MD01G1160100.v1.1

cation H( ) antiporter 15-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0013717
Physical Location & Seq
Reverse (-)
26622555 .. 26624347
1793 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1160100.v1.1.491

Sequence Viewer

Length: 1653 bp
ATGCTAAACCGTATAGAGGAAGGGAAATCTGTCAAGGAGTCATATATCATTACCATTTTCCTGTTTGTTCTTGTGTGCGGATTTCTCAGTGAGCTCGTCAGCCAGCATTACCTGCTGGGACCTCTAGTGCTTGGCTTCGTCGTGCCTGAAGGACCGCCTTTGGGATCTGCATTGGTGATGAAGTTGGAAATTATGGCTACAGGATTGTTCTACCCAAGTTACCTTGCCAATAGCGGGCTGAGGACGAACATCTTCAGGATTAATCCTCGGTCTACATGGATTATGGGTTTTCTTGTTCTCTTTTCTGCCCTGGTGAAGATAGGAGCAGTAATGTTACCAGCGGCCTATTTTGATGTCCCTACGCATGAAGCTTTTGTGCTCGGCGTTATCCTTAATGCAAAAGGCATCACTGAGCTTGTTATGTTCAATATTTGGAAGCAAGGCAAGATTCTGACTGATCAAGAATTCGCGCTGTCCGTGTTCTCAGTGATAGTGATGACAGCAATTGTAACACCTTTGATAAGGTATCTTCATGATCCTTCGAACAAATACGCAGCACTTAAAAGAAGTACTATCCAGCATTTGAAGCGCAGGTCAGAGCTCCAAATCCTGGCCTGTATCCACAACCACGACAATGTTCCCACTGTCATAAACGTCCTGGAGGTATCAAATGCTACAGAAGAGAACCCTGTTGCAGTCATAGGACTCGTCCTCACTGAGCTTGTAGGGCGAACCAACCCTATTCTTGTGGCACACCAACCCCATGACAACTTGGACAACAATACAGCCATGTCCAGCCATATTGTCAAAGCACTGAGGCAGTACGAGCAGCATAACGAAGGGTGCGTATCCCTCCAAGCATTCACTTCCATCTCACAGTATATAACAATGCACGAGGATGTTTGCCGGGTAGCATTAGATAATAGGGTTAACCTGGTGATCCTGCCATTTCACAAGCAATGGGCAGTAGATGGCAACATTGGGGCAGTGAACCGAGCTCTCCGGTCCATGAACAAGAATGTCCTCGAAATGGCACCTTGCTCTGTTGGAATTCTCATTGACCGGGGACTGCTAGCAGGGTCGTTGTCAGTTCTAACCAGCCAGTATATATTCCATGTCGCTGTGATCTTCATTGGTGGTGCAGACGATGCAGAGGCACTAGCCTATGGTGCTCGCATGGCAAGACATCCGAGCGTGGATTTAACAGTTGCCCGGTTGCTTCTCTTTGGTGATGAAAACAGTAAAGAACGGAAGCGGGACACTGACCTGGTTGATGACTACCGGCTAGCTAATGCAGACAATGAGCGGTTTGTCGTCGTGGAAGAGGTGGTAAGAGATGGAGCAAGATTGTCTGCTGTTATCAAATCAATGGTGGATTGTTTTGATTTGATATTGGTAGGCATGCACCATCAGGACTCCCGACTTCTTTCGGGGCTTGGTGAGTGGAGTGAGTGCCCGGAGCTTGGAATCATCGGGGATATGCTTGCTTCCTCGGATTTTCATTGCTCAGTTTCTGTACTAGTGTTGCAGCAACAGAGAATAGGAGGGAAACCAGTTAGTCGGAATCAACCAGTTGACAGAGAACCGCTAATTCAGGATGCACCACCTGAGGAAACAGTAAGAGGATCCTGGACAATTACAGTTAATGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Na_H_Exchanger

Protein Analysis

551

Amino Acids

60.82

Weight (kDa)

5.8

Isoelectric Point (pI)

