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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G53220 AT5G53220 AT5G53220 AT5G53220 AT5G53220 AT5G53220 AT5G53220 |
| fragaria_vesca | FvH4_7g31000 FvH4_7g31000 FvH4_7g31000 FvH4_7g31000 |
| malus_domestica | MD01G1215100.v1.1 MD07G1284800.v1.1 |
| prunus_persica | Prupe.2G307000_v2.0.a1 |
| pyrus_communis | pycom01g22580 pycom07g25860 |
| rosa_chinensis | RchiOBHm_Chr1g0380081 |
| rosa_laevigata | RLG00000026334 |
| rosa_multiflora | Rmu_co8295257.1_g000001 Rmu_sc0001232.1_g000006 Rmu_sc0004184.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00279730 |
| rosa_rugosa | Rorug01G0417300 |
| rosa_samantha | Rh1AG441800 Rh1AG441900 Rh1AG442000 Rh1AG442100 Rh1AG442200 Rh1BG397400 Rh1CG410800 Rh1DG428200 |
| rosa_wichuraiana | Rw1G038410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 593 |
| AccB1I | GGYRCC | 1 cut(s) | 1194 |
| AccII | CGCG | 1 cut(s) | 639 |
| AciI | CCGC | 1 cut(s) | 1192 |
| AclWI | GGATC | 6 cut(s) | 590, 1126, 1520, 1533, 1805, 1818 |
| AcsI | RAATTY | 3 cut(s) | 710, 1243, 1665 |
| AcuI | CTGAAG | 3 cut(s) | 78, 1076, 1332 |
| AcyI | GRCGYC | 2 cut(s) | 1195, 1638 |
| AdeI | CACNNNGTG | 1 cut(s) | 1485 |
| AfaI | GTAC | 3 cut(s) | 607, 646, 754 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 482, 578 |
| AflIII | ACRYGT | 1 cut(s) | 1766 |
| AhlI | ACTAGT | 1 cut(s) | 1256 |
| AjnI | CCWGG | 3 cut(s) | 571, 856, 1643 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 227, 259 |
| Alw21I | GWGCWC | 1 cut(s) | 1558 |
| Alw26I | GTCTC | 3 cut(s) | 466, 1136, 1674 |
| AlwI | GGATC | 6 cut(s) | 590, 1126, 1520, 1533, 1805, 1818 |
| ApeKI | GCWGC | 3 cut(s) | 599, 1391, 1511 |
| ApoI | RAATTY | 3 cut(s) | 710, 1243, 1665 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1400, 1432 |
| AspA2I | CCTAGG | 1 cut(s) | 1198 |
| AspLEI | GCGC | 1 cut(s) | 1197 |
| AspS9I | GGNCC | 1 cut(s) | 1280 |
| AsuHPI | GGTGA | 3 cut(s) | 209, 1349, 1703 |
| AvaII | GGWCC | 1 cut(s) | 1280 |
| AvrII | CCTAGG | 1 cut(s) | 1198 |
| AxyI | CCTNAGG | 1 cut(s) | 477 |
| BamHI | GGATCC | 2 cut(s) | 1525, 1810 |
| BanI | GGYRCC | 1 cut(s) | 1194 |
| BanII | GRGCYC | 1 cut(s) | 1652 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1378, 1410 |
| BauI | CACGAG | 1 cut(s) | 1617 |
| Bbv12I | GWGCWC | 1 cut(s) | 1558 |
| BbvI | GCAGC | 3 cut(s) | 611, 1378, 1498 |
| BccI | CCATC | 5 cut(s) | 154, 250, 476, 597, 635 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 137, 171 |
| BciT130I | CCWGG | 3 cut(s) | 573, 858, 1645 |
| BclI | TGATCA | 2 cut(s) | 949, 1108 |
| BcoDI | GTCTC | 3 cut(s) | 466, 1136, 1674 |
| BcuI | ACTAGT | 1 cut(s) | 1256 |
| BfaI | CTAG | 4 cut(s) | 1173, 1199, 1257, 1398 |
| BfoI | RGCGCY | 1 cut(s) | 1198 |
