No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G53220 AT5G53220 AT5G53220 AT5G53220 AT5G53220 AT5G53220 AT5G53220 |
| fragaria_vesca | FvH4_7g31000 FvH4_7g31000 FvH4_7g31000 FvH4_7g31000 |
| malus_domestica | MD01G1215100.v1.1 MD07G1284800.v1.1 |
| prunus_persica | Prupe.2G307000_v2.0.a1 |
| pyrus_communis | pycom01g22580 pycom07g25860 |
| rosa_chinensis | RchiOBHm_Chr1g0380081 |
| rosa_laevigata | RLG00000026334 |
| rosa_multiflora | Rmu_co8295257.1_g000001 Rmu_sc0001232.1_g000006 Rmu_sc0004184.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00279730 |
| rosa_rugosa | Rorug01G0417300 |
| rosa_samantha | Rh1AG441800 Rh1AG441900 Rh1AG442000 Rh1AG442100 Rh1AG442200 Rh1BG397400 Rh1CG410800 Rh1DG428200 |
| rosa_wichuraiana | Rw1G038410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 982 |
| AccI | GTMKAC | 1 cut(s) | 745 |
| AccII | CGCG | 4 cut(s) | 27, 29, 135, 1805 |
| AccIII | TCCGGA | 1 cut(s) | 1600 |
| AciI | CCGC | 6 cut(s) | 146, 411, 422, 486, 982, 1252 |
| AclWI | GGATC | 7 cut(s) | 463, 1180, 1592, 1605, 1729, 1877, 1890 |
| AcoI | YGGCCR | 1 cut(s) | 1731 |
| AcsI | RAATTY | 2 cut(s) | 1526, 1562 |
| AcuI | CTGAAG | 1 cut(s) | 1671 |
| AdeI | CACNNNGTG | 2 cut(s) | 654, 669 |
| AfaI | GTAC | 1 cut(s) | 1234 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 44, 120, 428, 821 |
| AhlI | ACTAGT | 2 cut(s) | 1085, 1319 |
| AjnI | CCWGG | 3 cut(s) | 363, 814, 1247 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 454, 486 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1413, 1445 |
| AluBI | AGCT | 8 cut(s) | 9, 280, 752, 1191, 1266, 1413, 1606, 1619 |
| AluI | AGCT | 8 cut(s) | 9, 280, 752, 1191, 1266, 1413, 1606, 1619 |
| Alw21I | GWGCWC | 4 cut(s) | 1072, 1297, 1630, 1682 |
| Alw26I | GTCTC | 3 cut(s) | 555, 611, 1746 |
| Alw44I | GTGCAC | 2 cut(s) | 1293, 1678 |
| AlwI | GGATC | 7 cut(s) | 463, 1180, 1592, 1605, 1729, 1877, 1890 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1199 |
| Aor13HI | TCCGGA | 1 cut(s) | 1600 |
| AoxI | GGCC | 2 cut(s) | 46, 1731 |
| ApaI | GGGCCC | 1 cut(s) | 50 |
| ApaLI | GTGCAC | 2 cut(s) | 1293, 1678 |
| ApeKI | GCWGC | 1 cut(s) | 483 |
| ApoI | RAATTY | 2 cut(s) | 1526, 1562 |
| AspLEI | GCGC | 3 cut(s) | 27, 29, 31 |
| AspS9I | GGNCC | 4 cut(s) | 46, 47, 361, 489 |
| AsuHPI | GGTGA | 5 cut(s) | 248, 901, 989, 1418, 1735 |
| AsuII | TTCGAA | 1 cut(s) | 1860 |
| AvaII | GGWCC | 2 cut(s) | 361, 489 |
| BaeGI | GKGCMC | 4 cut(s) | 50, 127, 1297, 1682 |
| BamHI | GGATCC | 2 cut(s) | 1597, 1882 |
| BanII | GRGCYC | 1 cut(s) | 50 |
| BauI | CACGAG | 1 cut(s) | 1296 |
| BbsI | GAAGAC | 1 cut(s) | 1308 |
