Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0004096

Physical Location & Seq

Genomic Coordinates Forward (+)

64375326 .. 64380291

Gene Structure 4966 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G036450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2490 bp

ATGGTGCCTTCACGGGTGGCTGGAGGATTAACGCAATCTTCATCGAGTTCTGGAATTTTCTTCCAAGGGGATGGGCAGTCTCAGTCTGTAGTTAACTCTCACTTGAGCTCATCTTTCGGGAACTCTTCTAATTCAATTCCTGGAACTGGGCGTTCAAATTTGGGTCCGGTTTCTGGGGACATGAACAATGCAGTTTTAAGCAGTGTGGCAAATTCAGGTCCAAGTGTTGGGGCAAGTTCTTTGGTCACAGATGCAAACTCTGTACTTTCAGGTGGTCCCCATTTGCAGAGAATGCAACAGAATTCTCAGCATGACCAGAATTCCCAACAAATTCAGCAGGGTCAGCAGCACCAGCACCTGCGGCAGCAGGGGACTTCTAGTGCTACATCCTTGCCCACGTCCCAAACTGGCCAAGTTTCCCTTCCCATGGGAGCACGTGTTCCTGGAACTTTTATTCAAGATCCAAATAATTTAGCCCACGTCCAGAAGAAACCACGGTTGGATATCAAGCAGGAAGAAATTATGCAGCAGCAGGTGTTGCAGCAACTACTGCAAAGACAAGATTCCATGCAGTTCCAAGGACGGAATCCACAGTTACATGCCTTGATTCAACAGCAGAGACTACGGCAACAGCACCAGCAACAGCAACAAATTTTTCAGTCCATGCCTCAATTGCAGAGAGCACATATTCAGCAACAGCAGCAGCAGCAGCAACAGCAGTTGCAGTTGAGACAGCAACTTCAACAACAAGCTTTGCAGCCAGCATCTTCCATTAATAAGCGTCCATATGATGGTGGTGTTTGTGCTCGTAGGCTGATGCAATATCTGTATCATCAGCGGCAACGACCAGCTGACAATAGTATTGCGTATTGGAGGAAGTTTGTGACAGAGTATTACTCCCCTCGTGCTAAGAAAAGATGGTGCTTGTCGTTATATGACAATGTTGGGCATCATGCGCTTGGTGTTTTCCCCCAGGCTTCTATGGATGCATGGCAGTGTGACATTTGTGGTTCTAAATCTGGAAGAGGTTTCGAGGCGACCTTTGAAGTACTCCCTAGACTTAATGAGATCAAATTTGGCAGTGGAGTCATCGATGAGCTTTTGTTTCTAGACTTGCCAAGAGAATGTAGATTTCCTTCTGGTGTAATGATGCTGGAATATGGAAAAGCAGTTCAAGAGAGTGTATACGAGCAACTTCGTGTTGTTCGCGAGGGTCAGCTTCGTATCGTGTTTACACAAGATTTAAAGATATTGTCTTGGGAATTTTGTGCACGACGCCATGAAGAGCTTCTTCCTCGTAGGCTTGTTGCTCCACAGGTCAATCAGTTGGTTCAGGTTGCACAGAAGTGCCAGAGTACGATTGCTGAAAGTGGATCTGATGGGGTTTCTCAGCAGGATCTACAAGCAAATAGCAATTTGGTTCTGACAGCTGGGCGGCAGCTTGCAAAGAGTTTGGAGTTGCAGTCACTGAATGACTTGGGCTTTTCTAAAAGATATGTGAGGTGTTTGCAGATATCAGAGGTTGTGAACAGCATGAAAGATTTGATCGATTTCTGCCGGGAAAACAAAGTTGGCCCAATTGAGGGCTTGAAGGTTTATCCTCGACATGCGAATGCAACCAAGCTCCAGATGCAAAAGATGCAGGAAATGGAGCAGTTAGCAAATGTTCAGGGCATGCCAACTGACAGGAACACTCTGAATAAACTAATGGCGTTGCATCCCGTACTAAACAATCAAATGAATAACAACCAGCACATGGCCAGTCGAGGAGCTTTGAGTGGCTCAGCACAAGCAGCTTTAGCGCTGACCAATTACCAGAATCTGCTCATGAGGCAGAACTCAATGAATTCAAATGCAAATTCTCTTCAACAGGAGGCATCTTCGTCTTTCAATAACTCCAACCAAAGTCCATCGTCACCTTTTCAAGGTGCTGCTTCTTTAATACCGGGACCAATGCAGAATTTACCCGGCAGTGGCTATTCAAGTCCCGATCTATCCTCACGACAGCCACATCAGACACCGCAGCTGCAGCAGCGGTCACTCAGTTCTAACAGCTTGCTTCAACAAACCAATCCGCAGAACTCCCAAGGCCAGGTCTTGCAGCAACAGATGATCCAGCAACTGCTGCAGGATATGTCTAATAATAACAGTGGGGGGCAACAATCTCTTCCCGGACCAAATTCTAATGGGAGTTTGACAAGGAATGGGTTGAGTTTTGGAGGTAATAATTCAGCGGCTGCTAATGCTACTCCAACTGTGTCTGGAAGTCACGGCCCTGCTCCAAGCAGGAGTAACAGTTTCAAAGCTGCTGCAAACAGCGACTCTTCAGCAGGTGGTGGTAACAATGCATTCAATCAGAGAGCACAAGAATTACCCTCAAACCTTCATTTGCAAGAGGATATGGTTCAAGACATTGCCCGTGAATTCACAGAAAATGGCTTTTTTAACAATGATCTTGATGATAATATGGGTTACGGCTGGAAGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001666 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009909 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010044 GO:0010154 GO:0010243 GO:0010272 GO:0014070 GO:0022414 GO:0032501 GO:0032502 GO:0033554 GO:0035670 GO:0036293 GO:0042221 GO:0042493 GO:0043207 GO:0046677 GO:0046898 GO:0046982 GO:0046983 GO:0047484 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048519 GO:0048580 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060090 GO:0060992 GO:0061458 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0080134 GO:0090567 GO:0097159 GO:0097305 GO:0099402 GO:1901000 GO:1901001 GO:1901363 GO:1901654 GO:1901698 GO:1901700 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LIM_bind

Protein Analysis

829

Amino Acids

91.42

Weight (kDa)

9.17

Isoelectric Point (pI)

61.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LIM_bind	PF01803	271 - 531	1.7e-65	LIM-domain binding protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004096)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62090 AT5G62090 AT5G62090
fragaria_vesca	FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060
malus_domestica	MD01G1197300.v1.1 MD07G1264600.v1.1
prunus_persica	Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1
pyrus_communis	pycom01g20770 pycom07g24320
rosa_chinensis	RchiOBHm_Chr1g0376781
rosa_laevigata	RLG00000026560 RLG00000026570 RLG00000026571
rosa_multiflora	Rmu_sc0002113.1_g000009
rosa_roxburghii	Rroxscaffold_4G00281740
rosa_rugosa	Rorug01G0398100 Rorug01G0398200.1 Rorug01G0398300 Rorug01G0398300
rosa_samantha	Rh1AG415500 Rh1BG375000 Rh1CG388800 Rh1DG405600
