Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0004096

Physical Location & Seq

Genomic Coordinates Reverse (-)

50677580 .. 50682004

Gene Structure 4425 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0398300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGTCTCTCAGCAGAAACTATAAAAGCAGAATTGTATTCTCCATTATTTATTTATATTCAAAAGCGGTTCGTAATTTGGATTCGATTTGTTCTCTGTGTTTTCTTCGAGTTCGAGAGACAATGGTTAGGGCTAAGCTTCTCATTCTGCTAGTATTGTTCTCAGTGTTCTTCGTCCATTCAAATGCCGGAGAAGAAGAAGAAGAGGCTTTCGACGTTCGCCAACACCTTTCTTCTGTGTCCAGATATAAAGACATCGCCGGCAATTCATTTGTAGCATCTGAAATTCCAGATGGATGCACTCCCATTCACTTGAATCTTGTGGCCAGGCATGGAACTCGTTCTCCTACAAAGAAACGGATGAAGGAGTTGGACAACCTGGCAGCTCGTCTGGCTTCGTTAGTGAAAGAAGCAGAAGAACAGAAGCTGCCTTTGCAAAACCTTCCCGGTTGGTTAAAGGAATGGGAGTCGCCTTGGAAGGGAAAACAAAATGGTGGACAATTGACTGCCCAGGGAGAGGAAGAGCTCTATGAACTGGGAATTAGGACTAGAGAAAGATTTCCAAATCTGTTTGATGAGGACTACCATCCAAATGTTTATCCCATCAAGTCTTCTCAGATCCCTCGGGCGTCAGCCAGTGCTGTGGCATTTGGCATGGCGTTGTTCAGTGGCAAAGGAAATCTTGGGCCAGGCAAACATCAAGCTTTTGCTGTAACCAGTGAAAGCCGTGCGAGTGACATAGTGCTGAGGTTTCATGATTGTTGCAATAACTACAAGGACTATCGGAAAAGTCAGGAGCCATCTGTTAATAAACTTAAGGAACCAGTCTTTGATGAAATTACTTCTGCATTAACTAAGCGCTACAAGTTGAACTTTACAAGGCAGGACACGTCTTCTCTCTGGTTTCTGTGCAAACAGGAGGCGTCGTTGTTGAACGTAACTGATCAAGCTTGTGCGCTTTTCAACCCCTCTGAGGTTGCTTTGCTGGAGTGGACAGATGATTTGGAGGCCTTTATATTGAAGGGGTATGGTAAAGCTTTGAACTATAGAATGGGGGTGCCCTTGCTAAAAGATGTTGTGCAATCTATGGATCAGGCTATTGAGGCCCACGAAGAAAAACATGCTCCTGGCACTTATGAAAAGGCAAGGATGAGGTTTGCACACGCAGAAACTGTGGTTCCATTTTCATGCTTGCTCGGGCTTTTTCTTGAAGGATCTGAATTTCAACAAATAAAGAGGGAACAGCCCTTGGAACACCCTCCAAAGCCTCCCCAGAAAAGAAATTGGAAGTGCAGCAATGTGGCACCTTTTGGTGGGAATAACATGCTTGTTCTGTACAGCTGTCCAGCCAAAAGTTCAAGCAAGTACTTTGTGCAAGTGTTGCACAATGAGCATCCCGTTCCTGTGCCTGGTTGTGATGGTTCTGACCTTTGCCCACTTGATGTTTTCAAGGAAAAAGTAGTTGCTCCTCATTTGAAGCATGACTACAATGCAGTATGCAATATAAAAGCGGGACAGCAGGAGCAGAAGCCTGCAACCAAAGTCTCTGCAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001666 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009909 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010044 GO:0010154 GO:0010243 GO:0010272 GO:0014070 GO:0022414 GO:0032501 GO:0032502 GO:0033554 GO:0035670 GO:0036293 GO:0042221 GO:0042493 GO:0043207 GO:0046677 GO:0046898 GO:0046982 GO:0046983 GO:0047484 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048519 GO:0048580 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060090 GO:0060992 GO:0061458 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0080134 GO:0090567 GO:0097159 GO:0097305 GO:0099402 GO:1901000 GO:1901001 GO:1901363 GO:1901654 GO:1901698 GO:1901700 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LIM_bind

