Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0010231

Physical Location & Seq

Genomic Coordinates Reverse (-)

27284179 .. 27286802

Gene Structure 2624 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G266500.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1044 bp

ATGTCAAAACCCTCGTCTCGAATCATCCAAGGTCTGCTCAGATTTCACCACAATCAAATCGCAAAACCCTCGTCCCCACTCACCAGTTCCAGGAGGACCTACCACTCCAACAATGGGCCTCTTCCCCAATTCCCCTCTCACCCAAAACCAGTCGTCGGCGGCGGTGGCAGCTCCTCCGGGCCGGGGCTGGGCCTAGGCCTTGGCCTGAGGTTCTTCTCCTTCAAGCCACCGAATTTCAGCAAAGTCAATGCGAAGAAGGTGTTCGATAAGCCGCTCTCCGCCGCCACCTCGGCTTTCTCGCGGTACCAGGAGGCCATAGGGTTGCAGATTGAGGCGTTCTGGAAGAGGAACAATCTGGTGCTCTTGGGCGTTGGAGCACTAGTGGTGTGTGCTTTGCTATGGAGGGTCATGTTTGGGATTGCTAGCACCTTCGTTGGACTCTCTGAAGGGATGGCCAAGTATGGCTTTCTTGCCCTTTCTTCTGCCATTGTCGCCTTCGCTGGCCTTCATATCCGCTCAAGATTCACAATCAATCCTGATAAAGTTTATAGAATTGCCATGAGGAGGCTTAACACTTCTGCTGGGATTCTTGAGGTTATGGGTGCCCCTCTCTCAGGATCAGACCTAAGAGCCTATGTCATGTCCGGAGGTGGGGTTACACTAAAGAAGTTCAAGCCAACTTTTAGGAGCAAGCGGTGTTTCCTCATTTTCCCAGTACGAGGCTCTGAGAGAAAGGGTCTGGTCAGTGTCGAAGTAAAGAAGAAAAAAGGCCAGTATGATATGAAGCTACTGGCAGTTGACATTCCCATGGCATCAGGGCCTGACCAGCGCTTATTTCTGATTGGTGATGAAGAAGAGTACAAAGTTGGTGGTGGACTGATAGCTGAGCTGAGAGATCCGGTTGTGAAAGCAATGGCTGCAACCAAGGAGTTTGATAGTCTTGATCAGATTGAAGAAGAGGAGGATGCTGAAAGAGAACTTCAGGAGGCAGAAAGAAAGCACCGCGAAGAAATTGAGAAGCTTGAAAAGGATGGGTCACAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

348

Amino Acids

38.08

Weight (kDa)

9.75

Isoelectric Point (pI)

