Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0010231

Physical Location & Seq

Genomic Coordinates Reverse (-)

19880854 .. 19884971

Gene Structure 4118 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g26230.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1002 bp

ATGTCAAAACCCTCATCTCGAATCTTCCAAGGTCTCCTCCGCTTCCACCGCCACCAAATCTCCACCACCACTTTCCGCCGCACCTTCCACCACCACTCCAATCCTCCTCCTCCTCCTCCTCCTCGCTCCCCCGCTCCCCCAAAACCGTTTCCCGCCTCCGGGCTCAGATTCTTCTCGTTCAAGCCGGACGCCGGCAATGCGAAGAGAATCTTCGAGAAGCCGCTGGCGGCGGCGTCGTCAACTTTCCACCGGTACCAGGAGGCGCTAGGGTTGCAGGTGGAGGCGTTCTGGAAGAGGAACAATCTGGTGCTGGTCGGAGCTGGAGGAGTTGTGGTTTGCGCCATTCTGTGGAAGATCATGTTTGGGATTGCCAGCACTTTTGTGCACCTTTCGGAGGGGATGGCCAAGTATGGCTTCTTAGCTCTCTCTTCTGCTATGGTCGCTTTCGCCGGTCTTTATCTGCGCTCGAGGTACACAATCAATCCTGATAAAGTATATAGGATTGCCATGACAAAGCTCAATACATCTGCTGGGATTCTTGAGGTCATGGGTGCCCCTCTAACAGGATCAGATCTAAGAGCCTATATAATGTCCGGAGGTGGGTTTCAACTGAAAAAATTCAAGCCAACTCTCAGGAGCAAGCGATGCTTCCTCATTTTCCCAATACGAGGTTCTGAAAGAAAAGGTCTGGTCAATGTTGAAGTAAAGAAGAAGAAAGGCCAGTATGATATGAAGCTATTGGCAGTGGACATTCCCATGGCATCAGGACCCGACCAACGGTTATTCCTGATTGGGGATGAAGAAGAATACAAAGTTGGCGGTGGACTAATATCTGAGCTGAGAGATCCTGTTGTGAAAGCAATGGCTGCAGAGAAGATTTTTGATAATCTTGATCAGATTGAAGACGAGGAGGACGCTGAAAGAGAACGTCTGGAGGCAGAAAGAAAGGATCGTGAAGAAATTGAGAAGCTTGAAAAAGATGGGAAAGATGGGACACAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

334

Amino Acids

37.26

Weight (kDa)

9.62

Isoelectric Point (pI)

