Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0004096

Physical Location & Seq

Genomic Coordinates Forward (+)

21481073 .. 21487266

Gene Structure 6194 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g29060.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGGTGCCTTCACGGGTGGCTGGAGGATTAACGCAATCTTCATCGAGTTCTGGGATTTTCTTCCAAGGGGATGGGCAGTCTCAGTCTGTAGTTAACTCTCACTTGAGCTCATCTTTCGGGAACTCTTCTAATTCAATTCCTGGAACTGGGCGTTCAAATTTGGGTCCGGTTTCTGGGGATATGAACAATGCAGTTTTAAGCAGTGTGGCGAATTCAGGTCCAAGTGTTGGGGCAAGTTCTTTGGTCACAGATGCAAACTCTGTACTTTCAGGAGGTCCCCATTTGCAGAGAAGTGCAAGCATCAATAACGAGTCCTACTTACGCTTACCAGCTTCCCCTATGTCATTCTCGTCGAACAATATTAGCATGTCAGGATCATCAATTATGGATGGCTCTTCTGTAGTGCAACAGAATTCTCAGCATGATCAGAATTCTCAACAACTTCAGCAGGGTCAGCAGCACCAGCACCCGCGTCAGCAAGGGGCATCTAGTGTTACATCCTTACCCACATCCCAAACCGGCCAAGTTCCCCTTCCCATGGGAGCACGTGTCCCTGGAACTTTCATTCAAGATCCAAATAATTTAGCCCATGTCCAGAAGAAACCGCGATTGGATATCAAGCAGGAAGAAATTATGCAGCAGCAGGTTTTACAGCAACTACTGCAAAGACAAGATTCCATGCAGTTCCAAGGACGGAATCCACAGATACAAGCCTTGATTCAACAGCAGAGACTACGGCAACAGCACCAGCAACAGCAACAAATTTTGCAGTCCATGCCTCAATTGCAGAGAGCACATATGCAGCAACAGCAGCAACAGCAACAGCAACAGCAACAGCAGTTGCAATTGAGACAGCAACTTCAACAGCAAGCTCTGCAGCCAGCAGCTTCCATTAAACGTCCATATGATGGTGGTGTTTGTGCTCGTAGGCTGATGCAGTATCTATATCATCAGCGGCAACGACCAGCTGACAATAGTATTGCATATTGGAGGAAGTTTGTGACAGAGTATTACTCTCCTCGTGCTAAAAAGAGATGGTGCCTGTCATTATATGACAATGTTGGGCATCATGCGCTTGGTGTTTTCCCTCAGGCTTCTATGGATGCATGGCAGTGTGATATTTGTGGATCTAAATCTGGAAGAGGCTTCGAGGCGACCTTTGAAGTACTCCCTAGACTTAATGAGATCAAATTTGGCAGTGGAGTCATCGATGAGCTTTTGTTTCTAGACTTGCCAAGGGAATGCAGATTTCCTTCTGGTGTAATGATGCTGGAATATGGAAAAGCAGTTCAAGAGAGTGTATACGAGCAACTTCGTGTTGTTCGTGAGGGTCAGCTTCGTATCGTGTTTACACAAGATTTAAAGATATTGTCTTGGGAATTTTGTGCACGACGCCATGAAGAGCTTCTTCCTCGTAGACTTGTTGCTCCACAGGTCCATCAGTTGGTTCAGGTTGCGCAGAAGTGCCAGAGTACGATTGCTGAAAGTGGATCTGAAGGGGTTTCTCAGCAGGACCTACAAACAAATAGCAATTTGGTTTTGACAGCTGGGCGGCAGCTCGCAAAGAGTTTGGAGTTGCAGTCACTGAATGACTTGGGATTTTCTAAAAGATATGTGAGGTGTTTGCAGATATCAGAGGTTGTGAACAGCATGAAGGATTTGATCGACTTCTGCCGGGAAAGCAAAGTTGGCCCAATTGCTTTAATCGAGTCATTCCATGAGTTAATCATCTTCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001666 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009909 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010044 GO:0010154 GO:0010243 GO:0010272 GO:0014070 GO:0022414 GO:0032501 GO:0032502 GO:0033554 GO:0035670 GO:0036293 GO:0042221 GO:0042493 GO:0043207 GO:0046677 GO:0046898 GO:0046982 GO:0046983 GO:0047484 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048519 GO:0048580 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060090 GO:0060992 GO:0061458 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0080134 GO:0090567 GO:0097159 GO:0097305 GO:0099402 GO:1901000 GO:1901001 GO:1901363 GO:1901654 GO:1901698 GO:1901700 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LIM_bind

