Rw1G032820

cation H( ) antiporter 15-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0013717
Physical Location & Seq
Reverse (-)
61064862 .. 61068104
3243 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G032820.1

Sequence Viewer

Length: 1686 bp
ATGATGTGGATACGAAACCAGGCACAGGAAAGAAAATCTGTCAGGGAGTCGCATATTTTCATCATTTTCGTTCTTGTGCTTGTGTTTGCATTTCTTAGTGAGATCTCAAGCCAGCATTACGTATTGGGGCCGCTAGCGTTTGGCTTTACAATACCTGCCGGACCTCCTTTAGGCTCAGCTGTGGTGGCCAAGGTGGATACTCTTGCTACGGGACTATTCTACCCAACATACCTTGCTGTCACGGGGCTGAAAACAAACATCTACACGATTGATCCTCGGTCTTCGTGGGTTCTCGGGGTTGTTTTTCTCTTCGCTAGCGTGGTCAAGATTGGAGCAGTAATGTTGCCAGCCTGCTATTATGAACAGACTATACGTGAAGCTTTTGTGCTCGGGCTTATTCTCAACGCAAAAGGCATCACTGAGCTTATGATGTTCAACATTTGGAAGCAAACCAAGCTGCTGAGCGATCAAGAATATGCCCTGGCTGTGATCTATGTAGTAGCGATAACAGCTGTTGTGACACCCTTGATAAAAATTCTCTATGATCCCTCAAAGAAATTCTCAGCTACCAAAAGAAGTACAATCCAGCATTTGAAGCGCGAGACAGAGCTCCGAATCATGGCCTGCATCCACTCCCAGGATAACATTCCCACAATGGTAAACGTCCTAGAAGTATCAAATGCAACAGAAGAGAACCCTGTTGCAGTCATTGCCCTCATCCTCGTCGAGCTTGTGGGACGAATCACCCCTGTTCTCATAGCACACCACCCCAATGTCAATCTAAACACCAGCGTTAACAGCAGCACATCCAACTCCAACAAAATTATCAAAGGCTTGAGTCAGTATGCCGAGCACAATGAACGGCGCGCCAGCCTCCAACCATTTACTTCCATCTCACATTATCCAACAATGCACGAAGACATTGTAAGGATAGCATTTGAGAAGAAGGCACACATTGTGATCCTGCCGTTTCACAAGCATTATGCAATAGATGGCACCATTGGGTTAGTGAACAGAGCTCACCAGTCCCTGAACATCAATGTAATTGAAAAGGCACCTTGCTCAGTCGGAATCCTCATTGATCGGGGAATCCTAGGCGGTTCGGTATCAGTTCTTAACAGCCAGTTTATATTCCATGTTGCTGTGATCTTCTTAGGTGGTGTAGACGATGCAGAGGCACTAGCCTATGGCTCTCGCATGGCGAGTCATCCAAATGTGGACTTAACAGTTGCACGGTTTCTTCTCTTTGGAGAAGAAAATTGTAAAGAGAGGAAGCAGGACAGTGACTTGCTTGAAGAATACAGGCGAGCTAATGCAGGAAATGAGCGGTTTGTTGTGGTGGAAGAAGTGGTAAAAGATGGAGCGAAGCTGTCTTCTGTCATCAGCTCAATGGTAGATTGCTTTGATTTGATGTTGGTGGGGATGCATCATCAGGACTCCCCGCTTCTTTCGGGGATTGGTGACTGGAGTGAGTGCCCAGAGCTTGGTATCATTGGCGATATGCTTTCTTCGGCGGATTTTCAGTGCTCACTTTCGGTACTAGTCGTGCAACAACAGAGAATATCAGGAAAACCAATTAGTCGGACTGCAAAACCTGTTGATAAACAACCGCTAATTCATGATGTCCCAGTAGAACAAATGAGAGGATCATGGACAATTACAGTGAATGAAAATGATAGGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Na_H_Exchanger

Protein Analysis

561

Amino Acids

62.06

Weight (kDa)

6.53

