Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0004096

Physical Location & Seq

Genomic Coordinates Reverse (-)

33335128 .. 33340927

Gene Structure 5800 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1264600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2580 bp

ATGGTGCCTTCTCGTGTGGCTGGAGGATTAGCTCAGTCTTCACCAAGTTCTGGAATTTTCTTCCAAGGGGATGGGCAGTCTCAGCTTGCAGTTAACTCACACTTGAGCTCATCTTTTGGGAACTCTTCTAATTCCTTTCTTGGAACTGGGCGTTCAAATCTCAGACCGGTTTCTGGGGACATGAATAATGCAGTTTTGAGTGGTGTGGCGAACTCAGGTCCGAGTGTTGGCGCAAGTTCTTTGGTCACAGATGCAAACTCTGTATTTTCTGGAGGTCCCCATTTGCAAAGAAGTGCAAGCATCAATAACGAGTCATACATGCGCTTACCAGCATCGCCCATGTCATTCTCTTCCAACAATATTAGCATGTCAGGGTCATCAATTATGGATGGGTCTTCTGTAGTGCAACAGAATTCTCAGCATGACCAGAATTCTCAACAAATGCAGCAGAATCAGCAGCACCAAAACCAACGGCAGCAAGGGGCTTCAAGTGCTACTTCTTTACCAACGTCCCAAACTGGCCAGGTTTCCCTTCCCATGGGAGCGCGAGTACCTGGAACTTTTATTCAGGATCCAAACAATTTGTCCCATGTCCAGAAAAAACCCCGTCTGGATATCAAGCAGGAAGATATTCTGCAGCAGCAAGTGATACAACAGTTACTGCAAAGACAGGATCCAATGCAATTCCAAGGCCGGAATCCCCAGTTACAAGCCATACTTCACCAGCAGAGATTACGGCAACAGCAACAGCAACAGATTTTGCAGTCAATGCCTCAACTGCAGAGAGCCCAGTTGCAGCAGCAGCAACAGCAACAACAGCAACAACAACAGCAGCAGTTGAGACAACAGCAATTTCAACAACCAATGCAGCCAGTATCTTCCATTAAGCGTCCCTATGATGGTGGTGTATGTGCTCGTAGGCTGATGCAATATTTATATCATCAGCGGCAACGGCCTGCTGACAATAGTATTGCTTATTGGAGGAAGTTTGTTACAGAGTATTACTCTCCTCGTGCTAAGAAAAGATGGTGCTTGTCATTATATGATAATGTTGGCCATCACGCACTTGGTGTTTTCCCTCAGGCTGCTATGGACGCGTGGCAATGCGACATTTGTGGTTCTAAATCTGGAAGGGGTTTTGAGGCAACATTTGAAGTGCTTCCTAGACTTAATGAAATCAAATTTGGCAGTGGAGTCATCGATGAGCTTTTATTCTTGGACTTGCCACGTGAAGGTAGATTTCCTTCTGGTGTGATGATGTTGGAGTATGGGAAAGCAGTTCAAGAGAGTGTATATGAGCAACTTCGTGTTGTTCGGGAGGGTCAGCTTCGTATCATATTTACGCAAGATTTAAAGATATTGTCTTGGGAATTCTGTGCAAGACGACATGAAGAACTTCTTCCTCGTAGGTTGGTTGCTCCACAGGTGAATCAGTTGGTTCAAGTTGCTCAGAAATGCCAAAGCACAATAGCTGAAAGTGGATCTGATGGGATTTCTCAGCAGGATCTCCAAACAAACAGCAATATGGTGCTGACAGCTGGACGGCAGCTCGCAAAGAGTTTGGAGTTGCAGTCGTTGAATGACTTAGGTTTTTCTAAGAGATATGTGAGGTGTTTGCAGATCTCAGAGGTTGTCAATAGCATGAAGGACTTGGTTGACTTCTGCAGGGAGAACAAAGTTGGGCCAATTGAGGGCTTGAAGGTTTATCCTCGGCATGCCACCGCAGCCAAGCTCCAGATGCAAAAGATGCAGGAAATGGAGCAGTTAGCAAGTGCTCAGGGTTTGCCCACTGACAGGAACACACTCAATAAGCTAATGGCATTGCATCCTGGACTGAATAACCAAATGAACAACCACCATCAGATGGTCAGTCGTGGAGCTATGAGTGGTTCAGCGCAAGCCGCTTACCAGAATCTGCTTTTGAGACAGAACTCTATGAATTCAAATGCAAACTCTCTTCAACAGGAGGCATCTTCTTCCTTCAATAATTCCAACCACAGCCCATCATCAACATTCCAAGGTGCCGCCGCATTGATACCGGGATCCATGCAGAACTTACCTGGTAGTGCCTTGTCAAGTCCCCATCTACCCTCACGACAGCCACAGCAGCTGCAGCAGCGGTCACTTAGTTCCAATAGCTTGCTACAACAAACTCATTCAACTGGCTCCCAGGGTAACCAGGCCTTGCAGCAACAGATGATCCAGCAACTGCTACAGGAGATGTCCAATAACAGCGGGGGAGGAGGACAACAATCTCTTCCCAGTCCAAGTGCAAATGGGAGTGTTGGGAGGAATGGAGTGAGTTTTGGAGGCAACAATCCAGCGGCAGCACCATCCACCTCCAATGTGTCTGGTAGTCACGGCCCTGCTCCAAGCAGGAATAACAGCTTCAAAGCCACTGCAAACAGCGACAATTCCACAGGTGGTGGTGGTAACAACACATACAACCAAAGAGCCCCGGATTTACCCTCAAACCTTCACTTGCAAGAGGATCTGGTACAAGACATTGCCCGTGAATTCACAGAGAACGGCTTTTTTAACAGCAGTCTTGATGATAACATGTATGGCTGGAAGGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001666 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009909 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010044 GO:0010154 GO:0010243 GO:0010272 GO:0014070 GO:0022414 GO:0032501 GO:0032502 GO:0033554 GO:0035670 GO:0036293 GO:0042221 GO:0042493 GO:0043207 GO:0046677 GO:0046898 GO:0046982 GO:0046983 GO:0047484 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048519 GO:0048580 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060090 GO:0060992 GO:0061458 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0080134 GO:0090567 GO:0097159 GO:0097305 GO:0099402 GO:1901000 GO:1901001 GO:1901363 GO:1901654 GO:1901698 GO:1901700 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LIM_bind

Protein Analysis

860

Amino Acids

94.36

Weight (kDa)

9.33

Isoelectric Point (pI)

63.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LIM_bind	PF01803	307 - 567	2.7e-65	LIM-domain binding protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004096)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62090 AT5G62090 AT5G62090
fragaria_vesca	FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060
malus_domestica	MD01G1197300.v1.1 MD07G1264600.v1.1
prunus_persica	Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1
pyrus_communis	pycom01g20770 pycom07g24320
rosa_chinensis	RchiOBHm_Chr1g0376781
rosa_laevigata	RLG00000026560 RLG00000026570 RLG00000026571