| Bbv12I | GWGCWC | 4 cut(s) | 1072, 1297, 1630, 1682 |
| BbvI | GCAGC | 1 cut(s) | 495 |
| BccI | CCATC | 3 cut(s) | 677, 793, 814 |
| BceAI | ACGGC | 1 cut(s) | 1825 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 125, 159 |
| BciT130I | CCWGG | 3 cut(s) | 365, 816, 1249 |
| BclI | TGATCA | 1 cut(s) | 1336 |
| BcoDI | GTCTC | 3 cut(s) | 555, 611, 1746 |
| BcuI | ACTAGT | 2 cut(s) | 1085, 1319 |
| BfaI | CTAG | 3 cut(s) | 753, 1086, 1320 |
| BfmI | CTRYAG | 2 cut(s) | 576, 882 |
| BglII | AGATCT | 1 cut(s) | 1765 |
| BisI | GCNGC | 3 cut(s) | 422, 484, 1253 |
| BlsI | GCNGC | 3 cut(s) | 423, 485, 1254 |
| Bme1390I | CCNGG | 3 cut(s) | 365, 816, 1249 |
| Bme18I | GGWCC | 2 cut(s) | 361, 489 |
| BmgT120I | GGNCC | 4 cut(s) | 46, 47, 361, 489 |
| BmiI | GGNNCC | 7 cut(s) | 48, 49, 490, 804, 1486, 1599, 1884 |
| BmrFI | CCNGG | 3 cut(s) | 365, 816, 1249 |
| BmsI | GCATC | 6 cut(s) | 100, 366, 1264, 1444, 1453, 1699 |
| BoxI | GACNNNNGTC | 1 cut(s) | 74 |
| BpiI | GAAGAC | 1 cut(s) | 1308 |
| BpmI | CTGGAG | 1 cut(s) | 57 |
| Bpu14I | TTCGAA | 1 cut(s) | 1860 |
| BpuEI | CTTGAG | 2 cut(s) | 1115, 1288 |
| BsaAI | YACGTR | 1 cut(s) | 1160 |
| BsaI | GGTCTC | 1 cut(s) | 1746 |
| BsaJI | CCNNGG | 3 cut(s) | 613, 1227, 1247 |
| BsaWI | WCCGGW | 1 cut(s) | 1600 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 44, 120, 428, 821 |
| Bse1I | ACTGG | 2 cut(s) | 74, 132 |
| Bse3DI | GCAATG | 1 cut(s) | 664 |
| BseAI | TCCGGA | 1 cut(s) | 1600 |
| BseBI | CCWGG | 3 cut(s) | 365, 816, 1249 |
| BseDI | CCNNGG | 3 cut(s) | 613, 1227, 1247 |
| BseGI | GGATG | 8 cut(s) | 115, 196, 441, 595, 688, 806, 988, 1366 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 44, 120, 428, 821 |
| BseMI | GCAATG | 1 cut(s) | 664 |
| BseMII | CTCAG | 5 cut(s) | 12, 1203, 1206, 1328, 1503 |
| BseNI | ACTGG | 2 cut(s) | 74, 132 |
| BsePI | GCGCGC | 2 cut(s) | 25, 27 |
| BseRI | GAGGAG | 3 cut(s) | 263, 272, 1799 |
| BseSI | GKGCMC | 4 cut(s) | 50, 127, 1297, 1682 |
| BseXI | GCAGC | 1 cut(s) | 495 |
| Bsh1236I | CGCG | 4 cut(s) | 27, 29, 135, 1805 |
| BshFI | GGCC | 2 cut(s) | 48, 1733 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1072, 1297, 1630, 1682 |
| BsiSI | CCGG | 1 cut(s) | 1601 |
| BslFI | GGGAC | 1 cut(s) | 502 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 44, 120, 428, 821 |
| BsmAI | GTCTC | 3 cut(s) | 555, 611, 1746 |
| BsmFI | GGGAC | 1 cut(s) | 502 |
| BsnI | GGCC | 2 cut(s) | 48, 1733 |
| Bso31I | GGTCTC | 1 cut(s) | 1746 |
| Bsp119I | TTCGAA | 1 cut(s) | 1860 |
| Bsp120I | GGGCCC | 1 cut(s) | 46 |
| Bsp1286I | GDGCHC | 6 cut(s) | 50, 127, 1072, 1297, 1630, 1682 |