45.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010231)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40800 AT2G40800 AT3G56430
fragaria_vesca	FvH4_7g26230
malus_domestica	MD01G1171000.v1.1 MD07G1237400.v1.1
prunus_persica	Prupe.2G266500_v2.0.a1 Prupe.2G266500_v2.0.a1 Prupe.2G266500_v2.0.a1
pyrus_communis	pycom01g18320 pycom07g21370
rosa_chinensis	RchiOBHm_Chr1g0372681
rosa_laevigata	RLG00000026880
rosa_multiflora	Rmu_ssc0000419.1_g000003
rosa_roxburghii	Rroxscaffold_4G00284760
rosa_rugosa	Rorug01G0373800
rosa_samantha	Rh1AG382300 Rh1BG345700 Rh1CG359100 Rh1DG376900
rosa_wichuraiana	Rw1G033630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	265
Acc36I	ACCTGC	1 cut(s)	265
Acc65I	GGTACC	1 cut(s)	252
AccB1I	GGYRCC	2 cut(s)	252, 551
AccB7I	CCANNNNNTGG	1 cut(s)	348
AccBSI	CCGCTC	1 cut(s)	134
AccIII	TCCGGA	1 cut(s)	593
AclWI	GGATC	3 cut(s)	574, 839, 957
AcoI	YGGCCR	1 cut(s)	402
AcsI	RAATTY	1 cut(s)	617
AcyI	GRCGYC	2 cut(s)	189, 233
AfaI	GTAC	2 cut(s)	254, 473
AgeI	ACCGGT	1 cut(s)	249
AgsI	TTSAA	6 cut(s)	181, 608, 622, 701, 902, 974
AjnI	CCWGG	1 cut(s)	255
AjuI	GAANNNNNNNTTGG	6 cut(s)	398, 430, 655, 687, 798, 830
AleI	CACNNNNGTG	1 cut(s)	380
AluBI	AGCT	6 cut(s)	320, 422, 517, 736, 838, 970
AluI	AGCT	6 cut(s)	320, 422, 517, 736, 838, 970
Alw21I	GWGCWC	1 cut(s)	387
Alw26I	GTCTC	1 cut(s)	38
Alw44I	GTGCAC	1 cut(s)	383
AlwI	GGATC	3 cut(s)	574, 839, 957
Ama87I	CYCGRG	1 cut(s)	466
Aor13HI	TCCGGA	1 cut(s)	593
AoxI	GGCC	2 cut(s)	402, 718
ApaLI	GTGCAC	1 cut(s)	383
ApeKI	GCWGC	1 cut(s)	866
ApoI	RAATTY	1 cut(s)	617
AsiGI	ACCGGT	1 cut(s)	249
Asp700I	GAANNNNTTC	1 cut(s)	617
Asp718I	GGTACC	1 cut(s)	252
AspLEI	GCGC	3 cut(s)	265, 341, 465
AspS9I	GGNCC	1 cut(s)	767
AsuC2I	CCSGG	1 cut(s)	160
AvaI	CYCGRG	1 cut(s)	466
AvaII	GGWCC	1 cut(s)	767
BaeGI	GKGCMC	2 cut(s)	387, 556
BalI	TGGCCA	1 cut(s)	404
BanI	GGYRCC	2 cut(s)	252, 551
BanII	GRGCYC	1 cut(s)	165
BbsI	GAAGAC	1 cut(s)	909
Bbv12I	GWGCWC	1 cut(s)	387
BbvI	GCAGC	1 cut(s)	853
BccI	CCATC	3 cut(s)	394, 974, 983
BciT130I	CCWGG	1 cut(s)	257
BclI	TGATCA	1 cut(s)	892
BcnI	CCSGG	1 cut(s)	160
BcoDI	GTCTC	1 cut(s)	38
BfaI	CTAG	1 cut(s)	266
BfmI	CTRYAG	1 cut(s)	867
