 8 cut(s) 84, 503, 583, 828, 869, 970, 1471, 1561
DraIII CACNNNGTG 1 cut(s) 1366
EaeI YGGCCR 4 cut(s) 42, 238, 396, 594
Eam1104I CTCTTC 2 cut(s) 722, 1092
EarI CTCTTC 2 cut(s) 722, 1092
Ecl136II GAGCTC 3 cut(s) 214, 1018, 1427
Eco105I TACGTA 1 cut(s) 529
Eco130I CCWWGG 3 cut(s) 344, 597, 1501
Eco24I GRGCYC 3 cut(s) 216, 1020, 1429
Eco31I GGTCTC 1 cut(s) 256
Eco47I GGWCC 1 cut(s) 324
Eco53kI GAGCTC 3 cut(s) 214, 1018, 1427
Eco81I CCTNAGG 1 cut(s) 84
Eco88I CYCGRG 2 cut(s) 701, 797
EcoICRI GAGCTC 3 cut(s) 214, 1018, 1427
EcoRII CCWGG 4 cut(s) 398, 426, 888, 1044
EcoT14I CCWWGG 3 cut(s) 344, 597, 1501
EcoT22I ATGCAT 1 cut(s) 1836
EcoT38I GRGCYC 3 cut(s) 216, 1020, 1429
ErhI CCWWGG 3 cut(s) 344, 597, 1501
FaeI CATG 7 cut(s) 348, 412, 1030, 1547, 1609, 2030, 2061
FaqI GGGAC 7 cut(s) 9, 101, 102, 633, 1158, 1420, 2018
FatI CATG 7 cut(s) 344, 408, 1026, 1543, 1605, 2026, 2057
FauI CCCGC 1 cut(s) 1857
FblI GTMKAC 1 cut(s) 1572
Fnu4HI GCNGC 6 cut(s) 241, 366, 369, 539, 866, 1210
FokI GGATG 5 cut(s) 17, 1022, 1112, 1201, 1843
FriOI GRGCYC 3 cut(s) 216, 1020, 1429
Fsp4HI GCNGC 6 cut(s) 241, 366, 369, 539, 866, 1210
FspBI CTAG 7 cut(s) 92, 542, 723, 1076, 1502, 1589, 1949
GlaI GCGC 3 cut(s) 1007, 1274, 1276
GluI GCNGC 6 cut(s) 241, 366, 369, 539, 866, 1210
GsuI CTGGAG 2 cut(s) 30, 1894
HaeIII GGCC 7 cut(s) 44, 240, 398, 403, 538, 596, 1031
HgaI GACGC 1 cut(s) 11
HhaI GCGC 3 cut(s) 1008, 1275, 1277
Hin1II CATG 7 cut(s) 348, 412, 1030, 1547, 1609, 2030, 2061
Hin6I GCGC 3 cut(s) 1006, 1273, 1275
HinP1I GCGC 3 cut(s) 1006, 1273, 1275
HincII GTYRAC 1 cut(s) 1204
HindII GTYRAC 1 cut(s) 1204
HindIII AAGCTT 2 cut(s) 171, 786
HinfI GANTC 8 cut(s) 455, 1023, 1149, 1246, 1479, 1497, 1612, 1844
HpaI GTTAAC 1 cut(s) 1204
HphI GGTGA 4 cut(s) 1144, 1421, 1607, 1880
Hpy166II GTNNAC 5 cut(s) 1069, 1204, 1420, 1573, 1627
Hpy188I TCNGA 4 cut(s) 141, 1022, 1478, 1992
Hpy188III TCNNGA 8 cut(s) 103, 217, 409, 733, 878, 1841, 1974, 2027
Hpy8I GTNNAC 5 cut(s) 1069, 1204, 1420, 1573, 1627
Hpy99I CGWCG 1 cut(s) 1136
HpyAV CCTTC 3 cut(s) 106, 163, 1348
HpyCH4III ACNGT 4 cut(s) 1636, 1644, 1691, 2071
HpyCH4IV ACGT 3 cut(s) 528, 781, 1071