rosa_multiflora	Rmu_sc0002113.1_g000009
rosa_roxburghii	Rroxscaffold_4G00281740
rosa_rugosa	Rorug01G0398100 Rorug01G0398200.1 Rorug01G0398300 Rorug01G0398300
rosa_samantha	Rh1AG415500 Rh1BG375000 Rh1CG388800 Rh1DG405600
rosa_wichuraiana	Rw1G036450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	4, 2021
AccB7I	CCANNNNNTGG	2 cut(s)	50, 1864
AccII	CGCG	2 cut(s)	547, 1097
AciI	CCGC	8 cut(s)	946, 1722, 1902, 2025, 2028, 2119, 2235, 2324
AcoI	YGGCCR	2 cut(s)	520, 1054
AcsI	RAATTY	7 cut(s)	54, 412, 430, 1181, 1370, 1939, 2516
AcvI	CACGTG	1 cut(s)	1229
AdeI	CACNNNGTG	1 cut(s)	1070
AfaI	GTAC	2 cut(s)	552, 2499
AfiI	CCNNNNNNNGG	9 cut(s)	50, 173, 227, 538, 899, 1232, 1691, 1794, 1864
AflIII	ACRYGT	2 cut(s)	1095, 2559
AgeI	ACCGGT	1 cut(s)	166
AjnI	CCWGG	6 cut(s)	522, 553, 1828, 2059, 2169, 2178
AjuI	GAANNNNNNNTTGG	2 cut(s)	1167, 1199
Alw21I	GWGCWC	3 cut(s)	110, 916, 1777
Alw26I	GTCTC	3 cut(s)	84, 835, 1918
AlwNI	CAGNNNCTG	4 cut(s)	661, 1915, 2110, 2209
AoxI	GGCC	7 cut(s)	520, 691, 953, 1054, 1682, 2181, 2362
ApoI	RAATTY	7 cut(s)	54, 412, 430, 1181, 1370, 1939, 2516
ArsI	GACNNNNNNTTYG	2 cut(s)	569, 601
AsiGI	ACCGGT	1 cut(s)	166
Asp700I	GAANNNNTTC	4 cut(s)	630, 1158, 1395, 1398
AspLEI	GCGC	4 cut(s)	233, 324, 547, 1897
AspS9I	GGNCC	4 cut(s)	218, 275, 1682, 2363
AsuC2I	CCSGG	2 cut(s)	2040, 2459
AsuHPI	GGTGA	3 cut(s)	33, 713, 1438
AvaII	GGWCC	2 cut(s)	218, 275
AxyI	CCTNAGG	1 cut(s)	1080
BaeI	ACNNNNGTAYC	2 cut(s)	641, 674
BalI	TGGCCA	2 cut(s)	522, 1056
BamHI	GGATCC	3 cut(s)	571, 673, 2042
BanI	GGYRCC	2 cut(s)	4, 2021
BanII	GRGCYC	3 cut(s)	110, 790, 2458
BarI	GAAGNNNNNNTAC	2 cut(s)	1228, 1260
BauI	CACGAG	2 cut(s)	12, 1011
BbrPI	CACGTG	1 cut(s)	1229
BbsI	GAAGAC	2 cut(s)	30, 387
Bbv12I	GWGCWC	3 cut(s)	110, 916, 1777
BceAI	ACGGC	6 cut(s)	488, 752, 968, 1559, 2377, 2545
BciT130I	CCWGG	6 cut(s)	524, 555, 1830, 2061, 2171, 2180
BcnI	CCSGG	2 cut(s)	2040, 2459
BcoDI	GTCTC	3 cut(s)	84, 835, 1918
BfaI	CTAG	1 cut(s)	1164
BfmI	CTRYAG	6 cut(s)	399, 635, 779, 1663, 2111, 2213
BglII	AGATCT	1 cut(s)	1620
Bme1390I	CCNGG	8 cut(s)	524, 555, 1830, 2040, 2061, 2171, 2180, 2459
Bme18I	GGWCC	2 cut(s)	218, 275