BfoI	RGCGCY	1 cut(s)	266
BfuAI	ACCTGC	1 cut(s)	265
BglII	AGATCT	1 cut(s)	571
BisI	GCNGC	5 cut(s)	79, 221, 228, 231, 867
BlsI	GCNGC	5 cut(s)	80, 222, 229, 232, 868
Bme1390I	CCNGG	2 cut(s)	160, 257
Bme18I	GGWCC	1 cut(s)	767
BmeT110I	CYCGRG	1 cut(s)	466
BmgT120I	GGNCC	1 cut(s)	767
BmiI	GGNNCC	3 cut(s)	254, 553, 769
BmrFI	CCNGG	2 cut(s)	160, 257
BmsI	GCATC	2 cut(s)	635, 770
BpiI	GAAGAC	1 cut(s)	909
BpmI	CTGGAG	2 cut(s)	342, 953
BpuEI	CTTGAG	1 cut(s)	560
BpuMI	CCSGG	1 cut(s)	160
BsaHI	GRCGYC	2 cut(s)	189, 233
BsaI	GGTCTC	1 cut(s)	38
BsaJI	CCNNGG	2 cut(s)	28, 756
BsaWI	WCCGGW	2 cut(s)	249, 593
BsaXI	ACNNNNNCTCC	8 cut(s)	44, 74, 80, 110, 315, 318, 345, 348
Bse118I	RCCGGY	3 cut(s)	191, 249, 449
Bse1I	ACTGG	1 cut(s)	721
Bse3DI	GCAATG	2 cut(s)	202, 867
BseAI	TCCGGA	1 cut(s)	593
BseBI	CCWGG	1 cut(s)	257
BseDI	CCNNGG	2 cut(s)	28, 756
BseGI	GGATG	2 cut(s)	405, 802
BseMI	GCAATG	2 cut(s)	202, 867
BseMII	CTCAG	4 cut(s)	178, 646, 825, 830
BseNI	ACTGG	1 cut(s)	721
BseRI	GAGGAG	9 cut(s)	26, 96, 99, 102, 105, 108, 111, 339, 923
BseSI	GKGCMC	2 cut(s)	387, 556
BseXI	GCAGC	1 cut(s)	853
BseYI	CCCAGC	1 cut(s)	530
BshFI	GGCC	2 cut(s)	404, 720
BshNI	GGYRCC	2 cut(s)	252, 551
BshTI	ACCGGT	1 cut(s)	249
BsiHKAI	GWGCWC	1 cut(s)	387
BsiHKCI	CYCGRG	1 cut(s)	466
BsiSI	CCGG	6 cut(s)	159, 185, 192, 250, 450, 594
BsmAI	GTCTC	1 cut(s)	38
BsnI	GGCC	2 cut(s)	404, 720
Bso31I	GGTCTC	1 cut(s)	38
BsoBI	CYCGRG	1 cut(s)	466
Bsp1286I	GDGCHC	3 cut(s)	165, 387, 556
Bsp13I	TCCGGA	1 cut(s)	593
Bsp143I	GATC	6 cut(s)	354, 566, 571, 844, 892, 949
Bsp19I	CCATGG	1 cut(s)	756
BspANI	GGCC	2 cut(s)	404, 720
BspCNI	CTCAG	4 cut(s)	177, 645, 826, 831
BspEI	TCCGGA	1 cut(s)	593
BspLI	GGNNCC	3 cut(s)	254, 553, 769
BspMAI	CTGCAG	1 cut(s)	871
BspMI	ACCTGC	1 cut(s)	265
BspPI	GGATC	3 cut(s)	574, 839, 957
BspT107I	GGYRCC	2 cut(s)	252, 551
BspTNI	GGTCTC	1 cut(s)	38
BsrBI	CCGCTC	1 cut(s)	134
BsrDI	GCAATG	2 cut(s)	202, 867
BsrFI	RCCGGY	3 cut(s)	191, 249, 449
BsrI	ACTGG	1 cut(s)	721
BssAI	RCCGGY	3 cut(s)	191, 249, 449
BssECI	CCNNGG	2 cut(s)	28, 756
BssMI	GATC	6 cut(s)	354, 566, 571, 844, 892, 949
BssNI	GRCGYC	2 cut(s)	189, 233
BssT1I	CCWWGG	2 cut(s)	28, 756
