Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0004096

Physical Location & Seq

Genomic Coordinates Reverse (-)

29542410 .. 29548580

Gene Structure 6171 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1197300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2601 bp

ATGGTGCCTTCTCGGGTGGCTGGAGGAATAGCTCAGTCTTCACCAAGTTCTGGAATTTTCTTCCAAGGGGATGGGCAGTCTCAGCTTGTAGTTAACTCACACTTGAGCTCATCTTTCGGGAACTCTTCTAATTCCATTCCCGGAACTGGGCGTTCAAATCTCGGTCCGGTTTCTGGGGACATGAATAATGCAGTTTTGAGCGGTGTGGCGAACTCAGGTCTAAGTGTTGGGGCAAGTTCTTTGGTCACAGATGCAAACTCTGTACTTTCTGGAGGTCCCCATTTGCAAAGAAGTGCAAGCATCAATAACGAGTCATACATGCGCTTACCAGCATCACCCATGTCCTTCTCTTCCAACAATATTAGCATGTCAGGGTCATCGATTGTGGATGGGTCTTCCGTAGTGCAACAAAATTCTCATCATGACCAGAATTCTCAACAAATTCAGCAGAATCAGCAACACCAGAACCAACGGCAGCAAGGGCCTTCTAGTGCTACTTCCTTACCAACATCCCAAACTGGTCAGGTTTCCCTTCCCATGGGAGCGCGAGTACCTGGAACCTTTATTCAGGATCCAAACAATTTGGCCCATGTCGAGAAAAAACCCCGTCTGGATATCAAGCAGGAAGATATTCTACCGCAACAGGTGATACAACAGTTACTGCAAAGACAGGATCCAATGCAACTCCAAGGTCGAAATCCCCAGTTACAAACCATGCTTCAGCAACAGAGATTACGGCAACAGCAACAGCAACAGATTTTGCAGTCAATGCCTCAACTCCAGAGGGCCCAGTTGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAGTTGAGACAACAGCAATTTCAACAACAAGCAATGCAGCCAGTATCTTCCATTAAGCGCCCCTATGATGGTGGCGTATGTGCTCGTAGGCTGATGCAATATTTATACCACCAGCGGCAACGACCTGCTGACAATAGTATTGCTTATTGGAGGAAGTTTGTTACAGAGTATTACTCTCCTCGTGCGAAGAAAAGATGGTGCCTGTCATTATATGATAATGTTGGGCATCACGCACTCGGTGTTTTCCCTCAGGCTGCTATGGACGCGTGGCAATGTGACATTTGTGGTTCTAAATCTGGAAGGGGTTTTGAGGCGACATTTGAAGTGCTTCCTAGACTTAATGAAATCAAATTTGGCAGTGGAGTCATCGATGAGCTTTTGTTCTTGGACTTGCCACGTGAATGTAGATTTCCTTCTGGTGTCATGATGTTGGAGTATGGGAAAGCAGTTCAAGAGAGTGTATATGAGCAACTTCGTGTTGTTCGGGAGGGTCAGCTTCGTATCATATTTACGCAAGATTTAAAGATATTGTCTTGGGAATTCTGTGCAAGACGACATGAAGAACTTCTTCCTCGTAGGTTGGTTGCTCCGCAGGTGAATCAGTTGGTTCAAGTTGCTCAGAAATGTCAAAGCACAATAGCTGAAAGTGGATCCGACGGGATCTCTCAGCAGGATCTACAAACAAACAGCAATATGGTACTGACAGCTGGACGGCAGCTTGCAAAGAGTTTGGAGTTGCAGTCGTTAAATGACTTGGGTTTTTCCAAAAGATATGTGAGGTGTTTGCAGATCTCAGAAGTTGTCAATAGCATGAAGGACTTGGTTGACTTCTGCAGGGAGAACAAAGTTGGGCCAATTGAGGGCTTGAAGGTTTATCCTCGGCATGCTACCGCGGCCAAGCTCCAGATGCAAAAGATGCAGGAAATGGAGCAGTTAGCAAGTGCTCAGGGTTTGCCCACCGACAGGAACACACTCAATAAGCTAATGGCATTGCATCCTGGACTGAATAACCAAATGAATAACCACCAGATGGCTGGTGGGCGTGGAGCTATGAGCGGTTCAGCACAAGCTGCTCTGGCACTAACTAATTACCAGAATCTGCTCTTGAGGCAGAACTCAATGAATTCAAATGCGAACTCTCTTCAACAGGAGGCATCTTCTTCCTTCAATAATTCCAATCATAGCCCATCTTCAACATTCCAAGGAGGTGCCGCTGCTTTAATACCAGGATCCATGCAGAGCTTACCTGGTAGTGCCTTGTCAAGTCCCCATCTACCCTCGCGACAGCCGCAGCAGCTGCAGCAGCGGTCACTTAGTTCCAATAGCTTGCTACAACAAAATCATTCAACCGGCTCCCAAGGCAACCAGGCCTTGCAGCAACAGATGATCCAGCAACTGCTACAGGAGATGTCCAATAACAGCGGGGGAGGACAACAATCTCTTCCCAGTCCAAGCGCAAATGGGAGTGTGGGAAGGAATGGATTGAGTTTTGGAGGCAACAATCCAGCTGCAGCTCCATCCACCTCCAATATGTCTGGTAGTCACGGCCCTGCTCCAAGCAGGAGTAACAGCTTCAAAGCCACTGCAAACAGTGACTCTTCCGCAGGAGGTGGTGGCGGCGGTGGTAACAATGCCTACAACCAGCGAGCCCCGGATTTACCCTCAAACCTTCACCTGCAGGAGGATCTGGTACAAGACATTGCCCGTGAATTCACAGAAAATGGTTTCTTTAACAGCGATCTTGACGATACCATGTATGGCTGGAAGGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001666 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009909 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010044 GO:0010154 GO:0010243 GO:0010272 GO:0014070 GO:0022414 GO:0032501 GO:0032502 GO:0033554 GO:0035670 GO:0036293 GO:0042221 GO:0042493 GO:0043207 GO:0046677 GO:0046898 GO:0046982 GO:0046983 GO:0047484 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048519 GO:0048580 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060090 GO:0060992 GO:0061458 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0080134 GO:0090567 GO:0097159 GO:0097305 GO:0099402 GO:1901000 GO:1901001 GO:1901363 GO:1901654 GO:1901698 GO:1901700 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LIM_bind

Protein Analysis

867

Amino Acids

94.53

Weight (kDa)

9.09

Isoelectric Point (pI)

65.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LIM_bind	PF01803	306 - 566	1.1e-65	LIM-domain binding protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004096)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62090 AT5G62090 AT5G62090
fragaria_vesca	FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060
malus_domestica	MD01G1197300.v1.1 MD07G1264600.v1.1
prunus_persica	Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1
pyrus_communis	pycom01g20770 pycom07g24320
rosa_chinensis	RchiOBHm_Chr1g0376781