Isoelectric Point (pI)

46.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_H_Exchanger PF00999 11 - 176 4.8e-16 Sodium/hydrogen exchanger, transmembrane
CHX17_2nd PF23256 236 - 369 3.9e-15 Plant cation/H(+) antiporter domain
CHX17_C PF23259 379 - 519 1.4e-16 Plant cation/H(+) antiporter, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013717)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g25390
malus_domestica MD01G1160100.v1.1 MD07G1228400.v1.1
prunus_persica Prupe.2G258100_v2.0.a1 Prupe.2G258100_v2.0.a1
pyrus_communis pycom01g17650 pycom07g20680
rosa_chinensis RchiOBHm_Chr1g0371341
rosa_laevigata RLG00000026970
rosa_multiflora Rmu_sc0000809.1_g000038
rosa_roxburghii Rroxscaffold_4G00285780
rosa_rugosa Rorug01G0363200 Rorug01G0363300
rosa_samantha Rh1AG373100 Rh1BG336600 Rh1CG350000 Rh1DG367700
rosa_wichuraiana Rw1G032820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 163
AccB1I GGYRCC 2 cut(s) 995, 1054
AccB7I CCANNNNNTGG 1 cut(s) 1484
AccBSI CCGCTC 1 cut(s) 1327
AccI GTMKAC 1 cut(s) 1164
AccII CGCG 2 cut(s) 600, 867
AciI CCGC 6 cut(s) 131, 1098, 1327, 1442, 1514, 1610
AclWI GGATC 4 cut(s) 266, 539, 955, 1654
AcoI YGGCCR 1 cut(s) 186
AcsI RAATTY 2 cut(s) 534, 557
AdeI CACNNNGTG 1 cut(s) 958
AfaI GTAC 2 cut(s) 580, 1539
AfiI CCNNNNNNNGG 5 cut(s) 25, 170, 619, 637, 1484
AgsI TTSAA 4 cut(s) 436, 595, 1049, 1295
AhlI ACTAGT 1 cut(s) 1540
AjnI CCWGG 3 cut(s) 18, 480, 636
Alw21I GWGCWC 5 cut(s) 390, 612, 855, 1021, 1529
Alw26I GTCTC 1 cut(s) 596
AlwI GGATC 4 cut(s) 266, 539, 955, 1654
AlwNI CAGNNNCTG 1 cut(s) 1030
Ama87I CYCGRG 2 cut(s) 293, 389
AoxI GGCC 3 cut(s) 128, 186, 621
ApeKI GCWGC 2 cut(s) 457, 801
ApoI RAATTY 2 cut(s) 534, 557
AscI GGCGCGCC 1 cut(s) 865
AspA2I CCTAGG 1 cut(s) 1093
AspLEI GCGC 3 cut(s) 600, 867, 869
AspS9I GGNCC 2 cut(s) 128, 161
AsuHPI GGTGA 3 cut(s) 736, 1013, 1472
AsuNHI GCTAGC 2 cut(s) 133, 314
AvaI CYCGRG 2 cut(s) 293, 389
AvaII GGWCC 1 cut(s) 161
AvrII CCTAGG 1 cut(s) 1093
BaeGI GKGCMC 1 cut(s) 1478
BalI TGGCCA 1 cut(s) 188
BanI GGYRCC 2 cut(s) 995, 1054
BanII GRGCYC 2 cut(s) 612, 1021