49.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010231)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40800 AT2G40800 AT3G56430
fragaria_vesca	FvH4_7g26230
malus_domestica	MD01G1171000.v1.1 MD07G1237400.v1.1
prunus_persica	Prupe.2G266500_v2.0.a1 Prupe.2G266500_v2.0.a1 Prupe.2G266500_v2.0.a1
pyrus_communis	pycom01g18320 pycom07g21370
rosa_chinensis	RchiOBHm_Chr1g0372681
rosa_laevigata	RLG00000026880
rosa_multiflora	Rmu_ssc0000419.1_g000003
rosa_roxburghii	Rroxscaffold_4G00284760
rosa_rugosa	Rorug01G0373800
rosa_samantha	Rh1AG382300 Rh1BG345700 Rh1CG359100 Rh1DG376900
rosa_wichuraiana	Rw1G033630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	303
AccB1I	GGYRCC	2 cut(s)	303, 602
AccBSI	CCGCTC	2 cut(s)	274, 516
AccII	CGCG	2 cut(s)	301, 1005
AccIII	TCCGGA	1 cut(s)	644
AciI	CCGC	9 cut(s)	159, 162, 272, 279, 282, 301, 514, 694, 1003
AclWI	GGATC	2 cut(s)	625, 890
AcoI	YGGCCR	1 cut(s)	453
AcsI	RAATTY	1 cut(s)	232
AcuI	CTGAAG	2 cut(s)	465, 965
AfaI	GTAC	3 cut(s)	305, 717, 860
AfeI	AGCGCT	1 cut(s)	830
AfiI	CCNNNNNNNGG	9 cut(s)	90, 114, 155, 183, 188, 564, 614, 651, 719
AgsI	TTSAA	4 cut(s)	223, 673, 953, 1025
AhlI	ACTAGT	1 cut(s)	379
AjnI	CCWGG	2 cut(s)	89, 306
AluBI	AGCT	5 cut(s)	171, 787, 884, 889, 1021
AluI	AGCT	5 cut(s)	171, 787, 884, 889, 1021
Alw21I	GWGCWC	2 cut(s)	363, 379
Alw26I	GTCTC	1 cut(s)	21
AlwI	GGATC	2 cut(s)	625, 890
AlwNI	CAGNNNCTG	1 cut(s)	821
Aor13HI	TCCGGA	1 cut(s)	644
Aor51HI	AGCGCT	1 cut(s)	830
ApeKI	GCWGC	2 cut(s)	168, 917
ApoI	RAATTY	1 cut(s)	232
ArsI	GACNNNNNNTTYG	3 cut(s)	31, 56, 88
Asp700I	GAANNNNTTC	1 cut(s)	260
Asp718I	GGTACC	1 cut(s)	303
AspA2I	CCTAGG	1 cut(s)	193
AspLEI	GCGC	1 cut(s)	831
AspS9I	GGNCC	5 cut(s)	96, 116, 179, 190, 818
AsuC2I	CCSGG	2 cut(s)	178, 183
AsuHPI	GGTGA	4 cut(s)	38, 73, 131, 857
AsuNHI	GCTAGC	1 cut(s)	422
AvaII	GGWCC	1 cut(s)	96
AvrII	CCTAGG	1 cut(s)	193
AxyI	CCTNAGG	1 cut(s)	206
BaeGI	GKGCMC	1 cut(s)	607
BalI	TGGCCA	1 cut(s)	455
BanI	GGYRCC	2 cut(s)	303, 602
Bbv12I	GWGCWC	2 cut(s)	363, 379
BbvI	GCAGC	2 cut(s)	180, 904
BccI	CCATC	2 cut(s)	445, 1025
BcgI	CGANNNNNNTGC	2 cut(s)	51, 85
BciT130I	CCWGG	2 cut(s)	91, 308
BclI	TGATCA	1 cut(s)	943
BcnI	CCSGG	2 cut(s)	178, 183
