RchiOBHm_Chr1g0371341

cation H( ) antiporter 15-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0013717
Physical Location & Seq
Reverse (-)
60579555 .. 60582040
2486 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ59543

Sequence Viewer

Length: 2229 bp
ATGGTATTCGGTCCATCACTTCTGGGGAATCTCAAGAAAATCTCGGACATCCTTTTCCCTGTAAAAGGCATCATAGTGCTCGAAACACTTGCAACATGGGGCCTCACATTCTTCCTATTTTCGATGGGAGTGAAGATGGATGCTGAAGGAATTGTGCGTCCCCAACGGAAGTGCTTGGCCATTGGAACATCAATGTTCCTTTGCACATTGATACTCCCTCAGGGACTAACCTTCCTCTTGATGCGCTATGTCCCCAAATTGGACAGGTCGCTTCGGAACTCACTCCCCTTCTTATCTGCTACGCAAGCTTTGACAAGCTCCGCTGTTATTGGTTGTCTACTTACCGAGCTCAAGATTTTGAACACTGACATTGGCCGCACGGCGGTCTCAACGGCAATATTTAGTGATGCTATTGGCATAACGATGAGTGCGATTGCTATTGCAATAAGTGATAAGAGGACCAAAAATTCAATAATACCATGGCTCGCAGTACTACAAGCAGCGGTTCTTGTGTTGGTCATTCTCCTTGTGGCCAGGCCAATCATGATGTGGATACGAAACCAGGCACAGGAAAGAAAATCTGTCAGGGAGTCGCATATTTTCATCATTTTCGTTCTTGTGCTTGTGTTTGCATTTCTTAGTGAGATCTCAAGCCAGCATTACGTATTGGGGCCGCTAGCGTTTGGCTTTACAATACCTGCCGGACCTCCTTTAGGCTCAGCTGTGGTGGCCAAGGTGGATACTCTTGCTACGGGACTATTCTACCCAACATACCTTGCTGTCACGGGGCTGAAAACAAACATCTACACGATTGATCCTCGGTCTTCGTGGGTTCTCGGGGTTGTTTTTCTCTTCGCTAGCGTGGTCAAGATTGGAGCAGTAATGTTGCCAGCCTGCTATTATGAACAGACTATACGTGAAGCTTTTGTGCTCGGGCTTATTCTCAACGCAAAAGGCATCACTGAGCTTATGATGTTCAACATTTGGAAGCAAACCAAGCTGCTGAGCGATCAAGAATATGCCCTGGCTGTGATCTATGTAGTAGCGATAACAGCTGTTGTGACACCCTTGATAAAAATTCTCTATGATCCCTCAAATAAATTCTCAGCTACCAAAAGAAGTACAATCCAGCATTTGAAGCGCGAGACAGAGCTCCGAATCATGGCCTGCATCCACTCCCAGGATAACATTCCCACAATGGTAAACGTCCTAGAAGTATCAAATGCAACAGAAGAGAACCCTGTTGCAGTAATTGCCCTCATCCTCGTCGAGCTTGTGGGACGAATCACCCCTGTTCTCATAGCACACCACCCCAATGTCAATCTAAACACCAGCGTTAACAGCAGCACATCCAACTCCAACAAAATTATCAAAGGCTTGAGTCAGTATGCCGAGTACAATGAACGGCGCGCCAGCCTCCAACCATTCACTTCCATCTCACATTATCCAACAATGCACGAAGACATTGTAAGGATAGCATTTGAGAAGAAGGCACACATTGTGATCCTGCCGTTTCACAAGCATTATGCAATAGATGGCACCATTGGGTTAGTGAACAGAGCTCACCAGTCCCTGAACATCAATGTAATTGAAAAGGCACCTTGCTCAGTCGGAATCCTCATTGATCGGGGAATCCTAGGCGGTTCCGTATCAGTTCTTAACAGCCAGTTTATATTCCATGTTGCTGTGATCTTCTTAGGTGGTGTAGACGATGCAGAGGCACTAGCCTATGGCTCTCGCATGTCGAGTCATCCAAATGTGGACTTAACAGTTGCACGGTTTCTTCTCTTTGGAGAAGAAAATTGTAAAGAGAGGAAGCAGGACAGTGACTTGCTTGAAGAATACAGGCGAGCTAATGCAGGAAATGAGCGGTTTGTTGTGGTGGAAGAAGTGGTAAAAGATGGAGCGAAGCTGTCTTCTGTCATCAGCTCAATGGTAGATTGCTTTGATTTGATGTTGGTGGGGATGCATCATCAGGACTCCCCGCTTCTTTCGGGGATTGGTGACTGGAGTGAGTGCCCAGAGCTTGGTATCATTGGCGATATGCTTTCTTCGGCGGATTTTCAGTGCTCACTTTCGGTACTAGTCGTGCAACAACAGAGAATATCAGGAAAACCAATTAGTCGGACTGCAAAACCTGTTGATAAACAACCGCTAATTCATGATGTCCCAGTAGAACAAATGAGAGGATCATGGACAATTACAGTGAATGAAAATGATAGGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Na_H_Exchanger

Protein Analysis

742

Amino Acids

81.62

Weight (kDa)

8.2

Isoelectric Point (pI)

44.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_H_Exchanger PF00999 1 - 357 6.1e-37 Sodium/hydrogen exchanger, transmembrane
CHX17_2nd PF23256 417 - 550 4.8e-15 Plant cation/H(+) antiporter domain
CHX17_C PF23259 560 - 700 7.7e-16 Plant cation/H(+) antiporter, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013717)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g25390
malus_domestica MD01G1160100.v1.1 MD07G1228400.v1.1
prunus_persica Prupe.2G258100_v2.0.a1 Prupe.2G258100_v2.0.a1
pyrus_communis pycom01g17650 pycom07g20680
rosa_chinensis RchiOBHm_Chr1g0371341
rosa_laevigata RLG00000026970
rosa_multiflora Rmu_sc0000809.1_g000038
rosa_roxburghii Rroxscaffold_4G00285780
rosa_rugosa Rorug01G0363200 Rorug01G0363300
rosa_samantha Rh1AG373100 Rh1BG336600 Rh1CG350000 Rh1DG367700
rosa_wichuraiana Rw1G032820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 706
AccB1I GGYRCC 2 cut(s) 1538, 1597
AccB7I CCANNNNNTGG 1 cut(s) 2027
AccBSI CCGCTC 1 cut(s) 1870
AccI GTMKAC 2 cut(s) 337, 1707
AccII CGCG 2 cut(s) 1143, 1410
AclWI GGATC 4 cut(s) 809, 1082, 1498, 2197
AcoI YGGCCR 4 cut(s) 177, 373, 531, 729
AcsI RAATTY 3 cut(s) 466, 1077, 1100
AcuI CTGAAG 1 cut(s) 165
AdeI CACNNNGTG 1 cut(s) 1501
AfaI GTAC 4 cut(s) 492, 1123, 1397, 2082
AfiI CCNNNNNNNGG 8 cut(s) 65, 259, 382, 568, 713, 1162, 1180, 2027
AgsI TTSAA 6 cut(s) 361, 471, 979, 1138, 1592, 1838
AhlI ACTAGT 1 cut(s) 2083
AjnI CCWGG 4 cut(s) 533, 561, 1023, 1179
Alw21I GWGCWC 6 cut(s) 81, 351, 933, 1155, 1564, 2072
Alw26I GTCTC 2 cut(s) 391, 1139
AlwI GGATC 4 cut(s) 809, 1082, 1498, 2197
AlwNI CAGNNNCTG 1 cut(s) 1573
Ama87I CYCGRG 2 cut(s) 836, 932
