Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0004096

Physical Location & Seq

Genomic Coordinates Forward (+)

28452015 .. 28458293

Gene Structure 6279 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G290500.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2607 bp

ATGGTGCCTTCTCGGGTGGCTGGAGGATTAGCGCAATCTTCATCAAGTTCTGGAATTTTCTTCCAAGGGGATGGGCAGTCTCAGCTTGTAGTTAACTCTCACTTGAGCTCATCTTTCGGGAACTCTTCTAATTCCATTCCTGGAACTGGGCGTTCAAATCTGGGTCCGGTTTCTGGGGACATGAATAATGCAGTTTTGAGCGGTGTGGCAAACTCAGGTCCAAGTGTTGGGGCAAGTTCTTTGGTCACAGATGCGAACTCTGTACTTTCAGGCGGTCCCCATTTGCAGAGAAGTGCAAGCATCAATACAGAGTCATACTTACGCTTACCAGCATCGCCCATGTCGTTCTCATCCAACAACATTAGCATGTCAGGGTCATCGATTATGGATGGGTCTTCCGTAGTGCAACAAAATTCTCAGCATGATCACAACTCTCAACAAATCCAGCAGAATCAGCAGCACCAGCACCCACGGCAGCAAGGGGCTTCTAGTGCTACTTCATTAGCCACTTCTCAAACTGGCCAGGTTTCCCTTCCCATGGGGGCGCGAGTACCTGGAGCTTTTATTCAGGATCCAAATAATTTGGCCCACGTCCAGAAAAAACCCCGGTTGGATATCAAGCAGGAAGATATGTTGCAGCAGCAGGTGTTACAGCAGCTACTGCAAAGGCAGGATCCCATGCAGTTCCAAGGCCGAAATCCACAAATACAAGCCTTGCTTCAGCAGCAGAGATTGCGGCAACAACATCAGATTTTGCAGTCTATGCCTCAACTGCAGAGAGCCCAGTTGCAGCAGCAGCAGCAGCAGCAACAACAACAACAGCAACAACAACAACAACAACATCAGTTGCAGTTGAGACAACTTCAACAACAATCTTTGCAGCCAGTATCTTCCGTTAAGCGCCCCTATGATGGCGGCGTATGTGCTCGTAGACTGATGCAATATCTATATCATCAGCGGCAACGGCCTTCTGACAATAGTATTGCCTATTGGAGGAAGTTTGTGACAGAGTATTACTCACCTCGTGCTAAGAAAAGATGGTGTTTGTCATTATATGATAATGTTGGGCATCATGCACTTGGTGTTTTCCCTCAGGCTGCTATGGATGCGTGGCAATGCGACATTTGCGGTTCTAAATCTGGAAGGGGTTTTGAGGCAACCTTTGAAGTGCTCCCTAGACTTAATGAGATCAAATTTGGTAGTGGAGTCATCGATGAACTTTTGTTTTTGGACTTGCCACGTGAATGTAGATTTCCTTCTGGTGTAATGATGTTGGAGTATGGGAAAGCAGTTCAAGAGAGTGTATACGAGCAACTTCGTGTTGTTCGGGAGGGTCAGCTTCGTATAATTTTTACGCAAGATTTGAAGATATTGTCTTGGGAATTCTGTGCACGGCGCCATGAAGAACTTCTTCCTCGTAGGTTGGTTGCACCGCAGGTGAATCAGTTGGTTCAAGTTGCTCAGAAATGCCAAAGCACAATTGCTGAAAGTGGATCTGATGGGATATCGCAGCAGGATCTACAGACAAACAGCAATATGGTACTGACAGCTGGGCGGCAGCTTGCAAAGAGTTTGGAGTTGCAGTCATTGAATGATTTGGGCTTTTCTAAAAGATATGTGAGGTGTTTGCAGATCTCAGAGGTTGTCAATAGCATGAAAGACTTGATTGACTTCTGCAGGGAGAACAAAGTTGGGCCTATCGAGGGCTTGAAGGTCTATCCTCGGCATGCCACTGCAGCCAAGCTCCAGATGCAAAAGATGCAGGAAATGGAGCAGTTAGCAAGTGCTCAGGGTATGCCCACTGACAGGAACACTCTCAATAAGCTAATGGCATTGCATCCTGGGATGAATAACCAAATCAATAATAACCATCACATGGTCAATCGTGGAGCTATGAGTGGTTCAGCCCAAGCTGCTTTGCAACTGACTACTTACCAGAATCTGCTCTTGAGGCAGAACTCAATGAACTCAAATGCAAACTCTCTTCAACAGGAGGCATCTTCTTCCTTCAATAATTCCAACCATAGCCCATCGTCAACATTCCAAGGTGCTTCTGCTTTAATACCCGGATCCATGCAGAACTTACCCGGTAGTGGTTTGTCAAGTCCCCATTTACCCTCGCGACAGCCGCACCAGATGCAGCAGCGCTCACTTAGTTCCAATAGCTTGCTACCACAAAACCATTCACCTAGCTCCCAAGGAAACCAGGCCTTGCAGCAACAGGTGATCCAGCAACTGCTACAGGAGATGTCCAATAACAGTGGGGGAGGTGGACAACAATCTCTTTCTGGTCCAAATGCAAATGGGAGTGTGGGAAGGAGTGGGTTGAGTTTTGGAGGCAACAATCCAGCGGCAACTCCAGCCACATCCAATGTCTCCGGAGGTCATGGCCCTGCGCCAAGCAGGAGTAATAGCTTCAAGGCTGCTGCAAACAGTGACTCTTCGGCAGGTGGTGGTAACAATGCATACAACCAGAGAGCATCTGATTTACCCTCAAACCTTCACTTGCAGGAGGATATGGTACCGGACATCGCCCATGAATTCACAGACAACGGTTTTTTTAACAGTGATCTTGACGATAATATGGGGTATGGCTGGAAGGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001666 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009909 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010044 GO:0010154 GO:0010243 GO:0010272 GO:0014070 GO:0022414 GO:0032501 GO:0032502 GO:0033554 GO:0035670 GO:0036293 GO:0042221 GO:0042493 GO:0043207 GO:0046677 GO:0046898 GO:0046982 GO:0046983 GO:0047484 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048519 GO:0048580 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060090 GO:0060992 GO:0061458 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0080134 GO:0090567 GO:0097159 GO:0097305 GO:0099402 GO:1901000 GO:1901001 GO:1901363 GO:1901654 GO:1901698 GO:1901700 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LIM_bind

Protein Analysis

869

Amino Acids

94.98

Weight (kDa)

9.09

Isoelectric Point (pI)

63.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004096)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62090 AT5G62090 AT5G62090
fragaria_vesca	FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060
malus_domestica	MD01G1197300.v1.1 MD07G1264600.v1.1
prunus_persica	Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1
pyrus_communis	pycom01g20770 pycom07g24320
rosa_chinensis	RchiOBHm_Chr1g0376781
rosa_laevigata	RLG00000026560 RLG00000026570 RLG00000026571
rosa_multiflora	Rmu_sc0002113.1_g000009
rosa_roxburghii	Rroxscaffold_4G00281740
rosa_rugosa	Rorug01G0398100 Rorug01G0398200.1 Rorug01G0398300 Rorug01G0398300
rosa_samantha	Rh1AG415500 Rh1BG375000 Rh1CG388800 Rh1DG405600
rosa_wichuraiana	Rw1G036450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	634, 1426, 2438