BmgT120I	GGNCC	4 cut(s)	218, 275, 1682, 2363
BmiI	GGNNCC	7 cut(s)	6, 277, 573, 675, 2023, 2044, 2167
BmrFI	CCNGG	8 cut(s)	524, 555, 1830, 2040, 2061, 2171, 2180, 2459
BmrI	ACTGGG	4 cut(s)	156, 697, 784, 2256
BmsI	GCATC	8 cut(s)	241, 309, 341, 915, 1728, 1737, 1834, 1979
BmuI	ACTGGG	4 cut(s)	156, 697, 784, 2256
BpiI	GAAGAC	2 cut(s)	30, 387
BplI	GAGNNNNNCTC	2 cut(s)	989, 1021
BpmI	CTGGAG	3 cut(s)	42, 291, 1718
Bpu10I	CCTNAGC	1 cut(s)	1776
BpuEI	CTTGAG	1 cut(s)	124
BpuMI	CCSGG	2 cut(s)	2040, 2459
Bsa29I	ATCGAT	1 cut(s)	1200
BsaAI	YACGTR	1 cut(s)	1229
BsaJI	CCNNGG	8 cut(s)	64, 537, 688, 1709, 2017, 2169, 2170, 2457
BsaWI	WCCGGW	1 cut(s)	166
BsaXI	ACNNNNNCTCC	4 cut(s)	534, 564, 1556, 1586
Bsc4I	CCNNNNNNNGG	9 cut(s)	50, 173, 227, 538, 899, 1232, 1691, 1794, 1864
Bse118I	RCCGGY	1 cut(s)	166
Bse1I	ACTGG	7 cut(s)	151, 523, 703, 790, 872, 2167, 2262
Bse21I	CCTNAGG	1 cut(s)	1080
Bse3DI	GCAATG	3 cut(s)	1109, 1820, 2505
BseBI	CCWGG	6 cut(s)	524, 555, 1830, 2061, 2171, 2180
BseCI	ATCGAT	1 cut(s)	1200
BseDI	CCNNGG	8 cut(s)	64, 537, 688, 1709, 2017, 2169, 2170, 2457
BseGI	GGATG	4 cut(s)	76, 394, 1825, 2333
BseLI	CCNNNNNNNGG	9 cut(s)	50, 173, 227, 538, 899, 1232, 1691, 1794, 1864
BseMI	GCAATG	3 cut(s)	1109, 1820, 2505
BseNI	ACTGG	7 cut(s)	151, 523, 703, 790, 872, 2167, 2262
BseRI	GAGGAG	2 cut(s)	999, 2256
Bsh1236I	CGCG	2 cut(s)	547, 1097
BshFI	GGCC	7 cut(s)	522, 693, 955, 1056, 1684, 2183, 2364
BshNI	GGYRCC	2 cut(s)	4, 2021
BshTI	ACCGGT	1 cut(s)	166
BshVI	ATCGAT	1 cut(s)	1200
BsiHKAI	GWGCWC	3 cut(s)	110, 916, 1777
BsiSI	CCGG	4 cut(s)	167, 694, 2039, 2459
BslFI	GGGAC	6 cut(s)	191, 261, 496, 571, 876, 2064
BslI	CCNNNNNNNGG	9 cut(s)	50, 173, 227, 538, 899, 1232, 1691, 1794, 1864
BsmAI	GTCTC	3 cut(s)	84, 835, 1918
BsmFI	GGGAC	6 cut(s)	191, 261, 496, 571, 876, 2064
BsnI	GGCC	7 cut(s)	522, 693, 955, 1056, 1684, 2183, 2364
Bsp1286I	GDGCHC	5 cut(s)	110, 790, 916, 1777, 2458
Bsp143I	GATC	8 cut(s)	571, 673, 1481, 1504, 1620, 2042, 2199, 2491
Bsp19I	CCATGG	1 cut(s)	537
BspACI	CCGC	8 cut(s)	946, 1722, 1902, 2025, 2028, 2119, 2235, 2324
BspANI	GGCC	7 cut(s)	522, 693, 955, 1056, 1684, 2183, 2364
BspDI	ATCGAT	1 cut(s)	1200