AoxI GGCC 8 cut(s) 100, 177, 373, 531, 536, 671, 729, 1164
ApeKI GCWGC 3 cut(s) 500, 1000, 1344
ApoI RAATTY 3 cut(s) 466, 1077, 1100
AscI GGCGCGCC 1 cut(s) 1408
AspA2I CCTAGG 1 cut(s) 1636
AspLEI GCGC 4 cut(s) 246, 1143, 1410, 1412
AspS9I GGNCC 5 cut(s) 11, 100, 459, 671, 704
AsuHPI GGTGA 3 cut(s) 1279, 1556, 2015
AsuNHI GCTAGC 2 cut(s) 676, 857
AvaI CYCGRG 2 cut(s) 836, 932
AvaII GGWCC 3 cut(s) 11, 459, 704
AvrII CCTAGG 1 cut(s) 1636
AxyI CCTNAGG 1 cut(s) 219
BaeGI GKGCMC 1 cut(s) 2021
BalI TGGCCA 3 cut(s) 179, 533, 731
BanI GGYRCC 2 cut(s) 1538, 1597
BanII GRGCYC 3 cut(s) 351, 1155, 1564
BbsI GAAGAC 3 cut(s) 816, 1467, 1908
Bbv12I GWGCWC 6 cut(s) 81, 351, 933, 1155, 1564, 2072
BbvI GCAGC 3 cut(s) 512, 987, 1356
BccI CCATC 6 cut(s) 22, 118, 130, 1442, 1529, 1895
BceAI ACGGC 4 cut(s) 396, 408, 1421, 1495
BcgI CGANNNNNNTGC 2 cut(s) 71, 105
BciT130I CCWGG 4 cut(s) 535, 563, 1025, 1181
BciVI GTATCC 2 cut(s) 546, 733
BcoDI GTCTC 2 cut(s) 391, 1139
BcuI ACTAGT 1 cut(s) 2083
BfaI CTAG 6 cut(s) 677, 858, 1211, 1637, 1724, 2084
BfuAI ACCTGC 1 cut(s) 706
BfuI GTATCC 2 cut(s) 546, 733
BglII AGATCT 1 cut(s) 645
BisI GCNGC 5 cut(s) 376, 501, 674, 1001, 1345
BlnI CCTAGG 1 cut(s) 1636
BlpI GCTNAGC 2 cut(s) 718, 1004
BlsI GCNGC 5 cut(s) 377, 502, 675, 1002, 1346
BmcAI AGTACT 1 cut(s) 492
Bme1390I CCNGG 4 cut(s) 535, 563, 1025, 1181
Bme18I GGWCC 3 cut(s) 11, 459, 704
BmeT110I CYCGRG 2 cut(s) 836, 932
BmgT120I GGNCC 5 cut(s) 11, 100, 459, 671, 704
BmiI GGNNCC 5 cut(s) 101, 672, 1540, 1599, 1645
BmrFI CCNGG 4 cut(s) 535, 563, 1025, 1181
BmrI ACTGGG 1 cut(s) 2165
BmsI GCATC 9 cut(s) 78, 130, 231, 397, 966, 1179, 1702, 1956, 1978
BmtI GCTAGC 2 cut(s) 680, 861
BmuI ACTGGG 1 cut(s) 2165
BpiI GAAGAC 3 cut(s) 816, 1467, 1908
BpmI CTGGAG 1 cut(s) 2029
Bpu1102I GCTNAGC 2 cut(s) 718, 1004
BpuEI CTTGAG 4 cut(s) 17, 335, 634, 1399
BsaAI YACGTR 2 cut(s) 664, 917
BsaI GGTCTC 1 cut(s) 391
BsaJI CCNNGG 6 cut(s) 479, 732, 818, 1023, 1179, 1636
Bsc4I CCNNNNNNNGG 8 cut(s) 65, 259, 382, 568, 713, 1162, 1180, 2027
Bse1I ACTGG 4 cut(s) 1567, 1666, 2012, 2171
Bse21I CCTNAGG 1 cut(s) 219
BseBI CCWGG 4 cut(s) 535, 563, 1025, 1181