45.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_H_Exchanger PF00999 10 - 173 1.2e-15 Sodium/hydrogen exchanger, transmembrane
CHX17_2nd PF23256 262 - 358 9.6e-16 Plant cation/H(+) antiporter domain
CHX17_C PF23259 372 - 512 1.2e-16 Plant cation/H(+) antiporter, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013717)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g25390
malus_domestica MD01G1160100.v1.1 MD07G1228400.v1.1
prunus_persica Prupe.2G258100_v2.0.a1 Prupe.2G258100_v2.0.a1
pyrus_communis pycom01g17650 pycom07g20680
rosa_chinensis RchiOBHm_Chr1g0371341
rosa_laevigata RLG00000026970
rosa_multiflora Rmu_sc0000809.1_g000038
rosa_roxburghii Rroxscaffold_4G00285780
rosa_rugosa Rorug01G0363200 Rorug01G0363300
rosa_samantha Rh1AG373100 Rh1BG336600 Rh1CG350000 Rh1DG367700
rosa_wichuraiana Rw1G032820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 120, 582
AccB1I GGYRCC 1 cut(s) 1033
AccB7I CCANNNNNTGG 1 cut(s) 610
AccBSI CCGCTC 1 cut(s) 1306
AccI GTMKAC 1 cut(s) 272
AccII CGCG 1 cut(s) 470
AciI CCGC 7 cut(s) 78, 155, 234, 341, 1255, 1306, 1586
AclWI GGATC 5 cut(s) 172, 530, 934, 1620, 1633
AcsI RAATTY 2 cut(s) 464, 1050
AcuI CTGAAG 2 cut(s) 168, 238
AfaI GTAC 3 cut(s) 571, 824, 1518
AfiI CCNNNNNNNGG 6 cut(s) 16, 161, 234, 610, 1030, 1463
AgsI TTSAA 2 cut(s) 427, 586
AhlI ACTAGT 1 cut(s) 1519
AjnI CCWGG 6 cut(s) 309, 609, 657, 933, 1266, 1628
AluBI AGCT 8 cut(s) 94, 371, 415, 601, 721, 998, 1289, 1462
AluI AGCT 8 cut(s) 94, 371, 415, 601, 721, 998, 1289, 1462
Alw21I GWGCWC 5 cut(s) 96, 381, 603, 1000, 1174
AlwI GGATC 5 cut(s) 172, 530, 934, 1620, 1633
AlwNI CAGNNNCTG 1 cut(s) 1514
AoxI GGCC 2 cut(s) 342, 612
ApeKI GCWGC 3 cut(s) 554, 829, 1528
ApoI RAATTY 2 cut(s) 464, 1050
AseI ATTAAT 1 cut(s) 261
Asp700I GAANNNNTTC 1 cut(s) 251
AspLEI GCGC 2 cut(s) 472, 591
AspS9I GGNCC 3 cut(s) 119, 152, 1005
AsuC2I CCSGG 4 cut(s) 908, 1064, 1213, 1457
AsuHPI GGTGA 5 cut(s) 187, 325, 949, 1241, 1451
AsuII TTCGAA 1 cut(s) 542
AsuNHI GCTAGC 2 cut(s) 1072, 1285
AvaII GGWCC 3 cut(s) 119, 152, 1005
AxyI CCTNAGG 1 cut(s) 1608
BaeGI GKGCMC 1 cut(s) 1457
BamHI GGATCC 1 cut(s) 1625
BanI GGYRCC 1 cut(s) 1033
BanII GRGCYC 3 cut(s) 96, 603, 1000
BauI CACGAG 1 cut(s) 893