HpyF10VI GCNNNNNNNGC 7 cut(s) 170, 593, 862, 917, 1003, 1118, 1206
HpyF3I CTNAG 8 cut(s) 84, 503, 583, 828, 869, 970, 1471, 1561
HpySE526I ACGT 3 cut(s) 528, 781, 1071
Hsp92II CATG 7 cut(s) 348, 412, 1030, 1547, 1609, 2030, 2061
HspAI GCGC 3 cut(s) 1006, 1273, 1275
KspAI GTTAAC 1 cut(s) 1204
LmnI GCTCC 4 cut(s) 188, 740, 1023, 1769
Lsp1109I GCAGC 3 cut(s) 377, 852, 1221
LweI GCATC 6 cut(s) 262, 831, 1044, 1567, 1821, 1843
MaeI CTAG 7 cut(s) 92, 542, 723, 1076, 1502, 1589, 1949
MaeII ACGT 3 cut(s) 528, 781, 1071
MaeIII GTNAC 5 cut(s) 646, 925, 1613, 1691, 1868
MbiI CCGCTC 1 cut(s) 1735
MflI RGATCY 1 cut(s) 510
MhlI GDGCHC 6 cut(s) 216, 798, 1020, 1429, 1886, 1937
MlsI TGGCCA 3 cut(s) 44, 398, 596
MluCI AATT 9 cut(s) 15, 942, 965, 1230, 1452, 1666, 1983, 2022, 2064
MluNI TGGCCA 3 cut(s) 44, 398, 596
MlyI GAGTC 4 cut(s) 464, 1255, 1621, 1838
MmeI TCCRAC 6 cut(s) 1242, 1248, 1309, 1337, 1456, 1970
Mox20I TGGCCA 3 cut(s) 44, 398, 596
Mph1103I ATGCAT 1 cut(s) 1836
MscI TGGCCA 3 cut(s) 44, 398, 596
MseI TTAA 3 cut(s) 1203, 1524, 1631
MslI CAYNNNNRTG 3 cut(s) 287, 1179, 1620
Msp20I TGGCCA 3 cut(s) 44, 398, 596
MspA1I CMGCKG 3 cut(s) 368, 587, 920
MspR9I CCNGG 4 cut(s) 400, 428, 890, 1046
Mva1269I GAATGC 1 cut(s) 1999
MvaI CCWGG 4 cut(s) 400, 428, 890, 1046
MvnI CGCG 1 cut(s) 1275
MwoI GCNNNNNNNGC 7 cut(s) 170, 593, 862, 917, 1003, 1118, 1206
NcoI CCATGG 1 cut(s) 344
NheI GCTAGC 2 cut(s) 541, 722
NlaIII CATG 7 cut(s) 348, 412, 1030, 1547, 1609, 2030, 2061
NlaIV GGNNCC 3 cut(s) 537, 1405, 1464
NmeAIII GCCGAG 1 cut(s) 1282
NmuCI GTSAC 5 cut(s) 646, 925, 1613, 1691, 1868
NsiI ATGCAT 1 cut(s) 1836
PagI TCATGA 2 cut(s) 408, 2026
PalAI GGCGCGCC 1 cut(s) 1273
PauI GCGCGC 1 cut(s) 1273
PctI GAATGC 1 cut(s) 1999
PfeI GAWTC 4 cut(s) 1023, 1149, 1479, 1497
PflMI CCANNNNNTGG 1 cut(s) 1892
PkrI GCNGC 6 cut(s) 242, 367, 370, 540, 867, 1211
PleI GAGTC 4 cut(s) 463, 1254, 1620, 1838
PpsI GAGTC 4 cut(s) 463, 1254, 1620, 1838
Ppu21I YACGTR 2 cut(s) 529, 782
Psp124BI GAGCTC 3 cut(s) 216, 1020, 1429
Psp6I CCWGG 4 cut(s) 398, 426, 888, 1044
PspGI CCWGG 4 cut(s) 398, 426, 888, 1044
PspN4I GGNNCC 3 cut(s) 537, 1405, 1464
PspPI GGNCC 2 cut(s) 324, 536
PsrI GAACNNNNNNTAC 2 cut(s) 762, 794