Acc36I	ACCTGC	3 cut(s)	634, 1426, 2438
Acc65I	GGTACC	1 cut(s)	2521
AccB1I	GGYRCC	3 cut(s)	4, 1395, 2521
AccB7I	CCANNNNNTGG	2 cut(s)	227, 1876
AccBSI	CCGCTC	1 cut(s)	201
AccI	GTMKAC	2 cut(s)	931, 1305
AccII	CGCG	2 cut(s)	547, 2122
AccIII	TCCGGA	1 cut(s)	2378
AclWI	GGATC	9 cut(s)	566, 579, 668, 681, 1501, 1524, 2064, 2077, 2221
AcoI	YGGCCR	1 cut(s)	520
AcsI	RAATTY	5 cut(s)	54, 412, 1193, 1382, 2540
AcuI	CTGAAG	1 cut(s)	704
AcvI	CACGTG	1 cut(s)	1241
AcyI	GRCGYC	1 cut(s)	1396
AdeI	CACNNNGTG	2 cut(s)	1025, 1082
AfaI	GTAC	4 cut(s)	264, 552, 1542, 2523
AfeI	AGCGCT	1 cut(s)	2147
AjiI	CACGTC	1 cut(s)	592
AjnI	CCWGG	5 cut(s)	139, 522, 553, 1840, 2205
Alw21I	GWGCWC	5 cut(s)	110, 928, 1173, 1393, 1789
Alw26I	GTCTC	3 cut(s)	84, 850, 2380
Alw44I	GTGCAC	1 cut(s)	1389
AlwI	GGATC	9 cut(s)	566, 579, 668, 681, 1501, 1524, 2064, 2077, 2221
AlwNI	CAGNNNCTG	3 cut(s)	661, 1942, 2236
Ama87I	CYCGRG	1 cut(s)	12
Aor13HI	TCCGGA	1 cut(s)	2378
Aor51HI	AGCGCT	1 cut(s)	2147
AoxI	GGCC	7 cut(s)	520, 585, 691, 965, 1694, 2208, 2389
ApaLI	GTGCAC	1 cut(s)	1389
ApoI	RAATTY	5 cut(s)	54, 412, 1193, 1382, 2540
Asp700I	GAANNNNTTC	2 cut(s)	1407, 1410
Asp718I	GGTACC	1 cut(s)	2521
AspLEI	GCGC	6 cut(s)	34, 547, 903, 1398, 2148, 2398
AspS9I	GGNCC	7 cut(s)	164, 218, 275, 586, 1694, 2291, 2390
AsuC2I	CCSGG	3 cut(s)	607, 2067, 2088
AsuHPI	GGTGA	4 cut(s)	1011, 1450, 2178, 2236
AvaI	CYCGRG	1 cut(s)	12
AvaII	GGWCC	4 cut(s)	164, 218, 275, 2291
AxyI	CCTNAGG	1 cut(s)	1092
BaeGI	GKGCMC	1 cut(s)	1393
BalI	TGGCCA	1 cut(s)	522
BamHI	GGATCC	3 cut(s)	571, 673, 2069
BanI	GGYRCC	3 cut(s)	4, 1395, 2521
BanII	GRGCYC	2 cut(s)	110, 784
BarI	GAAGNNNNNNTAC	2 cut(s)	1240, 1272
BauI	CACGAG	1 cut(s)	1023
BbrPI	CACGTG	1 cut(s)	1241
BbsI	GAAGAC	1 cut(s)	387
Bbv12I	GWGCWC	5 cut(s)	110, 928, 1173, 1393, 1789
BccI	CCATC	7 cut(s)	65, 383, 905, 1032, 1493, 1878, 2038
BceAI	ACGGC	3 cut(s)	488, 980, 1409
BciT130I	CCWGG	5 cut(s)	141, 524, 555, 1842, 2207
BclI	TGATCA	1 cut(s)	424
BcnI	CCSGG	3 cut(s)	607, 2067, 2088
BcoDI	GTCTC	3 cut(s)	84, 850, 2380
BfaI	CTAG	3 cut(s)	489, 1176, 2190
BfmI	CTRYAG	5 cut(s)	773, 1520, 1675, 1734, 2240
BfoI	RGCGCY	3 cut(s)	904, 1399, 2149
BfuAI	ACCTGC	3 cut(s)	634, 1426, 2438
BglII	AGATCT	1 cut(s)	1632