rosa_laevigata	RLG00000026560 RLG00000026570 RLG00000026571
rosa_multiflora	Rmu_sc0002113.1_g000009
rosa_roxburghii	Rroxscaffold_4G00281740
rosa_rugosa	Rorug01G0398100 Rorug01G0398200.1 Rorug01G0398300 Rorug01G0398300
rosa_samantha	Rh1AG415500 Rh1BG375000 Rh1CG388800 Rh1DG405600
rosa_wichuraiana	Rw1G036450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1411, 2511
Acc36I	ACCTGC	3 cut(s)	961, 1411, 2511
AccB1I	GGYRCC	3 cut(s)	4, 1026, 2036
AccB7I	CCANNNNNTGG	2 cut(s)	50, 1858
AccBSI	CCGCTC	2 cut(s)	201, 1884
AccII	CGCG	4 cut(s)	547, 1094, 1721, 2110
AcoI	YGGCCR	1 cut(s)	1722
AcsI	RAATTY	8 cut(s)	54, 412, 430, 441, 1178, 1367, 1951, 2537
AcuI	CTGAAG	1 cut(s)	704
AcvI	CACGTG	1 cut(s)	1226
AdeI	CACNNNGTG	1 cut(s)	1067
AfaI	GTAC	4 cut(s)	264, 552, 1527, 2520
AflIII	ACRYGT	1 cut(s)	1092
AjnI	CCWGG	5 cut(s)	553, 1825, 2053, 2074, 2193
AjuI	GAANNNNNNNTTGG	2 cut(s)	1164, 1196
Alw21I	GWGCWC	3 cut(s)	110, 913, 1774
Alw26I	GTCTC	2 cut(s)	84, 829
AlwNI	CAGNNNCTG	4 cut(s)	661, 1927, 2125, 2224
Ama87I	CYCGRG	1 cut(s)	12
AoxI	GGCC	7 cut(s)	482, 585, 786, 1679, 1722, 2196, 2374
ApaI	GGGCCC	1 cut(s)	790
ApoI	RAATTY	8 cut(s)	54, 412, 430, 441, 1178, 1367, 1951, 2537
Asp700I	GAANNNNTTC	4 cut(s)	630, 1155, 1392, 1395
AspLEI	GCGC	4 cut(s)	324, 547, 888, 2285
AspS9I	GGNCC	8 cut(s)	164, 275, 482, 586, 786, 787, 1679, 2375
AsuC2I	CCSGG	2 cut(s)	141, 2480
AsuHPI	GGTGA	5 cut(s)	33, 327, 658, 1435, 2492
AvaI	CYCGRG	1 cut(s)	12
AvaII	GGWCC	2 cut(s)	164, 275
AxyI	CCTNAGG	1 cut(s)	1077
BaeGI	GKGCMC	1 cut(s)	790
BaeI	ACNNNNGTAYC	2 cut(s)	641, 674
BamHI	GGATCC	4 cut(s)	571, 673, 1478, 2057
BanI	GGYRCC	3 cut(s)	4, 1026, 2036
BanII	GRGCYC	3 cut(s)	110, 790, 2479
BarI	GAAGNNNNNNTAC	4 cut(s)	618, 650, 1225, 1257
BauI	CACGAG	1 cut(s)	1008
BbrPI	CACGTG	1 cut(s)	1226
BbsI	GAAGAC	2 cut(s)	30, 387
Bbv12I	GWGCWC	3 cut(s)	110, 913, 1774
BccI	CCATC	8 cut(s)	65, 383, 890, 1017, 1852, 2023, 2106, 2353
BceAI	ACGGC	4 cut(s)	488, 752, 1556, 2389
BciT130I	CCWGG	5 cut(s)	555, 1827, 2055, 2076, 2195
BcnI	CCSGG	2 cut(s)	141, 2480
BcoDI	GTCTC	2 cut(s)	84, 829
BfaI	CTAG	2 cut(s)	489, 1161
BfmI	CTRYAG	5 cut(s)	1660, 2126, 2228, 2337, 2504
BfoI	RGCGCY	1 cut(s)	889
BfuAI	ACCTGC	3 cut(s)	961, 1411, 2511