| BfuAI | ACCTGC | 1 cut(s) | 593 |
| BglII | AGATCT | 2 cut(s) | 662, 1791 |
| BisI | GCNGC | 4 cut(s) | 600, 1193, 1392, 1512 |
| BlnI | CCTAGG | 1 cut(s) | 1198 |
| BlsI | GCNGC | 4 cut(s) | 601, 1194, 1393, 1513 |
| Bme1390I | CCNGG | 3 cut(s) | 573, 858, 1645 |
| Bme18I | GGWCC | 1 cut(s) | 1280 |
| BmgT120I | GGNCC | 1 cut(s) | 1280 |
| BmiI | GGNNCC | 3 cut(s) | 1196, 1527, 1812 |
| BmrFI | CCNGG | 3 cut(s) | 573, 858, 1645 |
| BmrI | ACTGGG | 1 cut(s) | 432 |
| BmsI | GCATC | 2 cut(s) | 643, 1159 |
| BmuI | ACTGGG | 1 cut(s) | 432 |
| BpuEI | CTTGAG | 1 cut(s) | 140 |
| BsaHI | GRCGYC | 2 cut(s) | 1195, 1638 |
| BsaI | GGTCTC | 2 cut(s) | 466, 1674 |
| BsaJI | CCNNGG | 4 cut(s) | 571, 1198, 1643, 1644 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 65, 95 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 482, 578 |
| Bse1I | ACTGG | 4 cut(s) | 427, 990, 1032, 1678 |
| Bse21I | CCTNAGG | 1 cut(s) | 477 |
| BseBI | CCWGG | 3 cut(s) | 573, 858, 1645 |
| BseDI | CCNNGG | 4 cut(s) | 571, 1198, 1643, 1644 |
| BseGI | GGATG | 5 cut(s) | 261, 283, 474, 487, 1297 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 482, 578 |
| BseMII | CTCAG | 1 cut(s) | 468 |
| BseNI | ACTGG | 4 cut(s) | 427, 990, 1032, 1678 |
| BseRI | GAGGAG | 5 cut(s) | 61, 64, 532, 1727, 1736 |
| BseXI | GCAGC | 3 cut(s) | 611, 1378, 1498 |
| Bsh1236I | CGCG | 1 cut(s) | 639 |
| BshNI | GGYRCC | 1 cut(s) | 1194 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1558 |
| BslFI | GGGAC | 1 cut(s) | 1612 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 482, 578 |
| BsmAI | GTCTC | 3 cut(s) | 466, 1136, 1674 |
| BsmFI | GGGAC | 1 cut(s) | 1612 |
| BsmI | GAATGC | 1 cut(s) | 1447 |
| Bso31I | GGTCTC | 2 cut(s) | 466, 1674 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1558, 1652 |
| Bsp68I | TCGCGA | 1 cut(s) | 639 |
| BspACI | CCGC | 1 cut(s) | 1192 |
| BspCNI | CTCAG | 1 cut(s) | 469 |
| BspFNI | CGCG | 1 cut(s) | 639 |
| BspLI | GGNNCC | 3 cut(s) | 1196, 1527, 1812 |
| BspMI | ACCTGC | 1 cut(s) | 593 |
| BspPI | GGATC | 6 cut(s) | 590, 1126, 1520, 1533, 1805, 1818 |
| BspT107I | GGYRCC | 1 cut(s) | 1194 |
| BspTNI | GGTCTC | 2 cut(s) | 466, 1674 |
| BsrI | ACTGG | 4 cut(s) | 427, 990, 1032, 1678 |
| BssECI | CCNNGG | 4 cut(s) | 571, 1198, 1643, 1644 |
| BssNI | GRCGYC | 2 cut(s) | 1195, 1638 |
| BssSI | CACGAG | 1 cut(s) | 1617 |
| BssT1I | CCWWGG | 1 cut(s) | 1198 |
| Bst2BI | CACGAG | 1 cut(s) | 1617 |
| Bst2UI | CCWGG | 3 cut(s) | 573, 858, 1645 |
| Bst4CI | ACNGT | 3 cut(s) | 806, 1708, 1785 |
| Bst6I | CTCTTC | 7 cut(s) | 54, 89, 162, 179, 230, 387, 1308 |
| BstACI | GRCGYC | 2 cut(s) | 1195, 1638 |
| BstC8I | GCNNGC | 5 cut(s) | 156, 442, 597, 930, 1509 |