Protein Analysis

580

Amino Acids

64.71

Weight (kDa)

9.09

Isoelectric Point (pI)

67.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LIM_bind	PF01803	310 - 570	4.5e-65	LIM-domain binding protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004096)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62090 AT5G62090 AT5G62090
fragaria_vesca	FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060
malus_domestica	MD01G1197300.v1.1 MD07G1264600.v1.1
prunus_persica	Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1
pyrus_communis	pycom01g20770 pycom07g24320
rosa_chinensis	RchiOBHm_Chr1g0376781
rosa_laevigata	RLG00000026560 RLG00000026570 RLG00000026571
rosa_multiflora	Rmu_sc0002113.1_g000009
rosa_roxburghii	Rroxscaffold_4G00281740
rosa_rugosa	Rorug01G0398100 Rorug01G0398200.1 Rorug01G0398300 Rorug01G0398300
rosa_samantha	Rh1AG415500 Rh1BG375000 Rh1CG388800 Rh1DG405600
rosa_wichuraiana	Rw1G036450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1458
Acc36I	ACCTGC	1 cut(s)	634
AccB1I	GGYRCC	2 cut(s)	4, 1038
AccB7I	CCANNNNNTGG	3 cut(s)	227, 908, 1444
AccI	GTMKAC	2 cut(s)	1302, 1417
AccII	CGCG	2 cut(s)	472, 607
AciI	CCGC	4 cut(s)	470, 605, 955, 1552
AclWI	GGATC	4 cut(s)	382, 566, 1135, 1498
AcoI	YGGCCR	1 cut(s)	520
AcsI	RAATTY	7 cut(s)	157, 211, 412, 430, 762, 1190, 1379
AcuI	CTGAAG	2 cut(s)	428, 1515
AcvI	CACGTG	1 cut(s)	548
AcyI	GRCGYC	1 cut(s)	1393
AfaI	GTAC	3 cut(s)	264, 1167, 1474
AfiI	CCNNNNNNNGG	6 cut(s)	146, 173, 227, 538, 908, 1444
AflIII	ACRYGT	1 cut(s)	547
AgsI	TTSAA	7 cut(s)	135, 156, 569, 722, 863, 1163, 1292
AjnI	CCWGG	2 cut(s)	139, 553
AjuI	GAANNNNNNNTTGG	6 cut(s)	516, 548, 593, 625, 1671, 1703
AloI	GAACNNNNNNTCC	2 cut(s)	1272, 1304
Alw21I	GWGCWC	5 cut(s)	110, 547, 796, 925, 1390
Alw26I	GTCTC	3 cut(s)	84, 724, 844
Alw44I	GTGCAC	1 cut(s)	1386
AlwI	GGATC	4 cut(s)	382, 566, 1135, 1498
AlwNI	CAGNNNCTG	1 cut(s)	1585
AoxI	GGCC	2 cut(s)	520, 1690
ApaLI	GTGCAC	1 cut(s)	1386
ApeKI	GCWGC	8 cut(s)	457, 637, 640, 802, 811, 877, 884, 1555
ApoI	RAATTY	7 cut(s)	157, 211, 412, 430, 762, 1190, 1379
Asp700I	GAANNNNTTC	1 cut(s)	1404
AspLEI	GCGC	2 cut(s)	1075, 1459
AspS9I	GGNCC	6 cut(s)	164, 218, 275, 1435, 1513, 1691
AsuC2I	CCSGG	1 cut(s)	1676