Protein Analysis

517

Amino Acids

58.27

Weight (kDa)

8.42

Isoelectric Point (pI)

45.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
His_Phos_2	PF00328	103 - 462	4.5e-57	Histidine phosphatase superfamily (branch 2)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004096)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62090 AT5G62090 AT5G62090
fragaria_vesca	FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060
malus_domestica	MD01G1197300.v1.1 MD07G1264600.v1.1
prunus_persica	Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1
pyrus_communis	pycom01g20770 pycom07g24320
rosa_chinensis	RchiOBHm_Chr1g0376781
rosa_laevigata	RLG00000026560 RLG00000026570 RLG00000026571
rosa_multiflora	Rmu_sc0002113.1_g000009
rosa_roxburghii	Rroxscaffold_4G00281740
rosa_rugosa	Rorug01G0398100 Rorug01G0398200.1 Rorug01G0398300 Rorug01G0398300
rosa_samantha	Rh1AG415500 Rh1BG375000 Rh1CG388800 Rh1DG405600
rosa_wichuraiana	Rw1G036450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1054, 1300
AciI	CCGC	2 cut(s)	65, 1508
AclWI	GGATC	3 cut(s)	610, 1095, 1219
AcoI	YGGCCR	1 cut(s)	321
AcsI	RAATTY	2 cut(s)	282, 1217
AcyI	GRCGYC	2 cut(s)	626, 920
AfaI	GTAC	2 cut(s)	1334, 1364
AfeI	AGCGCT	1 cut(s)	857
AfiI	CCNNNNNNNGG	5 cut(s)	476, 514, 970, 1310, 1406
AflII	CTTAAG	1 cut(s)	812
AflIII	ACRYGT	1 cut(s)	885
AjiI	CACGTC	1 cut(s)	888
AjnI	CCWGG	6 cut(s)	323, 375, 507, 685, 1123, 1405
AloI	GAACNNNNNNTCC	2 cut(s)	325, 357
AluBI	AGCT	8 cut(s)	136, 383, 424, 523, 701, 947, 1034, 1338
AluI	AGCT	8 cut(s)	136, 383, 424, 523, 701, 947, 1034, 1338
Alw21I	GWGCWC	1 cut(s)	525
Alw26I	GTCTC	3 cut(s)	9, 110, 1546
AlwI	GGATC	3 cut(s)	610, 1095, 1219
AlwNI	CAGNNNCTG	2 cut(s)	424, 1169
Ama87I	CYCGRG	2 cut(s)	621, 1193
Aor51HI	AGCGCT	1 cut(s)	857
AoxI	GGCC	4 cut(s)	321, 683, 1005, 1101
ApeKI	GCWGC	3 cut(s)	380, 424, 1290
ApoI	RAATTY	2 cut(s)	282, 1217
ArsI	GACNNNNNNTTYG	2 cut(s)	982, 1014
Asp700I	GAANNNNTTC	2 cut(s)	337, 555
AspLEI	GCGC	2 cut(s)	858, 955
AspS9I	GGNCC	2 cut(s)	683, 1102
AsuC2I	CCSGG	1 cut(s)	444
AvaI	CYCGRG	2 cut(s)	621, 1193
BaeGI	GKGCMC	1 cut(s)	1059