| BstDEI | CTNAG | 7 cut(s) | 477, 551, 648, 1138, 1589, 1653, 1776 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 576 |
| BstF5I | GGATG | 5 cut(s) | 261, 283, 474, 487, 1297 |
| BstFNI | CGCG | 1 cut(s) | 639 |
| BstH2I | RGCGCY | 1 cut(s) | 1198 |
| BstHHI | GCGC | 1 cut(s) | 1197 |
| BstMAI | GTCTC | 3 cut(s) | 466, 1136, 1674 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1553 |
| BstNI | CCWGG | 3 cut(s) | 573, 858, 1645 |
| BstNSI | RCATGY | 1 cut(s) | 1507 |
| BstSCI | CCNGG | 3 cut(s) | 571, 856, 1643 |
| BstUI | CGCG | 1 cut(s) | 639 |
| BstV1I | GCAGC | 3 cut(s) | 611, 1378, 1498 |
| BstX2I | RGATCY | 6 cut(s) | 582, 662, 1118, 1525, 1791, 1810 |
| BstYI | RGATCY | 6 cut(s) | 582, 662, 1118, 1525, 1791, 1810 |
| Bsu36I | CCTNAGG | 1 cut(s) | 477 |
| BtgZI | GCGATG | 3 cut(s) | 173, 620, 654 |
| BtsCI | GGATG | 5 cut(s) | 261, 283, 474, 487, 1297 |
| BtsIMutI | CAGTG | 3 cut(s) | 805, 811, 1039 |
| BtuMI | TCGCGA | 1 cut(s) | 639 |
| BveI | ACCTGC | 1 cut(s) | 593 |
| Cac8I | GCNNGC | 5 cut(s) | 156, 442, 597, 930, 1509 |
| CfoI | GCGC | 1 cut(s) | 1197 |
| Cfr13I | GGNCC | 1 cut(s) | 1280 |
| CseI | GACGC | 1 cut(s) | 1646 |
| Csp6I | GTAC | 3 cut(s) | 606, 645, 753 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1600, 1635 |
| CviAII | CATG | 7 cut(s) | 505, 750, 759, 1106, 1504, 1540, 1727 |
| CviQI | GTAC | 3 cut(s) | 606, 645, 753 |
| DdeI | CTNAG | 7 cut(s) | 477, 551, 648, 1138, 1589, 1653, 1776 |
| DinI | GGCGCC | 1 cut(s) | 1196 |
| DraI | TTTAAA | 1 cut(s) | 924 |
| DraIII | CACNNNGTG | 1 cut(s) | 1485 |
| Eam1104I | CTCTTC | 7 cut(s) | 54, 89, 162, 179, 230, 387, 1308 |
| EarI | CTCTTC | 7 cut(s) | 54, 89, 162, 179, 230, 387, 1308 |
| Eco130I | CCWWGG | 1 cut(s) | 1198 |
| Eco24I | GRGCYC | 1 cut(s) | 1652 |
| Eco31I | GGTCTC | 2 cut(s) | 466, 1674 |
| Eco32I | GATATC | 1 cut(s) | 796 |
| Eco47I | GGWCC | 1 cut(s) | 1280 |
| Eco57I | CTGAAG | 3 cut(s) | 78, 1076, 1332 |
| Eco81I | CCTNAGG | 1 cut(s) | 477 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 576 |
| EcoRI | GAATTC | 2 cut(s) | 710, 1243 |
| EcoRII | CCWGG | 3 cut(s) | 571, 856, 1643 |
| EcoRV | GATATC | 1 cut(s) | 796 |
| EcoT14I | CCWWGG | 1 cut(s) | 1198 |
| EcoT38I | GRGCYC | 1 cut(s) | 1652 |
| EgeI | GGCGCC | 1 cut(s) | 1196 |
| EheI | GGCGCC | 1 cut(s) | 1196 |
| ErhI | CCWWGG | 1 cut(s) | 1198 |
| FaeI | CATG | 7 cut(s) | 508, 753, 762, 1109, 1507, 1543, 1730 |
| FaqI | GGGAC | 1 cut(s) | 1612 |
| FatI | CATG | 7 cut(s) | 504, 749, 758, 1105, 1503, 1539, 1726 |
| FauNDI | CATATG | 1 cut(s) | 883 |
| FbaI | TGATCA | 2 cut(s) | 949, 1108 |
| Fnu4HI | GCNGC | 4 cut(s) | 600, 1193, 1392, 1512 |
| FokI | GGATG | 5 cut(s) | 268, 290, 481, 494, 1304 |
| FriOI | GRGCYC | 1 cut(s) | 1652 |
| Fsp4HI | GCNGC | 4 cut(s) | 600, 1193, 1392, 1512 |