Bbv12I GWGCWC 5 cut(s) 96, 381, 603, 1000, 1174
BbvCI CCTCAGC 1 cut(s) 239
BbvI GCAGC 3 cut(s) 566, 841, 1540
BccI CCATC 4 cut(s) 878, 965, 1331, 1416
BciT130I CCWGG 6 cut(s) 311, 611, 659, 935, 1268, 1630
BciVI GTATCC 2 cut(s) 629, 859
BclI TGATCA 1 cut(s) 457
BcnI CCSGG 4 cut(s) 908, 1064, 1213, 1457
BcuI ACTAGT 1 cut(s) 1519
BfaI CTAG 5 cut(s) 125, 1073, 1160, 1286, 1520
BfmI CTRYAG 2 cut(s) 198, 675
BfuAI ACCTGC 2 cut(s) 120, 582
BfuI GTATCC 2 cut(s) 629, 859
BisI GCNGC 4 cut(s) 342, 555, 830, 1529
BlsI GCNGC 4 cut(s) 343, 556, 831, 1530
BmcAI AGTACT 1 cut(s) 571
Bme18I GGWCC 3 cut(s) 119, 152, 1005
BmgT120I GGNCC 3 cut(s) 119, 152, 1005
BmiI GGNNCC 3 cut(s) 120, 1035, 1627
BmsI GCATC 3 cut(s) 414, 1138, 1588
BmtI GCTAGC 2 cut(s) 1076, 1289
BpmI CTGGAG 1 cut(s) 680
Bpu10I CCTNAGC 1 cut(s) 239
Bpu14I TTCGAA 1 cut(s) 542
BpuMI CCSGG 4 cut(s) 908, 1064, 1213, 1457
BsaJI CCNNGG 4 cut(s) 266, 309, 1063, 1491
BsaWI WCCGGW 1 cut(s) 1002
Bsc4I CCNNNNNNNGG 6 cut(s) 16, 161, 234, 610, 1030, 1463
Bse118I RCCGGY 1 cut(s) 1281
Bse1I ACTGG 3 cut(s) 1102, 1553, 1571
Bse21I CCTNAGG 1 cut(s) 1608
Bse3DI GCAATG 2 cut(s) 965, 1501
BseBI CCWGG 6 cut(s) 311, 611, 659, 935, 1268, 1630
BseDI CCNNGG 4 cut(s) 266, 309, 1063, 1491
BseGI GGATG 3 cut(s) 904, 1186, 1603
BseLI CCNNNNNNNGG 6 cut(s) 16, 161, 234, 610, 1030, 1463
BseMI GCAATG 2 cut(s) 965, 1501
BseMII CTCAG 8 cut(s) 100, 230, 402, 498, 708, 806, 1521, 1599
BseNI ACTGG 3 cut(s) 1102, 1553, 1571
BseSI GKGCMC 1 cut(s) 1457
BseXI GCAGC 3 cut(s) 566, 841, 1540
BseYI CCCAGC 1 cut(s) 115
BsgI GTGCAG 1 cut(s) 1161
Bsh1236I CGCG 1 cut(s) 470
BshFI GGCC 2 cut(s) 344, 614
BshNI GGYRCC 1 cut(s) 1033
BsiHKAI GWGCWC 5 cut(s) 96, 381, 603, 1000, 1174
BsiSI CCGG 6 cut(s) 907, 1003, 1063, 1213, 1282, 1457
BslFI GGGAC 4 cut(s) 132, 341, 1080, 1271
BslI CCNNNNNNNGG 6 cut(s) 16, 161, 234, 610, 1030, 1463
BsmFI GGGAC 4 cut(s) 132, 341, 1080, 1271
BsmI GAATGC 1 cut(s) 860
BsnI GGCC 2 cut(s) 344, 614
Bsp119I TTCGAA 1 cut(s) 542
Bsp1286I GDGCHC 6 cut(s) 96, 381, 603, 1000, 1174, 1457
Bsp143I GATC 6 cut(s) 164, 457, 535, 939, 1125, 1625
BspACI CCGC 7 cut(s) 78, 155, 234, 341, 1255, 1306, 1586