rosa_wichuraiana	Rw1G036450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	366, 523, 2321
Acc36I	ACCTGC	3 cut(s)	366, 523, 2321
AccB1I	GGYRCC	1 cut(s)	4
AccB7I	CCANNNNNTGG	3 cut(s)	227, 791, 1756
AccI	GTMKAC	1 cut(s)	1185
AccII	CGCG	1 cut(s)	1209
AciI	CCGC	7 cut(s)	361, 838, 1435, 2021, 2035, 2075, 2234
AclWI	GGATC	4 cut(s)	455, 1381, 1404, 2107
AcoI	YGGCCR	2 cut(s)	409, 1758
AcuI	CTGAAG	1 cut(s)	2310
AcvI	CACGTG	1 cut(s)	437
AcyI	GRCGYC	1 cut(s)	1276
AfaI	GTAC	4 cut(s)	264, 1050, 1357, 1725
AfeI	AGCGCT	1 cut(s)	1803
AflIII	ACRYGT	1 cut(s)	436
AjiI	CACGTC	2 cut(s)	399, 481
AjnI	CCWGG	4 cut(s)	139, 442, 972, 2091
AjuI	GAANNNNNNNTTGG	6 cut(s)	405, 437, 482, 514, 1554, 1586
AleI	CACNNNNGTG	1 cut(s)	1345
AloI	GAACNNNNNNTCC	4 cut(s)	423, 455, 1155, 1187
Alw21I	GWGCWC	6 cut(s)	110, 436, 685, 808, 1273, 2365
Alw26I	GTCTC	3 cut(s)	84, 613, 724
Alw44I	GTGCAC	1 cut(s)	1269
AlwI	GGATC	4 cut(s)	455, 1381, 1404, 2107
AlwNI	CAGNNNCTG	5 cut(s)	358, 1468, 1822, 2122, 2237
Aor51HI	AGCGCT	1 cut(s)	1803
AoxI	GGCC	5 cut(s)	409, 1573, 1758, 2089, 2272
ApaLI	GTGCAC	1 cut(s)	1269
AseI	ATTAAT	1 cut(s)	774
Asp700I	GAANNNNTTC	1 cut(s)	1287
AspLEI	GCGC	2 cut(s)	958, 1804
AspS9I	GGNCC	7 cut(s)	164, 218, 275, 1574, 1949, 2174, 2273
AsuC2I	CCSGG	4 cut(s)	1559, 1947, 1968, 2172
AsuHPI	GGTGA	1 cut(s)	1908
AvaII	GGWCC	5 cut(s)	164, 218, 275, 1949, 2174
BaeGI	GKGCMC	1 cut(s)	1273
BalI	TGGCCA	2 cut(s)	411, 1760
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	1 cut(s)	110
BarI	GAAGNNNNNNTAC	2 cut(s)	1120, 1152
BauI	CACGAG	1 cut(s)	903
BbrPI	CACGTG	1 cut(s)	437
Bbv12I	GWGCWC	6 cut(s)	110, 436, 685, 808, 1273, 2365
BccI	CCATC	5 cut(s)	65, 785, 912, 1373, 1918
BceAI	ACGGC	2 cut(s)	641, 2287
BciT130I	CCWGG	4 cut(s)	141, 444, 974, 2093
BcnI	CCSGG	4 cut(s)	1559, 1947, 1968, 2172
BcoDI	GTCTC	3 cut(s)	84, 613, 724
BfaI	CTAG	3 cut(s)	378, 1056, 1109
BfmI	CTRYAG	3 cut(s)	87, 2027, 2126
BfoI	RGCGCY	1 cut(s)	1805
BfuAI	ACCTGC	3 cut(s)	366, 523, 2321
BlpI	GCTNAGC	1 cut(s)	1783
BmcAI	AGTACT	1 cut(s)	1050
Bme1390I	CCNGG	8 cut(s)	141, 444, 974, 1559, 1947, 1968, 2093, 2172
Bme18I	GGWCC	5 cut(s)	164, 218, 275, 1949, 2174
BmgBI	CACGTC	2 cut(s)	399, 481
BmgT120I	GGNCC	7 cut(s)	164, 218, 275, 1574, 1949, 2174, 2273
BmiI	GGNNCC	4 cut(s)	6, 165, 277, 1950