Bme1390I	CCNGG	8 cut(s)	141, 524, 555, 607, 1842, 2067, 2088, 2207
Bme18I	GGWCC	4 cut(s)	164, 218, 275, 2291
BmeT110I	CYCGRG	1 cut(s)	12
BmgBI	CACGTC	1 cut(s)	592
BmgT120I	GGNCC	7 cut(s)	164, 218, 275, 586, 1694, 2291, 2390
BmiI	GGNNCC	8 cut(s)	6, 165, 277, 573, 675, 1397, 2071, 2523
BmrFI	CCNGG	8 cut(s)	141, 524, 555, 607, 1842, 2067, 2088, 2207
BmrI	ACTGGG	2 cut(s)	156, 778
BmuI	ACTGGG	2 cut(s)	156, 778
BpiI	GAAGAC	1 cut(s)	387
BplI	GAGNNNNNCTC	2 cut(s)	1001, 1033
BpmI	CTGGAG	4 cut(s)	42, 576, 1730, 2343
Bpu10I	CCTNAGC	1 cut(s)	1788
BpuEI	CTTGAG	2 cut(s)	124, 1969
BpuMI	CCSGG	3 cut(s)	607, 2067, 2088
Bsa29I	ATCGAT	2 cut(s)	380, 1212
BsaAI	YACGTR	1 cut(s)	1241
BsaHI	GRCGYC	1 cut(s)	1396
BsaJI	CCNNGG	9 cut(s)	64, 470, 537, 605, 688, 1721, 1841, 2044, 2197
BsaWI	WCCGGW	3 cut(s)	166, 2378, 2524
BsaXI	ACNNNNNCTCC	2 cut(s)	1568, 1598
Bse1I	ACTGG	4 cut(s)	151, 523, 784, 884
Bse21I	CCTNAGG	1 cut(s)	1092
Bse3DI	GCAATG	2 cut(s)	1121, 1832
BseAI	TCCGGA	1 cut(s)	2378
BseBI	CCWGG	5 cut(s)	141, 524, 555, 1842, 2207
BseCI	ATCGAT	2 cut(s)	380, 1212
BseDI	CCNNGG	9 cut(s)	64, 470, 537, 605, 688, 1721, 1841, 2044, 2197
BseGI	GGATG	7 cut(s)	76, 350, 394, 1111, 1837, 1851, 2366
BseMI	GCAATG	2 cut(s)	1121, 1832
BseMII	CTCAG	7 cut(s)	95, 228, 431, 1106, 1475, 1650, 1802
BseNI	ACTGG	4 cut(s)	151, 523, 784, 884
BseSI	GKGCMC	1 cut(s)	1393
BseYI	CCCAGC	1 cut(s)	1550
Bsh1236I	CGCG	2 cut(s)	547, 2122
BshFI	GGCC	7 cut(s)	522, 587, 693, 967, 1696, 2210, 2391
BshNI	GGYRCC	3 cut(s)	4, 1395, 2521
BshVI	ATCGAT	2 cut(s)	380, 1212
BsiHKAI	GWGCWC	5 cut(s)	110, 928, 1173, 1393, 1789
BsiHKCI	CYCGRG	1 cut(s)	12
BsiSI	CCGG	6 cut(s)	167, 607, 2067, 2088, 2379, 2525
BslFI	GGGAC	3 cut(s)	191, 261, 2091
BsmAI	GTCTC	3 cut(s)	84, 850, 2380
BsmFI	GGGAC	3 cut(s)	191, 261, 2091
BsnI	GGCC	7 cut(s)	522, 587, 693, 967, 1696, 2210, 2391
BsoBI	CYCGRG	1 cut(s)	12
Bsp1286I	GDGCHC	6 cut(s)	110, 784, 928, 1173, 1393, 1789
Bsp13I	TCCGGA	1 cut(s)	2378
Bsp19I	CCATGG	1 cut(s)	537
Bsp68I	TCGCGA	1 cut(s)	2122
BspANI	GGCC	7 cut(s)	522, 587, 693, 967, 1696, 2210, 2391
BspCNI	CTCAG	7 cut(s)	94, 227, 430, 1105, 1474, 1649, 1801
BspDI	ATCGAT	2 cut(s)	380, 1212
BspEI	TCCGGA	1 cut(s)	2378
BspFNI	CGCG	2 cut(s)	547, 2122
BspLI	GGNNCC	8 cut(s)	6, 165, 277, 573, 675, 1397, 2071, 2523
BspMAI	CTGCAG	3 cut(s)	777, 1679, 1738