AvaII	GGWCC	5 cut(s)	164, 218, 275, 1435, 1513
AxyI	CCTNAGG	1 cut(s)	1089
BaeGI	GKGCMC	1 cut(s)	1390
BanI	GGYRCC	2 cut(s)	4, 1038
BanII	GRGCYC	1 cut(s)	110
BauI	CACGAG	1 cut(s)	1020
BbrPI	CACGTG	1 cut(s)	548
Bbv12I	GWGCWC	5 cut(s)	110, 547, 796, 925, 1390
BbvI	GCAGC	8 cut(s)	469, 649, 652, 814, 823, 889, 896, 1567
BccI	CCATC	5 cut(s)	65, 383, 902, 1029, 1446
BceAI	ACGGC	1 cut(s)	752
BciT130I	CCWGG	2 cut(s)	141, 555
BclI	TGATCA	1 cut(s)	424
BcnI	CCSGG	1 cut(s)	1676
BcoDI	GTCTC	3 cut(s)	84, 724, 844
BfaI	CTAG	3 cut(s)	489, 1173, 1226
BfmI	CTRYAG	3 cut(s)	87, 399, 875
BfuAI	ACCTGC	1 cut(s)	634
BmcAI	AGTACT	1 cut(s)	1167
Bme1390I	CCNGG	3 cut(s)	141, 555, 1676
Bme18I	GGWCC	5 cut(s)	164, 218, 275, 1435, 1513
BmgT120I	GGNCC	6 cut(s)	164, 218, 275, 1435, 1513, 1691
BmiI	GGNNCC	4 cut(s)	6, 165, 277, 1040
BmrFI	CCNGG	3 cut(s)	141, 555, 1676
BmrI	ACTGGG	1 cut(s)	156
BmsI	GCATC	7 cut(s)	241, 309, 494, 924, 1075, 1093, 1257
BmuI	ACTGGG	1 cut(s)	156
BplI	GAGNNNNNCTC	2 cut(s)	998, 1030
BpmI	CTGGAG	1 cut(s)	42
BpuEI	CTTGAG	1 cut(s)	124
BpuMI	CCSGG	1 cut(s)	1676
Bsa29I	ATCGAT	1 cut(s)	1209
BsaAI	YACGTR	1 cut(s)	548
BsaBI	GATNNNNATC	1 cut(s)	1132
BsaHI	GRCGYC	1 cut(s)	1393
BsaJI	CCNNGG	5 cut(s)	64, 537, 553, 688, 1235
BsaWI	WCCGGW	1 cut(s)	166
BsaXI	ACNNNNNCTCC	4 cut(s)	534, 564, 1565, 1595
Bsc4I	CCNNNNNNNGG	6 cut(s)	146, 173, 227, 538, 908, 1444
Bse118I	RCCGGY	1 cut(s)	518
Bse1I	ACTGG	1 cut(s)	151
Bse21I	CCTNAGG	1 cut(s)	1089
Bse8I	GATNNNNATC	1 cut(s)	1132
BseBI	CCWGG	2 cut(s)	141, 555
BseCI	ATCGAT	1 cut(s)	1209
BseDI	CCNNGG	5 cut(s)	64, 537, 553, 688, 1235
BseGI	GGATG	5 cut(s)	76, 394, 497, 509, 1108
BseJI	GATNNNNATC	1 cut(s)	1132
BseLI	CCNNNNNNNGG	6 cut(s)	146, 173, 227, 538, 908, 1444
BseMII	CTCAG	4 cut(s)	95, 431, 1103, 1520
BseNI	ACTGG	1 cut(s)	151
BseRI	GAGGAG	1 cut(s)	1008
BseSI	GKGCMC	1 cut(s)	1390
BseXI	GCAGC	8 cut(s)	469, 649, 652, 814, 823, 889, 896, 1567
BseYI	CCCAGC	1 cut(s)	1547
Bsh1236I	CGCG	2 cut(s)	472, 607
BshFI	GGCC	2 cut(s)	522, 1692
BshNI	GGYRCC	2 cut(s)	4, 1038
BshVI	ATCGAT	1 cut(s)	1209
BsiHKAI	GWGCWC	5 cut(s)	110, 547, 796, 925, 1390
BsiSI	CCGG	3 cut(s)	167, 519, 1675
BslFI	GGGAC	2 cut(s)	261, 536
BslI	CCNNNNNNNGG	6 cut(s)	146, 173, 227, 538, 908, 1444