BmrFI	CCNGG	8 cut(s)	141, 444, 974, 1559, 1947, 1968, 2093, 2172
BmrI	ACTGGG	1 cut(s)	156
BmuI	ACTGGG	1 cut(s)	156
BplI	GAGNNNNNCTC	2 cut(s)	881, 913
BpmI	CTGGAG	2 cut(s)	42, 1610
Bpu1102I	GCTNAGC	1 cut(s)	1783
BpuEI	CTTGAG	1 cut(s)	124
BpuMI	CCSGG	4 cut(s)	1559, 1947, 1968, 2172
Bsa29I	ATCGAT	2 cut(s)	1092, 1548
BsaAI	YACGTR	1 cut(s)	437
BsaHI	GRCGYC	1 cut(s)	1276
BsaJI	CCNNGG	6 cut(s)	64, 426, 494, 577, 972, 2086
BsaWI	WCCGGW	1 cut(s)	166
BsaXI	ACNNNNNCTCC	6 cut(s)	423, 453, 1448, 1478, 2281, 2311
Bse1I	ACTGG	3 cut(s)	151, 412, 1761
Bse3DI	GCAATG	1 cut(s)	2412
BseBI	CCWGG	4 cut(s)	141, 444, 974, 2093
BseCI	ATCGAT	2 cut(s)	1092, 1548
BseDI	CCNNGG	6 cut(s)	64, 426, 494, 577, 972, 2086
BseGI	GGATG	4 cut(s)	76, 386, 991, 1717
BseMI	GCAATG	1 cut(s)	2412
BseMII	CTCAG	5 cut(s)	95, 320, 1403, 1797, 2056
BseNI	ACTGG	3 cut(s)	151, 412, 1761
BseRI	GAGGAG	1 cut(s)	1782
BseSI	GKGCMC	1 cut(s)	1273
BseYI	CCCAGC	1 cut(s)	1430
Bsh1236I	CGCG	1 cut(s)	1209
BshFI	GGCC	5 cut(s)	411, 1575, 1760, 2091, 2274
BshNI	GGYRCC	1 cut(s)	4
BshVI	ATCGAT	2 cut(s)	1092, 1548
BsiHKAI	GWGCWC	6 cut(s)	110, 436, 685, 808, 1273, 2365
BsiSI	CCGG	5 cut(s)	167, 1558, 1946, 1968, 2172
BslFI	GGGAC	6 cut(s)	191, 261, 385, 385, 1962, 1971
BsmAI	GTCTC	3 cut(s)	84, 613, 724
BsmFI	GGGAC	6 cut(s)	191, 261, 385, 385, 1962, 1971
BsmI	GAATGC	3 cut(s)	297, 1618, 2348
BsnI	GGCC	5 cut(s)	411, 1575, 1760, 2091, 2274
Bsp1286I	GDGCHC	6 cut(s)	110, 436, 685, 808, 1273, 2365
Bsp143I	GATC	8 cut(s)	460, 1068, 1373, 1396, 1545, 1990, 2112, 2452
Bsp1720I	GCTNAGC	1 cut(s)	1783
Bsp19I	CCATGG	1 cut(s)	426
Bsp68I	TCGCGA	1 cut(s)	1209
BspACI	CCGC	7 cut(s)	361, 838, 1435, 2021, 2035, 2075, 2234
BspANI	GGCC	5 cut(s)	411, 1575, 1760, 2091, 2274
BspCNI	CTCAG	5 cut(s)	94, 319, 1402, 1796, 2055
BspDI	ATCGAT	2 cut(s)	1092, 1548
BspFNI	CGCG	1 cut(s)	1209
BspHI	TCATGA	1 cut(s)	1827
BspLI	GGNNCC	4 cut(s)	6, 165, 277, 1950
BspMAI	CTGCAG	2 cut(s)	2031, 2130
BspMI	ACCTGC	3 cut(s)	366, 523, 2321
BspPI	GGATC	4 cut(s)	455, 1381, 1404, 2107
BspQI	GCTCTTC	1 cut(s)	1278
BspT107I	GGYRCC	1 cut(s)	4
BsrDI	GCAATG	1 cut(s)	2412
BsrI	ACTGG	3 cut(s)	151, 412, 1761
BssECI	CCNNGG	6 cut(s)	64, 426, 494, 577, 972, 2086
BssMI	GATC	8 cut(s)	460, 1068, 1373, 1396, 1545, 1990, 2112, 2452