BglII	AGATCT	1 cut(s)	1617
Bme1390I	CCNGG	7 cut(s)	141, 555, 1827, 2055, 2076, 2195, 2480
Bme18I	GGWCC	2 cut(s)	164, 275
BmeT110I	CYCGRG	1 cut(s)	12
BmgT120I	GGNCC	8 cut(s)	164, 275, 482, 586, 786, 787, 1679, 2375
BmrFI	CCNGG	7 cut(s)	141, 555, 1827, 2055, 2076, 2195, 2480
BmrI	ACTGGG	4 cut(s)	156, 697, 784, 2268
BmsI	GCATC	9 cut(s)	241, 309, 341, 912, 1063, 1725, 1734, 1831, 1991
BmuI	ACTGGG	4 cut(s)	156, 697, 784, 2268
BpiI	GAAGAC	2 cut(s)	30, 387
BplI	GAGNNNNNCTC	2 cut(s)	986, 1018
BpmI	CTGGAG	4 cut(s)	42, 291, 764, 1715
Bpu10I	CCTNAGC	1 cut(s)	1773
BpuEI	CTTGAG	2 cut(s)	124, 1954
BpuMI	CCSGG	2 cut(s)	141, 2480
Bsa29I	ATCGAT	2 cut(s)	380, 1197
BsaAI	YACGTR	1 cut(s)	1226
BsaJI	CCNNGG	8 cut(s)	64, 537, 688, 1706, 1719, 2029, 2185, 2478
BsaWI	WCCGGW	1 cut(s)	166
BsaXI	ACNNNNNCTCC	4 cut(s)	534, 564, 1553, 1583
Bse118I	RCCGGY	1 cut(s)	2177
Bse1I	ACTGG	6 cut(s)	151, 523, 703, 790, 869, 2274
Bse21I	CCTNAGG	1 cut(s)	1077
Bse3DI	GCAATG	4 cut(s)	867, 1106, 1817, 2526
BseBI	CCWGG	5 cut(s)	555, 1827, 2055, 2076, 2195
BseCI	ATCGAT	2 cut(s)	380, 1197
BseDI	CCNNGG	8 cut(s)	64, 537, 688, 1706, 1719, 2029, 2185, 2478
BseGI	GGATG	5 cut(s)	76, 394, 509, 1822, 2345
BseMI	GCAATG	4 cut(s)	867, 1106, 1817, 2526
BseMII	CTCAG	8 cut(s)	47, 95, 228, 1091, 1460, 1508, 1635, 1787
BseNI	ACTGG	6 cut(s)	151, 523, 703, 790, 869, 2274
BseRI	GAGGAG	1 cut(s)	996
BseSI	GKGCMC	1 cut(s)	790
Bsh1236I	CGCG	4 cut(s)	547, 1094, 1721, 2110
BshFI	GGCC	7 cut(s)	484, 587, 788, 1681, 1724, 2198, 2376
BshNI	GGYRCC	3 cut(s)	4, 1026, 2036
BshVI	ATCGAT	2 cut(s)	380, 1197
BsiHKAI	GWGCWC	3 cut(s)	110, 913, 1774
BsiHKCI	CYCGRG	1 cut(s)	12
BsiSI	CCGG	4 cut(s)	141, 167, 2178, 2480
BslFI	GGGAC	3 cut(s)	191, 261, 2079
BsmAI	GTCTC	2 cut(s)	84, 829
BsmFI	GGGAC	3 cut(s)	191, 261, 2079
BsnI	GGCC	7 cut(s)	484, 587, 788, 1681, 1724, 2198, 2376
BsoBI	CYCGRG	1 cut(s)	12
Bsp120I	GGGCCC	1 cut(s)	786
Bsp1286I	GDGCHC	5 cut(s)	110, 790, 913, 1774, 2479
Bsp19I	CCATGG	1 cut(s)	537
Bsp68I	TCGCGA	1 cut(s)	2110
BspANI	GGCC	7 cut(s)	484, 587, 788, 1681, 1724, 2198, 2376
BspCNI	CTCAG	8 cut(s)	46, 94, 227, 1090, 1459, 1507, 1634, 1786
BspDI	ATCGAT	2 cut(s)	380, 1197