BspANI GGCC 2 cut(s) 344, 614
BspCNI CTCAG 8 cut(s) 99, 231, 403, 497, 709, 807, 1520, 1600
BspFNI CGCG 1 cut(s) 470
BspHI TCATGA 1 cut(s) 532
BspLI GGNNCC 3 cut(s) 120, 1035, 1627
BspMI ACCTGC 2 cut(s) 120, 582
BspOI GCTAGC 2 cut(s) 1076, 1289
BspPI GGATC 5 cut(s) 172, 530, 934, 1620, 1633
BspT104I TTCGAA 1 cut(s) 542
BspT107I GGYRCC 1 cut(s) 1033
BsrBI CCGCTC 1 cut(s) 1306
BsrDI GCAATG 2 cut(s) 965, 1501
BsrFI RCCGGY 1 cut(s) 1281
BsrI ACTGG 3 cut(s) 1102, 1553, 1571
BssAI RCCGGY 1 cut(s) 1281
BssECI CCNNGG 4 cut(s) 266, 309, 1063, 1491
BssMI GATC 6 cut(s) 164, 457, 535, 939, 1125, 1625
BssSI CACGAG 1 cut(s) 893
Bst2BI CACGAG 1 cut(s) 893
Bst2UI CCWGG 6 cut(s) 311, 611, 659, 935, 1268, 1630
Bst4CI ACNGT 7 cut(s) 11, 646, 879, 1207, 1241, 1618, 1642
Bst6I CTCTTC 2 cut(s) 675, 1317
BstAPI GCANNNNNTGC 2 cut(s) 112, 1148
BstBI TTCGAA 1 cut(s) 542
BstC8I GCNNGC 7 cut(s) 104, 236, 1074, 1174, 1287, 1403, 1485
BstDEI CTNAG 8 cut(s) 86, 239, 411, 484, 717, 815, 1507, 1608
BstF5I GGATG 3 cut(s) 904, 1186, 1603
BstFNI CGCG 1 cut(s) 470
BstHHI GCGC 2 cut(s) 472, 591
BstKTI GATC 6 cut(s) 167, 460, 538, 942, 1128, 1628
BstMBI GATC 6 cut(s) 164, 457, 535, 939, 1125, 1625
BstMWI GCNNNNNNNGC 7 cut(s) 112, 586, 727, 826, 1148, 1169, 1178
BstNI CCWGG 6 cut(s) 311, 611, 659, 935, 1268, 1630
BstNSI RCATGY 1 cut(s) 1405
BstSFI CTRYAG 2 cut(s) 198, 675
BstSLI GKGCMC 1 cut(s) 1457
BstUI CGCG 1 cut(s) 470
BstV1I GCAGC 3 cut(s) 566, 841, 1540
BstX2I RGATCY 2 cut(s) 164, 1625
BstYI RGATCY 2 cut(s) 164, 1625
Bsu36I CCTNAGG 1 cut(s) 1608
BsuI GTATCC 2 cut(s) 629, 859
BsuRI GGCC 2 cut(s) 344, 614
BtsCI GGATG 3 cut(s) 904, 1186, 1603
BtsI GCAGTG 1 cut(s) 993
BtsIMutI CAGTG 8 cut(s) 94, 408, 492, 642, 714, 812, 993, 1260
BveI ACCTGC 2 cut(s) 120, 582
Cac8I GCNNGC 7 cut(s) 104, 236, 1074, 1174, 1287, 1403, 1485
CaiI CAGNNNCTG 1 cut(s) 1514
CciI TCATGA 1 cut(s) 532
CfoI GCGC 2 cut(s) 472, 591
Cfr10I RCCGGY 1 cut(s) 1281
Cfr13I GGNCC 3 cut(s) 119, 152, 1005
CsiI ACCWGGT 2 cut(s) 933, 1266
Csp6I GTAC 3 cut(s) 570, 823, 1517
CviAII CATG 9 cut(s) 276, 365, 533, 764, 790, 1009, 1115, 1177, 1402
CviQI GTAC 3 cut(s) 570, 823, 1517