| FspBI | CTAG | 4 cut(s) | 1173, 1199, 1257, 1398 |
| GlaI | GCGC | 1 cut(s) | 1196 |
| GluI | GCNGC | 4 cut(s) | 600, 1193, 1392, 1512 |
| HaeII | RGCGCY | 1 cut(s) | 1198 |
| HgaI | GACGC | 1 cut(s) | 1646 |
| HhaI | GCGC | 1 cut(s) | 1197 |
| Hin1I | GRCGYC | 2 cut(s) | 1195, 1638 |
| Hin1II | CATG | 7 cut(s) | 508, 753, 762, 1109, 1507, 1543, 1730 |
| Hin6I | GCGC | 1 cut(s) | 1195 |
| HinP1I | GCGC | 1 cut(s) | 1195 |
| HincII | GTYRAC | 2 cut(s) | 420, 1636 |
| HindII | GTYRAC | 2 cut(s) | 420, 1636 |
| HindIII | AAGCTT | 1 cut(s) | 152 |
| HinfI | GANTC | 6 cut(s) | 250, 428, 887, 1037, 1322, 1403 |
| HpaI | GTTAAC | 1 cut(s) | 420 |
| HphI | GGTGA | 3 cut(s) | 209, 1349, 1703 |
| Hpy166II | GTNNAC | 5 cut(s) | 420, 608, 1363, 1432, 1636 |
| Hpy188I | TCNGA | 9 cut(s) | 255, 1042, 1123, 1254, 1327, 1372, 1381, 1420, 1698 |
| Hpy188III | TCNNGA | 8 cut(s) | 119, 275, 638, 953, 1078, 1094, 1529, 1830 |
| Hpy8I | GTNNAC | 5 cut(s) | 420, 608, 1363, 1432, 1636 |
| HpyAV | CCTTC | 4 cut(s) | 8, 183, 484, 1328 |
| HpyCH4III | ACNGT | 3 cut(s) | 806, 1708, 1785 |
| HpyCH4IV | ACGT | 1 cut(s) | 1768 |
| HpyCH4V | TGCA | 4 cut(s) | 595, 735, 1514, 1539 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1553 |
| HpyF3I | CTNAG | 7 cut(s) | 477, 551, 648, 1138, 1589, 1653, 1776 |
| HpySE526I | ACGT | 1 cut(s) | 1768 |
| Hsp92I | GRCGYC | 2 cut(s) | 1195, 1638 |
| Hsp92II | CATG | 7 cut(s) | 508, 753, 762, 1109, 1507, 1543, 1730 |
| HspAI | GCGC | 1 cut(s) | 1195 |
| KasI | GGCGCC | 1 cut(s) | 1194 |
| Ksp22I | TGATCA | 2 cut(s) | 949, 1108 |
| KspAI | GTTAAC | 1 cut(s) | 420 |
| LmnI | GCTCC | 4 cut(s) | 208, 519, 751, 1723 |
| Lsp1109I | GCAGC | 3 cut(s) | 611, 1378, 1498 |
| LweI | GCATC | 2 cut(s) | 643, 1159 |
| MaeI | CTAG | 4 cut(s) | 1173, 1199, 1257, 1398 |
| MaeII | ACGT | 1 cut(s) | 1768 |
| MaeIII | GTNAC | 6 cut(s) | 764, 800, 968, 1027, 1034, 1769 |
| MflI | RGATCY | 6 cut(s) | 582, 662, 1118, 1525, 1791, 1810 |
| MhlI | GDGCHC | 2 cut(s) | 1558, 1652 |
| MluCI | AATT | 7 cut(s) | 201, 710, 980, 1243, 1270, 1612, 1665 |
| Mly113I | GGCGCC | 1 cut(s) | 1195 |
| MlyI | GAGTC | 2 cut(s) | 1031, 1412 |
| MmeI | TCCRAC | 7 cut(s) | 57, 63, 225, 315, 378, 475, 1698 |
| MseI | TTAA | 5 cut(s) | 126, 204, 419, 627, 923 |
| MslI | CAYNNNNRTG | 1 cut(s) | 639 |
| MspA1I | CMGCKG | 1 cut(s) | 706 |
| MspR9I | CCNGG | 3 cut(s) | 573, 858, 1645 |
| Mva1269I | GAATGC | 1 cut(s) | 1447 |
| MvaI | CCWGG | 3 cut(s) | 573, 858, 1645 |
| MvnI | CGCG | 1 cut(s) | 639 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1553 |
| NarI | GGCGCC | 1 cut(s) | 1195 |
| NdeI | CATATG | 1 cut(s) | 883 |
| NlaIII | CATG | 7 cut(s) | 508, 753, 762, 1109, 1507, 1543, 1730 |
| NlaIV | GGNNCC | 3 cut(s) | 1196, 1527, 1812 |