| Bsp13I | TCCGGA | 1 cut(s) | 1600 |
| Bsp19I | CCATGG | 1 cut(s) | 1227 |
| BspACI | CCGC | 6 cut(s) | 146, 411, 422, 486, 982, 1252 |
| BspANI | GGCC | 2 cut(s) | 48, 1733 |
| BspCNI | CTCAG | 5 cut(s) | 13, 1204, 1205, 1327, 1502 |
| BspEI | TCCGGA | 1 cut(s) | 1600 |
| BspFNI | CGCG | 4 cut(s) | 27, 29, 135, 1805 |
| BspHI | TCATGA | 1 cut(s) | 1459 |
| BspLI | GGNNCC | 7 cut(s) | 48, 49, 490, 804, 1486, 1599, 1884 |
| BspMAI | CTGCAG | 1 cut(s) | 886 |
| BspPI | GGATC | 7 cut(s) | 463, 1180, 1592, 1605, 1729, 1877, 1890 |
| BspT104I | TTCGAA | 1 cut(s) | 1860 |
| BspTNI | GGTCTC | 1 cut(s) | 1746 |
| BsrBI | CCGCTC | 1 cut(s) | 982 |
| BsrDI | GCAATG | 1 cut(s) | 664 |
| BsrI | ACTGG | 2 cut(s) | 74, 132 |
| BssECI | CCNNGG | 3 cut(s) | 613, 1227, 1247 |
| BssHII | GCGCGC | 2 cut(s) | 25, 27 |
| BssSI | CACGAG | 1 cut(s) | 1296 |
| BssT1I | CCWWGG | 2 cut(s) | 613, 1227 |
| Bst2BI | CACGAG | 1 cut(s) | 1296 |
| Bst2UI | CCWGG | 3 cut(s) | 365, 816, 1249 |
| Bst4CI | ACNGT | 7 cut(s) | 493, 669, 762, 977, 1237, 1780, 1857 |
| Bst6I | CTCTTC | 4 cut(s) | 150, 167, 1377, 1872 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 654 |
| BstBAI | YACGTR | 1 cut(s) | 1160 |
| BstBI | TTCGAA | 1 cut(s) | 1860 |
| BstC8I | GCNNGC | 7 cut(s) | 27, 29, 426, 646, 882, 1044, 1794 |
| BstDEI | CTNAG | 6 cut(s) | 21, 1192, 1212, 1314, 1489, 1848 |
| BstDSI | CCRYGG | 1 cut(s) | 1227 |
| BstEII | GGTNACC | 1 cut(s) | 907 |
| BstF5I | GGATG | 8 cut(s) | 115, 196, 441, 595, 688, 806, 988, 1366 |
| BstFNI | CGCG | 4 cut(s) | 27, 29, 135, 1805 |
| BstHHI | GCGC | 3 cut(s) | 27, 29, 31 |
| BstMAI | GTCTC | 3 cut(s) | 555, 611, 1746 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 654, 1463, 1625, 1802 |
| BstNI | CCWGG | 3 cut(s) | 365, 816, 1249 |
| BstNSI | RCATGY | 1 cut(s) | 1579 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 74 |
| BstPI | GGTNACC | 1 cut(s) | 907 |
| BstSCI | CCNGG | 3 cut(s) | 363, 814, 1247 |
| BstSFI | CTRYAG | 2 cut(s) | 576, 882 |
| BstSLI | GKGCMC | 4 cut(s) | 50, 127, 1297, 1682 |
| BstUI | CGCG | 4 cut(s) | 27, 29, 135, 1805 |
| BstV1I | GCAGC | 1 cut(s) | 495 |
| BstV2I | GAAGAC | 1 cut(s) | 1308 |
| BstX2I | RGATCY | 5 cut(s) | 1172, 1597, 1721, 1765, 1882 |
| BstYI | RGATCY | 5 cut(s) | 1172, 1597, 1721, 1765, 1882 |
| BsuRI | GGCC | 2 cut(s) | 48, 1733 |
| BtgI | CCRYGG | 1 cut(s) | 1227 |
| BtgZI | GCGATG | 1 cut(s) | 345 |
| BtsCI | GGATG | 8 cut(s) | 115, 196, 441, 595, 688, 806, 988, 1366 |
| BtsI | GCAGTG | 1 cut(s) | 1297 |
| BtsIMutI | CAGTG | 3 cut(s) | 125, 1200, 1297 |
| Cac8I | GCNNGC | 7 cut(s) | 27, 29, 426, 646, 882, 1044, 1794 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1199 |