BcoDI	GTCTC	1 cut(s)	21
BcuI	ACTAGT	1 cut(s)	379
BfaI	CTAG	3 cut(s)	194, 380, 423
BfoI	RGCGCY	1 cut(s)	832
BglI	GCCNNNNNGGC	1 cut(s)	290
BisI	GCNGC	5 cut(s)	160, 169, 272, 282, 918
BlnI	CCTAGG	1 cut(s)	193
BlpI	GCTNAGC	1 cut(s)	885
BlsI	GCNGC	5 cut(s)	161, 170, 273, 283, 919
Bme1390I	CCNGG	4 cut(s)	91, 178, 183, 308
Bme18I	GGWCC	1 cut(s)	96
BmgT120I	GGNCC	5 cut(s)	96, 116, 179, 190, 818
BmiI	GGNNCC	2 cut(s)	305, 604
BmrFI	CCNGG	4 cut(s)	91, 178, 183, 308
BmrI	ACTGGG	1 cut(s)	707
BmsI	GCATC	2 cut(s)	821, 955
BmtI	GCTAGC	1 cut(s)	426
BmuI	ACTGGG	1 cut(s)	707
Bpu1102I	GCTNAGC	1 cut(s)	885
BpuEI	CTTGAG	2 cut(s)	502, 611
BpuMI	CCSGG	2 cut(s)	178, 183
BsaJI	CCNNGG	7 cut(s)	28, 182, 193, 199, 288, 807, 924
BsaWI	WCCGGW	2 cut(s)	644, 898
BsaXI	ACNNNNNCTCC	4 cut(s)	366, 396, 639, 669
Bsc4I	CCNNNNNNNGG	9 cut(s)	90, 114, 155, 183, 188, 564, 614, 651, 719
Bse1I	ACTGG	5 cut(s)	84, 149, 713, 772, 795
Bse21I	CCTNAGG	1 cut(s)	206
Bse3DI	GCAATG	1 cut(s)	918
BseAI	TCCGGA	1 cut(s)	644
BseBI	CCWGG	2 cut(s)	91, 308
BseDI	CCNNGG	7 cut(s)	28, 182, 193, 199, 288, 807, 924
BseGI	GGATG	4 cut(s)	24, 456, 970, 1036
BseLI	CCNNNNNNNGG	9 cut(s)	90, 114, 155, 183, 188, 564, 614, 651, 719
BseMI	GCAATG	1 cut(s)	918
BseMII	CTCAG	6 cut(s)	52, 197, 627, 717, 876, 881
BseNI	ACTGG	5 cut(s)	84, 149, 713, 772, 795
BseRI	GAGGAG	3 cut(s)	163, 577, 974
BseSI	GKGCMC	1 cut(s)	607
BseXI	GCAGC	2 cut(s)	180, 904
BseYI	CCCAGC	2 cut(s)	187, 581
Bsh1236I	CGCG	2 cut(s)	301, 1005
BshNI	GGYRCC	2 cut(s)	303, 602
BsiHKAI	GWGCWC	2 cut(s)	363, 379
BsiSI	CCGG	4 cut(s)	177, 182, 645, 899
BslFI	GGGAC	1 cut(s)	58
BslI	CCNNNNNNNGG	9 cut(s)	90, 114, 155, 183, 188, 564, 614, 651, 719
BsmAI	GTCTC	1 cut(s)	21
BsmBI	CGTCTC	1 cut(s)	21
BsmFI	GGGAC	1 cut(s)	58
Bsp1286I	GDGCHC	3 cut(s)	363, 379, 607
Bsp13I	TCCGGA	1 cut(s)	644
Bsp143I	GATC	3 cut(s)	617, 895, 943
Bsp1720I	GCTNAGC	1 cut(s)	885
Bsp19I	CCATGG	1 cut(s)	807
BspACI	CCGC	9 cut(s)	159, 162, 272, 279, 282, 301, 514, 694, 1003
BspCNI	CTCAG	6 cut(s)	51, 198, 626, 718, 877, 882
BspEI	TCCGGA	1 cut(s)	644
BspFNI	CGCG	2 cut(s)	301, 1005
BspLI	GGNNCC	2 cut(s)	305, 604
BspOI	GCTAGC	1 cut(s)	426
BspPI	GGATC	2 cut(s)	625, 890
BspT107I	GGYRCC	2 cut(s)	303, 602