BalI	TGGCCA	1 cut(s)	323
BanI	GGYRCC	2 cut(s)	1054, 1300
BanII	GRGCYC	1 cut(s)	525
BarI	GAAGNNNNNNTAC	2 cut(s)	1466, 1498
BbsI	GAAGAC	2 cut(s)	600, 882
Bbv12I	GWGCWC	1 cut(s)	525
BbvCI	CCTCAGC	1 cut(s)	743
BbvI	GCAGC	3 cut(s)	392, 411, 1302
BccI	CCATC	5 cut(s)	284, 591, 608, 805, 1409
BceAI	ACGGC	1 cut(s)	708
BcgI	CGANNNNNNTGC	2 cut(s)	317, 351
BciT130I	CCWGG	6 cut(s)	325, 377, 509, 687, 1125, 1407
BclI	TGATCA	1 cut(s)	940
BcnI	CCSGG	1 cut(s)	444
BcoDI	GTCTC	3 cut(s)	9, 110, 1546
BfaI	CTAG	2 cut(s)	149, 546
BfmI	CTRYAG	2 cut(s)	1042, 1545
BfoI	RGCGCY	1 cut(s)	859
BfrI	CTTAAG	1 cut(s)	812
BisI	GCNGC	3 cut(s)	381, 425, 1291
BlpI	GCTNAGC	1 cut(s)	132
BlsI	GCNGC	3 cut(s)	382, 426, 1292
BmcAI	AGTACT	1 cut(s)	1364
Bme1390I	CCNGG	7 cut(s)	325, 377, 444, 509, 687, 1125, 1407
BmeT110I	CYCGRG	2 cut(s)	621, 1193
BmgBI	CACGTC	1 cut(s)	888
BmgT120I	GGNCC	2 cut(s)	683, 1102
BmiI	GGNNCC	5 cut(s)	795, 819, 1056, 1176, 1302
BmrFI	CCNGG	7 cut(s)	325, 377, 444, 509, 687, 1125, 1407
BmrI	ACTGGG	1 cut(s)	542
BmsI	GCATC	3 cut(s)	284, 284, 1399
BmuI	ACTGGG	1 cut(s)	542
BpiI	GAAGAC	2 cut(s)	600, 882
BpmI	CTGGAG	1 cut(s)	1004
Bpu10I	CCTNAGC	1 cut(s)	743
Bpu1102I	GCTNAGC	1 cut(s)	132
BpuMI	CCSGG	1 cut(s)	444
BsaHI	GRCGYC	2 cut(s)	626, 920
BsaJI	CCNNGG	5 cut(s)	470, 507, 508, 620, 1245
BsaXI	ACNNNNNCTCC	4 cut(s)	325, 355, 908, 938
Bsc4I	CCNNNNNNNGG	5 cut(s)	476, 514, 970, 1310, 1406
Bse118I	RCCGGY	1 cut(s)	257
Bse1I	ACTGG	4 cut(s)	537, 633, 714, 821
Bse3DI	GCAATG	1 cut(s)	1300
BseBI	CCWGG	6 cut(s)	325, 377, 509, 687, 1125, 1407
BseDI	CCNNGG	5 cut(s)	470, 507, 508, 620, 1245
BseGI	GGATG	5 cut(s)	299, 363, 583, 1152, 1390
BseLI	CCNNNNNNNGG	5 cut(s)	476, 514, 970, 1310, 1406
BseMI	GCAATG	1 cut(s)	1300
BseMII	CTCAG	5 cut(s)	22, 174, 626, 734, 960
BseNI	ACTGG	4 cut(s)	537, 633, 714, 821
BseRI	GAGGAG	1 cut(s)	1455
BseSI	GKGCMC	1 cut(s)	1059
BseXI	GCAGC	3 cut(s)	392, 411, 1302
BsgI	GTGCAG	1 cut(s)	1309
BshFI	GGCC	4 cut(s)	323, 685, 1007, 1103
BshNI	GGYRCC	2 cut(s)	1054, 1300
BsiHKAI	GWGCWC	1 cut(s)	525
BsiHKCI	CYCGRG	2 cut(s)	621, 1193
BsiSI	CCGG	3 cut(s)	186, 258, 444