| CciI | TCATGA | 1 cut(s) | 1459 |
| CfoI | GCGC | 3 cut(s) | 27, 29, 31 |
| Cfr13I | GGNCC | 4 cut(s) | 46, 47, 361, 489 |
| CseI | GACGC | 1 cut(s) | 1811 |
| Csp6I | GTAC | 1 cut(s) | 1233 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1672, 1707 |
| CviAII | CATG | 5 cut(s) | 961, 1228, 1460, 1576, 1612 |
| CviQI | GTAC | 1 cut(s) | 1233 |
| DdeI | CTNAG | 6 cut(s) | 21, 1192, 1212, 1314, 1489, 1848 |
| DraIII | CACNNNGTG | 2 cut(s) | 654, 669 |
| EaeI | YGGCCR | 1 cut(s) | 1731 |
| Eam1104I | CTCTTC | 4 cut(s) | 150, 167, 1377, 1872 |
| EarI | CTCTTC | 4 cut(s) | 150, 167, 1377, 1872 |
| Eco130I | CCWWGG | 2 cut(s) | 613, 1227 |
| Eco24I | GRGCYC | 1 cut(s) | 50 |
| Eco31I | GGTCTC | 1 cut(s) | 1746 |
| Eco47I | GGWCC | 2 cut(s) | 361, 489 |
| Eco57I | CTGAAG | 1 cut(s) | 1671 |
| Eco91I | GGTNACC | 1 cut(s) | 907 |
| EcoO109I | RGGNCCY | 2 cut(s) | 47, 361 |
| EcoO65I | GGTNACC | 1 cut(s) | 907 |
| EcoRII | CCWGG | 3 cut(s) | 363, 814, 1247 |
| EcoT14I | CCWWGG | 2 cut(s) | 613, 1227 |
| EcoT22I | ATGCAT | 1 cut(s) | 1143 |
| EcoT38I | GRGCYC | 1 cut(s) | 50 |
| ErhI | CCWWGG | 2 cut(s) | 613, 1227 |
| FaeI | CATG | 5 cut(s) | 964, 1231, 1463, 1579, 1615 |
| FaqI | GGGAC | 1 cut(s) | 502 |
| FatI | CATG | 5 cut(s) | 960, 1227, 1459, 1575, 1611 |
| FauI | CCCGC | 2 cut(s) | 404, 479 |
| FauNDI | CATATG | 1 cut(s) | 1798 |
| FbaI | TGATCA | 1 cut(s) | 1336 |
| FblI | GTMKAC | 1 cut(s) | 745 |
| Fnu4HI | GCNGC | 3 cut(s) | 422, 484, 1253 |
| FokI | GGATG | 8 cut(s) | 122, 203, 448, 602, 695, 793, 975, 1373 |
| FriOI | GRGCYC | 1 cut(s) | 50 |
| Fsp4HI | GCNGC | 3 cut(s) | 422, 484, 1253 |
| FspBI | CTAG | 3 cut(s) | 753, 1086, 1320 |
| GlaI | GCGC | 3 cut(s) | 26, 28, 30 |
| GluI | GCNGC | 3 cut(s) | 422, 484, 1253 |
| GsuI | CTGGAG | 1 cut(s) | 57 |
| HaeIII | GGCC | 2 cut(s) | 48, 1733 |
| HapII | CCGG | 1 cut(s) | 1601 |
| HgaI | GACGC | 1 cut(s) | 1811 |
| HhaI | GCGC | 3 cut(s) | 27, 29, 31 |
| Hin1II | CATG | 5 cut(s) | 964, 1231, 1463, 1579, 1615 |
| Hin6I | GCGC | 3 cut(s) | 25, 27, 29 |
| HinP1I | GCGC | 3 cut(s) | 25, 27, 29 |
| HincII | GTYRAC | 1 cut(s) | 1219 |
| HindII | GTYRAC | 1 cut(s) | 1219 |
| HindIII | AAGCTT | 1 cut(s) | 1411 |
| HinfI | GANTC | 9 cut(s) | 14, 70, 470, 784, 1091, 1439, 1516, 1670, 1837 |
| HpaII | CCGG | 1 cut(s) | 1601 |
| HphI | GGTGA | 5 cut(s) | 248, 901, 989, 1418, 1735 |
| Hpy166II | GTNNAC | 5 cut(s) | 746, 1219, 1295, 1504, 1680 |
| Hpy188III | TCNNGA | 9 cut(s) | 107, 403, 476, 521, 992, 1340, 1433, 1460, 1601 |
| Hpy8I | GTNNAC | 5 cut(s) | 746, 1219, 1295, 1504, 1680 |