BspFNI	CGCG	2 cut(s)	547, 1097
BspLI	GGNNCC	7 cut(s)	6, 277, 573, 675, 2023, 2044, 2167
BspMAI	CTGCAG	4 cut(s)	639, 783, 1667, 2115
BspT107I	GGYRCC	2 cut(s)	4, 2021
BsrDI	GCAATG	3 cut(s)	1109, 1820, 2505
BsrFI	RCCGGY	1 cut(s)	166
BsrI	ACTGG	7 cut(s)	151, 523, 703, 790, 872, 2167, 2262
BssAI	RCCGGY	1 cut(s)	166
BssECI	CCNNGG	8 cut(s)	64, 537, 688, 1709, 2017, 2169, 2170, 2457
BssMI	GATC	8 cut(s)	571, 673, 1481, 1504, 1620, 2042, 2199, 2491
BssSI	CACGAG	2 cut(s)	12, 1011
BssT1I	CCWWGG	4 cut(s)	64, 537, 688, 2017
Bst2BI	CACGAG	2 cut(s)	12, 1011
Bst2UI	CCWGG	6 cut(s)	524, 555, 1830, 2061, 2171, 2180
Bst4CI	ACNGT	1 cut(s)	657
Bst6I	CTCTTC	4 cut(s)	130, 355, 1962, 2262
BstAPI	GCANNNNNTGC	2 cut(s)	769, 1747
BstBAI	YACGTR	1 cut(s)	1229
BstC8I	GCNNGC	7 cut(s)	87, 298, 957, 1551, 1716, 1899, 2141
BstDSI	CCRYGG	1 cut(s)	537
BstEII	GGTNACC	1 cut(s)	2174
BstF5I	GGATG	4 cut(s)	76, 394, 1825, 2333
BstFNI	CGCG	2 cut(s)	547, 1097
BstHHI	GCGC	4 cut(s)	233, 324, 547, 1897
BstKTI	GATC	8 cut(s)	574, 676, 1484, 1507, 1623, 2045, 2202, 2494
BstMAI	GTCTC	3 cut(s)	84, 835, 1918
BstMBI	GATC	8 cut(s)	571, 673, 1481, 1504, 1620, 2042, 2199, 2491
BstNI	CCWGG	6 cut(s)	524, 555, 1830, 2061, 2171, 2180
BstNSI	RCATGY	4 cut(s)	322, 370, 1718, 2563
BstPI	GGTNACC	1 cut(s)	2174
BstSCI	CCNGG	8 cut(s)	522, 553, 1828, 2038, 2059, 2169, 2178, 2457
BstSFI	CTRYAG	6 cut(s)	399, 635, 779, 1663, 2111, 2213
BstUI	CGCG	2 cut(s)	547, 1097
BstV2I	GAAGAC	2 cut(s)	30, 387
BstX2I	RGATCY	7 cut(s)	571, 673, 1481, 1504, 1620, 2042, 2491
BstXI	CCANNNNNNTGG	1 cut(s)	71
BstYI	RGATCY	7 cut(s)	571, 673, 1481, 1504, 1620, 2042, 2491
Bsu15I	ATCGAT	1 cut(s)	1200
Bsu36I	CCTNAGG	1 cut(s)	1080
BsuRI	GGCC	7 cut(s)	522, 693, 955, 1056, 1684, 2183, 2364
BsuTUI	ATCGAT	1 cut(s)	1200
BtgI	CCRYGG	1 cut(s)	537
BtgZI	GCGATG	1 cut(s)	318
BtsCI	GGATG	4 cut(s)	76, 394, 1825, 2333
BtsI	GCAGTG	2 cut(s)	1195, 2397
BtsIMutI	CAGTG	3 cut(s)	1195, 1788, 2397
Cac8I	GCNNGC	7 cut(s)	87, 298, 957, 1551, 1716, 1899, 2141
CaiI	CAGNNNCTG	4 cut(s)	661, 1915, 2110, 2209
CfoI	GCGC	4 cut(s)	233, 324, 547, 1897
Cfr10I	RCCGGY	1 cut(s)	166
Cfr13I	GGNCC	4 cut(s)	218, 275, 1682, 2363
ClaI	ATCGAT	1 cut(s)	1200