BseDI CCNNGG 6 cut(s) 479, 732, 818, 1023, 1179, 1636
BseGI GGATG 7 cut(s) 48, 145, 1170, 1260, 1349, 1750, 1971
BseLI CCNNNNNNNGG 8 cut(s) 65, 259, 382, 568, 713, 1162, 1180, 2027
BseMII CTCAG 6 cut(s) 233, 732, 954, 995, 1119, 1620
BseNI ACTGG 4 cut(s) 1567, 1666, 2012, 2171
BsePI GCGCGC 1 cut(s) 1408
BseSI GKGCMC 1 cut(s) 2021
BseXI GCAGC 3 cut(s) 512, 987, 1356
Bsh1236I CGCG 2 cut(s) 1143, 1410
BshFI GGCC 8 cut(s) 102, 179, 375, 533, 538, 673, 731, 1166
BshNI GGYRCC 2 cut(s) 1538, 1597
BsiHKAI GWGCWC 6 cut(s) 81, 351, 933, 1155, 1564, 2072
BsiHKCI CYCGRG 2 cut(s) 836, 932
BsiSI CCGG 1 cut(s) 702
BslFI GGGAC 7 cut(s) 144, 236, 237, 768, 1293, 1555, 2153
BslI CCNNNNNNNGG 8 cut(s) 65, 259, 382, 568, 713, 1162, 1180, 2027
BsmAI GTCTC 2 cut(s) 391, 1139
BsmFI GGGAC 7 cut(s) 144, 236, 237, 768, 1293, 1555, 2153
BsnI GGCC 8 cut(s) 102, 179, 375, 533, 538, 673, 731, 1166
Bso31I GGTCTC 1 cut(s) 391
BsoBI CYCGRG 2 cut(s) 836, 932
Bsp1286I GDGCHC 7 cut(s) 81, 351, 933, 1155, 1564, 2021, 2072
Bsp143I GATC 9 cut(s) 645, 814, 1009, 1032, 1087, 1503, 1624, 1689, 2189
Bsp1720I GCTNAGC 2 cut(s) 718, 1004
Bsp19I CCATGG 1 cut(s) 479
BspANI GGCC 8 cut(s) 102, 179, 375, 533, 538, 673, 731, 1166
BspCNI CTCAG 6 cut(s) 232, 731, 955, 996, 1118, 1619
BspFNI CGCG 2 cut(s) 1143, 1410
BspHI TCATGA 2 cut(s) 543, 2161
BspLI GGNNCC 5 cut(s) 101, 672, 1540, 1599, 1645
BspMI ACCTGC 1 cut(s) 706
BspOI GCTAGC 2 cut(s) 680, 861
BspPI GGATC 4 cut(s) 809, 1082, 1498, 2197
BspT107I GGYRCC 2 cut(s) 1538, 1597
BspTNI GGTCTC 1 cut(s) 391
BsrBI CCGCTC 1 cut(s) 1870
BsrI ACTGG 4 cut(s) 1567, 1666, 2012, 2171
BssECI CCNNGG 6 cut(s) 479, 732, 818, 1023, 1179, 1636
BssHII GCGCGC 1 cut(s) 1408
BssMI GATC 9 cut(s) 645, 814, 1009, 1032, 1087, 1503, 1624, 1689, 2189
BssT1I CCWWGG 3 cut(s) 479, 732, 1636
Bst2UI CCWGG 4 cut(s) 535, 563, 1025, 1181
Bst4CI ACNGT 4 cut(s) 1771, 1779, 1826, 2206
Bst6I CTCTTC 2 cut(s) 857, 1227
BstAPI GCANNNNNTGC 1 cut(s) 1253
BstBAI YACGTR 2 cut(s) 664, 917
BstDEI CTNAG 8 cut(s) 219, 638, 718, 963, 1004, 1105, 1606, 1696
BstDSI CCRYGG 1 cut(s) 479
BstENI CCTNNNNNAGG 2 cut(s) 63, 711