BslFI	GGGAC	1 cut(s)	1524
BslI	CCNNNNNNNGG	5 cut(s)	476, 514, 970, 1310, 1406
BsmAI	GTCTC	3 cut(s)	9, 110, 1546
BsmFI	GGGAC	1 cut(s)	1524
BsnI	GGCC	4 cut(s)	323, 685, 1007, 1103
BsoBI	CYCGRG	2 cut(s)	621, 1193
Bsp1286I	GDGCHC	2 cut(s)	525, 1059
Bsp1407I	TGTACA	1 cut(s)	1332
Bsp143I	GATC	4 cut(s)	615, 940, 1087, 1211
Bsp1720I	GCTNAGC	1 cut(s)	132
BspACI	CCGC	2 cut(s)	65, 1508
BspANI	GGCC	4 cut(s)	323, 685, 1007, 1103
BspCNI	CTCAG	5 cut(s)	21, 173, 625, 735, 961
BspHI	TCATGA	1 cut(s)	751
BspLI	GGNNCC	5 cut(s)	795, 819, 1056, 1176, 1302
BspMAI	CTGCAG	1 cut(s)	1549
BspPI	GGATC	3 cut(s)	610, 1095, 1219
BspQI	GCTCTTC	1 cut(s)	513
BspT107I	GGYRCC	2 cut(s)	1054, 1300
BspTI	CTTAAG	1 cut(s)	812
BsrDI	GCAATG	1 cut(s)	1300
BsrFI	RCCGGY	1 cut(s)	257
BsrGI	TGTACA	1 cut(s)	1332
BsrI	ACTGG	4 cut(s)	537, 633, 714, 821
BssAI	RCCGGY	1 cut(s)	257
BssECI	CCNNGG	5 cut(s)	470, 507, 508, 620, 1245
BssMI	GATC	4 cut(s)	615, 940, 1087, 1211
BssNI	GRCGYC	2 cut(s)	626, 920
BssT1I	CCWWGG	2 cut(s)	470, 1245
Bst2UI	CCWGG	6 cut(s)	325, 377, 509, 687, 1125, 1407
Bst4CI	ACNGT	1 cut(s)	1171
Bst6I	CTCTTC	2 cut(s)	195, 513
BstACI	GRCGYC	2 cut(s)	626, 920
BstAFI	CTTAAG	1 cut(s)	812
BstAPI	GCANNNNNTGC	1 cut(s)	1378
BstAUI	TGTACA	1 cut(s)	1332
BstC8I	GCNNGC	3 cut(s)	259, 1190, 1530
BstDEI	CTNAG	7 cut(s)	8, 132, 160, 612, 743, 852, 969
BstF5I	GGATG	5 cut(s)	299, 363, 583, 1152, 1390
BstH2I	RGCGCY	1 cut(s)	859
BstHHI	GCGC	2 cut(s)	858, 955
BstKTI	GATC	4 cut(s)	618, 943, 1090, 1214
BstMAI	GTCTC	3 cut(s)	9, 110, 1546
BstMBI	GATC	4 cut(s)	615, 940, 1087, 1211
BstMWI	GCNNNNNNNGC	5 cut(s)	389, 430, 1100, 1378, 1387
BstNI	CCWGG	6 cut(s)	325, 377, 509, 687, 1125, 1407
BstNSI	RCATGY	2 cut(s)	1121, 1324
BstSCI	CCNGG	7 cut(s)	323, 375, 442, 507, 685, 1123, 1405
BstSFI	CTRYAG	2 cut(s)	1042, 1545
BstSLI	GKGCMC	1 cut(s)	1059
BstV1I	GCAGC	3 cut(s)	392, 411, 1302
BstV2I	GAAGAC	2 cut(s)	600, 882
BstX2I	RGATCY	2 cut(s)	615, 1211
BstXI	CCANNNNNNTGG	1 cut(s)	640
BstYI	RGATCY	2 cut(s)	615, 1211
BsuRI	GGCC	4 cut(s)	323, 685, 1007, 1103
BtgZI	GCGATG	1 cut(s)	238
BtrI	CACGTC	1 cut(s)	888
BtsCI	GGATG	5 cut(s)	299, 363, 583, 1152, 1390