PstNI CAGNNNCTG 1 cut(s) 1438
PsuI RGATCY 1 cut(s) 510
PteI GCGCGC 1 cut(s) 1273
PvuII CAGCTG 2 cut(s) 587, 920
RsaI GTAC 4 cut(s) 357, 988, 1262, 1947
RsaNI GTAC 4 cut(s) 356, 987, 1261, 1946
RseI CAYNNNNRTG 3 cut(s) 287, 1179, 1620
SacI GAGCTC 3 cut(s) 216, 1020, 1429
SaqAI TTAA 3 cut(s) 1203, 1524, 1631
SatI GCNGC 6 cut(s) 241, 366, 369, 539, 866, 1210
Sau96I GGNCC 2 cut(s) 324, 536
ScaI AGTACT 1 cut(s) 357
SchI GAGTC 4 cut(s) 464, 1255, 1621, 1838
ScrFI CCNGG 4 cut(s) 400, 428, 890, 1046
SduI GDGCHC 6 cut(s) 216, 798, 1020, 1429, 1886, 1937
SfaNI GCATC 6 cut(s) 262, 831, 1044, 1567, 1821, 1843
SgsI GGCGCGCC 1 cut(s) 1273
SinI GGWCC 1 cut(s) 324
SmiMI CAYNNNNRTG 3 cut(s) 287, 1179, 1620
SmlI CTYRAG 3 cut(s) 215, 514, 1243
SmoI CTYRAG 3 cut(s) 215, 514, 1243
SnaBI TACGTA 1 cut(s) 529
SpeI ACTAGT 1 cut(s) 1948
Sse9I AATT 9 cut(s) 15, 942, 965, 1230, 1452, 1666, 1983, 2022, 2064
SsiI CCGC 8 cut(s) 241, 248, 368, 539, 1506, 1735, 1850, 2018
SspI AATATT 1 cut(s) 264
SspMI CTAG 7 cut(s) 92, 542, 723, 1076, 1502, 1589, 1949
SstI GAGCTC 3 cut(s) 216, 1020, 1429
StyD4I CCNGG 4 cut(s) 398, 426, 888, 1044
StyI CCWWGG 3 cut(s) 344, 597, 1501
TaaI ACNGT 4 cut(s) 1636, 1644, 1691, 2071
TaiI ACGT 3 cut(s) 531, 784, 1074
TaqI TCGA 1 cut(s) 1134
TaqII GACCGA 1 cut(s) 675
TasI AATT 9 cut(s) 15, 942, 965, 1230, 1452, 1666, 1983, 2022, 2064
TatI WGTACW 3 cut(s) 355, 986, 1260
TauI GCSGC 3 cut(s) 243, 371, 541
TfiI GAWTC 4 cut(s) 1023, 1149, 1479, 1497
Tru1I TTAA 3 cut(s) 1203, 1524, 1631
Tru9I TTAA 3 cut(s) 1203, 1524, 1631
TscAI CASTG 5 cut(s) 235, 832, 1696, 1937, 2076
TseFI GTSAC 5 cut(s) 646, 925, 1613, 1691, 1868
TseI GCWGC 3 cut(s) 365, 865, 1209
Tsp45I GTSAC 5 cut(s) 646, 925, 1613, 1691, 1868
TspDTI ATGAA 5 cut(s) 457, 783, 1281, 2015, 2091
TspGWI ACGGA 1 cut(s) 46
TspRI CASTG 5 cut(s) 235, 832, 1696, 1937, 2076
Van91I CCANNNNNTGG 1 cut(s) 1892
VpaK11BI GGWCC 1 cut(s) 324
XapI RAATTY 1 cut(s) 942
XcmI CCANNNNNNNNNTGG 1 cut(s) 411
XmaJI CCTAGG 1 cut(s) 1501
XmiI GTMKAC 1 cut(s) 1572
XspI CTAG 7 cut(s) 92, 542, 723, 1076, 1502, 1589, 1949
ZrmI AGTACT 1 cut(s) 357
Zsp2I ATGCAT 1 cut(s) 1836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.