BstF5I GGATG 7 cut(s) 48, 145, 1170, 1260, 1349, 1750, 1971
BstFNI CGCG 2 cut(s) 1143, 1410
BstHHI GCGC 4 cut(s) 246, 1143, 1410, 1412
BstKTI GATC 9 cut(s) 648, 817, 1012, 1035, 1090, 1506, 1627, 1692, 2192
BstMAI GTCTC 2 cut(s) 391, 1139
BstMBI GATC 9 cut(s) 645, 814, 1009, 1032, 1087, 1503, 1624, 1689, 2189
BstMWI GCNNNNNNNGC 7 cut(s) 305, 728, 997, 1052, 1138, 1253, 1341
BstNI CCWGG 4 cut(s) 535, 563, 1025, 1181
BstNSI RCATGY 1 cut(s) 1744
BstSCI CCNGG 4 cut(s) 533, 561, 1023, 1179
BstSLI GKGCMC 1 cut(s) 2021
BstSNI TACGTA 1 cut(s) 664
BstUI CGCG 2 cut(s) 1143, 1410
BstV1I GCAGC 3 cut(s) 512, 987, 1356
BstV2I GAAGAC 3 cut(s) 816, 1467, 1908
BstX2I RGATCY 1 cut(s) 645
BstYI RGATCY 1 cut(s) 645
Bsu36I CCTNAGG 1 cut(s) 219
BsuI GTATCC 2 cut(s) 546, 733
BsuRI GGCC 8 cut(s) 102, 179, 375, 533, 538, 673, 731, 1166
BtgI CCRYGG 1 cut(s) 479
BtsCI GGATG 7 cut(s) 48, 145, 1170, 1260, 1349, 1750, 1971
BtsIMutI CAGTG 5 cut(s) 363, 960, 1831, 2072, 2211
BveI ACCTGC 1 cut(s) 706
CaiI CAGNNNCTG 1 cut(s) 1573
CciI TCATGA 2 cut(s) 543, 2161
CfoI GCGC 4 cut(s) 246, 1143, 1410, 1412
Cfr13I GGNCC 5 cut(s) 11, 100, 459, 671, 704
CseI GACGC 1 cut(s) 146
Csp6I GTAC 4 cut(s) 491, 1122, 1396, 2081
CviAII CATG 8 cut(s) 96, 480, 544, 1162, 1679, 1741, 2162, 2193
CviQI GTAC 4 cut(s) 491, 1122, 1396, 2081
DdeI CTNAG 8 cut(s) 219, 638, 718, 963, 1004, 1105, 1606, 1696
DpnI GATC 9 cut(s) 647, 816, 1011, 1034, 1089, 1505, 1626, 1691, 2191
DpnII GATC 9 cut(s) 645, 814, 1009, 1032, 1087, 1503, 1624, 1689, 2189
DraIII CACNNNGTG 1 cut(s) 1501
EaeI YGGCCR 4 cut(s) 177, 373, 531, 729
Eam1104I CTCTTC 2 cut(s) 857, 1227
EarI CTCTTC 2 cut(s) 857, 1227
EciI GGCGGA 1 cut(s) 2072
Ecl136II GAGCTC 3 cut(s) 349, 1153, 1562
Eco105I TACGTA 1 cut(s) 664
Eco130I CCWWGG 3 cut(s) 479, 732, 1636
Eco24I GRGCYC 3 cut(s) 351, 1155, 1564
Eco31I GGTCTC 1 cut(s) 391
Eco47I GGWCC 3 cut(s) 11, 459, 704
Eco53kI GAGCTC 3 cut(s) 349, 1153, 1562
Eco57I CTGAAG 1 cut(s) 165
Eco81I CCTNAGG 1 cut(s) 219
Eco88I CYCGRG 2 cut(s) 836, 932
EcoICRI GAGCTC 3 cut(s) 349, 1153, 1562
EcoNI CCTNNNNNAGG 2 cut(s) 63, 711
EcoO109I RGGNCCY 1 cut(s) 100
EcoRII CCWGG 4 cut(s) 533, 561, 1023, 1179