BspMI	ACCTGC	3 cut(s)	634, 1426, 2438
BspPI	GGATC	9 cut(s)	566, 579, 668, 681, 1501, 1524, 2064, 2077, 2221
BspT107I	GGYRCC	3 cut(s)	4, 1395, 2521
BsrBI	CCGCTC	1 cut(s)	201
BsrDI	GCAATG	2 cut(s)	1121, 1832
BsrI	ACTGG	4 cut(s)	151, 523, 784, 884
BssECI	CCNNGG	9 cut(s)	64, 470, 537, 605, 688, 1721, 1841, 2044, 2197
BssNAI	GTATAC	1 cut(s)	1306
BssNI	GRCGYC	1 cut(s)	1396
BssSI	CACGAG	1 cut(s)	1023
BssT1I	CCWWGG	5 cut(s)	64, 537, 688, 2044, 2197
Bst1107I	GTATAC	1 cut(s)	1306
Bst2BI	CACGAG	1 cut(s)	1023
Bst2UI	CCWGG	5 cut(s)	141, 524, 555, 1842, 2207
Bst4CI	ACNGT	4 cut(s)	2261, 2435, 2555, 2567
Bst6I	CTCTTC	3 cut(s)	130, 1989, 2446
BstACI	GRCGYC	1 cut(s)	1396
BstAPI	GCANNNNNTGC	5 cut(s)	661, 733, 763, 1759, 2137
BstBAI	YACGTR	1 cut(s)	1241
BstC8I	GCNNGC	4 cut(s)	298, 1563, 1728, 2168
BstDEI	CTNAG	9 cut(s)	81, 214, 417, 1029, 1092, 1461, 1636, 1788, 2153
BstDSI	CCRYGG	2 cut(s)	470, 537
BstENI	CCTNNNNNAGG	1 cut(s)	991
BstF5I	GGATG	7 cut(s)	76, 350, 394, 1111, 1837, 1851, 2366
BstFNI	CGCG	2 cut(s)	547, 2122
BstH2I	RGCGCY	3 cut(s)	904, 1399, 2149
BstHHI	GCGC	6 cut(s)	34, 547, 903, 1398, 2148, 2398
BstMAI	GTCTC	3 cut(s)	84, 850, 2380
BstNI	CCWGG	5 cut(s)	141, 524, 555, 1842, 2207
BstNSI	RCATGY	2 cut(s)	370, 1730
BstSCI	CCNGG	8 cut(s)	139, 522, 553, 605, 1840, 2065, 2086, 2205
BstSFI	CTRYAG	5 cut(s)	773, 1520, 1675, 1734, 2240
BstSLI	GKGCMC	1 cut(s)	1393
BstUI	CGCG	2 cut(s)	547, 2122
BstV2I	GAAGAC	1 cut(s)	387
BstX2I	RGATCY	6 cut(s)	571, 673, 1493, 1516, 1632, 2069
BstXI	CCANNNNNNTGG	1 cut(s)	71
BstYI	RGATCY	6 cut(s)	571, 673, 1493, 1516, 1632, 2069
BstZ17I	GTATAC	1 cut(s)	1306
Bsu15I	ATCGAT	2 cut(s)	380, 1212
Bsu36I	CCTNAGG	1 cut(s)	1092
BsuRI	GGCC	7 cut(s)	522, 587, 693, 967, 1696, 2210, 2391
BsuTUI	ATCGAT	2 cut(s)	380, 1212
BtgI	CCRYGG	2 cut(s)	470, 537
BtgZI	GCGATG	2 cut(s)	318, 2515
BtrI	CACGTC	1 cut(s)	592
BtsCI	GGATG	7 cut(s)	76, 350, 394, 1111, 1837, 1851, 2366
BtsI	GCAGTG	1 cut(s)	1731
BtsIMutI	CAGTG	5 cut(s)	1731, 1800, 2266, 2440, 2572
BtuMI	TCGCGA	1 cut(s)	2122
BveI	ACCTGC	3 cut(s)	634, 1426, 2438
Cac8I	GCNNGC	4 cut(s)	298, 1563, 1728, 2168
CaiI	CAGNNNCTG	3 cut(s)	661, 1942, 2236
CfoI	GCGC	6 cut(s)	34, 547, 903, 1398, 2148, 2398
Cfr13I	GGNCC	7 cut(s)	164, 218, 275, 586, 1694, 2291, 2390