BbsI GAAGAC 3 cut(s) 273, 924, 1365
Bbv12I GWGCWC 5 cut(s) 390, 612, 855, 1021, 1529
BbvI GCAGC 2 cut(s) 444, 813
BccI CCATC 3 cut(s) 899, 986, 1352
BceAI ACGGC 2 cut(s) 878, 952
BciT130I CCWGG 3 cut(s) 20, 482, 638
BciVI GTATCC 2 cut(s) 3, 190
BcoDI GTCTC 1 cut(s) 596
BcuI ACTAGT 1 cut(s) 1540
BfaI CTAG 6 cut(s) 134, 315, 668, 1094, 1181, 1541
BfuAI ACCTGC 1 cut(s) 163
BfuI GTATCC 2 cut(s) 3, 190
BglII AGATCT 1 cut(s) 102
BisI GCNGC 3 cut(s) 131, 458, 802
BlnI CCTAGG 1 cut(s) 1093
BlpI GCTNAGC 2 cut(s) 175, 461
BlsI GCNGC 3 cut(s) 132, 459, 803
Bme1390I CCNGG 3 cut(s) 20, 482, 638
Bme18I GGWCC 1 cut(s) 161
BmeT110I CYCGRG 2 cut(s) 293, 389
BmgT120I GGNCC 2 cut(s) 128, 161
BmiI GGNNCC 3 cut(s) 129, 997, 1056
BmrFI CCNGG 3 cut(s) 20, 482, 638
BmrI ACTGGG 1 cut(s) 1622
BmsI GCATC 5 cut(s) 423, 636, 1159, 1413, 1435
BmtI GCTAGC 2 cut(s) 137, 318
BmuI ACTGGG 1 cut(s) 1622
BpiI GAAGAC 3 cut(s) 273, 924, 1365
BpmI CTGGAG 1 cut(s) 1486
Bpu1102I GCTNAGC 2 cut(s) 175, 461
BpuEI CTTGAG 2 cut(s) 91, 856
BsaAI YACGTR 2 cut(s) 121, 374
BsaJI CCNNGG 5 cut(s) 189, 275, 480, 636, 1093
Bsc4I CCNNNNNNNGG 5 cut(s) 25, 170, 619, 637, 1484
Bse1I ACTGG 4 cut(s) 1024, 1123, 1469, 1628
Bse3DI GCAATG 1 cut(s) 708
BseBI CCWGG 3 cut(s) 20, 482, 638
BseDI CCNNGG 5 cut(s) 189, 275, 480, 636, 1093
BseGI GGATG 5 cut(s) 627, 717, 806, 1207, 1428
BseLI CCNNNNNNNGG 5 cut(s) 25, 170, 619, 637, 1484
BseMI GCAATG 1 cut(s) 708
BseMII CTCAG 5 cut(s) 189, 411, 452, 576, 1077
BseNI ACTGG 4 cut(s) 1024, 1123, 1469, 1628
BsePI GCGCGC 1 cut(s) 865
BseSI GKGCMC 1 cut(s) 1478
BseXI GCAGC 2 cut(s) 444, 813
Bsh1236I CGCG 2 cut(s) 600, 867
BshFI GGCC 3 cut(s) 130, 188, 623
BshNI GGYRCC 2 cut(s) 995, 1054
BsiHKAI GWGCWC 5 cut(s) 390, 612, 855, 1021, 1529
BsiHKCI CYCGRG 2 cut(s) 293, 389
BsiSI CCGG 1 cut(s) 159
BslFI GGGAC 4 cut(s) 225, 750, 1012, 1610
BslI CCNNNNNNNGG 5 cut(s) 25, 170, 619, 637, 1484
BsmAI GTCTC 1 cut(s) 596
BsmFI GGGAC 4 cut(s) 225, 750, 1012, 1610
BsnI GGCC 3 cut(s) 130, 188, 623
BsoBI CYCGRG 2 cut(s) 293, 389
Bsp1286I GDGCHC 6 cut(s) 390, 612, 855, 1021, 1478, 1529