EcoT14I CCWWGG 3 cut(s) 479, 732, 1636
EcoT22I ATGCAT 1 cut(s) 1971
EcoT38I GRGCYC 3 cut(s) 351, 1155, 1564
ErhI CCWWGG 3 cut(s) 479, 732, 1636
FaeI CATG 8 cut(s) 99, 483, 547, 1165, 1682, 1744, 2165, 2196
FaqI GGGAC 7 cut(s) 144, 236, 237, 768, 1293, 1555, 2153
FatI CATG 8 cut(s) 95, 479, 543, 1161, 1678, 1740, 2161, 2192
FauI CCCGC 1 cut(s) 1992
FblI GTMKAC 2 cut(s) 337, 1707
Fnu4HI GCNGC 5 cut(s) 376, 501, 674, 1001, 1345
FokI GGATG 7 cut(s) 35, 152, 1157, 1247, 1336, 1737, 1978
FriOI GRGCYC 3 cut(s) 351, 1155, 1564
Fsp4HI GCNGC 5 cut(s) 376, 501, 674, 1001, 1345
FspBI CTAG 6 cut(s) 677, 858, 1211, 1637, 1724, 2084
GlaI GCGC 4 cut(s) 245, 1142, 1409, 1411
GluI GCNGC 5 cut(s) 376, 501, 674, 1001, 1345
GsuI CTGGAG 1 cut(s) 2029
HaeIII GGCC 8 cut(s) 102, 179, 375, 533, 538, 673, 731, 1166
HapII CCGG 1 cut(s) 702
HgaI GACGC 1 cut(s) 146
HhaI GCGC 4 cut(s) 246, 1143, 1410, 1412
Hin1II CATG 8 cut(s) 99, 483, 547, 1165, 1682, 1744, 2165, 2196
Hin6I GCGC 4 cut(s) 244, 1141, 1408, 1410
HinP1I GCGC 4 cut(s) 244, 1141, 1408, 1410
HincII GTYRAC 1 cut(s) 1339
HindII GTYRAC 1 cut(s) 1339
HindIII AAGCTT 2 cut(s) 306, 921
HinfI GANTC 9 cut(s) 28, 590, 1158, 1284, 1381, 1614, 1632, 1747, 1979
HpaI GTTAAC 1 cut(s) 1339
HpaII CCGG 1 cut(s) 702
HphI GGTGA 3 cut(s) 1279, 1556, 2015
Hpy166II GTNNAC 6 cut(s) 338, 1204, 1339, 1555, 1708, 1762
Hpy188I TCNGA 5 cut(s) 46, 276, 1157, 1613, 2127
Hpy188III TCNNGA 9 cut(s) 34, 238, 352, 544, 868, 1013, 1976, 2109, 2162
Hpy8I GTNNAC 6 cut(s) 338, 1204, 1339, 1555, 1708, 1762
Hpy99I CGWCG 1 cut(s) 1271
HpyAV CCTTC 4 cut(s) 140, 241, 298, 1483
HpyCH4III ACNGT 4 cut(s) 1771, 1779, 1826, 2206
HpyCH4IV ACGT 3 cut(s) 663, 916, 1206
HpyF10VI GCNNNNNNNGC 7 cut(s) 305, 728, 997, 1052, 1138, 1253, 1341
HpyF3I CTNAG 8 cut(s) 219, 638, 718, 963, 1004, 1105, 1606, 1696
HpySE526I ACGT 3 cut(s) 663, 916, 1206
Hsp92II CATG 8 cut(s) 99, 483, 547, 1165, 1682, 1744, 2165, 2196
HspAI GCGC 4 cut(s) 244, 1141, 1408, 1410
KspAI GTTAAC 1 cut(s) 1339
Kzo9I GATC 9 cut(s) 645, 814, 1009, 1032, 1087, 1503, 1624, 1689, 2189
LmnI GCTCC 4 cut(s) 323, 875, 1158, 1904
Lsp1109I GCAGC 3 cut(s) 512, 987, 1356