BspFNI	CGCG	4 cut(s)	547, 1094, 1721, 2110
BspHI	TCATGA	2 cut(s)	421, 1251
BspMAI	CTGCAG	4 cut(s)	1664, 2130, 2341, 2508
BspMI	ACCTGC	3 cut(s)	961, 1411, 2511
BspT107I	GGYRCC	3 cut(s)	4, 1026, 2036
BsrBI	CCGCTC	2 cut(s)	201, 1884
BsrDI	GCAATG	4 cut(s)	867, 1106, 1817, 2526
BsrFI	RCCGGY	1 cut(s)	2177
BsrI	ACTGG	6 cut(s)	151, 523, 703, 790, 869, 2274
BssAI	RCCGGY	1 cut(s)	2177
BssECI	CCNNGG	8 cut(s)	64, 537, 688, 1706, 1719, 2029, 2185, 2478
BssSI	CACGAG	1 cut(s)	1008
BssT1I	CCWWGG	5 cut(s)	64, 537, 688, 2029, 2185
Bst2BI	CACGAG	1 cut(s)	1008
Bst2UI	CCWGG	5 cut(s)	555, 1827, 2055, 2076, 2195
Bst4CI	ACNGT	3 cut(s)	657, 831, 2420
Bst6I	CTCTTC	5 cut(s)	130, 355, 1974, 2274, 2431
BstAPI	GCANNNNNTGC	4 cut(s)	769, 1744, 1898, 2125
BstBAI	YACGTR	1 cut(s)	1226
BstC8I	GCNNGC	5 cut(s)	298, 1548, 1713, 2156, 2475
BstDSI	CCRYGG	2 cut(s)	537, 1719
BstENI	CCTNNNNNAGG	1 cut(s)	2507
BstF5I	GGATG	5 cut(s)	76, 394, 509, 1822, 2345
BstFNI	CGCG	4 cut(s)	547, 1094, 1721, 2110
BstH2I	RGCGCY	1 cut(s)	889
BstHHI	GCGC	4 cut(s)	324, 547, 888, 2285
BstMAI	GTCTC	2 cut(s)	84, 829
BstNI	CCWGG	5 cut(s)	555, 1827, 2055, 2076, 2195
BstNSI	RCATGY	3 cut(s)	322, 370, 1715
BstSCI	CCNGG	7 cut(s)	139, 553, 1825, 2053, 2074, 2193, 2478
BstSFI	CTRYAG	5 cut(s)	1660, 2126, 2228, 2337, 2504
BstSLI	GKGCMC	1 cut(s)	790
BstUI	CGCG	4 cut(s)	547, 1094, 1721, 2110
BstV2I	GAAGAC	2 cut(s)	30, 387
BstX2I	RGATCY	8 cut(s)	571, 673, 1478, 1488, 1501, 1617, 2057, 2512
BstXI	CCANNNNNNTGG	2 cut(s)	71, 1862
BstYI	RGATCY	8 cut(s)	571, 673, 1478, 1488, 1501, 1617, 2057, 2512
Bsu15I	ATCGAT	2 cut(s)	380, 1197
Bsu36I	CCTNAGG	1 cut(s)	1077
BsuRI	GGCC	7 cut(s)	484, 587, 788, 1681, 1724, 2198, 2376
BsuTUI	ATCGAT	2 cut(s)	380, 1197
BtgI	CCRYGG	2 cut(s)	537, 1719
BtsCI	GGATG	5 cut(s)	76, 394, 509, 1822, 2345
BtsI	GCAGTG	2 cut(s)	1192, 2409
BtsIMutI	CAGTG	3 cut(s)	1192, 2409, 2425
BtuMI	TCGCGA	1 cut(s)	2110
BveI	ACCTGC	3 cut(s)	961, 1411, 2511
Cac8I	GCNNGC	5 cut(s)	298, 1548, 1713, 2156, 2475
CaiI	CAGNNNCTG	4 cut(s)	661, 1927, 2125, 2224
CciI	TCATGA	2 cut(s)	421, 1251
CfoI	GCGC	4 cut(s)	324, 547, 888, 2285
Cfr10I	RCCGGY	1 cut(s)	2177
Cfr13I	GGNCC	8 cut(s)	164, 275, 482, 586, 786, 787, 1679, 2375