Bsp143I GATC 9 cut(s) 102, 271, 466, 489, 544, 960, 1081, 1146, 1646
Bsp1720I GCTNAGC 2 cut(s) 175, 461
BspACI CCGC 6 cut(s) 131, 1098, 1327, 1442, 1514, 1610
BspANI GGCC 3 cut(s) 130, 188, 623
BspCNI CTCAG 5 cut(s) 188, 412, 453, 575, 1076
BspFNI CGCG 2 cut(s) 600, 867
BspHI TCATGA 1 cut(s) 1618
BspLI GGNNCC 3 cut(s) 129, 997, 1056
BspMI ACCTGC 1 cut(s) 163
BspOI GCTAGC 2 cut(s) 137, 318
BspPI GGATC 4 cut(s) 266, 539, 955, 1654
BspT107I GGYRCC 2 cut(s) 995, 1054
BsrBI CCGCTC 1 cut(s) 1327
BsrDI GCAATG 1 cut(s) 708
BsrI ACTGG 4 cut(s) 1024, 1123, 1469, 1628
BssECI CCNNGG 5 cut(s) 189, 275, 480, 636, 1093
BssHII GCGCGC 1 cut(s) 865
BssMI GATC 9 cut(s) 102, 271, 466, 489, 544, 960, 1081, 1146, 1646
BssT1I CCWWGG 2 cut(s) 189, 1093
Bst2UI CCWGG 3 cut(s) 20, 482, 638
Bst4CI ACNGT 4 cut(s) 1228, 1236, 1283, 1663
Bst6I CTCTTC 2 cut(s) 314, 684
BstAPI GCANNNNNTGC 1 cut(s) 710
BstBAI YACGTR 2 cut(s) 121, 374
BstC8I GCNNGC 9 cut(s) 113, 135, 316, 348, 352, 625, 867, 871, 1308
BstDEI CTNAG 7 cut(s) 95, 175, 420, 461, 562, 1063, 1153
BstENI CCTNNNNNAGG 1 cut(s) 168
BstF5I GGATG 5 cut(s) 627, 717, 806, 1207, 1428
BstFNI CGCG 2 cut(s) 600, 867
BstHHI GCGC 3 cut(s) 600, 867, 869
BstKTI GATC 9 cut(s) 105, 274, 469, 492, 547, 963, 1084, 1149, 1649
BstMAI GTCTC 1 cut(s) 596
BstMBI GATC 9 cut(s) 102, 271, 466, 489, 544, 960, 1081, 1146, 1646
BstMWI GCNNNNNNNGC 6 cut(s) 185, 454, 509, 595, 710, 798
BstNI CCWGG 3 cut(s) 20, 482, 638
BstSCI CCNGG 3 cut(s) 18, 480, 636
BstSLI GKGCMC 1 cut(s) 1478
BstSNI TACGTA 1 cut(s) 121
BstUI CGCG 2 cut(s) 600, 867
BstV1I GCAGC 2 cut(s) 444, 813
BstV2I GAAGAC 3 cut(s) 273, 924, 1365
BstX2I RGATCY 1 cut(s) 102
BstYI RGATCY 1 cut(s) 102
BsuI GTATCC 2 cut(s) 3, 190
BsuRI GGCC 3 cut(s) 130, 188, 623
BtsCI GGATG 5 cut(s) 627, 717, 806, 1207, 1428
BtsIMutI CAGTG 4 cut(s) 417, 1288, 1529, 1668
BveI ACCTGC 1 cut(s) 163
Cac8I GCNNGC 9 cut(s) 113, 135, 316, 348, 352, 625, 867, 871, 1308
CaiI CAGNNNCTG 1 cut(s) 1030
CciI TCATGA 1 cut(s) 1618
CfoI GCGC 3 cut(s) 600, 867, 869
Cfr13I GGNCC 2 cut(s) 128, 161
Csp6I GTAC 2 cut(s) 579, 1538