| NmuCI | GTSAC | 3 cut(s) | 800, 1027, 1034 |
| NruI | TCGCGA | 1 cut(s) | 639 |
| NspI | RCATGY | 1 cut(s) | 1507 |
| PasI | CCCWGGG | 1 cut(s) | 1644 |
| PctI | GAATGC | 1 cut(s) | 1447 |
| PfeI | GAWTC | 4 cut(s) | 250, 428, 887, 1322 |
| PfoI | TCCNGGA | 1 cut(s) | 856 |
| PkrI | GCNGC | 4 cut(s) | 601, 1194, 1393, 1513 |
| PleI | GAGTC | 2 cut(s) | 1031, 1411 |
| PluTI | GGCGCC | 1 cut(s) | 1198 |
| PpsI | GAGTC | 2 cut(s) | 1031, 1411 |
| Psp6I | CCWGG | 3 cut(s) | 571, 856, 1643 |
| PspGI | CCWGG | 3 cut(s) | 571, 856, 1643 |
| PspN4I | GGNNCC | 3 cut(s) | 1196, 1527, 1812 |
| PspPI | GGNCC | 1 cut(s) | 1280 |
| PsuI | RGATCY | 6 cut(s) | 582, 662, 1118, 1525, 1791, 1810 |
| PvuII | CAGCTG | 1 cut(s) | 706 |
| RruI | TCGCGA | 1 cut(s) | 639 |
| RsaI | GTAC | 3 cut(s) | 607, 646, 754 |
| RsaNI | GTAC | 3 cut(s) | 606, 645, 753 |
| RseI | CAYNNNNRTG | 1 cut(s) | 639 |
| SaqAI | TTAA | 5 cut(s) | 126, 204, 419, 627, 923 |
| SatI | GCNGC | 4 cut(s) | 600, 1193, 1392, 1512 |
| Sau96I | GGNCC | 1 cut(s) | 1280 |
| SchI | GAGTC | 2 cut(s) | 1031, 1412 |
| ScrFI | CCNGG | 3 cut(s) | 573, 858, 1645 |
| SduI | GDGCHC | 2 cut(s) | 1558, 1652 |
| SfaNI | GCATC | 2 cut(s) | 643, 1159 |
| SfoI | GGCGCC | 1 cut(s) | 1196 |
| SinI | GGWCC | 1 cut(s) | 1280 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 639 |
| SmlI | CTYRAG | 1 cut(s) | 119 |
| SmoI | CTYRAG | 1 cut(s) | 119 |
| SpeI | ACTAGT | 1 cut(s) | 1256 |
| Sse9I | AATT | 7 cut(s) | 201, 710, 980, 1243, 1270, 1612, 1665 |
| SsiI | CCGC | 1 cut(s) | 1192 |
| SspDI | GGCGCC | 1 cut(s) | 1194 |
| SspI | AATATT | 2 cut(s) | 1060, 1455 |
| SspMI | CTAG | 4 cut(s) | 1173, 1199, 1257, 1398 |
| StyD4I | CCNGG | 3 cut(s) | 571, 856, 1643 |
| StyI | CCWWGG | 1 cut(s) | 1198 |
| TaaI | ACNGT | 3 cut(s) | 806, 1708, 1785 |
| TaiI | ACGT | 1 cut(s) | 1771 |
| TaqI | TCGA | 4 cut(s) | 369, 515, 546, 1276 |
| TasI | AATT | 7 cut(s) | 201, 710, 980, 1243, 1270, 1612, 1665 |
| TauI | GCSGC | 1 cut(s) | 1195 |
| TfiI | GAWTC | 4 cut(s) | 250, 428, 887, 1322 |
| Tru1I | TTAA | 5 cut(s) | 126, 204, 419, 627, 923 |
| Tru9I | TTAA | 5 cut(s) | 126, 204, 419, 627, 923 |
| TscAI | CASTG | 3 cut(s) | 805, 811, 1039 |
| TseFI | GTSAC | 3 cut(s) | 800, 1027, 1034 |
| TseI | GCWGC | 3 cut(s) | 599, 1391, 1511 |
| Tsp45I | GTSAC | 3 cut(s) | 800, 1027, 1034 |
| TspDTI | ATGAA | 6 cut(s) | 126, 477, 828, 865, 870, 1320 |
| TspGWI | ACGGA | 2 cut(s) | 421, 720 |
| TspRI | CASTG | 3 cut(s) | 805, 811, 1039 |
| VpaK11BI | GGWCC | 1 cut(s) | 1280 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 576 |
| XapI | RAATTY | 3 cut(s) | 710, 1243, 1665 |
| XceI | RCATGY | 1 cut(s) | 1507 |
| XmaJI | CCTAGG | 1 cut(s) | 1198 |
| XspI | CTAG | 4 cut(s) | 1173, 1199, 1257, 1398 |