LweI GCATC 9 cut(s) 78, 130, 231, 397, 966, 1179, 1702, 1956, 1978
MaeI CTAG 6 cut(s) 677, 858, 1211, 1637, 1724, 2084
MaeII ACGT 3 cut(s) 663, 916, 1206
MaeIII GTNAC 4 cut(s) 781, 1060, 1826, 2003
MalI GATC 9 cut(s) 647, 816, 1011, 1034, 1089, 1505, 1626, 1691, 2191
MbiI CCGCTC 1 cut(s) 1870
MboI GATC 9 cut(s) 645, 814, 1009, 1032, 1087, 1503, 1624, 1689, 2189
MflI RGATCY 1 cut(s) 645
MhlI GDGCHC 7 cut(s) 81, 351, 933, 1155, 1564, 2021, 2072
MlsI TGGCCA 3 cut(s) 179, 533, 731
MluNI TGGCCA 3 cut(s) 179, 533, 731
MlyI GAGTC 4 cut(s) 599, 1390, 1756, 1973
MmeI TCCRAC 6 cut(s) 1377, 1383, 1444, 1472, 1591, 2105
Mox20I TGGCCA 3 cut(s) 179, 533, 731
Mph1103I ATGCAT 1 cut(s) 1971
MscI TGGCCA 3 cut(s) 179, 533, 731
MseI TTAA 3 cut(s) 1338, 1659, 1766
MslI CAYNNNNRTG 4 cut(s) 74, 422, 1314, 1755
Msp20I TGGCCA 3 cut(s) 179, 533, 731
MspA1I CMGCKG 4 cut(s) 323, 503, 722, 1055
MspI CCGG 1 cut(s) 702
MspR9I CCNGG 4 cut(s) 535, 563, 1025, 1181
MvaI CCWGG 4 cut(s) 535, 563, 1025, 1181
MvnI CGCG 2 cut(s) 1143, 1410
MwoI GCNNNNNNNGC 7 cut(s) 305, 728, 997, 1052, 1138, 1253, 1341
NcoI CCATGG 1 cut(s) 479
NdeII GATC 9 cut(s) 645, 814, 1009, 1032, 1087, 1503, 1624, 1689, 2189
NheI GCTAGC 2 cut(s) 676, 857
NlaIII CATG 8 cut(s) 99, 483, 547, 1165, 1682, 1744, 2165, 2196
NlaIV GGNNCC 5 cut(s) 101, 672, 1540, 1599, 1645
NmeAIII GCCGAG 1 cut(s) 1417
NmuCI GTSAC 4 cut(s) 781, 1060, 1826, 2003
NsiI ATGCAT 1 cut(s) 1971
NspI RCATGY 1 cut(s) 1744
PagI TCATGA 2 cut(s) 543, 2161
PalAI GGCGCGCC 1 cut(s) 1408
PauI GCGCGC 1 cut(s) 1408
PcsI WCGNNNNNNNCGW 1 cut(s) 428
PfeI GAWTC 5 cut(s) 28, 1158, 1284, 1614, 1632
PflMI CCANNNNNTGG 1 cut(s) 2027
PkrI GCNGC 5 cut(s) 377, 502, 675, 1002, 1346
PleI GAGTC 4 cut(s) 598, 1389, 1755, 1973
PpsI GAGTC 4 cut(s) 598, 1389, 1755, 1973
Ppu21I YACGTR 2 cut(s) 664, 917
Psp124BI GAGCTC 3 cut(s) 351, 1155, 1564
Psp6I CCWGG 4 cut(s) 533, 561, 1023, 1179
PspGI CCWGG 4 cut(s) 533, 561, 1023, 1179
PspN4I GGNNCC 5 cut(s) 101, 672, 1540, 1599, 1645
PspPI GGNCC 5 cut(s) 11, 100, 459, 671, 704
PsrI GAACNNNNNNTAC 2 cut(s) 897, 929
PstNI CAGNNNCTG 1 cut(s) 1573
PsuI RGATCY 1 cut(s) 645