BsrBI	CCGCTC	2 cut(s)	274, 516
BsrDI	GCAATG	1 cut(s)	918
BsrI	ACTGG	5 cut(s)	84, 149, 713, 772, 795
BssECI	CCNNGG	7 cut(s)	28, 182, 193, 199, 288, 807, 924
BssMI	GATC	3 cut(s)	617, 895, 943
BssT1I	CCWWGG	5 cut(s)	28, 193, 199, 807, 924
Bst2UI	CCWGG	2 cut(s)	91, 308
Bst4CI	ACNGT	1 cut(s)	1041
Bst6I	CTCTTC	4 cut(s)	126, 338, 849, 951
BstAPI	GCANNNNNTGC	1 cut(s)	917
BstC8I	GCNNGC	3 cut(s)	424, 502, 692
BstDEI	CTNAG	7 cut(s)	38, 206, 613, 626, 726, 885, 890
BstDSI	CCRYGG	1 cut(s)	807
BstENI	CCTNNNNNAGG	1 cut(s)	612
BstF5I	GGATG	4 cut(s)	24, 456, 970, 1036
BstFNI	CGCG	2 cut(s)	301, 1005
BstH2I	RGCGCY	1 cut(s)	832
BstHHI	GCGC	1 cut(s)	831
BstKTI	GATC	3 cut(s)	620, 898, 946
BstMAI	GTCTC	1 cut(s)	21
BstMBI	GATC	3 cut(s)	617, 895, 943
BstMWI	GCNNNNNNNGC	6 cut(s)	165, 168, 290, 491, 826, 917
BstNI	CCWGG	2 cut(s)	91, 308
BstSCI	CCNGG	4 cut(s)	89, 176, 181, 306
BstSLI	GKGCMC	1 cut(s)	607
BstUI	CGCG	2 cut(s)	301, 1005
BstV1I	GCAGC	2 cut(s)	180, 904
BstX2I	RGATCY	1 cut(s)	895
BstYI	RGATCY	1 cut(s)	895
Bsu36I	CCTNAGG	1 cut(s)	206
BtgI	CCRYGG	1 cut(s)	807
BtsCI	GGATG	4 cut(s)	24, 456, 970, 1036
BtsIMutI	CAGTG	1 cut(s)	751
Cac8I	GCNNGC	3 cut(s)	424, 502, 692
CaiI	CAGNNNCTG	1 cut(s)	821
CfoI	GCGC	1 cut(s)	831
Cfr13I	GGNCC	5 cut(s)	96, 116, 179, 190, 818
Csp6I	GTAC	3 cut(s)	304, 716, 859
CspCI	CAANNNNNGTGG	2 cut(s)	850, 885
CviAII	CATG	4 cut(s)	409, 559, 640, 808
CviQI	GTAC	3 cut(s)	304, 716, 859
DdeI	CTNAG	7 cut(s)	38, 206, 613, 626, 726, 885, 890
DpnI	GATC	3 cut(s)	619, 897, 945
DpnII	GATC	3 cut(s)	617, 895, 943
EaeI	YGGCCR	1 cut(s)	453
Eam1104I	CTCTTC	4 cut(s)	126, 338, 849, 951
EarI	CTCTTC	4 cut(s)	126, 338, 849, 951
EciI	GGCGGA	1 cut(s)	268
Eco130I	CCWWGG	5 cut(s)	28, 193, 199, 807, 924
Eco147I	AGGCCT	1 cut(s)	198
Eco47I	GGWCC	1 cut(s)	96
Eco47III	AGCGCT	1 cut(s)	830
Eco57I	CTGAAG	2 cut(s)	465, 965
Eco81I	CCTNAGG	1 cut(s)	206
EcoNI	CCTNNNNNAGG	1 cut(s)	612
EcoO109I	RGGNCCY	2 cut(s)	96, 818
EcoRII	CCWGG	2 cut(s)	89, 306
EcoT14I	CCWWGG	5 cut(s)	28, 193, 199, 807, 924
ErhI	CCWWGG	5 cut(s)	28, 193, 199, 807, 924
Esp3I	CGTCTC	1 cut(s)	21
FaeI	CATG	4 cut(s)	412, 562, 643, 811
FalI	AAGNNNNNCTT	2 cut(s)	449, 481
FaqI	GGGAC	1 cut(s)	58