BssNAI	GTATAC	1 cut(s)	1186
BssNI	GRCGYC	1 cut(s)	1276
BssSI	CACGAG	1 cut(s)	903
BssT1I	CCWWGG	4 cut(s)	64, 426, 577, 2086
Bst1107I	GTATAC	1 cut(s)	1186
Bst2BI	CACGAG	1 cut(s)	903
Bst2UI	CCWGG	4 cut(s)	141, 444, 974, 2093
Bst4CI	ACNGT	5 cut(s)	498, 594, 2150, 2257, 2297
Bst6I	CTCTTC	6 cut(s)	130, 1018, 1278, 1869, 2172, 2329
BstACI	GRCGYC	1 cut(s)	1276
BstAPI	GCANNNNNTGC	5 cut(s)	292, 538, 550, 1639, 2125
BstBAI	YACGTR	1 cut(s)	437
BstC8I	GCNNGC	4 cut(s)	762, 1443, 1676, 2057
BstDEI	CTNAG	6 cut(s)	81, 306, 909, 1389, 1783, 2042
BstDSI	CCRYGG	2 cut(s)	426, 494
BstENI	CCTNNNNNAGG	1 cut(s)	1923
BstF5I	GGATG	4 cut(s)	76, 386, 991, 1717
BstFNI	CGCG	1 cut(s)	1209
BstH2I	RGCGCY	1 cut(s)	1805
BstHHI	GCGC	2 cut(s)	958, 1804
BstKTI	GATC	8 cut(s)	463, 1071, 1376, 1399, 1548, 1993, 2115, 2455
BstMAI	GTCTC	3 cut(s)	84, 613, 724
BstMBI	GATC	8 cut(s)	460, 1068, 1373, 1396, 1545, 1990, 2112, 2452
BstNI	CCWGG	4 cut(s)	141, 444, 974, 2093
BstNSI	RCATGY	3 cut(s)	602, 1610, 1678
BstSCI	CCNGG	8 cut(s)	139, 442, 972, 1557, 1945, 1966, 2091, 2170
BstSFI	CTRYAG	3 cut(s)	87, 2027, 2126
BstSLI	GKGCMC	1 cut(s)	1273
BstUI	CGCG	1 cut(s)	1209
BstX2I	RGATCY	3 cut(s)	460, 1373, 1396
BstXI	CCANNNNNNTGG	1 cut(s)	71
BstYI	RGATCY	3 cut(s)	460, 1373, 1396
BstZ17I	GTATAC	1 cut(s)	1186
Bsu15I	ATCGAT	2 cut(s)	1092, 1548
BsuRI	GGCC	5 cut(s)	411, 1575, 1760, 2091, 2274
BsuTUI	ATCGAT	2 cut(s)	1092, 1548
BtgI	CCRYGG	2 cut(s)	426, 494
BtrI	CACGTC	2 cut(s)	399, 481
BtsCI	GGATG	4 cut(s)	76, 386, 991, 1717
BtsI	GCAGTG	4 cut(s)	208, 1001, 1087, 1978
BtsIMutI	CAGTG	6 cut(s)	208, 1001, 1087, 1466, 1978, 2155
BtuMI	TCGCGA	1 cut(s)	1209
BveI	ACCTGC	3 cut(s)	366, 523, 2321
Cac8I	GCNNGC	4 cut(s)	762, 1443, 1676, 2057
CaiI	CAGNNNCTG	5 cut(s)	358, 1468, 1822, 2122, 2237
CciI	TCATGA	1 cut(s)	1827
CfoI	GCGC	2 cut(s)	958, 1804
Cfr13I	GGNCC	7 cut(s)	164, 218, 275, 1574, 1949, 2174, 2273
ClaI	ATCGAT	2 cut(s)	1092, 1548
CseI	GACGC	2 cut(s)	770, 1284
Csp6I	GTAC	4 cut(s)	263, 1049, 1356, 1724
CviQI	GTAC	4 cut(s)	263, 1049, 1356, 1724
DdeI	CTNAG	6 cut(s)	81, 306, 909, 1389, 1783, 2042
DpnI	GATC	8 cut(s)	462, 1070, 1375, 1398, 1547, 1992, 2114, 2454
DpnII	GATC	8 cut(s)	460, 1068, 1373, 1396, 1545, 1990, 2112, 2452
DraI	TTTAAA	1 cut(s)	1245