DdeI CTNAG 8 cut(s) 86, 239, 411, 484, 717, 815, 1507, 1608
DpnI GATC 6 cut(s) 166, 459, 537, 941, 1127, 1627
DpnII GATC 6 cut(s) 164, 457, 535, 939, 1125, 1625
Eam1104I CTCTTC 2 cut(s) 675, 1317
EarI CTCTTC 2 cut(s) 675, 1317
Ecl136II GAGCTC 3 cut(s) 94, 601, 998
Eco24I GRGCYC 3 cut(s) 96, 603, 1000
Eco47I GGWCC 3 cut(s) 119, 152, 1005
Eco53kI GAGCTC 3 cut(s) 94, 601, 998
Eco57I CTGAAG 2 cut(s) 168, 238
Eco81I CCTNAGG 1 cut(s) 1608
EcoICRI GAGCTC 3 cut(s) 94, 601, 998
EcoO109I RGGNCCY 1 cut(s) 119
EcoRI GAATTC 2 cut(s) 464, 1050
EcoRII CCWGG 6 cut(s) 309, 609, 657, 933, 1266, 1628
EcoT38I GRGCYC 3 cut(s) 96, 603, 1000
FaeI CATG 9 cut(s) 279, 368, 536, 767, 793, 1012, 1118, 1180, 1405
FaqI GGGAC 4 cut(s) 132, 341, 1080, 1271
FatI CATG 9 cut(s) 275, 364, 532, 763, 789, 1008, 1114, 1176, 1401
FauI CCCGC 2 cut(s) 227, 1248
FbaI TGATCA 1 cut(s) 457
FblI GTMKAC 1 cut(s) 272
Fnu4HI GCNGC 4 cut(s) 342, 555, 830, 1529
FokI GGATG 3 cut(s) 911, 1173, 1610
FriOI GRGCYC 3 cut(s) 96, 603, 1000
Fsp4HI GCNGC 4 cut(s) 342, 555, 830, 1529
FspBI CTAG 5 cut(s) 125, 1073, 1160, 1286, 1520
GlaI GCGC 2 cut(s) 471, 590
GluI GCNGC 4 cut(s) 342, 555, 830, 1529
GsaI CCCAGC 1 cut(s) 119
GsuI CTGGAG 1 cut(s) 680
HaeIII GGCC 2 cut(s) 344, 614
HapII CCGG 6 cut(s) 907, 1003, 1063, 1213, 1282, 1457
HhaI GCGC 2 cut(s) 472, 591
Hin1II CATG 9 cut(s) 279, 368, 536, 767, 793, 1012, 1118, 1180, 1405
Hin6I GCGC 2 cut(s) 470, 589
HinP1I GCGC 2 cut(s) 470, 589
HincII GTYRAC 2 cut(s) 931, 1576
HindII GTYRAC 2 cut(s) 931, 1576
HindIII AAGCTT 1 cut(s) 369
HinfI GANTC 6 cut(s) 38, 448, 705, 1415, 1467, 1564
HpaI GTTAAC 1 cut(s) 931
HpaII CCGG 6 cut(s) 907, 1003, 1063, 1213, 1282, 1457
HphI GGTGA 5 cut(s) 187, 325, 949, 1241, 1451
Hpy166II GTNNAC 4 cut(s) 273, 931, 991, 1576
Hpy188I TCNGA 5 cut(s) 453, 598, 1191, 1495, 1563
Hpy188III TCNNGA 6 cut(s) 256, 461, 533, 1412, 1419, 1595
Hpy8I GTNNAC 4 cut(s) 273, 931, 991, 1576
Hpy99I CGWCG 2 cut(s) 143, 1319
HpyAV CCTTC 4 cut(s) 14, 143, 549, 833
HpyCH4III ACNGT 7 cut(s) 11, 646, 879, 1207, 1241, 1618, 1642
HpyCH4IV ACGT 1 cut(s) 654
HpyF10VI GCNNNNNNNGC 7 cut(s) 112, 586, 727, 826, 1148, 1169, 1178