| HpyAV | CCTTC | 7 cut(s) | 426, 433, 473, 533, 840, 1397, 1475 |
| HpyCH4III | ACNGT | 7 cut(s) | 493, 669, 762, 977, 1237, 1780, 1857 |
| HpyCH4IV | ACGT | 2 cut(s) | 1066, 1159 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 654, 1463, 1625, 1802 |
| HpyF3I | CTNAG | 6 cut(s) | 21, 1192, 1212, 1314, 1489, 1848 |
| HpySE526I | ACGT | 2 cut(s) | 1066, 1159 |
| Hsp92II | CATG | 5 cut(s) | 964, 1231, 1463, 1579, 1615 |
| HspAI | GCGC | 3 cut(s) | 25, 27, 29 |
| Kpn2I | TCCGGA | 1 cut(s) | 1600 |
| Ksp22I | TGATCA | 1 cut(s) | 1336 |
| LmnI | GCTCC | 2 cut(s) | 808, 1603 |
| Lsp1109I | GCAGC | 1 cut(s) | 495 |
| LweI | GCATC | 6 cut(s) | 100, 366, 1264, 1444, 1453, 1699 |
| MaeI | CTAG | 3 cut(s) | 753, 1086, 1320 |
| MaeII | ACGT | 2 cut(s) | 1066, 1159 |
| MaeIII | GTNAC | 6 cut(s) | 907, 1081, 1088, 1160, 1195, 1841 |
| MbiI | CCGCTC | 1 cut(s) | 982 |
| MfeI | CAATTG | 1 cut(s) | 462 |
| MflI | RGATCY | 5 cut(s) | 1172, 1597, 1721, 1765, 1882 |
| MhlI | GDGCHC | 6 cut(s) | 50, 127, 1072, 1297, 1630, 1682 |
| MluCI | AATT | 8 cut(s) | 84, 231, 368, 416, 462, 527, 1526, 1562 |
| MlyI | GAGTC | 4 cut(s) | 23, 64, 793, 1085 |
| MmeI | TCCRAC | 2 cut(s) | 366, 1374 |
| Mph1103I | ATGCAT | 1 cut(s) | 1143 |
| MroI | TCCGGA | 1 cut(s) | 1600 |
| MseI | TTAA | 5 cut(s) | 87, 162, 513, 1074, 1146 |
| MslI | CAYNNNNRTG | 2 cut(s) | 681, 1817 |
| MspA1I | CMGCKG | 2 cut(s) | 424, 486 |
| MspI | CCGG | 1 cut(s) | 1601 |
| MspR9I | CCNGG | 3 cut(s) | 365, 816, 1249 |
| MunI | CAATTG | 1 cut(s) | 462 |
| MvaI | CCWGG | 3 cut(s) | 365, 816, 1249 |
| MvnI | CGCG | 4 cut(s) | 27, 29, 135, 1805 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 654, 1463, 1625, 1802 |
| NcoI | CCATGG | 1 cut(s) | 1227 |
| NdeI | CATATG | 1 cut(s) | 1798 |
| NlaIII | CATG | 5 cut(s) | 964, 1231, 1463, 1579, 1615 |
| NlaIV | GGNNCC | 7 cut(s) | 48, 49, 490, 804, 1486, 1599, 1884 |
| NmeAIII | GCCGAG | 1 cut(s) | 1759 |
| NmuCI | GTSAC | 4 cut(s) | 907, 1088, 1160, 1195 |
| NsiI | ATGCAT | 1 cut(s) | 1143 |
| NspI | RCATGY | 1 cut(s) | 1579 |
| NspV | TTCGAA | 1 cut(s) | 1860 |
| PagI | TCATGA | 1 cut(s) | 1459 |
| PauI | GCGCGC | 2 cut(s) | 25, 27 |
| PfeI | GAWTC | 5 cut(s) | 470, 1439, 1516, 1670, 1837 |
| PkrI | GCNGC | 3 cut(s) | 423, 485, 1254 |
| PleI | GAGTC | 4 cut(s) | 22, 64, 792, 1085 |
| PpsI | GAGTC | 4 cut(s) | 22, 64, 792, 1085 |
| Ppu21I | YACGTR | 1 cut(s) | 1160 |
| PpuMI | RGGWCCY | 1 cut(s) | 361 |
| PshAI | GACNNNNGTC | 1 cut(s) | 74 |
| Psp5II | RGGWCCY | 1 cut(s) | 361 |
| Psp6I | CCWGG | 3 cut(s) | 363, 814, 1247 |
| PspEI | GGTNACC | 1 cut(s) | 907 |
| PspGI | CCWGG | 3 cut(s) | 363, 814, 1247 |