CviAII CATG 5 cut(s) 619, 1136, 1198, 1619, 1650
CviQI GTAC 2 cut(s) 579, 1538
DdeI CTNAG 7 cut(s) 95, 175, 420, 461, 562, 1063, 1153
DpnI GATC 9 cut(s) 104, 273, 468, 491, 546, 962, 1083, 1148, 1648
DpnII GATC 9 cut(s) 102, 271, 466, 489, 544, 960, 1081, 1146, 1646
DraIII CACNNNGTG 1 cut(s) 958
EaeI YGGCCR 1 cut(s) 186
Eam1104I CTCTTC 2 cut(s) 314, 684
EarI CTCTTC 2 cut(s) 314, 684
EciI GGCGGA 1 cut(s) 1529
Ecl136II GAGCTC 2 cut(s) 610, 1019
Eco105I TACGTA 1 cut(s) 121
Eco130I CCWWGG 2 cut(s) 189, 1093
Eco24I GRGCYC 2 cut(s) 612, 1021
Eco47I GGWCC 1 cut(s) 161
Eco53kI GAGCTC 2 cut(s) 610, 1019
Eco88I CYCGRG 2 cut(s) 293, 389
EcoICRI GAGCTC 2 cut(s) 610, 1019
EcoNI CCTNNNNNAGG 1 cut(s) 168
EcoRII CCWGG 3 cut(s) 18, 480, 636
EcoT14I CCWWGG 2 cut(s) 189, 1093
EcoT22I ATGCAT 1 cut(s) 1428
EcoT38I GRGCYC 2 cut(s) 612, 1021
ErhI CCWWGG 2 cut(s) 189, 1093
FaeI CATG 5 cut(s) 622, 1139, 1201, 1622, 1653
FaqI GGGAC 4 cut(s) 225, 750, 1012, 1610
FatI CATG 5 cut(s) 618, 1135, 1197, 1618, 1649
FauI CCCGC 1 cut(s) 1449
FblI GTMKAC 1 cut(s) 1164
Fnu4HI GCNGC 3 cut(s) 131, 458, 802
FokI GGATG 5 cut(s) 614, 704, 793, 1194, 1435
FriOI GRGCYC 2 cut(s) 612, 1021
Fsp4HI GCNGC 3 cut(s) 131, 458, 802
FspBI CTAG 6 cut(s) 134, 315, 668, 1094, 1181, 1541
GlaI GCGC 3 cut(s) 599, 866, 868
GluI GCNGC 3 cut(s) 131, 458, 802
GsuI CTGGAG 1 cut(s) 1486
HaeIII GGCC 3 cut(s) 130, 188, 623
HapII CCGG 1 cut(s) 159
HhaI GCGC 3 cut(s) 600, 867, 869
Hin1II CATG 5 cut(s) 622, 1139, 1201, 1622, 1653
Hin6I GCGC 3 cut(s) 598, 865, 867
HinP1I GCGC 3 cut(s) 598, 865, 867
HincII GTYRAC 1 cut(s) 796
HindII GTYRAC 1 cut(s) 796
HindIII AAGCTT 1 cut(s) 378
HinfI GANTC 8 cut(s) 47, 615, 741, 838, 1071, 1089, 1204, 1436
HpaI GTTAAC 1 cut(s) 796
HpaII CCGG 1 cut(s) 159
HphI GGTGA 3 cut(s) 736, 1013, 1472
Hpy166II GTNNAC 5 cut(s) 661, 796, 1012, 1165, 1219
Hpy188I TCNGA 3 cut(s) 614, 1070, 1584
Hpy188III TCNNGA 5 cut(s) 325, 470, 1433, 1566, 1619
Hpy8I GTNNAC 5 cut(s) 661, 796, 1012, 1165, 1219
Hpy99I CGWCG 1 cut(s) 728
HpyAV CCTTC 1 cut(s) 940
HpyCH4III ACNGT 4 cut(s) 1228, 1236, 1283, 1663
HpyCH4IV ACGT 3 cut(s) 120, 373, 663