Bst2UI	CCWGG	1 cut(s)	257
Bst4CI	ACNGT	3 cut(s)	147, 780, 999
Bst6I	CTCTTC	3 cut(s)	197, 287, 433
BstACI	GRCGYC	2 cut(s)	189, 233
BstAPI	GCANNNNNTGC	2 cut(s)	645, 866
BstC8I	GCNNGC	4 cut(s)	193, 225, 373, 641
BstDEI	CTNAG	6 cut(s)	164, 418, 575, 632, 834, 839
BstDSI	CCRYGG	1 cut(s)	756
BstENI	CCTNNNNNAGG	2 cut(s)	392, 561
BstF5I	GGATG	2 cut(s)	405, 802
BstH2I	RGCGCY	1 cut(s)	266
BstHHI	GCGC	3 cut(s)	265, 341, 465
BstKTI	GATC	6 cut(s)	357, 569, 574, 847, 895, 952
BstMAI	GTCTC	1 cut(s)	38
BstMBI	GATC	6 cut(s)	354, 566, 571, 844, 892, 949
BstMWI	GCNNNNNNNGC	6 cut(s)	48, 197, 271, 440, 645, 866
BstNI	CCWGG	1 cut(s)	257
BstSCI	CCNGG	2 cut(s)	158, 255
BstSFI	CTRYAG	1 cut(s)	867
BstSLI	GKGCMC	2 cut(s)	387, 556
BstV1I	GCAGC	1 cut(s)	853
BstV2I	GAAGAC	1 cut(s)	909
BstX2I	RGATCY	2 cut(s)	571, 844
BstYI	RGATCY	2 cut(s)	571, 844
BsuRI	GGCC	2 cut(s)	404, 720
BtgI	CCRYGG	1 cut(s)	756
BtgZI	GCGATG	1 cut(s)	658
BtsCI	GGATG	2 cut(s)	405, 802
BtsI	GCAGTG	1 cut(s)	750
BtsIMutI	CAGTG	1 cut(s)	750
BveI	ACCTGC	1 cut(s)	265
Cac8I	GCNNGC	4 cut(s)	193, 225, 373, 641
CfoI	GCGC	3 cut(s)	265, 341, 465
Cfr10I	RCCGGY	3 cut(s)	191, 249, 449
Cfr13I	GGNCC	1 cut(s)	767
CseI	GACGC	3 cut(s)	197, 222, 923
Csp6I	GTAC	2 cut(s)	253, 472
CspAI	ACCGGT	1 cut(s)	249
CviAII	CATG	4 cut(s)	358, 508, 547, 757
CviQI	GTAC	2 cut(s)	253, 472
DdeI	CTNAG	6 cut(s)	164, 418, 575, 632, 834, 839
DpnI	GATC	6 cut(s)	356, 568, 573, 846, 894, 951
DpnII	GATC	6 cut(s)	354, 566, 571, 844, 892, 949
EaeI	YGGCCR	1 cut(s)	402
Eam1104I	CTCTTC	3 cut(s)	197, 287, 433
EarI	CTCTTC	3 cut(s)	197, 287, 433
EciI	GGCGGA	1 cut(s)	65
Eco130I	CCWWGG	2 cut(s)	28, 756
Eco24I	GRGCYC	1 cut(s)	165
Eco31I	GGTCTC	1 cut(s)	38
Eco47I	GGWCC	1 cut(s)	767
Eco88I	CYCGRG	1 cut(s)	466
EcoNI	CCTNNNNNAGG	2 cut(s)	392, 561
EcoO109I	RGGNCCY	1 cut(s)	767
EcoRII	CCWGG	1 cut(s)	255
EcoT14I	CCWWGG	2 cut(s)	28, 756
EcoT38I	GRGCYC	1 cut(s)	165
ErhI	CCWWGG	2 cut(s)	28, 756
FaeI	CATG	4 cut(s)	361, 511, 550, 760
FalI	AAGNNNNNCTT	6 cut(s)	194, 226, 398, 430, 632, 664
FatI	CATG	4 cut(s)	357, 507, 546, 756
FauI	CCCGC	2 cut(s)	139, 160
FbaI	TGATCA	1 cut(s)	892
Fnu4HI	GCNGC	5 cut(s)	79, 221, 228, 231, 867