ClaI	ATCGAT	2 cut(s)	380, 1212
Csp6I	GTAC	4 cut(s)	263, 551, 1541, 2522
CspCI	CAANNNNNGTGG	2 cut(s)	2242, 2277
CviQI	GTAC	4 cut(s)	263, 551, 1541, 2522
DdeI	CTNAG	9 cut(s)	81, 214, 417, 1029, 1092, 1461, 1636, 1788, 2153
DinI	GGCGCC	1 cut(s)	1397
DraIII	CACNNNGTG	2 cut(s)	1025, 1082
EaeI	YGGCCR	1 cut(s)	520
Eam1104I	CTCTTC	3 cut(s)	130, 1989, 2446
EarI	CTCTTC	3 cut(s)	130, 1989, 2446
Ecl136II	GAGCTC	1 cut(s)	108
Eco130I	CCWWGG	5 cut(s)	64, 537, 688, 2044, 2197
Eco147I	AGGCCT	1 cut(s)	2210
Eco24I	GRGCYC	2 cut(s)	110, 784
Eco32I	GATATC	2 cut(s)	616, 1506
Eco47I	GGWCC	4 cut(s)	164, 218, 275, 2291
Eco47III	AGCGCT	1 cut(s)	2147
Eco53kI	GAGCTC	1 cut(s)	108
Eco57I	CTGAAG	1 cut(s)	704
Eco72I	CACGTG	1 cut(s)	1241
Eco81I	CCTNAGG	1 cut(s)	1092
Eco88I	CYCGRG	1 cut(s)	12
EcoICRI	GAGCTC	1 cut(s)	108
EcoNI	CCTNNNNNAGG	1 cut(s)	991
EcoRI	GAATTC	2 cut(s)	1382, 2540
EcoRII	CCWGG	5 cut(s)	139, 522, 553, 1840, 2205
EcoRV	GATATC	2 cut(s)	616, 1506
EcoT14I	CCWWGG	5 cut(s)	64, 537, 688, 2044, 2197
EcoT22I	ATGCAT	1 cut(s)	2467
EcoT38I	GRGCYC	2 cut(s)	110, 784
EgeI	GGCGCC	1 cut(s)	1397
EheI	GGCGCC	1 cut(s)	1397
ErhI	CCWWGG	5 cut(s)	64, 537, 688, 2044, 2197
FalI	AAGNNNNNCTT	4 cut(s)	702, 734, 1395, 1427
FaqI	GGGAC	3 cut(s)	191, 261, 2091
FbaI	TGATCA	1 cut(s)	424
FblI	GTMKAC	2 cut(s)	931, 1305
FokI	GGATG	7 cut(s)	83, 337, 401, 1118, 1824, 1858, 2353
FriOI	GRGCYC	2 cut(s)	110, 784
FspBI	CTAG	3 cut(s)	489, 1176, 2190
GlaI	GCGC	6 cut(s)	33, 546, 902, 1397, 2147, 2397
GsaI	CCCAGC	1 cut(s)	1554
GsuI	CTGGAG	4 cut(s)	42, 576, 1730, 2343
HaeII	RGCGCY	3 cut(s)	904, 1399, 2149
HaeIII	GGCC	7 cut(s)	522, 587, 693, 967, 1696, 2210, 2391
HapII	CCGG	6 cut(s)	167, 607, 2067, 2088, 2379, 2525
HhaI	GCGC	6 cut(s)	34, 547, 903, 1398, 2148, 2398
Hin1I	GRCGYC	1 cut(s)	1396
Hin6I	GCGC	6 cut(s)	32, 545, 901, 1396, 2146, 2396
HinP1I	GCGC	6 cut(s)	32, 545, 901, 1396, 2146, 2396
HincII	GTYRAC	2 cut(s)	94, 2037
HindII	GTYRAC	2 cut(s)	94, 2037
HinfI	GANTC	6 cut(s)	311, 451, 1206, 1441, 1939, 2438
HpaI	GTTAAC	1 cut(s)	94
HpaII	CCGG	6 cut(s)	167, 607, 2067, 2088, 2379, 2525
HphI	GGTGA	4 cut(s)	1011, 1450, 2178, 2236
Hpy166II	GTNNAC	6 cut(s)	94, 932, 1306, 1391, 2037, 2273
Hpy188I	TCNGA	6 cut(s)	750, 973, 1464, 1498, 1639, 2485
Hpy8I	GTNNAC	6 cut(s)	94, 932, 1306, 1391, 2037, 2273