HpyF10VI GCNNNNNNNGC 6 cut(s) 185, 454, 509, 595, 710, 798
HpyF3I CTNAG 7 cut(s) 95, 175, 420, 461, 562, 1063, 1153
HpySE526I ACGT 3 cut(s) 120, 373, 663
Hsp92II CATG 5 cut(s) 622, 1139, 1201, 1622, 1653
HspAI GCGC 3 cut(s) 598, 865, 867
KspAI GTTAAC 1 cut(s) 796
Kzo9I GATC 9 cut(s) 102, 271, 466, 489, 544, 960, 1081, 1146, 1646
LmnI GCTCC 3 cut(s) 332, 615, 1361
Lsp1109I GCAGC 2 cut(s) 444, 813
LweI GCATC 5 cut(s) 423, 636, 1159, 1413, 1435
MaeI CTAG 6 cut(s) 134, 315, 668, 1094, 1181, 1541
MaeII ACGT 3 cut(s) 120, 373, 663
MaeIII GTNAC 4 cut(s) 238, 517, 1283, 1460
MalI GATC 9 cut(s) 104, 273, 468, 491, 546, 962, 1083, 1148, 1648
MbiI CCGCTC 1 cut(s) 1327
MboI GATC 9 cut(s) 102, 271, 466, 489, 544, 960, 1081, 1146, 1646
MflI RGATCY 1 cut(s) 102
MhlI GDGCHC 6 cut(s) 390, 612, 855, 1021, 1478, 1529
MlsI TGGCCA 1 cut(s) 188
MluCI AATT 8 cut(s) 534, 557, 822, 1044, 1258, 1575, 1614, 1656
MluNI TGGCCA 1 cut(s) 188
MlyI GAGTC 4 cut(s) 56, 847, 1213, 1430
MmeI TCCRAC 6 cut(s) 834, 840, 901, 929, 1048, 1562
Mox20I TGGCCA 1 cut(s) 188
Mph1103I ATGCAT 1 cut(s) 1428
MscI TGGCCA 1 cut(s) 188
MseI TTAA 3 cut(s) 795, 1116, 1223
MslI CAYNNNNRTG 2 cut(s) 771, 1212
Msp20I TGGCCA 1 cut(s) 188
MspA1I CMGCKG 2 cut(s) 179, 512
MspI CCGG 1 cut(s) 159
MspR9I CCNGG 3 cut(s) 20, 482, 638
MvaI CCWGG 3 cut(s) 20, 482, 638
MvnI CGCG 2 cut(s) 600, 867
MwoI GCNNNNNNNGC 6 cut(s) 185, 454, 509, 595, 710, 798
NdeII GATC 9 cut(s) 102, 271, 466, 489, 544, 960, 1081, 1146, 1646
NheI GCTAGC 2 cut(s) 133, 314
NlaIII CATG 5 cut(s) 622, 1139, 1201, 1622, 1653
NlaIV GGNNCC 3 cut(s) 129, 997, 1056
NmeAIII GCCGAG 1 cut(s) 874
NmuCI GTSAC 4 cut(s) 238, 517, 1283, 1460
NsiI ATGCAT 1 cut(s) 1428
PagI TCATGA 1 cut(s) 1618
PalAI GGCGCGCC 1 cut(s) 865
PauI GCGCGC 1 cut(s) 865
PfeI GAWTC 4 cut(s) 615, 741, 1071, 1089
PflMI CCANNNNNTGG 1 cut(s) 1484
PkrI GCNGC 3 cut(s) 132, 459, 803
PleI GAGTC 4 cut(s) 55, 846, 1212, 1430
PpsI GAGTC 4 cut(s) 55, 846, 1212, 1430
Ppu21I YACGTR 2 cut(s) 121, 374
Psp124BI GAGCTC 2 cut(s) 612, 1021
Psp6I CCWGG 3 cut(s) 18, 480, 636