CseI	GACGC	2 cut(s)	878, 1103
CsiI	ACCWGGT	1 cut(s)	2059
Csp6I	GTAC	2 cut(s)	551, 2498
CspAI	ACCGGT	1 cut(s)	166
CviQI	GTAC	2 cut(s)	551, 2498
DpnI	GATC	8 cut(s)	573, 675, 1483, 1506, 1622, 2044, 2201, 2493
DpnII	GATC	8 cut(s)	571, 673, 1481, 1504, 1620, 2042, 2199, 2491
DraI	TTTAAA	1 cut(s)	1353
DraIII	CACNNNGTG	1 cut(s)	1070
EaeI	YGGCCR	2 cut(s)	520, 1054
Eam1104I	CTCTTC	4 cut(s)	130, 355, 1962, 2262
EarI	CTCTTC	4 cut(s)	130, 355, 1962, 2262
Ecl136II	GAGCTC	1 cut(s)	108
Eco130I	CCWWGG	4 cut(s)	64, 537, 688, 2017
Eco147I	AGGCCT	1 cut(s)	2183
Eco24I	GRGCYC	3 cut(s)	110, 790, 2458
Eco32I	GATATC	1 cut(s)	616
Eco47I	GGWCC	2 cut(s)	218, 275
Eco53kI	GAGCTC	1 cut(s)	108
Eco72I	CACGTG	1 cut(s)	1229
Eco81I	CCTNAGG	1 cut(s)	1080
Eco91I	GGTNACC	1 cut(s)	2174
EcoICRI	GAGCTC	1 cut(s)	108
EcoO109I	RGGNCCY	1 cut(s)	275
EcoO65I	GGTNACC	1 cut(s)	2174
EcoRI	GAATTC	5 cut(s)	412, 430, 1370, 1939, 2516
EcoRII	CCWGG	6 cut(s)	522, 553, 1828, 2059, 2169, 2178
EcoRV	GATATC	1 cut(s)	616
EcoT14I	CCWWGG	4 cut(s)	64, 537, 688, 2017
EcoT38I	GRGCYC	3 cut(s)	110, 790, 2458
ErhI	CCWWGG	4 cut(s)	64, 537, 688, 2017
FalI	AAGNNNNNCTT	6 cut(s)	481, 513, 702, 734, 1383, 1415
FaqI	GGGAC	6 cut(s)	191, 261, 496, 571, 876, 2064
FauI	CCCGC	1 cut(s)	2228
FokI	GGATG	4 cut(s)	83, 401, 1812, 2320
FriOI	GRGCYC	3 cut(s)	110, 790, 2458
FspBI	CTAG	1 cut(s)	1164
GlaI	GCGC	4 cut(s)	232, 323, 546, 1896
GsuI	CTGGAG	3 cut(s)	42, 291, 1718
HaeIII	GGCC	7 cut(s)	522, 693, 955, 1056, 1684, 2183, 2364
HapII	CCGG	4 cut(s)	167, 694, 2039, 2459
HgaI	GACGC	2 cut(s)	878, 1103
HhaI	GCGC	4 cut(s)	233, 324, 547, 1897
Hin6I	GCGC	4 cut(s)	231, 322, 545, 1895
HinP1I	GCGC	4 cut(s)	231, 322, 545, 1895
HincII	GTYRAC	2 cut(s)	94, 1657
HindII	GTYRAC	2 cut(s)	94, 1657
HinfI	GANTC	6 cut(s)	311, 451, 697, 1194, 1429, 1912
HpaI	GTTAAC	1 cut(s)	94
HpaII	CCGG	4 cut(s)	167, 694, 2039, 2459
HphI	GGTGA	3 cut(s)	33, 713, 1438
Hpy166II	GTNNAC	2 cut(s)	94, 1657
Hpy188I	TCNGA	6 cut(s)	164, 222, 1452, 1486, 1627, 1863
Hpy8I	GTNNAC	2 cut(s)	94, 1657
HpyCH4III	ACNGT	1 cut(s)	657
HpyCH4IV	ACGT	2 cut(s)	509, 1228
HpySE526I	ACGT	2 cut(s)	509, 1228
HspAI	GCGC	4 cut(s)	231, 322, 545, 1895