BtsIMutI	CAGTG	4 cut(s)	168, 640, 670, 721
Cac8I	GCNNGC	3 cut(s)	259, 1190, 1530
CaiI	CAGNNNCTG	2 cut(s)	424, 1169
CciI	TCATGA	1 cut(s)	751
CfoI	GCGC	2 cut(s)	858, 955
Cfr10I	RCCGGY	1 cut(s)	257
Cfr13I	GGNCC	2 cut(s)	683, 1102
CseI	GACGC	2 cut(s)	615, 909
Csp6I	GTAC	2 cut(s)	1333, 1363
CviAII	CATG	7 cut(s)	329, 652, 752, 1118, 1185, 1321, 1478
CviQI	GTAC	2 cut(s)	1333, 1363
DdeI	CTNAG	7 cut(s)	8, 132, 160, 612, 743, 852, 969
DpnI	GATC	4 cut(s)	617, 942, 1089, 1213
DpnII	GATC	4 cut(s)	615, 940, 1087, 1211
EaeI	YGGCCR	1 cut(s)	321
Eam1104I	CTCTTC	2 cut(s)	195, 513
EarI	CTCTTC	2 cut(s)	195, 513
Ecl136II	GAGCTC	1 cut(s)	523
Eco130I	CCWWGG	2 cut(s)	470, 1245
Eco147I	AGGCCT	1 cut(s)	1007
Eco24I	GRGCYC	1 cut(s)	525
Eco47III	AGCGCT	1 cut(s)	857
Eco53kI	GAGCTC	1 cut(s)	523
Eco88I	CYCGRG	2 cut(s)	621, 1193
EcoICRI	GAGCTC	1 cut(s)	523
EcoRII	CCWGG	6 cut(s)	323, 375, 507, 685, 1123, 1405
EcoT14I	CCWWGG	2 cut(s)	470, 1245
EcoT38I	GRGCYC	1 cut(s)	525
ErhI	CCWWGG	2 cut(s)	470, 1245
FaeI	CATG	7 cut(s)	332, 655, 755, 1121, 1188, 1324, 1481
FalI	AAGNNNNNCTT	4 cut(s)	663, 695, 854, 886
FaqI	GGGAC	1 cut(s)	1524
FatI	CATG	7 cut(s)	328, 651, 751, 1117, 1184, 1320, 1477
FauI	CCCGC	1 cut(s)	1501
FbaI	TGATCA	1 cut(s)	940
Fnu4HI	GCNGC	3 cut(s)	381, 425, 1291
FokI	GGATG	5 cut(s)	306, 370, 570, 1159, 1377
FriOI	GRGCYC	1 cut(s)	525
Fsp4HI	GCNGC	3 cut(s)	381, 425, 1291
FspBI	CTAG	2 cut(s)	149, 546
GlaI	GCGC	2 cut(s)	857, 954
GluI	GCNGC	3 cut(s)	381, 425, 1291
GsuI	CTGGAG	1 cut(s)	1004
HaeII	RGCGCY	1 cut(s)	859
HaeIII	GGCC	4 cut(s)	323, 685, 1007, 1103
HapII	CCGG	3 cut(s)	186, 258, 444
HgaI	GACGC	2 cut(s)	615, 909
HhaI	GCGC	2 cut(s)	858, 955
Hin1I	GRCGYC	2 cut(s)	626, 920
Hin1II	CATG	7 cut(s)	332, 655, 755, 1121, 1188, 1324, 1481
Hin6I	GCGC	2 cut(s)	856, 953
HinP1I	GCGC	2 cut(s)	856, 953
HindIII	AAGCTT	4 cut(s)	134, 699, 945, 1032
HinfI	GANTC	3 cut(s)	80, 313, 464
HpaII	CCGG	3 cut(s)	186, 258, 444
Hpy166II	GTNNAC	2 cut(s)	494, 990
Hpy188I	TCNGA	6 cut(s)	280, 615, 783, 970, 1216, 1423
Hpy188III	TCNNGA	6 cut(s)	113, 240, 287, 752, 791, 1205
Hpy8I	GTNNAC	2 cut(s)	494, 990