FatI	CATG	4 cut(s)	408, 558, 639, 807
FbaI	TGATCA	1 cut(s)	943
Fnu4HI	GCNGC	5 cut(s)	160, 169, 272, 282, 918
FokI	GGATG	3 cut(s)	11, 463, 977
Fsp4HI	GCNGC	5 cut(s)	160, 169, 272, 282, 918
FspBI	CTAG	3 cut(s)	194, 380, 423
GlaI	GCGC	1 cut(s)	830
GluI	GCNGC	5 cut(s)	160, 169, 272, 282, 918
GsaI	CCCAGC	2 cut(s)	191, 585
HaeII	RGCGCY	1 cut(s)	832
HapII	CCGG	4 cut(s)	177, 182, 645, 899
HhaI	GCGC	1 cut(s)	831
Hin1II	CATG	4 cut(s)	412, 562, 643, 811
Hin6I	GCGC	1 cut(s)	829
HinP1I	GCGC	1 cut(s)	829
HincII	GTYRAC	1 cut(s)	799
HindII	GTYRAC	1 cut(s)	799
HindIII	AAGCTT	1 cut(s)	1019
HinfI	GANTC	4 cut(s)	21, 438, 522, 586
HpaII	CCGG	4 cut(s)	177, 182, 645, 899
HphI	GGTGA	4 cut(s)	38, 73, 131, 857
Hpy166II	GTNNAC	2 cut(s)	799, 875
Hpy188I	TCNGA	6 cut(s)	41, 445, 622, 727, 840, 948
Hpy188III	TCNNGA	9 cut(s)	18, 340, 519, 536, 590, 615, 645, 941, 983
Hpy8I	GTNNAC	2 cut(s)	799, 875
Hpy99I	CGWCG	1 cut(s)	158
HpyAV	CCTTC	6 cut(s)	229, 250, 439, 440, 505, 515
HpyCH4III	ACNGT	1 cut(s)	1041
HpyCH4V	TGCA	2 cut(s)	325, 920
HpyF10VI	GCNNNNNNNGC	6 cut(s)	165, 168, 290, 491, 826, 917
HpyF3I	CTNAG	7 cut(s)	38, 206, 613, 626, 726, 885, 890
Hsp92II	CATG	4 cut(s)	412, 562, 643, 811
HspAI	GCGC	1 cut(s)	829
Kpn2I	TCCGGA	1 cut(s)	644
KpnI	GGTACC	1 cut(s)	307
Ksp22I	TGATCA	1 cut(s)	943
Kzo9I	GATC	3 cut(s)	617, 895, 943
LmnI	GCTCC	3 cut(s)	176, 374, 687
Lsp1109I	GCAGC	2 cut(s)	180, 904
LweI	GCATC	2 cut(s)	821, 955
MaeI	CTAG	3 cut(s)	194, 380, 423
MaeIII	GTNAC	2 cut(s)	655, 1035
MalI	GATC	3 cut(s)	619, 897, 945
MbiI	CCGCTC	2 cut(s)	274, 516
MboI	GATC	3 cut(s)	617, 895, 943
MflI	RGATCY	1 cut(s)	895
MhlI	GDGCHC	3 cut(s)	363, 379, 607
MlsI	TGGCCA	1 cut(s)	455
MluCI	AATT	4 cut(s)	128, 232, 552, 1011
MluNI	TGGCCA	1 cut(s)	455
MlyI	GAGTC	1 cut(s)	432
MmeI	TCCRAC	3 cut(s)	132, 352, 415
Mox20I	TGGCCA	1 cut(s)	455
MroI	TCCGGA	1 cut(s)	644
MroXI	GAANNNNTTC	1 cut(s)	260
MscI	TGGCCA	1 cut(s)	455
MseI	TTAA	1 cut(s)	570
MslI	CAYNNNNRTG	1 cut(s)	806
Msp20I	TGGCCA	1 cut(s)	455
MspI	CCGG	4 cut(s)	177, 182, 645, 899
MspR9I	CCNGG	4 cut(s)	91, 178, 183, 308
MvaI	CCWGG	2 cut(s)	91, 308
MvnI	CGCG	2 cut(s)	301, 1005
MwoI	GCNNNNNNNGC	6 cut(s)	165, 168, 290, 491, 826, 917
NciI	CCSGG	2 cut(s)	178, 183