KspAI	GTTAAC	1 cut(s)	94
Kzo9I	GATC	8 cut(s)	571, 673, 1481, 1504, 1620, 2042, 2199, 2491
LmnI	GCTCC	7 cut(s)	542, 1423, 1737, 1759, 1877, 2171, 2374
LweI	GCATC	8 cut(s)	241, 309, 341, 915, 1728, 1737, 1834, 1979
MabI	ACCWGGT	1 cut(s)	2059
MaeI	CTAG	1 cut(s)	1164
MaeII	ACGT	2 cut(s)	509, 1228
MaeIII	GTNAC	8 cut(s)	244, 657, 705, 991, 2121, 2174, 2357, 2432
MalI	GATC	8 cut(s)	573, 675, 1483, 1506, 1622, 2044, 2201, 2493
MboI	GATC	8 cut(s)	571, 673, 1481, 1504, 1620, 2042, 2199, 2491
MfeI	CAATTG	1 cut(s)	1686
MflI	RGATCY	7 cut(s)	571, 673, 1481, 1504, 1620, 2042, 2491
MhlI	GDGCHC	5 cut(s)	110, 790, 916, 1777, 2458
MlsI	TGGCCA	2 cut(s)	522, 1056
MluI	ACGCGT	1 cut(s)	1095
MluNI	TGGCCA	2 cut(s)	522, 1056
MlyI	GAGTC	2 cut(s)	320, 1203
MmeI	TCCRAC	3 cut(s)	378, 1242, 2016
Mox20I	TGGCCA	2 cut(s)	522, 1056
MroXI	GAANNNNTTC	4 cut(s)	630, 1158, 1395, 1398
MscI	TGGCCA	2 cut(s)	522, 1056
MseI	TTAA	5 cut(s)	93, 885, 1170, 1352, 2538
Msp20I	TGGCCA	2 cut(s)	522, 1056
MspA1I	CMGCKG	6 cut(s)	946, 1538, 2110, 2119, 2235, 2324
MspI	CCGG	4 cut(s)	167, 694, 2039, 2459
MspR9I	CCNGG	8 cut(s)	524, 555, 1830, 2040, 2061, 2171, 2180, 2459
MunI	CAATTG	1 cut(s)	1686
MvaI	CCWGG	6 cut(s)	524, 555, 1830, 2061, 2171, 2180
MvnI	CGCG	2 cut(s)	547, 1097
NciI	CCSGG	2 cut(s)	2040, 2459
NcoI	CCATGG	1 cut(s)	537
NdeII	GATC	8 cut(s)	571, 673, 1481, 1504, 1620, 2042, 2199, 2491
NlaIV	GGNNCC	7 cut(s)	6, 277, 573, 675, 2023, 2044, 2167
NmeAIII	GCCGAG	1 cut(s)	1690
NmuCI	GTSAC	3 cut(s)	244, 2121, 2357
NspI	RCATGY	4 cut(s)	322, 370, 1718, 2563
PaeI	GCATGC	1 cut(s)	1718
PasI	CCCWGGG	1 cut(s)	2170
PceI	AGGCCT	1 cut(s)	2183
PciI	ACATGT	1 cut(s)	2559
PdmI	GAANNNNTTC	4 cut(s)	630, 1158, 1395, 1398
PfeI	GAWTC	4 cut(s)	451, 697, 1429, 1912
PflMI	CCANNNNNTGG	2 cut(s)	50, 1864
PfoI	TCCNGGA	1 cut(s)	1828
PinAI	ACCGGT	1 cut(s)	166
PleI	GAGTC	2 cut(s)	319, 1202
PmaCI	CACGTG	1 cut(s)	1229
PmlI	CACGTG	1 cut(s)	1229
PpsI	GAGTC	2 cut(s)	319, 1202
Ppu21I	YACGTR	1 cut(s)	1229
PpuMI	RGGWCCY	1 cut(s)	275
PscI	ACATGT	1 cut(s)	2559
Psp124BI	GAGCTC	1 cut(s)	110
Psp5II	RGGWCCY	1 cut(s)	275
Psp6I	CCWGG	6 cut(s)	522, 553, 1828, 2059, 2169, 2178
PspCI	CACGTG	1 cut(s)	1229