HpyF3I CTNAG 8 cut(s) 86, 239, 411, 484, 717, 815, 1507, 1608
HpySE526I ACGT 1 cut(s) 654
Hsp92II CATG 9 cut(s) 279, 368, 536, 767, 793, 1012, 1118, 1180, 1405
HspAI GCGC 2 cut(s) 470, 589
Ksp22I TGATCA 1 cut(s) 457
KspAI GTTAAC 1 cut(s) 931
Kzo9I GATC 6 cut(s) 164, 457, 535, 939, 1125, 1625
LmnI GCTCC 4 cut(s) 323, 606, 1340, 1459
Lsp1109I GCAGC 3 cut(s) 566, 841, 1540
LweI GCATC 3 cut(s) 414, 1138, 1588
MabI ACCWGGT 2 cut(s) 933, 1266
MaeI CTAG 5 cut(s) 125, 1073, 1160, 1286, 1520
MaeII ACGT 1 cut(s) 654
MaeIII GTNAC 3 cut(s) 218, 333, 508
MalI GATC 6 cut(s) 166, 459, 537, 941, 1127, 1627
MbiI CCGCTC 1 cut(s) 1306
MboI GATC 6 cut(s) 164, 457, 535, 939, 1125, 1625
MboII GAAGA 6 cut(s) 244, 328, 521, 692, 1120, 1334
MfeI CAATTG 1 cut(s) 504
MflI RGATCY 2 cut(s) 164, 1625
MhlI GDGCHC 6 cut(s) 96, 381, 603, 1000, 1174, 1457
MluCI AATT 6 cut(s) 189, 464, 504, 1050, 1590, 1635
MlyI GAGTC 3 cut(s) 47, 699, 1409
MmeI TCCRAC 3 cut(s) 165, 1027, 1541
MroXI GAANNNNTTC 1 cut(s) 251
MseI TTAA 6 cut(s) 261, 393, 561, 930, 1202, 1644
MslI CAYNNNNRTG 2 cut(s) 633, 897
MspA1I CMGCKG 1 cut(s) 341
MspI CCGG 6 cut(s) 907, 1003, 1063, 1213, 1282, 1457
MunI CAATTG 1 cut(s) 504
Mva1269I GAATGC 1 cut(s) 860
MvaI CCWGG 6 cut(s) 311, 611, 659, 935, 1268, 1630
MvnI CGCG 1 cut(s) 470
MwoI GCNNNNNNNGC 7 cut(s) 112, 586, 727, 826, 1148, 1169, 1178
NciI CCSGG 4 cut(s) 908, 1064, 1213, 1457
NdeII GATC 6 cut(s) 164, 457, 535, 939, 1125, 1625
NheI GCTAGC 2 cut(s) 1072, 1285
NlaIII CATG 9 cut(s) 279, 368, 536, 767, 793, 1012, 1118, 1180, 1405
NlaIV GGNNCC 3 cut(s) 120, 1035, 1627
NmeAIII GCCGAG 1 cut(s) 360
NspI RCATGY 1 cut(s) 1405
NspV TTCGAA 1 cut(s) 542
PaeI GCATGC 1 cut(s) 1405
PagI TCATGA 1 cut(s) 532
PcsI WCGNNNNNNNCGW 2 cut(s) 474, 843
PctI GAATGC 1 cut(s) 860
PdmI GAANNNNTTC 1 cut(s) 251
PfeI GAWTC 3 cut(s) 448, 1467, 1564
PflMI CCANNNNNTGG 1 cut(s) 610
PfoI TCCNGGA 2 cut(s) 657, 1628
PkrI GCNGC 4 cut(s) 343, 556, 831, 1530
PleI GAGTC 3 cut(s) 46, 699, 1409
PpsI GAGTC 3 cut(s) 46, 699, 1409
PpuMI RGGWCCY 1 cut(s) 119
PshBI ATTAAT 1 cut(s) 261
Psp124BI GAGCTC 3 cut(s) 96, 603, 1000
Psp5II RGGWCCY 1 cut(s) 119