Hpy99I	CGWCG	2 cut(s)	215, 925
HpyAV	CCTTC	5 cut(s)	355, 449, 469, 1012, 1202
HpyCH4III	ACNGT	1 cut(s)	1171
HpyCH4IV	ACGT	3 cut(s)	213, 887, 933
HpyF10VI	GCNNNNNNNGC	5 cut(s)	389, 430, 1100, 1378, 1387
HpyF3I	CTNAG	7 cut(s)	8, 132, 160, 612, 743, 852, 969
HpySE526I	ACGT	3 cut(s)	213, 887, 933
Hsp92I	GRCGYC	2 cut(s)	626, 920
Hsp92II	CATG	7 cut(s)	332, 655, 755, 1121, 1188, 1324, 1481
HspAI	GCGC	2 cut(s)	856, 953
KroI	GCCGGC	1 cut(s)	257
KroNI	GCCGGC	1 cut(s)	259
Ksp22I	TGATCA	1 cut(s)	940
Kzo9I	GATC	4 cut(s)	615, 940, 1087, 1211
LguI	GCTCTTC	1 cut(s)	513
LmnI	GCTCC	4 cut(s)	793, 1126, 1468, 1519
Lsp1109I	GCAGC	3 cut(s)	392, 411, 1302
LweI	GCATC	3 cut(s)	284, 284, 1399
MaeI	CTAG	2 cut(s)	149, 546
MaeII	ACGT	3 cut(s)	213, 887, 933
MaeIII	GTNAC	3 cut(s)	709, 731, 934
MalI	GATC	4 cut(s)	617, 942, 1089, 1213
MboI	GATC	4 cut(s)	615, 940, 1087, 1211
MfeI	CAATTG	1 cut(s)	497
MflI	RGATCY	2 cut(s)	615, 1211
MhlI	GDGCHC	2 cut(s)	525, 1059
MlsI	TGGCCA	1 cut(s)	323
MluCI	AATT	9 cut(s)	30, 73, 262, 282, 497, 537, 834, 1217, 1279
MluNI	TGGCCA	1 cut(s)	323
MlyI	GAGTC	1 cut(s)	473
MmeI	TCCRAC	1 cut(s)	348
Mox20I	TGGCCA	1 cut(s)	323
MroNI	GCCGGC	1 cut(s)	257
MroXI	GAANNNNTTC	2 cut(s)	337, 555
MscI	TGGCCA	1 cut(s)	323
MseI	TTAA	4 cut(s)	452, 804, 813, 848
MslI	CAYNNNNRTG	3 cut(s)	180, 588, 1183
Msp20I	TGGCCA	1 cut(s)	323
MspA1I	CMGCKG	1 cut(s)	1338
MspCI	CTTAAG	1 cut(s)	812
MspI	CCGG	3 cut(s)	186, 258, 444
MspR9I	CCNGG	7 cut(s)	325, 377, 444, 509, 687, 1125, 1407
MunI	CAATTG	1 cut(s)	497
MvaI	CCWGG	6 cut(s)	325, 377, 509, 687, 1125, 1407
MwoI	GCNNNNNNNGC	5 cut(s)	389, 430, 1100, 1378, 1387
NaeI	GCCGGC	1 cut(s)	259
NciI	CCSGG	1 cut(s)	444
NdeII	GATC	4 cut(s)	615, 940, 1087, 1211
NgoMIV	GCCGGC	1 cut(s)	257
NlaIII	CATG	7 cut(s)	332, 655, 755, 1121, 1188, 1324, 1481
NlaIV	GGNNCC	5 cut(s)	795, 819, 1056, 1176, 1302
NmuCI	GTSAC	1 cut(s)	731
NspI	RCATGY	2 cut(s)	1121, 1324
PagI	TCATGA	1 cut(s)	751
PasI	CCCWGGG	1 cut(s)	508
PceI	AGGCCT	1 cut(s)	1007
PciSI	GCTCTTC	1 cut(s)	513
PdiI	GCCGGC	1 cut(s)	259
PdmI	GAANNNNTTC	2 cut(s)	337, 555
PfeI	GAWTC	2 cut(s)	80, 313