PspEI	GGTNACC	1 cut(s)	2174
PspGI	CCWGG	6 cut(s)	522, 553, 1828, 2059, 2169, 2178
PspN4I	GGNNCC	7 cut(s)	6, 277, 573, 675, 2023, 2044, 2167
PspPI	GGNCC	4 cut(s)	218, 275, 1682, 2363
PspPPI	RGGWCCY	1 cut(s)	275
PstI	CTGCAG	4 cut(s)	639, 783, 1667, 2115
PstNI	CAGNNNCTG	4 cut(s)	661, 1915, 2110, 2209
PsuI	RGATCY	7 cut(s)	571, 673, 1481, 1504, 1620, 2042, 2491
PvuII	CAGCTG	2 cut(s)	1538, 2110
RsaI	GTAC	2 cut(s)	552, 2499
RsaNI	GTAC	2 cut(s)	551, 2498
SacI	GAGCTC	1 cut(s)	110
SaqAI	TTAA	5 cut(s)	93, 885, 1170, 1352, 2538
Sau3AI	GATC	8 cut(s)	571, 673, 1481, 1504, 1620, 2042, 2199, 2491
Sau96I	GGNCC	4 cut(s)	218, 275, 1682, 2363
SchI	GAGTC	2 cut(s)	320, 1203
ScrFI	CCNGG	8 cut(s)	524, 555, 1830, 2040, 2061, 2171, 2180, 2459
SduI	GDGCHC	5 cut(s)	110, 790, 916, 1777, 2458
SexAI	ACCWGGT	1 cut(s)	2059
SfaNI	GCATC	8 cut(s)	241, 309, 341, 915, 1728, 1737, 1834, 1979
SfcI	CTRYAG	6 cut(s)	399, 635, 779, 1663, 2111, 2213
SinI	GGWCC	2 cut(s)	218, 275
SmlI	CTYRAG	1 cut(s)	103
SmoI	CTYRAG	1 cut(s)	103
SphI	GCATGC	1 cut(s)	1718
SseBI	AGGCCT	1 cut(s)	2183
SsiI	CCGC	8 cut(s)	946, 1722, 1902, 2025, 2028, 2119, 2235, 2324
SspI	AATATT	2 cut(s)	361, 932
SspMI	CTAG	1 cut(s)	1164
SstI	GAGCTC	1 cut(s)	110
StuI	AGGCCT	1 cut(s)	2183
StyD4I	CCNGG	8 cut(s)	522, 553, 1828, 2038, 2059, 2169, 2178, 2457
StyI	CCWWGG	4 cut(s)	64, 537, 688, 2017
TaaI	ACNGT	1 cut(s)	657
TaiI	ACGT	2 cut(s)	512, 1231
TaqI	TCGA	1 cut(s)	1200
TauI	GCSGC	5 cut(s)	949, 1904, 2027, 2030, 2327
TfiI	GAWTC	4 cut(s)	451, 697, 1429, 1912
Tru1I	TTAA	5 cut(s)	93, 885, 1170, 1352, 2538
Tru9I	TTAA	5 cut(s)	93, 885, 1170, 1352, 2538
TscAI	CASTG	3 cut(s)	1195, 1795, 2404
TseFI	GTSAC	3 cut(s)	244, 2121, 2357
Tsp45I	GTSAC	3 cut(s)	244, 2121, 2357
TspDTI	ATGAA	6 cut(s)	197, 1188, 1404, 1658, 1862, 1952
TspRI	CASTG	3 cut(s)	1195, 1795, 2404
Van91I	CCANNNNNTGG	2 cut(s)	50, 1864
VpaK11BI	GGWCC	2 cut(s)	218, 275
XapI	RAATTY	7 cut(s)	54, 412, 430, 1181, 1370, 1939, 2516
XceI	RCATGY	4 cut(s)	322, 370, 1718, 2563
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1064
XmnI	GAANNNNTTC	4 cut(s)	630, 1158, 1395, 1398
XspI	CTAG	1 cut(s)	1164

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.