BsmAI	GTCTC	3 cut(s)	84, 724, 844
BsmFI	GGGAC	2 cut(s)	261, 536
BsmI	GAATGC	1 cut(s)	1247
BsnI	GGCC	2 cut(s)	522, 1692
Bsp1286I	GDGCHC	5 cut(s)	110, 547, 796, 925, 1390
Bsp143I	GATC	7 cut(s)	374, 424, 571, 1127, 1185, 1490, 1662
Bsp19I	CCATGG	1 cut(s)	537
BspACI	CCGC	4 cut(s)	470, 605, 955, 1552
BspANI	GGCC	2 cut(s)	522, 1692
BspCNI	CTCAG	4 cut(s)	94, 430, 1102, 1519
BspDI	ATCGAT	1 cut(s)	1209
BspFNI	CGCG	2 cut(s)	472, 607
BspLI	GGNNCC	4 cut(s)	6, 165, 277, 1040
BspMAI	CTGCAG	1 cut(s)	879
BspMI	ACCTGC	1 cut(s)	634
BspPI	GGATC	4 cut(s)	382, 566, 1135, 1498
BspQI	GCTCTTC	2 cut(s)	400, 1395
BspT107I	GGYRCC	2 cut(s)	4, 1038
BsrFI	RCCGGY	1 cut(s)	518
BsrI	ACTGG	1 cut(s)	151
BssAI	RCCGGY	1 cut(s)	518
BssECI	CCNNGG	5 cut(s)	64, 537, 553, 688, 1235
BssMI	GATC	7 cut(s)	374, 424, 571, 1127, 1185, 1490, 1662
BssNAI	GTATAC	1 cut(s)	1303
BssNI	GRCGYC	1 cut(s)	1393
BssSI	CACGAG	1 cut(s)	1020
BssT1I	CCWWGG	4 cut(s)	64, 537, 688, 1235
Bst1107I	GTATAC	1 cut(s)	1303
Bst2BI	CACGAG	1 cut(s)	1020
Bst2UI	CCWGG	2 cut(s)	141, 555
Bst6I	CTCTTC	4 cut(s)	130, 400, 1135, 1395
BstACI	GRCGYC	1 cut(s)	1393
BstAPI	GCANNNNNTGC	3 cut(s)	661, 775, 874
BstBAI	YACGTR	1 cut(s)	548
BstC8I	GCNNGC	4 cut(s)	298, 870, 882, 1560
BstDEI	CTNAG	4 cut(s)	81, 417, 1089, 1506
BstDSI	CCRYGG	1 cut(s)	537
BstF5I	GGATG	5 cut(s)	76, 394, 497, 509, 1108
BstFNI	CGCG	2 cut(s)	472, 607
BstHHI	GCGC	2 cut(s)	1075, 1459
BstKTI	GATC	7 cut(s)	377, 427, 574, 1130, 1188, 1493, 1665
BstMAI	GTCTC	3 cut(s)	84, 724, 844
BstMBI	GATC	7 cut(s)	374, 424, 571, 1127, 1185, 1490, 1662
BstNI	CCWGG	2 cut(s)	141, 555
BstNSI	RCATGY	1 cut(s)	370
BstSCI	CCNGG	3 cut(s)	139, 553, 1674
BstSFI	CTRYAG	3 cut(s)	87, 399, 875
BstSLI	GKGCMC	1 cut(s)	1390
BstUI	CGCG	2 cut(s)	472, 607
BstV1I	GCAGC	8 cut(s)	469, 649, 652, 814, 823, 889, 896, 1567
BstX2I	RGATCY	3 cut(s)	571, 1127, 1490
BstXI	CCANNNNNNTGG	1 cut(s)	71
BstYI	RGATCY	3 cut(s)	571, 1127, 1490
BstZ17I	GTATAC	1 cut(s)	1303
Bsu15I	ATCGAT	1 cut(s)	1209
Bsu36I	CCTNAGG	1 cut(s)	1089
BsuRI	GGCC	2 cut(s)	522, 1692
BsuTUI	ATCGAT	1 cut(s)	1209
BtgI	CCRYGG	1 cut(s)	537
BtsCI	GGATG	5 cut(s)	76, 394, 497, 509, 1108
BtsI	GCAGTG	3 cut(s)	208, 1118, 1204
BtsIMutI	CAGTG	4 cut(s)	208, 1118, 1204, 1583