PspGI CCWGG 3 cut(s) 18, 480, 636
PspN4I GGNNCC 3 cut(s) 129, 997, 1056
PspPI GGNCC 2 cut(s) 128, 161
PsrI GAACNNNNNNTAC 2 cut(s) 354, 386
PstNI CAGNNNCTG 1 cut(s) 1030
PsuI RGATCY 1 cut(s) 102
PteI GCGCGC 1 cut(s) 865
PvuII CAGCTG 2 cut(s) 179, 512
RsaI GTAC 2 cut(s) 580, 1539
RsaNI GTAC 2 cut(s) 579, 1538
RseI CAYNNNNRTG 2 cut(s) 771, 1212
SacI GAGCTC 2 cut(s) 612, 1021
SaqAI TTAA 3 cut(s) 795, 1116, 1223
SatI GCNGC 3 cut(s) 131, 458, 802
Sau3AI GATC 9 cut(s) 102, 271, 466, 489, 544, 960, 1081, 1146, 1646
Sau96I GGNCC 2 cut(s) 128, 161
SchI GAGTC 4 cut(s) 56, 847, 1213, 1430
ScrFI CCNGG 3 cut(s) 20, 482, 638
SduI GDGCHC 6 cut(s) 390, 612, 855, 1021, 1478, 1529
SfaNI GCATC 5 cut(s) 423, 636, 1159, 1413, 1435
SgsI GGCGCGCC 1 cut(s) 865
SinI GGWCC 1 cut(s) 161
SmiMI CAYNNNNRTG 2 cut(s) 771, 1212
SmlI CTYRAG 2 cut(s) 106, 835
SmoI CTYRAG 2 cut(s) 106, 835
SnaBI TACGTA 1 cut(s) 121
SpeI ACTAGT 1 cut(s) 1540
Sse9I AATT 8 cut(s) 534, 557, 822, 1044, 1258, 1575, 1614, 1656
SsiI CCGC 6 cut(s) 131, 1098, 1327, 1442, 1514, 1610
SspMI CTAG 6 cut(s) 134, 315, 668, 1094, 1181, 1541
SstI GAGCTC 2 cut(s) 612, 1021
StyD4I CCNGG 3 cut(s) 18, 480, 636
StyI CCWWGG 2 cut(s) 189, 1093
TaaI ACNGT 4 cut(s) 1228, 1236, 1283, 1663
TaiI ACGT 3 cut(s) 123, 376, 666
TaqI TCGA 1 cut(s) 726
TaqII GACCGA 1 cut(s) 267
TasI AATT 8 cut(s) 534, 557, 822, 1044, 1258, 1575, 1614, 1656
TatI WGTACW 1 cut(s) 578
TauI GCSGC 1 cut(s) 133
TfiI GAWTC 4 cut(s) 615, 741, 1071, 1089
Tru1I TTAA 3 cut(s) 795, 1116, 1223
Tru9I TTAA 3 cut(s) 795, 1116, 1223
TscAI CASTG 4 cut(s) 424, 1288, 1529, 1668
TseFI GTSAC 4 cut(s) 238, 517, 1283, 1460
TseI GCWGC 2 cut(s) 457, 801
Tsp45I GTSAC 4 cut(s) 238, 517, 1283, 1460
TspDTI ATGAA 5 cut(s) 49, 375, 873, 1607, 1683
TspRI CASTG 4 cut(s) 424, 1288, 1529, 1668
Van91I CCANNNNNTGG 1 cut(s) 1484
VpaK11BI GGWCC 1 cut(s) 161
XagI CCTNNNNNAGG 1 cut(s) 168
XapI RAATTY 2 cut(s) 534, 557
XmaJI CCTAGG 1 cut(s) 1093
XmiI GTMKAC 1 cut(s) 1164
XspI CTAG 6 cut(s) 134, 315, 668, 1094, 1181, 1541
Zsp2I ATGCAT 1 cut(s) 1428
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.