Cfr42I	CCGCGG	1 cut(s)	1722
ClaI	ATCGAT	2 cut(s)	380, 1197
CpoI	CGGWCCG	1 cut(s)	164
CseI	GACGC	1 cut(s)	1100
CsiI	ACCWGGT	1 cut(s)	2074
Csp6I	GTAC	4 cut(s)	263, 551, 1526, 2519
CspI	CGGWCCG	1 cut(s)	164
CviQI	GTAC	4 cut(s)	263, 551, 1526, 2519
DraI	TTTAAA	1 cut(s)	1350
DraIII	CACNNNGTG	1 cut(s)	1067
EaeI	YGGCCR	1 cut(s)	1722
Eam1104I	CTCTTC	5 cut(s)	130, 355, 1974, 2274, 2431
EarI	CTCTTC	5 cut(s)	130, 355, 1974, 2274, 2431
Ecl136II	GAGCTC	1 cut(s)	108
Eco130I	CCWWGG	5 cut(s)	64, 537, 688, 2029, 2185
Eco147I	AGGCCT	1 cut(s)	2198
Eco24I	GRGCYC	3 cut(s)	110, 790, 2479
Eco32I	GATATC	1 cut(s)	616
Eco47I	GGWCC	2 cut(s)	164, 275
Eco53kI	GAGCTC	1 cut(s)	108
Eco57I	CTGAAG	1 cut(s)	704
Eco72I	CACGTG	1 cut(s)	1226
Eco81I	CCTNAGG	1 cut(s)	1077
Eco88I	CYCGRG	1 cut(s)	12
EcoICRI	GAGCTC	1 cut(s)	108
EcoNI	CCTNNNNNAGG	1 cut(s)	2507
EcoO109I	RGGNCCY	3 cut(s)	275, 482, 786
EcoRI	GAATTC	4 cut(s)	430, 1367, 1951, 2537
EcoRII	CCWGG	5 cut(s)	553, 1825, 2053, 2074, 2193
EcoRV	GATATC	1 cut(s)	616
EcoT14I	CCWWGG	5 cut(s)	64, 537, 688, 2029, 2185
EcoT38I	GRGCYC	3 cut(s)	110, 790, 2479
ErhI	CCWWGG	5 cut(s)	64, 537, 688, 2029, 2185
FalI	AAGNNNNNCTT	2 cut(s)	1380, 1412
FaqI	GGGAC	3 cut(s)	191, 261, 2079
FauI	CCCGC	1 cut(s)	2243
FokI	GGATG	5 cut(s)	83, 401, 496, 1809, 2332
FriOI	GRGCYC	3 cut(s)	110, 790, 2479
FspBI	CTAG	2 cut(s)	489, 1161
GlaI	GCGC	4 cut(s)	323, 546, 887, 2284
GsuI	CTGGAG	4 cut(s)	42, 291, 764, 1715
HaeII	RGCGCY	1 cut(s)	889
HaeIII	GGCC	7 cut(s)	484, 587, 788, 1681, 1724, 2198, 2376
HapII	CCGG	4 cut(s)	141, 167, 2178, 2480
HgaI	GACGC	1 cut(s)	1100
HhaI	GCGC	4 cut(s)	324, 547, 888, 2285
Hin6I	GCGC	4 cut(s)	322, 545, 886, 2283
HinP1I	GCGC	4 cut(s)	322, 545, 886, 2283
HincII	GTYRAC	2 cut(s)	94, 1654
HindII	GTYRAC	2 cut(s)	94, 1654
HinfI	GANTC	6 cut(s)	311, 451, 1191, 1426, 1924, 2423
HpaI	GTTAAC	1 cut(s)	94
HpaII	CCGG	4 cut(s)	141, 167, 2178, 2480
HphI	GGTGA	5 cut(s)	33, 327, 658, 1435, 2492
Hpy166II	GTNNAC	2 cut(s)	94, 1654
Hpy188I	TCNGA	3 cut(s)	1449, 1483, 1624
Hpy8I	GTNNAC	2 cut(s)	94, 1654
Hpy99I	CGWCG	1 cut(s)	1487
HpyCH4III	ACNGT	3 cut(s)	657, 831, 2420
HpyCH4IV	ACGT	1 cut(s)	1225
HpySE526I	ACGT	1 cut(s)	1225
HspAI	GCGC	4 cut(s)	322, 545, 886, 2283