Psp6I CCWGG 6 cut(s) 309, 609, 657, 933, 1266, 1628
PspFI CCCAGC 1 cut(s) 115
PspGI CCWGG 6 cut(s) 309, 609, 657, 933, 1266, 1628
PspN4I GGNNCC 3 cut(s) 120, 1035, 1627
PspPI GGNCC 3 cut(s) 119, 152, 1005
PspPPI RGGWCCY 1 cut(s) 119
PstNI CAGNNNCTG 1 cut(s) 1514
PsuI RGATCY 2 cut(s) 164, 1625
RsaI GTAC 3 cut(s) 571, 824, 1518
RsaNI GTAC 3 cut(s) 570, 823, 1517
RseI CAYNNNNRTG 2 cut(s) 633, 897
SacI GAGCTC 3 cut(s) 96, 603, 1000
SaqAI TTAA 6 cut(s) 261, 393, 561, 930, 1202, 1644
SatI GCNGC 4 cut(s) 342, 555, 830, 1529
Sau3AI GATC 6 cut(s) 164, 457, 535, 939, 1125, 1625
Sau96I GGNCC 3 cut(s) 119, 152, 1005
ScaI AGTACT 1 cut(s) 571
SchI GAGTC 3 cut(s) 47, 699, 1409
SduI GDGCHC 6 cut(s) 96, 381, 603, 1000, 1174, 1457
SexAI ACCWGGT 2 cut(s) 933, 1266
SfaNI GCATC 3 cut(s) 414, 1138, 1588
SfcI CTRYAG 2 cut(s) 198, 675
SfuI TTCGAA 1 cut(s) 542
SinI GGWCC 3 cut(s) 119, 152, 1005
SmiMI CAYNNNNRTG 2 cut(s) 633, 897
SpeI ACTAGT 1 cut(s) 1519
SphI GCATGC 1 cut(s) 1405
Sse9I AATT 6 cut(s) 189, 464, 504, 1050, 1590, 1635
SsiI CCGC 7 cut(s) 78, 155, 234, 341, 1255, 1306, 1586
SspI AATATT 1 cut(s) 430
SspMI CTAG 5 cut(s) 125, 1073, 1160, 1286, 1520
SstI GAGCTC 3 cut(s) 96, 603, 1000
TaaI ACNGT 7 cut(s) 11, 646, 879, 1207, 1241, 1618, 1642
TaiI ACGT 1 cut(s) 657
TaqI TCGA 2 cut(s) 542, 1026
TaqII GACCGA 1 cut(s) 258
TasI AATT 6 cut(s) 189, 464, 504, 1050, 1590, 1635
TatI WGTACW 2 cut(s) 569, 1516
TauI GCSGC 1 cut(s) 344
TfiI GAWTC 3 cut(s) 448, 1467, 1564
Tru1I TTAA 6 cut(s) 261, 393, 561, 930, 1202, 1644
Tru9I TTAA 6 cut(s) 261, 393, 561, 930, 1202, 1644
TscAI CASTG 8 cut(s) 94, 415, 492, 649, 721, 819, 993, 1267
TseI GCWGC 3 cut(s) 554, 829, 1528
TspDTI ATGAA 7 cut(s) 194, 381, 521, 1025, 1120, 1248, 1490
TspGWI ACGGA 2 cut(s) 466, 1264
TspRI CASTG 8 cut(s) 94, 415, 492, 649, 721, 819, 993, 1267
Van91I CCANNNNNTGG 1 cut(s) 610
VpaK11BI GGWCC 3 cut(s) 119, 152, 1005
VspI ATTAAT 1 cut(s) 261
XapI RAATTY 2 cut(s) 464, 1050
XceI RCATGY 1 cut(s) 1405
XmiI GTMKAC 1 cut(s) 272
XmnI GAANNNNTTC 1 cut(s) 251
XspI CTAG 5 cut(s) 125, 1073, 1160, 1286, 1520
ZrmI AGTACT 1 cut(s) 571
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.