PkrI	GCNGC	3 cut(s)	382, 426, 1292
PleI	GAGTC	1 cut(s)	472
PpsI	GAGTC	1 cut(s)	472
Psp124BI	GAGCTC	1 cut(s)	525
Psp6I	CCWGG	6 cut(s)	323, 375, 507, 685, 1123, 1405
PspGI	CCWGG	6 cut(s)	323, 375, 507, 685, 1123, 1405
PspN4I	GGNNCC	5 cut(s)	795, 819, 1056, 1176, 1302
PspPI	GGNCC	2 cut(s)	683, 1102
PstI	CTGCAG	1 cut(s)	1549
PstNI	CAGNNNCTG	2 cut(s)	424, 1169
PsuI	RGATCY	2 cut(s)	615, 1211
PvuII	CAGCTG	1 cut(s)	1338
RsaI	GTAC	2 cut(s)	1334, 1364
RsaNI	GTAC	2 cut(s)	1333, 1363
RseI	CAYNNNNRTG	3 cut(s)	180, 588, 1183
SacI	GAGCTC	1 cut(s)	525
SapI	GCTCTTC	1 cut(s)	513
SaqAI	TTAA	4 cut(s)	452, 804, 813, 848
SatI	GCNGC	3 cut(s)	381, 425, 1291
Sau3AI	GATC	4 cut(s)	615, 940, 1087, 1211
Sau96I	GGNCC	2 cut(s)	683, 1102
ScaI	AGTACT	1 cut(s)	1364
SchI	GAGTC	1 cut(s)	473
ScrFI	CCNGG	7 cut(s)	325, 377, 444, 509, 687, 1125, 1407
SduI	GDGCHC	2 cut(s)	525, 1059
SfaNI	GCATC	3 cut(s)	284, 284, 1399
SfcI	CTRYAG	2 cut(s)	1042, 1545
SmiMI	CAYNNNNRTG	3 cut(s)	180, 588, 1183
SmlI	CTYRAG	1 cut(s)	812
SmoI	CTYRAG	1 cut(s)	812
Sse9I	AATT	9 cut(s)	30, 73, 262, 282, 497, 537, 834, 1217, 1279
SseBI	AGGCCT	1 cut(s)	1007
SsiI	CCGC	2 cut(s)	65, 1508
SspMI	CTAG	2 cut(s)	149, 546
SstI	GAGCTC	1 cut(s)	525
StuI	AGGCCT	1 cut(s)	1007
StyD4I	CCNGG	7 cut(s)	323, 375, 442, 507, 685, 1123, 1405
StyI	CCWWGG	2 cut(s)	470, 1245
TaaI	ACNGT	1 cut(s)	1171
TaiI	ACGT	3 cut(s)	216, 890, 936
TaqI	TCGA	4 cut(s)	83, 106, 112, 210
TasI	AATT	9 cut(s)	30, 73, 262, 282, 497, 537, 834, 1217, 1279
TatI	WGTACW	2 cut(s)	1332, 1362
TfiI	GAWTC	2 cut(s)	80, 313
Tru1I	TTAA	4 cut(s)	452, 804, 813, 848
Tru9I	TTAA	4 cut(s)	452, 804, 813, 848
TscAI	CASTG	4 cut(s)	168, 640, 670, 721
TseFI	GTSAC	1 cut(s)	731
TseI	GCWGC	3 cut(s)	380, 424, 1290
Tsp45I	GTSAC	1 cut(s)	731
TspDTI	ATGAA	7 cut(s)	255, 374, 543, 740, 846, 1149, 1173
TspGWI	ACGGA	1 cut(s)	370
TspRI	CASTG	4 cut(s)	168, 640, 670, 721
Vha464I	CTTAAG	1 cut(s)	812
XapI	RAATTY	2 cut(s)	282, 1217
XceI	RCATGY	2 cut(s)	1121, 1324
XmnI	GAANNNNTTC	2 cut(s)	337, 555
XspI	CTAG	2 cut(s)	149, 546
ZrmI	AGTACT	1 cut(s)	1364

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.