NcoI	CCATGG	1 cut(s)	807
NdeII	GATC	3 cut(s)	617, 895, 943
NheI	GCTAGC	1 cut(s)	422
NlaIII	CATG	4 cut(s)	412, 562, 643, 811
NlaIV	GGNNCC	2 cut(s)	305, 604
NmeAIII	GCCGAG	1 cut(s)	269
NmuCI	GTSAC	1 cut(s)	1035
PceI	AGGCCT	1 cut(s)	198
PdmI	GAANNNNTTC	1 cut(s)	260
PfeI	GAWTC	3 cut(s)	21, 522, 586
PfoI	TCCNGGA	1 cut(s)	89
PkrI	GCNGC	5 cut(s)	161, 170, 273, 283, 919
PleI	GAGTC	1 cut(s)	432
PpsI	GAGTC	1 cut(s)	432
PpuMI	RGGWCCY	1 cut(s)	96
Psp5II	RGGWCCY	1 cut(s)	96
Psp6I	CCWGG	2 cut(s)	89, 306
PspFI	CCCAGC	2 cut(s)	187, 581
PspGI	CCWGG	2 cut(s)	89, 306
PspN4I	GGNNCC	2 cut(s)	305, 604
PspPI	GGNCC	5 cut(s)	96, 116, 179, 190, 818
PspPPI	RGGWCCY	1 cut(s)	96
PstNI	CAGNNNCTG	1 cut(s)	821
PsuI	RGATCY	1 cut(s)	895
RsaI	GTAC	3 cut(s)	305, 717, 860
RsaNI	GTAC	3 cut(s)	304, 716, 859
RseI	CAYNNNNRTG	1 cut(s)	806
SaqAI	TTAA	1 cut(s)	570
SatI	GCNGC	5 cut(s)	160, 169, 272, 282, 918
Sau3AI	GATC	3 cut(s)	617, 895, 943
Sau96I	GGNCC	5 cut(s)	96, 116, 179, 190, 818
SchI	GAGTC	1 cut(s)	432
ScrFI	CCNGG	4 cut(s)	91, 178, 183, 308
SduI	GDGCHC	3 cut(s)	363, 379, 607
SfaNI	GCATC	2 cut(s)	821, 955
SinI	GGWCC	1 cut(s)	96
SmiMI	CAYNNNNRTG	1 cut(s)	806
SmlI	CTYRAG	2 cut(s)	517, 590
SmoI	CTYRAG	2 cut(s)	517, 590
SpeI	ACTAGT	1 cut(s)	379
Sse9I	AATT	4 cut(s)	128, 232, 552, 1011
SseBI	AGGCCT	1 cut(s)	198
SsiI	CCGC	9 cut(s)	159, 162, 272, 279, 282, 301, 514, 694, 1003
SspMI	CTAG	3 cut(s)	194, 380, 423
StuI	AGGCCT	1 cut(s)	198
StyD4I	CCNGG	4 cut(s)	89, 176, 181, 306
StyI	CCWWGG	5 cut(s)	28, 193, 199, 807, 924
TaaI	ACNGT	1 cut(s)	1041
TaqI	TCGA	3 cut(s)	19, 264, 750
TasI	AATT	4 cut(s)	128, 232, 552, 1011
TatI	WGTACW	1 cut(s)	858
TauI	GCSGC	3 cut(s)	162, 274, 284
TfiI	GAWTC	3 cut(s)	21, 522, 586
Tru1I	TTAA	1 cut(s)	570
Tru9I	TTAA	1 cut(s)	570
TscAI	CASTG	1 cut(s)	751
TseFI	GTSAC	1 cut(s)	1035
TseI	GCWGC	2 cut(s)	168, 917
Tsp45I	GTSAC	1 cut(s)	1035
TspDTI	ATGAA	3 cut(s)	497, 797, 864
TspRI	CASTG	1 cut(s)	751
VpaK11BI	GGWCC	1 cut(s)	96
XagI	CCTNNNNNAGG	1 cut(s)	612
XapI	RAATTY	1 cut(s)	232
XcmI	CCANNNNNNNNNTGG	1 cut(s)	110
XmaJI	CCTAGG	1 cut(s)	193
XmnI	GAANNNNTTC	1 cut(s)	260
XspI	CTAG	3 cut(s)	194, 380, 423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.