EaeI	YGGCCR	2 cut(s)	409, 1758
Eam1104I	CTCTTC	6 cut(s)	130, 1018, 1278, 1869, 2172, 2329
EarI	CTCTTC	6 cut(s)	130, 1018, 1278, 1869, 2172, 2329
Ecl136II	GAGCTC	1 cut(s)	108
Eco130I	CCWWGG	4 cut(s)	64, 426, 577, 2086
Eco24I	GRGCYC	1 cut(s)	110
Eco32I	GATATC	2 cut(s)	505, 1515
Eco47I	GGWCC	5 cut(s)	164, 218, 275, 1949, 2174
Eco47III	AGCGCT	1 cut(s)	1803
Eco53kI	GAGCTC	1 cut(s)	108
Eco57I	CTGAAG	1 cut(s)	2310
Eco72I	CACGTG	1 cut(s)	437
EcoICRI	GAGCTC	1 cut(s)	108
EcoNI	CCTNNNNNAGG	1 cut(s)	1923
EcoRI	GAATTC	4 cut(s)	301, 319, 1846, 2423
EcoRII	CCWGG	4 cut(s)	139, 442, 972, 2091
EcoRV	GATATC	2 cut(s)	505, 1515
EcoT14I	CCWWGG	4 cut(s)	64, 426, 577, 2086
EcoT22I	ATGCAT	2 cut(s)	991, 2350
EcoT38I	GRGCYC	1 cut(s)	110
ErhI	CCWWGG	4 cut(s)	64, 426, 577, 2086
FalI	AAGNNNNNCTT	4 cut(s)	405, 437, 1275, 1307
FaqI	GGGAC	6 cut(s)	191, 261, 385, 385, 1962, 1971
FauNDI	CATATG	1 cut(s)	787
FblI	GTMKAC	1 cut(s)	1185
FokI	GGATG	4 cut(s)	83, 373, 998, 1704
FriOI	GRGCYC	1 cut(s)	110
FspBI	CTAG	3 cut(s)	378, 1056, 1109
GlaI	GCGC	2 cut(s)	957, 1803
GsaI	CCCAGC	1 cut(s)	1434
GsuI	CTGGAG	2 cut(s)	42, 1610
HaeII	RGCGCY	1 cut(s)	1805
HaeIII	GGCC	5 cut(s)	411, 1575, 1760, 2091, 2274
HapII	CCGG	5 cut(s)	167, 1558, 1946, 1968, 2172
HgaI	GACGC	2 cut(s)	770, 1284
HhaI	GCGC	2 cut(s)	958, 1804
Hin1I	GRCGYC	1 cut(s)	1276
Hin6I	GCGC	2 cut(s)	956, 1802
HinP1I	GCGC	2 cut(s)	956, 1802
HincII	GTYRAC	1 cut(s)	94
HindII	GTYRAC	1 cut(s)	94
HindIII	AAGCTT	1 cut(s)	750
HinfI	GANTC	6 cut(s)	563, 586, 607, 1086, 1819, 2321
HpaI	GTTAAC	1 cut(s)	94
HpaII	CCGG	5 cut(s)	167, 1558, 1946, 1968, 2172
HphI	GGTGA	1 cut(s)	1908
Hpy166II	GTNNAC	5 cut(s)	94, 1186, 1233, 1271, 1528
Hpy188I	TCNGA	6 cut(s)	1378, 1425, 1519, 1698, 2016, 2358
Hpy8I	GTNNAC	5 cut(s)	94, 1186, 1233, 1271, 1528
Hpy99I	CGWCG	1 cut(s)	1278
HpyAV	CCTTC	6 cut(s)	18, 431, 1146, 1585, 2393, 2476
HpyCH4III	ACNGT	5 cut(s)	498, 594, 2150, 2257, 2297
HpyCH4IV	ACGT	3 cut(s)	398, 436, 480
HpyF3I	CTNAG	6 cut(s)	81, 306, 909, 1389, 1783, 2042
HpySE526I	ACGT	3 cut(s)	398, 436, 480
Hsp92I	GRCGYC	1 cut(s)	1276
HspAI	GCGC	2 cut(s)	956, 1802
KspAI	GTTAAC	1 cut(s)	94
Kzo9I	GATC	8 cut(s)	460, 1068, 1373, 1396, 1545, 1990, 2112, 2452
LguI	GCTCTTC	1 cut(s)	1278