HpyCH4III	ACNGT	4 cut(s)	2261, 2435, 2555, 2567
HpyCH4IV	ACGT	2 cut(s)	591, 1240
HpyF3I	CTNAG	9 cut(s)	81, 214, 417, 1029, 1092, 1461, 1636, 1788, 2153
HpySE526I	ACGT	2 cut(s)	591, 1240
Hsp92I	GRCGYC	1 cut(s)	1396
HspAI	GCGC	6 cut(s)	32, 545, 901, 1396, 2146, 2396
KasI	GGCGCC	1 cut(s)	1395
Kpn2I	TCCGGA	1 cut(s)	2378
KpnI	GGTACC	1 cut(s)	2525
Ksp22I	TGATCA	1 cut(s)	424
KspAI	GTTAAC	1 cut(s)	94
LmnI	GCTCC	6 cut(s)	557, 1176, 1749, 1771, 1889, 2198
MaeI	CTAG	3 cut(s)	489, 1176, 2190
MaeII	ACGT	2 cut(s)	591, 1240
MaeIII	GTNAC	5 cut(s)	244, 648, 1003, 2435, 2456
MbiI	CCGCTC	1 cut(s)	201
MfeI	CAATTG	1 cut(s)	1479
MflI	RGATCY	6 cut(s)	571, 673, 1493, 1516, 1632, 2069
MhlI	GDGCHC	6 cut(s)	110, 784, 928, 1173, 1393, 1789
MlsI	TGGCCA	1 cut(s)	522
MluNI	TGGCCA	1 cut(s)	522
Mly113I	GGCGCC	1 cut(s)	1396
MlyI	GAGTC	3 cut(s)	320, 1215, 2432
MmeI	TCCRAC	4 cut(s)	378, 591, 1254, 2043
Mox20I	TGGCCA	1 cut(s)	522
Mph1103I	ATGCAT	1 cut(s)	2467
MroI	TCCGGA	1 cut(s)	2378
MroXI	GAANNNNTTC	2 cut(s)	1407, 1410
MscI	TGGCCA	1 cut(s)	522
MseI	TTAA	5 cut(s)	93, 897, 1182, 2060, 2562
MslI	CAYNNNNRTG	2 cut(s)	365, 1243
Msp20I	TGGCCA	1 cut(s)	522
MspA1I	CMGCKG	3 cut(s)	958, 1550, 2351
MspI	CCGG	6 cut(s)	167, 607, 2067, 2088, 2379, 2525
MspR9I	CCNGG	8 cut(s)	141, 524, 555, 607, 1842, 2067, 2088, 2207
MunI	CAATTG	1 cut(s)	1479
MvaI	CCWGG	5 cut(s)	141, 524, 555, 1842, 2207
MvnI	CGCG	2 cut(s)	547, 2122
NarI	GGCGCC	1 cut(s)	1396
NciI	CCSGG	3 cut(s)	607, 2067, 2088
NcoI	CCATGG	1 cut(s)	537
NlaIV	GGNNCC	8 cut(s)	6, 165, 277, 573, 675, 1397, 2071, 2523
NmeAIII	GCCGAG	1 cut(s)	1702
NmuCI	GTSAC	3 cut(s)	244, 1003, 2435
NruI	TCGCGA	1 cut(s)	2122
NsiI	ATGCAT	1 cut(s)	2467
NspI	RCATGY	2 cut(s)	370, 1730
PaeI	GCATGC	1 cut(s)	1730
PaqCI	CACCTGC	3 cut(s)	634, 1426, 2438
PceI	AGGCCT	1 cut(s)	2210
PcsI	WCGNNNNNNNCGW	1 cut(s)	341
PdmI	GAANNNNTTC	2 cut(s)	1407, 1410
PfeI	GAWTC	3 cut(s)	451, 1441, 1939
PflMI	CCANNNNNTGG	2 cut(s)	227, 1876
PfoI	TCCNGGA	1 cut(s)	139
PleI	GAGTC	3 cut(s)	319, 1214, 2432
PluTI	GGCGCC	1 cut(s)	1399
PmaCI	CACGTG	1 cut(s)	1241
PmlI	CACGTG	1 cut(s)	1241
PpsI	GAGTC	3 cut(s)	319, 1214, 2432
Ppu21I	YACGTR	1 cut(s)	1241
Psp124BI	GAGCTC	1 cut(s)	110
Psp6I	CCWGG	5 cut(s)	139, 522, 553, 1840, 2205
PspCI	CACGTG	1 cut(s)	1241