FokI	GGATG	2 cut(s)	412, 809
FriOI	GRGCYC	1 cut(s)	165
Fsp4HI	GCNGC	5 cut(s)	79, 221, 228, 231, 867
FspBI	CTAG	1 cut(s)	266
GlaI	GCGC	3 cut(s)	264, 340, 464
GluI	GCNGC	5 cut(s)	79, 221, 228, 231, 867
GsaI	CCCAGC	1 cut(s)	534
GsuI	CTGGAG	2 cut(s)	342, 953
HaeII	RGCGCY	1 cut(s)	266
HaeIII	GGCC	2 cut(s)	404, 720
HapII	CCGG	6 cut(s)	159, 185, 192, 250, 450, 594
HgaI	GACGC	3 cut(s)	197, 222, 923
HhaI	GCGC	3 cut(s)	265, 341, 465
Hin1I	GRCGYC	2 cut(s)	189, 233
Hin1II	CATG	4 cut(s)	361, 511, 550, 760
Hin6I	GCGC	3 cut(s)	263, 339, 463
HinP1I	GCGC	3 cut(s)	263, 339, 463
HincII	GTYRAC	1 cut(s)	240
HindII	GTYRAC	1 cut(s)	240
HindIII	AAGCTT	1 cut(s)	968
HinfI	GANTC	4 cut(s)	21, 168, 207, 535
HpaII	CCGG	6 cut(s)	159, 185, 192, 250, 450, 594
Hpy166II	GTNNAC	5 cut(s)	240, 385, 474, 748, 824
Hpy188I	TCNGA	7 cut(s)	167, 317, 394, 571, 676, 835, 897
Hpy8I	GTNNAC	5 cut(s)	240, 385, 474, 748, 824
Hpy99I	CGWCG	1 cut(s)	238
HpyAV	CCTTC	1 cut(s)	94
HpyCH4III	ACNGT	3 cut(s)	147, 780, 999
HpyCH4IV	ACGT	1 cut(s)	928
HpyCH4V	TGCA	3 cut(s)	274, 385, 869
HpyF10VI	GCNNNNNNNGC	6 cut(s)	48, 197, 271, 440, 645, 866
HpyF3I	CTNAG	6 cut(s)	164, 418, 575, 632, 834, 839
HpySE526I	ACGT	1 cut(s)	928
Hsp92I	GRCGYC	2 cut(s)	189, 233
Hsp92II	CATG	4 cut(s)	361, 511, 550, 760
HspAI	GCGC	3 cut(s)	263, 339, 463
Kpn2I	TCCGGA	1 cut(s)	593
KpnI	GGTACC	1 cut(s)	256
KroI	GCCGGC	1 cut(s)	191
KroNI	GCCGGC	1 cut(s)	193
Ksp22I	TGATCA	1 cut(s)	892
Kzo9I	GATC	6 cut(s)	354, 566, 571, 844, 892, 949
LmnI	GCTCC	4 cut(s)	131, 139, 317, 636
Lsp1109I	GCAGC	1 cut(s)	853
LweI	GCATC	2 cut(s)	635, 770
MaeI	CTAG	1 cut(s)	266
MaeII	ACGT	1 cut(s)	928
MalI	GATC	6 cut(s)	356, 568, 573, 846, 894, 951
MbiI	CCGCTC	1 cut(s)	134
MboI	GATC	6 cut(s)	354, 566, 571, 844, 892, 949
MflI	RGATCY	2 cut(s)	571, 844
MhlI	GDGCHC	3 cut(s)	165, 387, 556
MlsI	TGGCCA	1 cut(s)	404
MluCI	AATT	2 cut(s)	617, 960
MluNI	TGGCCA	1 cut(s)	404
MmeI	TCCRAC	1 cut(s)	295
Mox20I	TGGCCA	1 cut(s)	404
MroI	TCCGGA	1 cut(s)	593
MroNI	GCCGGC	1 cut(s)	191
MroXI	GAANNNNTTC	1 cut(s)	617
MscI	TGGCCA	1 cut(s)	404
MslI	CAYNNNNRTG	2 cut(s)	380, 755
Msp20I	TGGCCA	1 cut(s)	404
MspA1I	CMGCKG	1 cut(s)	223