LmnI	GCTCC	6 cut(s)	431, 1315, 1629, 1651, 1769, 2284
MaeI	CTAG	3 cut(s)	378, 1056, 1109
MaeII	ACGT	3 cut(s)	398, 436, 480
MalI	GATC	8 cut(s)	462, 1070, 1375, 1398, 1547, 1992, 2114, 2454
MboI	GATC	8 cut(s)	460, 1068, 1373, 1396, 1545, 1990, 2112, 2452
MfeI	CAATTG	2 cut(s)	671, 1578
MflI	RGATCY	3 cut(s)	460, 1373, 1396
MhlI	GDGCHC	6 cut(s)	110, 436, 685, 808, 1273, 2365
MlsI	TGGCCA	2 cut(s)	411, 1760
MluNI	TGGCCA	2 cut(s)	411, 1760
MlyI	GAGTC	2 cut(s)	1095, 2315
MmeI	TCCRAC	3 cut(s)	480, 1923, 2276
Mox20I	TGGCCA	2 cut(s)	411, 1760
Mph1103I	ATGCAT	2 cut(s)	991, 2350
MroXI	GAANNNNTTC	1 cut(s)	1287
MscI	TGGCCA	2 cut(s)	411, 1760
MseI	TTAA	8 cut(s)	29, 93, 197, 774, 1062, 1244, 1940, 2445
MslI	CAYNNNNRTG	3 cut(s)	994, 1345, 1611
Msp20I	TGGCCA	2 cut(s)	411, 1760
MspA1I	CMGCKG	6 cut(s)	838, 851, 1430, 2026, 2035, 2234
MspI	CCGG	5 cut(s)	167, 1558, 1946, 1968, 2172
MspR9I	CCNGG	8 cut(s)	141, 444, 974, 1559, 1947, 1968, 2093, 2172
MunI	CAATTG	2 cut(s)	671, 1578
Mva1269I	GAATGC	3 cut(s)	297, 1618, 2348
MvaI	CCWGG	4 cut(s)	141, 444, 974, 2093
MvnI	CGCG	1 cut(s)	1209
NciI	CCSGG	4 cut(s)	1559, 1947, 1968, 2172
NcoI	CCATGG	1 cut(s)	426
NdeI	CATATG	1 cut(s)	787
NdeII	GATC	8 cut(s)	460, 1068, 1373, 1396, 1545, 1990, 2112, 2452
NlaIV	GGNNCC	4 cut(s)	6, 165, 277, 1950
NmuCI	GTSAC	7 cut(s)	244, 883, 998, 1464, 1914, 2037, 2267
NruI	TCGCGA	1 cut(s)	1209
NsiI	ATGCAT	2 cut(s)	991, 2350
NspI	RCATGY	3 cut(s)	602, 1610, 1678
OliI	CACNNNNGTG	1 cut(s)	1345
PaeI	GCATGC	1 cut(s)	1678
PagI	TCATGA	1 cut(s)	1827
PaqCI	CACCTGC	3 cut(s)	366, 523, 2321
PciSI	GCTCTTC	1 cut(s)	1278
PctI	GAATGC	3 cut(s)	297, 1618, 2348
PdmI	GAANNNNTTC	1 cut(s)	1287
PfeI	GAWTC	4 cut(s)	563, 586, 607, 1819
PflMI	CCANNNNNTGG	3 cut(s)	227, 791, 1756
PfoI	TCCNGGA	3 cut(s)	139, 442, 2170
PleI	GAGTC	2 cut(s)	1094, 2315
PmaCI	CACGTG	1 cut(s)	437
PmlI	CACGTG	1 cut(s)	437
PpsI	GAGTC	2 cut(s)	1094, 2315
Ppu21I	YACGTR	1 cut(s)	437
PshBI	ATTAAT	1 cut(s)	774
Psp124BI	GAGCTC	1 cut(s)	110
Psp6I	CCWGG	4 cut(s)	139, 442, 972, 2091
PspCI	CACGTG	1 cut(s)	437
PspFI	CCCAGC	1 cut(s)	1430
PspGI	CCWGG	4 cut(s)	139, 442, 972, 2091
PspN4I	GGNNCC	4 cut(s)	6, 165, 277, 1950
PspPI	GGNCC	7 cut(s)	164, 218, 275, 1574, 1949, 2174, 2273
PstI	CTGCAG	2 cut(s)	2031, 2130