BveI	ACCTGC	1 cut(s)	634
Cac8I	GCNNGC	4 cut(s)	298, 870, 882, 1560
CaiI	CAGNNNCTG	1 cut(s)	1585
CfoI	GCGC	2 cut(s)	1075, 1459
Cfr10I	RCCGGY	1 cut(s)	518
Cfr13I	GGNCC	6 cut(s)	164, 218, 275, 1435, 1513, 1691
ClaI	ATCGAT	1 cut(s)	1209
CseI	GACGC	2 cut(s)	461, 1401
Csp6I	GTAC	3 cut(s)	263, 1166, 1473
CviQI	GTAC	3 cut(s)	263, 1166, 1473
DdeI	CTNAG	4 cut(s)	81, 417, 1089, 1506
DpnI	GATC	7 cut(s)	376, 426, 573, 1129, 1187, 1492, 1664
DpnII	GATC	7 cut(s)	374, 424, 571, 1127, 1185, 1490, 1662
DraI	TTTAAA	1 cut(s)	1362
EaeI	YGGCCR	1 cut(s)	520
Eam1104I	CTCTTC	4 cut(s)	130, 400, 1135, 1395
EarI	CTCTTC	4 cut(s)	130, 400, 1135, 1395
Ecl136II	GAGCTC	1 cut(s)	108
Eco130I	CCWWGG	4 cut(s)	64, 537, 688, 1235
Eco24I	GRGCYC	1 cut(s)	110
Eco32I	GATATC	2 cut(s)	616, 1632
Eco47I	GGWCC	5 cut(s)	164, 218, 275, 1435, 1513
Eco53kI	GAGCTC	1 cut(s)	108
Eco57I	CTGAAG	2 cut(s)	428, 1515
Eco72I	CACGTG	1 cut(s)	548
Eco81I	CCTNAGG	1 cut(s)	1089
EcoICRI	GAGCTC	1 cut(s)	108
EcoO109I	RGGNCCY	2 cut(s)	275, 1513
EcoRI	GAATTC	3 cut(s)	211, 412, 430
EcoRII	CCWGG	2 cut(s)	139, 553
EcoRV	GATATC	2 cut(s)	616, 1632
EcoT14I	CCWWGG	4 cut(s)	64, 537, 688, 1235
EcoT22I	ATGCAT	1 cut(s)	1108
EcoT38I	GRGCYC	1 cut(s)	110
ErhI	CCWWGG	4 cut(s)	64, 537, 688, 1235
FalI	AAGNNNNNCTT	4 cut(s)	516, 548, 1392, 1424
FaqI	GGGAC	2 cut(s)	261, 536
FauI	CCCGC	1 cut(s)	477
FauNDI	CATATG	2 cut(s)	798, 904
FbaI	TGATCA	1 cut(s)	424
FblI	GTMKAC	2 cut(s)	1302, 1417
FokI	GGATG	5 cut(s)	83, 401, 484, 496, 1115
FriOI	GRGCYC	1 cut(s)	110
FspBI	CTAG	3 cut(s)	489, 1173, 1226
FspI	TGCGCA	1 cut(s)	1458
GlaI	GCGC	2 cut(s)	1074, 1458
GsaI	CCCAGC	1 cut(s)	1551
GsuI	CTGGAG	1 cut(s)	42
HaeIII	GGCC	2 cut(s)	522, 1692
HapII	CCGG	3 cut(s)	167, 519, 1675
HgaI	GACGC	2 cut(s)	461, 1401
HhaI	GCGC	2 cut(s)	1075, 1459
Hin1I	GRCGYC	1 cut(s)	1393
Hin6I	GCGC	2 cut(s)	1073, 1457
HinP1I	GCGC	2 cut(s)	1073, 1457
HincII	GTYRAC	1 cut(s)	94
HindII	GTYRAC	1 cut(s)	94
HinfI	GANTC	6 cut(s)	311, 674, 697, 718, 1203, 1709
HpaI	GTTAAC	1 cut(s)	94
HpaII	CCGG	3 cut(s)	167, 519, 1675
Hpy166II	GTNNAC	6 cut(s)	94, 1303, 1350, 1388, 1418, 1645
Hpy188I	TCNGA	3 cut(s)	429, 1495, 1636
Hpy188III	TCNNGA	9 cut(s)	118, 270, 372, 569, 595, 1137, 1226, 1292, 1325