PspFI	CCCAGC	1 cut(s)	1550
PspGI	CCWGG	5 cut(s)	139, 522, 553, 1840, 2205
PspN4I	GGNNCC	8 cut(s)	6, 165, 277, 573, 675, 1397, 2071, 2523
PspPI	GGNCC	7 cut(s)	164, 218, 275, 586, 1694, 2291, 2390
PstI	CTGCAG	3 cut(s)	777, 1679, 1738
PstNI	CAGNNNCTG	3 cut(s)	661, 1942, 2236
PsuI	RGATCY	6 cut(s)	571, 673, 1493, 1516, 1632, 2069
PvuII	CAGCTG	1 cut(s)	1550
RruI	TCGCGA	1 cut(s)	2122
RsaI	GTAC	4 cut(s)	264, 552, 1542, 2523
RsaNI	GTAC	4 cut(s)	263, 551, 1541, 2522
RseI	CAYNNNNRTG	2 cut(s)	365, 1243
SacI	GAGCTC	1 cut(s)	110
SaqAI	TTAA	5 cut(s)	93, 897, 1182, 2060, 2562
Sau96I	GGNCC	7 cut(s)	164, 218, 275, 586, 1694, 2291, 2390
SchI	GAGTC	3 cut(s)	320, 1215, 2432
ScrFI	CCNGG	8 cut(s)	141, 524, 555, 607, 1842, 2067, 2088, 2207
SduI	GDGCHC	6 cut(s)	110, 784, 928, 1173, 1393, 1789
SfcI	CTRYAG	5 cut(s)	773, 1520, 1675, 1734, 2240
SfoI	GGCGCC	1 cut(s)	1397
SinI	GGWCC	4 cut(s)	164, 218, 275, 2291
SmiMI	CAYNNNNRTG	2 cut(s)	365, 1243
SmlI	CTYRAG	2 cut(s)	103, 1948
SmoI	CTYRAG	2 cut(s)	103, 1948
SphI	GCATGC	1 cut(s)	1730
SseBI	AGGCCT	1 cut(s)	2210
SspDI	GGCGCC	1 cut(s)	1395
SspMI	CTAG	3 cut(s)	489, 1176, 2190
SstI	GAGCTC	1 cut(s)	110
StuI	AGGCCT	1 cut(s)	2210
StyD4I	CCNGG	8 cut(s)	139, 522, 553, 605, 1840, 2065, 2086, 2205
StyI	CCWWGG	5 cut(s)	64, 537, 688, 2044, 2197
TaaI	ACNGT	4 cut(s)	2261, 2435, 2555, 2567
TaiI	ACGT	2 cut(s)	594, 1243
TaqI	TCGA	3 cut(s)	380, 1212, 1701
TatI	WGTACW	1 cut(s)	262
TauI	GCSGC	6 cut(s)	739, 918, 961, 1558, 2131, 2354
TfiI	GAWTC	3 cut(s)	451, 1441, 1939
Tru1I	TTAA	5 cut(s)	93, 897, 1182, 2060, 2562
Tru9I	TTAA	5 cut(s)	93, 897, 1182, 2060, 2562
TscAI	CASTG	5 cut(s)	1738, 1807, 2266, 2440, 2572
TseFI	GTSAC	3 cut(s)	244, 1003, 2435
Tsp45I	GTSAC	3 cut(s)	244, 1003, 2435
TspDTI	ATGAA	9 cut(s)	30, 197, 489, 1230, 1416, 1670, 1862, 1979, 2553
TspGWI	ACGGA	2 cut(s)	388, 883
TspRI	CASTG	5 cut(s)	1738, 1807, 2266, 2440, 2572
Van91I	CCANNNNNTGG	2 cut(s)	227, 1876
VneI	GTGCAC	1 cut(s)	1389
VpaK11BI	GGWCC	4 cut(s)	164, 218, 275, 2291
XagI	CCTNNNNNAGG	1 cut(s)	991
XapI	RAATTY	5 cut(s)	54, 412, 1193, 1382, 2540
XceI	RCATGY	2 cut(s)	370, 1730
XmiI	GTMKAC	2 cut(s)	931, 1305
XmnI	GAANNNNTTC	2 cut(s)	1407, 1410
XspI	CTAG	3 cut(s)	489, 1176, 2190
Zsp2I	ATGCAT	1 cut(s)	2467

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.