PstNI	CAGNNNCTG	5 cut(s)	358, 1468, 1822, 2122, 2237
PsuI	RGATCY	3 cut(s)	460, 1373, 1396
PvuII	CAGCTG	3 cut(s)	851, 1430, 2026
RruI	TCGCGA	1 cut(s)	1209
RsaI	GTAC	4 cut(s)	264, 1050, 1357, 1725
RsaNI	GTAC	4 cut(s)	263, 1049, 1356, 1724
RseI	CAYNNNNRTG	3 cut(s)	994, 1345, 1611
SacI	GAGCTC	1 cut(s)	110
SapI	GCTCTTC	1 cut(s)	1278
SaqAI	TTAA	8 cut(s)	29, 93, 197, 774, 1062, 1244, 1940, 2445
Sau3AI	GATC	8 cut(s)	460, 1068, 1373, 1396, 1545, 1990, 2112, 2452
Sau96I	GGNCC	7 cut(s)	164, 218, 275, 1574, 1949, 2174, 2273
ScaI	AGTACT	1 cut(s)	1050
SchI	GAGTC	2 cut(s)	1095, 2315
ScrFI	CCNGG	8 cut(s)	141, 444, 974, 1559, 1947, 1968, 2093, 2172
SduI	GDGCHC	6 cut(s)	110, 436, 685, 808, 1273, 2365
SfcI	CTRYAG	3 cut(s)	87, 2027, 2126
SinI	GGWCC	5 cut(s)	164, 218, 275, 1949, 2174
SmiMI	CAYNNNNRTG	3 cut(s)	994, 1345, 1611
SmlI	CTYRAG	1 cut(s)	103
SmoI	CTYRAG	1 cut(s)	103
SphI	GCATGC	1 cut(s)	1678
SsiI	CCGC	7 cut(s)	361, 838, 1435, 2021, 2035, 2075, 2234
SspMI	CTAG	3 cut(s)	378, 1056, 1109
SstI	GAGCTC	1 cut(s)	110
StyD4I	CCNGG	8 cut(s)	139, 442, 972, 1557, 1945, 1966, 2091, 2170
StyI	CCWWGG	4 cut(s)	64, 426, 577, 2086
TaaI	ACNGT	5 cut(s)	498, 594, 2150, 2257, 2297
TaiI	ACGT	3 cut(s)	401, 439, 483
TaqI	TCGA	6 cut(s)	44, 1032, 1092, 1548, 1603, 1765
TatI	WGTACW	2 cut(s)	262, 1048
TauI	GCSGC	4 cut(s)	364, 841, 1438, 2237
TfiI	GAWTC	4 cut(s)	563, 586, 607, 1819
Tru1I	TTAA	8 cut(s)	29, 93, 197, 774, 1062, 1244, 1940, 2445
Tru9I	TTAA	8 cut(s)	29, 93, 197, 774, 1062, 1244, 1940, 2445
TscAI	CASTG	6 cut(s)	208, 1001, 1087, 1473, 1978, 2155
TseFI	GTSAC	7 cut(s)	244, 883, 998, 1464, 1914, 2037, 2267
Tsp45I	GTSAC	7 cut(s)	244, 883, 998, 1464, 1914, 2037, 2267
TspDTI	ATGAA	7 cut(s)	30, 197, 1296, 1550, 1754, 1859, 2375
TspGWI	ACGGA	1 cut(s)	598
TspRI	CASTG	6 cut(s)	208, 1001, 1087, 1473, 1978, 2155
Van91I	CCANNNNNTGG	3 cut(s)	227, 791, 1756
VneI	GTGCAC	1 cut(s)	1269
VpaK11BI	GGWCC	5 cut(s)	164, 218, 275, 1949, 2174
VspI	ATTAAT	1 cut(s)	774
XagI	CCTNNNNNAGG	1 cut(s)	1923
XbaI	TCTAGA	1 cut(s)	1108
XceI	RCATGY	3 cut(s)	602, 1610, 1678
XmiI	GTMKAC	1 cut(s)	1185
XmnI	GAANNNNTTC	1 cut(s)	1287
XspI	CTAG	3 cut(s)	378, 1056, 1109
ZrmI	AGTACT	1 cut(s)	1050
Zsp2I	ATGCAT	2 cut(s)	991, 2350

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.