Hpy8I	GTNNAC	6 cut(s)	94, 1303, 1350, 1388, 1418, 1645
Hpy99I	CGWCG	2 cut(s)	355, 1395
HpyAV	CCTTC	5 cut(s)	18, 542, 1263, 1490, 1648
HpyCH4IV	ACGT	2 cut(s)	547, 898
HpyF3I	CTNAG	4 cut(s)	81, 417, 1089, 1506
HpySE526I	ACGT	2 cut(s)	547, 898
Hsp92I	GRCGYC	1 cut(s)	1393
HspAI	GCGC	2 cut(s)	1073, 1457
Ksp22I	TGATCA	1 cut(s)	424
KspAI	GTTAAC	1 cut(s)	94
Kzo9I	GATC	7 cut(s)	374, 424, 571, 1127, 1185, 1490, 1662
LguI	GCTCTTC	2 cut(s)	400, 1395
LmnI	GCTCC	2 cut(s)	542, 1432
Lsp1109I	GCAGC	8 cut(s)	469, 649, 652, 814, 823, 889, 896, 1567
LweI	GCATC	7 cut(s)	241, 309, 494, 924, 1075, 1093, 1257
MaeI	CTAG	3 cut(s)	489, 1173, 1226
MaeII	ACGT	2 cut(s)	547, 898
MaeIII	GTNAC	4 cut(s)	244, 493, 1000, 1581
MalI	GATC	7 cut(s)	376, 426, 573, 1129, 1187, 1492, 1664
MboI	GATC	7 cut(s)	374, 424, 571, 1127, 1185, 1490, 1662
MfeI	CAATTG	3 cut(s)	782, 845, 1695
MflI	RGATCY	3 cut(s)	571, 1127, 1490
MhlI	GDGCHC	5 cut(s)	110, 547, 796, 925, 1390
MlyI	GAGTC	3 cut(s)	320, 1212, 1718
Mph1103I	ATGCAT	1 cut(s)	1108
MroXI	GAANNNNTTC	1 cut(s)	1404
MseI	TTAA	8 cut(s)	29, 93, 197, 894, 1179, 1361, 1703, 1724
MslI	CAYNNNNRTG	1 cut(s)	1111
MspA1I	CMGCKG	3 cut(s)	955, 968, 1547
MspI	CCGG	3 cut(s)	167, 519, 1675
MspR9I	CCNGG	3 cut(s)	141, 555, 1676
MunI	CAATTG	3 cut(s)	782, 845, 1695
Mva1269I	GAATGC	1 cut(s)	1247
MvaI	CCWGG	2 cut(s)	141, 555
MvnI	CGCG	2 cut(s)	472, 607
NciI	CCSGG	1 cut(s)	1676
NcoI	CCATGG	1 cut(s)	537
NdeI	CATATG	2 cut(s)	798, 904
NdeII	GATC	7 cut(s)	374, 424, 571, 1127, 1185, 1490, 1662
NlaIV	GGNNCC	4 cut(s)	6, 165, 277, 1040
NmuCI	GTSAC	3 cut(s)	244, 1000, 1581
NsbI	TGCGCA	1 cut(s)	1458
NsiI	ATGCAT	1 cut(s)	1108
NspI	RCATGY	1 cut(s)	370
PciSI	GCTCTTC	2 cut(s)	400, 1395
PcsI	WCGNNNNNNNCGW	1 cut(s)	1321
PctI	GAATGC	1 cut(s)	1247
PdmI	GAANNNNTTC	1 cut(s)	1404
PfeI	GAWTC	3 cut(s)	674, 697, 718
PflMI	CCANNNNNTGG	3 cut(s)	227, 908, 1444
PfoI	TCCNGGA	1 cut(s)	139
PleI	GAGTC	3 cut(s)	319, 1211, 1717
PmaCI	CACGTG	1 cut(s)	548
PmlI	CACGTG	1 cut(s)	548
PpsI	GAGTC	3 cut(s)	319, 1211, 1717
Ppu21I	YACGTR	1 cut(s)	548
PpuMI	RGGWCCY	2 cut(s)	275, 1513
Psp124BI	GAGCTC	1 cut(s)	110
Psp5II	RGGWCCY	2 cut(s)	275, 1513
Psp6I	CCWGG	2 cut(s)	139, 553
PspCI	CACGTG	1 cut(s)	548
PspFI	CCCAGC	1 cut(s)	1547