PteI GCGCGC 1 cut(s) 1408
PvuII CAGCTG 2 cut(s) 722, 1055
RsaI GTAC 4 cut(s) 492, 1123, 1397, 2082
RsaNI GTAC 4 cut(s) 491, 1122, 1396, 2081
RseI CAYNNNNRTG 4 cut(s) 74, 422, 1314, 1755
SacI GAGCTC 3 cut(s) 351, 1155, 1564
SaqAI TTAA 3 cut(s) 1338, 1659, 1766
SatI GCNGC 5 cut(s) 376, 501, 674, 1001, 1345
Sau3AI GATC 9 cut(s) 645, 814, 1009, 1032, 1087, 1503, 1624, 1689, 2189
Sau96I GGNCC 5 cut(s) 11, 100, 459, 671, 704
ScaI AGTACT 1 cut(s) 492
SchI GAGTC 4 cut(s) 599, 1390, 1756, 1973
ScrFI CCNGG 4 cut(s) 535, 563, 1025, 1181
SduI GDGCHC 7 cut(s) 81, 351, 933, 1155, 1564, 2021, 2072
SfaNI GCATC 9 cut(s) 78, 130, 231, 397, 966, 1179, 1702, 1956, 1978
SgsI GGCGCGCC 1 cut(s) 1408
SinI GGWCC 3 cut(s) 11, 459, 704
SmiMI CAYNNNNRTG 4 cut(s) 74, 422, 1314, 1755
SmlI CTYRAG 4 cut(s) 32, 350, 649, 1378
SmoI CTYRAG 4 cut(s) 32, 350, 649, 1378
SnaBI TACGTA 1 cut(s) 664
SpeI ACTAGT 1 cut(s) 2083
SspI AATATT 1 cut(s) 399
SspMI CTAG 6 cut(s) 677, 858, 1211, 1637, 1724, 2084
SstI GAGCTC 3 cut(s) 351, 1155, 1564
StyD4I CCNGG 4 cut(s) 533, 561, 1023, 1179
StyI CCWWGG 3 cut(s) 479, 732, 1636
TaaI ACNGT 4 cut(s) 1771, 1779, 1826, 2206
TaiI ACGT 3 cut(s) 666, 919, 1209
TaqI TCGA 4 cut(s) 81, 122, 1269, 1745
TaqII GACCGA 1 cut(s) 810
TatI WGTACW 3 cut(s) 490, 1121, 1395
TauI GCSGC 2 cut(s) 378, 676
TfiI GAWTC 5 cut(s) 28, 1158, 1284, 1614, 1632
Tru1I TTAA 3 cut(s) 1338, 1659, 1766
Tru9I TTAA 3 cut(s) 1338, 1659, 1766
TscAI CASTG 5 cut(s) 370, 967, 1831, 2072, 2211
TseFI GTSAC 4 cut(s) 781, 1060, 1826, 2003
TseI GCWGC 3 cut(s) 500, 1000, 1344
Tsp45I GTSAC 4 cut(s) 781, 1060, 1826, 2003
TspDTI ATGAA 5 cut(s) 592, 918, 1416, 2150, 2226
TspGWI ACGGA 2 cut(s) 181, 1636
TspRI CASTG 5 cut(s) 370, 967, 1831, 2072, 2211
Van91I CCANNNNNTGG 1 cut(s) 2027
VpaK11BI GGWCC 3 cut(s) 11, 459, 704
XagI CCTNNNNNAGG 2 cut(s) 63, 711
XapI RAATTY 3 cut(s) 466, 1077, 1100
XceI RCATGY 1 cut(s) 1744
XcmI CCANNNNNNNNNTGG 1 cut(s) 546
XmaJI CCTAGG 1 cut(s) 1636
XmiI GTMKAC 2 cut(s) 337, 1707
XspI CTAG 6 cut(s) 677, 858, 1211, 1637, 1724, 2084
ZrmI AGTACT 1 cut(s) 492
Zsp2I ATGCAT 1 cut(s) 1971
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.