KspAI	GTTAAC	1 cut(s)	94
KspI	CCGCGG	1 cut(s)	1722
LmnI	GCTCC	8 cut(s)	542, 1420, 1734, 1756, 1874, 2186, 2347, 2386
LweI	GCATC	9 cut(s)	241, 309, 341, 912, 1063, 1725, 1734, 1831, 1991
MabI	ACCWGGT	1 cut(s)	2074
MaeI	CTAG	2 cut(s)	489, 1161
MaeII	ACGT	1 cut(s)	1225
MbiI	CCGCTC	2 cut(s)	201, 1884
MfeI	CAATTG	1 cut(s)	1683
MflI	RGATCY	8 cut(s)	571, 673, 1478, 1488, 1501, 1617, 2057, 2512
MhlI	GDGCHC	5 cut(s)	110, 790, 913, 1774, 2479
MluI	ACGCGT	1 cut(s)	1092
MlyI	GAGTC	3 cut(s)	320, 1200, 2417
MmeI	TCCRAC	3 cut(s)	378, 1239, 1506
MroXI	GAANNNNTTC	4 cut(s)	630, 1155, 1392, 1395
MseI	TTAA	7 cut(s)	93, 882, 1167, 1349, 1574, 2048, 2559
MslI	CAYNNNNRTG	1 cut(s)	1228
MspA1I	CMGCKG	8 cut(s)	943, 1535, 1721, 2042, 2125, 2134, 2250, 2336
MspI	CCGG	4 cut(s)	141, 167, 2178, 2480
MspR9I	CCNGG	7 cut(s)	141, 555, 1827, 2055, 2076, 2195, 2480
MunI	CAATTG	1 cut(s)	1683
MvaI	CCWGG	5 cut(s)	555, 1827, 2055, 2076, 2195
MvnI	CGCG	4 cut(s)	547, 1094, 1721, 2110
NciI	CCSGG	2 cut(s)	141, 2480
NcoI	CCATGG	1 cut(s)	537
NmeAIII	GCCGAG	1 cut(s)	1687
NmuCI	GTSAC	5 cut(s)	244, 1103, 2136, 2369, 2420
NruI	TCGCGA	1 cut(s)	2110
NspI	RCATGY	3 cut(s)	322, 370, 1715
PaeI	GCATGC	1 cut(s)	1715
PagI	TCATGA	2 cut(s)	421, 1251
PaqCI	CACCTGC	2 cut(s)	1411, 2511
PceI	AGGCCT	1 cut(s)	2198
PdmI	GAANNNNTTC	4 cut(s)	630, 1155, 1392, 1395
PfeI	GAWTC	3 cut(s)	451, 1426, 1924
PflMI	CCANNNNNTGG	2 cut(s)	50, 1858
PfoI	TCCNGGA	2 cut(s)	139, 1825
PleI	GAGTC	3 cut(s)	319, 1199, 2417
PmaCI	CACGTG	1 cut(s)	1226
PmlI	CACGTG	1 cut(s)	1226
PpsI	GAGTC	3 cut(s)	319, 1199, 2417
Ppu21I	YACGTR	1 cut(s)	1226
PpuMI	RGGWCCY	1 cut(s)	275
Psp124BI	GAGCTC	1 cut(s)	110
Psp5II	RGGWCCY	1 cut(s)	275
Psp6I	CCWGG	5 cut(s)	553, 1825, 2053, 2074, 2193
PspCI	CACGTG	1 cut(s)	1226
PspGI	CCWGG	5 cut(s)	553, 1825, 2053, 2074, 2193
PspOMI	GGGCCC	1 cut(s)	786
PspPI	GGNCC	8 cut(s)	164, 275, 482, 586, 786, 787, 1679, 2375
PspPPI	RGGWCCY	1 cut(s)	275
PstI	CTGCAG	4 cut(s)	1664, 2130, 2341, 2508
PstNI	CAGNNNCTG	4 cut(s)	661, 1927, 2125, 2224
PsuI	RGATCY	8 cut(s)	571, 673, 1478, 1488, 1501, 1617, 2057, 2512
PvuII	CAGCTG	3 cut(s)	1535, 2125, 2336
RruI	TCGCGA	1 cut(s)	2110