PspGI	CCWGG	2 cut(s)	139, 553
PspN4I	GGNNCC	4 cut(s)	6, 165, 277, 1040
PspPI	GGNCC	6 cut(s)	164, 218, 275, 1435, 1513, 1691
PspPPI	RGGWCCY	2 cut(s)	275, 1513
PstI	CTGCAG	1 cut(s)	879
PstNI	CAGNNNCTG	1 cut(s)	1585
PsuI	RGATCY	3 cut(s)	571, 1127, 1490
PvuII	CAGCTG	2 cut(s)	968, 1547
RsaI	GTAC	3 cut(s)	264, 1167, 1474
RsaNI	GTAC	3 cut(s)	263, 1166, 1473
RseI	CAYNNNNRTG	1 cut(s)	1111
SacI	GAGCTC	1 cut(s)	110
SapI	GCTCTTC	2 cut(s)	400, 1395
SaqAI	TTAA	8 cut(s)	29, 93, 197, 894, 1179, 1361, 1703, 1724
Sau3AI	GATC	7 cut(s)	374, 424, 571, 1127, 1185, 1490, 1662
Sau96I	GGNCC	6 cut(s)	164, 218, 275, 1435, 1513, 1691
ScaI	AGTACT	1 cut(s)	1167
SchI	GAGTC	3 cut(s)	320, 1212, 1718
ScrFI	CCNGG	3 cut(s)	141, 555, 1676
SduI	GDGCHC	5 cut(s)	110, 547, 796, 925, 1390
SfaNI	GCATC	7 cut(s)	241, 309, 494, 924, 1075, 1093, 1257
SfcI	CTRYAG	3 cut(s)	87, 399, 875
SinI	GGWCC	5 cut(s)	164, 218, 275, 1435, 1513
SmiMI	CAYNNNNRTG	1 cut(s)	1111
SmlI	CTYRAG	1 cut(s)	103
SmoI	CTYRAG	1 cut(s)	103
SsiI	CCGC	4 cut(s)	470, 605, 955, 1552
SspI	AATATT	1 cut(s)	361
SspMI	CTAG	3 cut(s)	489, 1173, 1226
SstI	GAGCTC	1 cut(s)	110
StyD4I	CCNGG	3 cut(s)	139, 553, 1674
StyI	CCWWGG	4 cut(s)	64, 537, 688, 1235
TaiI	ACGT	2 cut(s)	550, 901
TaqI	TCGA	6 cut(s)	44, 353, 1149, 1209, 1665, 1707
TatI	WGTACW	2 cut(s)	262, 1165
TauI	GCSGC	2 cut(s)	958, 1555
TfiI	GAWTC	3 cut(s)	674, 697, 718
Tru1I	TTAA	8 cut(s)	29, 93, 197, 894, 1179, 1361, 1703, 1724
Tru9I	TTAA	8 cut(s)	29, 93, 197, 894, 1179, 1361, 1703, 1724
TscAI	CASTG	4 cut(s)	208, 1118, 1204, 1590
TseFI	GTSAC	3 cut(s)	244, 1000, 1581
TseI	GCWGC	8 cut(s)	457, 637, 640, 802, 811, 877, 884, 1555
Tsp45I	GTSAC	3 cut(s)	244, 1000, 1581
TspDTI	ATGAA	5 cut(s)	30, 197, 553, 1413, 1667
TspGWI	ACGGA	1 cut(s)	709
TspRI	CASTG	4 cut(s)	208, 1118, 1204, 1590
Van91I	CCANNNNNTGG	3 cut(s)	227, 908, 1444
VneI	GTGCAC	1 cut(s)	1386
VpaK11BI	GGWCC	5 cut(s)	164, 218, 275, 1435, 1513
XapI	RAATTY	7 cut(s)	157, 211, 412, 430, 762, 1190, 1379
XbaI	TCTAGA	1 cut(s)	1225
XceI	RCATGY	1 cut(s)	370
XmiI	GTMKAC	2 cut(s)	1302, 1417
XmnI	GAANNNNTTC	1 cut(s)	1404
XspI	CTAG	3 cut(s)	489, 1173, 1226
ZrmI	AGTACT	1 cut(s)	1167
Zsp2I	ATGCAT	1 cut(s)	1108

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.