MspI	CCGG	6 cut(s)	159, 185, 192, 250, 450, 594
MspR9I	CCNGG	2 cut(s)	160, 257
MvaI	CCWGG	1 cut(s)	257
MwoI	GCNNNNNNNGC	6 cut(s)	48, 197, 271, 440, 645, 866
NaeI	GCCGGC	1 cut(s)	193
NciI	CCSGG	1 cut(s)	160
NcoI	CCATGG	1 cut(s)	756
NdeII	GATC	6 cut(s)	354, 566, 571, 844, 892, 949
NgoMIV	GCCGGC	1 cut(s)	191
NlaIII	CATG	4 cut(s)	361, 511, 550, 760
NlaIV	GGNNCC	3 cut(s)	254, 553, 769
OliI	CACNNNNGTG	1 cut(s)	380
PaeR7I	CTCGAG	1 cut(s)	466
PaqCI	CACCTGC	1 cut(s)	265
PdiI	GCCGGC	1 cut(s)	193
PdmI	GAANNNNTTC	1 cut(s)	617
PfeI	GAWTC	4 cut(s)	21, 168, 207, 535
PflMI	CCANNNNNTGG	1 cut(s)	348
PinAI	ACCGGT	1 cut(s)	249
PkrI	GCNGC	5 cut(s)	80, 222, 229, 232, 868
PpuMI	RGGWCCY	1 cut(s)	767
Psp5II	RGGWCCY	1 cut(s)	767
Psp6I	CCWGG	1 cut(s)	255
PspFI	CCCAGC	1 cut(s)	530
PspGI	CCWGG	1 cut(s)	255
PspN4I	GGNNCC	3 cut(s)	254, 553, 769
PspPI	GGNCC	1 cut(s)	767
PspPPI	RGGWCCY	1 cut(s)	767
PspXI	VCTCGAGB	1 cut(s)	466
PstI	CTGCAG	1 cut(s)	871
PsuI	RGATCY	2 cut(s)	571, 844
RsaI	GTAC	2 cut(s)	254, 473
RsaNI	GTAC	2 cut(s)	253, 472
RseI	CAYNNNNRTG	2 cut(s)	380, 755
SatI	GCNGC	5 cut(s)	79, 221, 228, 231, 867
Sau3AI	GATC	6 cut(s)	354, 566, 571, 844, 892, 949
Sau96I	GGNCC	1 cut(s)	767
ScrFI	CCNGG	2 cut(s)	160, 257
SduI	GDGCHC	3 cut(s)	165, 387, 556
SfaNI	GCATC	2 cut(s)	635, 770
SfcI	CTRYAG	1 cut(s)	867
Sfr274I	CTCGAG	1 cut(s)	466
SinI	GGWCC	1 cut(s)	767
SlaI	CTCGAG	1 cut(s)	466
SmiMI	CAYNNNNRTG	2 cut(s)	380, 755
SmlI	CTYRAG	2 cut(s)	466, 539
SmoI	CTYRAG	2 cut(s)	466, 539
Sse9I	AATT	2 cut(s)	617, 960
SspMI	CTAG	1 cut(s)	266
StyD4I	CCNGG	2 cut(s)	158, 255
StyI	CCWWGG	2 cut(s)	28, 756
TaaI	ACNGT	3 cut(s)	147, 780, 999
TaiI	ACGT	1 cut(s)	931
TaqI	TCGA	3 cut(s)	19, 213, 467
TasI	AATT	2 cut(s)	617, 960
TauI	GCSGC	4 cut(s)	81, 223, 230, 233
TfiI	GAWTC	4 cut(s)	21, 168, 207, 535
TscAI	CASTG	1 cut(s)	750
TseI	GCWGC	1 cut(s)	866
TspDTI	ATGAA	2 cut(s)	746, 813
TspRI	CASTG	1 cut(s)	750
Van91I	CCANNNNNTGG	1 cut(s)	348
VneI	GTGCAC	1 cut(s)	383
VpaK11BI	GGWCC	1 cut(s)	767
XagI	CCTNNNNNAGG	2 cut(s)	392, 561
XapI	RAATTY	1 cut(s)	617
XhoI	CTCGAG	1 cut(s)	466
XmnI	GAANNNNTTC	1 cut(s)	617
XspI	CTAG	1 cut(s)	266

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.