RsaI	GTAC	4 cut(s)	264, 552, 1527, 2520
RsaNI	GTAC	4 cut(s)	263, 551, 1526, 2519
RseI	CAYNNNNRTG	1 cut(s)	1228
Rsr2I	CGGWCCG	1 cut(s)	164
RsrII	CGGWCCG	1 cut(s)	164
SacI	GAGCTC	1 cut(s)	110
SacII	CCGCGG	1 cut(s)	1722
SaqAI	TTAA	7 cut(s)	93, 882, 1167, 1349, 1574, 2048, 2559
Sau96I	GGNCC	8 cut(s)	164, 275, 482, 586, 786, 787, 1679, 2375
SbfI	CCTGCAGG	1 cut(s)	2508
SchI	GAGTC	3 cut(s)	320, 1200, 2417
ScrFI	CCNGG	7 cut(s)	141, 555, 1827, 2055, 2076, 2195, 2480
SdaI	CCTGCAGG	1 cut(s)	2508
SduI	GDGCHC	5 cut(s)	110, 790, 913, 1774, 2479
SexAI	ACCWGGT	1 cut(s)	2074
SfaNI	GCATC	9 cut(s)	241, 309, 341, 912, 1063, 1725, 1734, 1831, 1991
SfcI	CTRYAG	5 cut(s)	1660, 2126, 2228, 2337, 2504
Sfr303I	CCGCGG	1 cut(s)	1722
SgrBI	CCGCGG	1 cut(s)	1722
SinI	GGWCC	2 cut(s)	164, 275
SmiMI	CAYNNNNRTG	1 cut(s)	1228
SmlI	CTYRAG	2 cut(s)	103, 1933
SmoI	CTYRAG	2 cut(s)	103, 1933
SphI	GCATGC	1 cut(s)	1715
Sse8387I	CCTGCAGG	1 cut(s)	2508
SseBI	AGGCCT	1 cut(s)	2198
SspI	AATATT	2 cut(s)	361, 929
SspMI	CTAG	2 cut(s)	489, 1161
SstI	GAGCTC	1 cut(s)	110
StuI	AGGCCT	1 cut(s)	2198
StyD4I	CCNGG	7 cut(s)	139, 553, 1825, 2053, 2074, 2193, 2478
StyI	CCWWGG	5 cut(s)	64, 537, 688, 2029, 2185
TaaI	ACNGT	3 cut(s)	657, 831, 2420
TaiI	ACGT	1 cut(s)	1228
TaqI	TCGA	4 cut(s)	380, 594, 694, 1197
TaqII	GACCGA	1 cut(s)	152
TatI	WGTACW	1 cut(s)	262
TauI	GCSGC	5 cut(s)	946, 1724, 2042, 2119, 2448
TfiI	GAWTC	3 cut(s)	451, 1426, 1924
Tru1I	TTAA	7 cut(s)	93, 882, 1167, 1349, 1574, 2048, 2559
Tru9I	TTAA	7 cut(s)	93, 882, 1167, 1349, 1574, 2048, 2559
TscAI	CASTG	3 cut(s)	1192, 2416, 2425
TseFI	GTSAC	5 cut(s)	244, 1103, 2136, 2369, 2420
Tsp45I	GTSAC	5 cut(s)	244, 1103, 2136, 2369, 2420
TspDTI	ATGAA	6 cut(s)	197, 1185, 1401, 1655, 1859, 1964
TspGWI	ACGGA	1 cut(s)	388
TspRI	CASTG	3 cut(s)	1192, 2416, 2425
Van91I	CCANNNNNTGG	2 cut(s)	50, 1858
VpaK11BI	GGWCC	2 cut(s)	164, 275
XagI	CCTNNNNNAGG	1 cut(s)	2507
XapI	RAATTY	8 cut(s)	54, 412, 430, 441, 1178, 1367, 1951, 2537
XceI	RCATGY	3 cut(s)	322, 370, 1715
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1859, 1862
XmnI	GAANNNNTTC	4 cut(s)	630, 1155, 1392, 1395
XspI	CTAG	2 cut(s)	489, 1161

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.