| PspN4I | GGNNCC | 7 cut(s) | 48, 49, 490, 804, 1486, 1599, 1884 |
| PspOMI | GGGCCC | 1 cut(s) | 46 |
| PspPI | GGNCC | 4 cut(s) | 46, 47, 361, 489 |
| PspPPI | RGGWCCY | 1 cut(s) | 361 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1225, 1257 |
| PstI | CTGCAG | 1 cut(s) | 886 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1199 |
| PsuI | RGATCY | 5 cut(s) | 1172, 1597, 1721, 1765, 1882 |
| PteI | GCGCGC | 2 cut(s) | 25, 27 |
| RsaI | GTAC | 1 cut(s) | 1234 |
| RsaNI | GTAC | 1 cut(s) | 1233 |
| RseI | CAYNNNNRTG | 2 cut(s) | 681, 1817 |
| SaqAI | TTAA | 5 cut(s) | 87, 162, 513, 1074, 1146 |
| SatI | GCNGC | 3 cut(s) | 422, 484, 1253 |
| Sau96I | GGNCC | 4 cut(s) | 46, 47, 361, 489 |
| SchI | GAGTC | 4 cut(s) | 23, 64, 793, 1085 |
| ScrFI | CCNGG | 3 cut(s) | 365, 816, 1249 |
| SduI | GDGCHC | 6 cut(s) | 50, 127, 1072, 1297, 1630, 1682 |
| SfaNI | GCATC | 6 cut(s) | 100, 366, 1264, 1444, 1453, 1699 |
| SfcI | CTRYAG | 2 cut(s) | 576, 882 |
| SfuI | TTCGAA | 1 cut(s) | 1860 |
| SinI | GGWCC | 2 cut(s) | 361, 489 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 681, 1817 |
| SmlI | CTYRAG | 2 cut(s) | 1130, 1267 |
| SmoI | CTYRAG | 2 cut(s) | 1130, 1267 |
| SpeI | ACTAGT | 2 cut(s) | 1085, 1319 |
| Sse9I | AATT | 8 cut(s) | 84, 231, 368, 416, 462, 527, 1526, 1562 |
| SsiI | CCGC | 6 cut(s) | 146, 411, 422, 486, 982, 1252 |
| SspI | AATATT | 3 cut(s) | 734, 853, 1078 |
| SspMI | CTAG | 3 cut(s) | 753, 1086, 1320 |
| StyD4I | CCNGG | 3 cut(s) | 363, 814, 1247 |
| StyI | CCWWGG | 2 cut(s) | 613, 1227 |
| TaaI | ACNGT | 7 cut(s) | 493, 669, 762, 977, 1237, 1780, 1857 |
| TaiI | ACGT | 2 cut(s) | 1069, 1162 |
| TaqI | TCGA | 5 cut(s) | 78, 1553, 1636, 1707, 1860 |
| TasI | AATT | 8 cut(s) | 84, 231, 368, 416, 462, 527, 1526, 1562 |
| TauI | GCSGC | 2 cut(s) | 424, 1255 |
| TfiI | GAWTC | 5 cut(s) | 470, 1439, 1516, 1670, 1837 |
| Tru1I | TTAA | 5 cut(s) | 87, 162, 513, 1074, 1146 |
| Tru9I | TTAA | 5 cut(s) | 87, 162, 513, 1074, 1146 |
| TscAI | CASTG | 3 cut(s) | 132, 1200, 1297 |
| TseFI | GTSAC | 4 cut(s) | 907, 1088, 1160, 1195 |
| TseI | GCWGC | 1 cut(s) | 483 |
| Tsp45I | GTSAC | 4 cut(s) | 907, 1088, 1160, 1195 |
| TspDTI | ATGAA | 7 cut(s) | 114, 207, 452, 540, 885, 1023, 1628 |
| TspGWI | ACGGA | 3 cut(s) | 260, 388, 642 |
| TspRI | CASTG | 3 cut(s) | 132, 1200, 1297 |
| VneI | GTGCAC | 2 cut(s) | 1293, 1678 |
| VpaK11BI | GGWCC | 2 cut(s) | 361, 489 |
| XapI | RAATTY | 2 cut(s) | 1526, 1562 |
| XceI | RCATGY | 1 cut(s) | 1579 |
| XmiI | GTMKAC | 1 cut(s) | 745 |
| XspI | CTAG | 3 cut(s) | 753, 1086, 1320 |
| Zsp2I | ATGCAT | 1 cut(s) | 1143 |