Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0011325

Physical Location & Seq

Genomic Coordinates Reverse (-)

2493912 .. 2496452

Gene Structure 2541 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1017000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGTGGAGGTATGCAGTGACAGCAAGAGCAAGAGCAGCGTCCCTTTCGACGCAGGCGGCGGCACGGATGCTGTCCGCAGCTCATCCAAACCACAAGGTGCTTTCCTCTAAAACACTAACTCCTCCTCTAGTTGATCAATTTCCTCATTTTTACACTAGATTCCAAAACCCTAGGTTCTTCTCTCAGCTCTCAGAAAACTCTAGGGATTCTGATTCCGCTCAAGGAGAAGAGCTACCTGCCCCTGTGGAATTTGGTGAAAATGTTGATTCCCAGCCGGACAATCTTGCCCCTGGGGATGGGTACGCGGAGGAAAAGTGTTCGGAGGGTGTTGATGTAGAGTTGCGGAAAGGGCAAGAGGTTTATGAGATTGATTTGGAGCAGCTGGAGAGTGTATTGTCTCTCCTTCAGAGCAGTGCTGATGGGAGTCTTGAGTCTAGTTTTGATGCTTTAAATTTGACTCTGCATTCTGAGTTTGTGGTTAAACTAGTCGAAACCCCGCTTGTTTTGGGTGAGAATTTGATTAGGTTTATTAAATGGGCTTTGAAGGAGAAACCCGAGTTTAGAGTCACTACTCACGTCCTCGATGCGCTTGTACGATCCACATGTAGTGGCCTTGTTAGGAAGAGAGATGTATACTTTCTATGGGATTTGGTTAAGGAGATTGGTGAGAAAGAAAATACTCTGTTGAATTTGGAAATTCTCAATGAATTGATATCCTCATTCTCAAAATTGGGTAAAGGGAAAGCTGCTTTTGAGGTGTTCAACAAGTTTGCTGATTTTGGATGTGTCCCGAATGCAGATTCATATTACTTTACAATTGAAGCACTCTGCAGGCGTTCGTTTTTTGATTGGGCTCAGTCTGTTTGCGAGAAGATGCTTGATGCAGGAGTCTTGCCTGATGGTGAGAGAGTCGGTAGGATCATATCTTGGTTTTGCAAGGGCAAAAAAGCTAAAGATGCCCATTTGGTTTATTTGTCAATGAAGGTGAAGAAGCAGGACCTGCCACGCTCGCCAGTTAATCTTTTGATCAGTTCACTCTGTAGGGAGGATGAAACTGTCAATTTAGCTCTAGAGATATTGGGTGATTTATCTGGAGAAGCACGGAAATATGGGATTAAGCCGTTTTCAGCTGTTGTTCAAGGATTGTGCAGGATAAAAGATGTTGATGGGGCCAAAAAATTGCTTCTTGAGATGACAAGGGAGGGCCCACATCCAGGAAATGCAGTTTTCAATTTGGTTATCAATGGCTATTCTAAGGCTGGGGATACGGGAGAGGCAATGGAGATGATGAAGCTAATGGAGAGTAGGGGGTTAAAACCAGATGTGTATACTTACACTGTTATTATGAGTGGTTATGCAAATGGGGGTCTGATGGAGGAGGCTTGTAAAATATTATCCCAAGCCAAAAAGAAGCATCCTAAACTGAGTCCTGTGACTTACCATACAATTATCCGTGGATTTTGCAAACTGGAAGATTTTGACGAAGGTTTAAAGTTTTTGGGTGAGATGAAACATTTTGGGGTCCAACCTAATGTTGATGAGTACAGTAAGTTGATCCAATCTCTCTGTCTTAAGGCTTTGGATTGGGGAACAGCAGAGAAATTGCTTGAAGAAATGAAGGATAACGGGTTGCATCTCAATGGGATTACAAGGGGTCTTATAAGAGCAGTCAAGGAACTACAGGAGGGGGAAATAGAGATTGCAGAAGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

571

Amino Acids

63.63

Weight (kDa)

5.6

Isoelectric Point (pI)

31.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	234 - 278	5.3e-06	PPR repeat family
PPR_3	PF13812	394 - 452	1e-05	Pentatricopeptide repeat domain
PPR_2	PF13041	407 - 454	5.1e-14	PPR repeat family
PPR	PF01535	409 - 438	1.5e-06	PPR repeat
PPR_3	PF13812	433 - 484	2.3e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	436 - 467	1e-06	PPR repeat
PPR_2	PF13041	444 - 489	1.7e-08	PPR repeat family
PPR_2	PF13041	478 - 523	1.9e-09	PPR repeat family
PPR	PF01535	478 - 508	2.6e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011325)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02650
fragaria_vesca	FvH4_6g27990
malus_domestica	MD00G1017000.v1.1
prunus_persica	Prupe.6G365500_v2.0.a1 Prupe.6G365500_v2.0.a1
pyrus_communis	pycom04g22030 pycom12g24250
rosa_chinensis	RchiOBHm_Chr2g0131651
rosa_laevigata	RLG00000019202
rosa_multiflora	Rmu_sc0002589.1_g000013 Rmu_sc0006926.1_g000033 Rmu_sc0042933.1_g000001
rosa_roxburghii	Rroxscaffold_2G00112740
rosa_rugosa	Rorug02G0298600 Rorug02G0298700
rosa_samantha	Rh2AG351400 Rh2BG358300 Rh2CG336900 Rh2DG375600
rosa_wichuraiana	Rw2G028540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1661
Acc36I	ACCTGC	2 cut(s)	244, 1008
AccBSI	CCGCTC	1 cut(s)	218
AccI	GTMKAC	2 cut(s)	633, 1328
AccII	CGCG	1 cut(s)	305
AciI	CCGC	7 cut(s)	56, 59, 75, 216, 305, 343, 497
AclWI	GGATC	3 cut(s)	591, 926, 1549
AcsI	RAATTY	5 cut(s)	248, 451, 514, 688, 696
AcuI	CTGAAG	1 cut(s)	389
AdeI	CACNNNGTG	1 cut(s)	97
AfaI	GTAC	3 cut(s)	302, 594, 1544
AfiI	CCNNNNNNNGG	2 cut(s)	296, 1214
AflII	CTTAAG	1 cut(s)	1571
AflIII	ACRYGT	1 cut(s)	602
AgsI	TTSAA	7 cut(s)	544, 688, 763, 821, 1139, 1231, 1610
AhlI	ACTAGT	1 cut(s)	484
AjiI	CACGTC	1 cut(s)	577
AjnI	CCWGG	2 cut(s)	289, 1213
AluBI	AGCT	9 cut(s)	80, 187, 232, 382, 746, 950, 1067, 1130, 1294
AluI	AGCT	9 cut(s)	80, 187, 232, 382, 746, 950, 1067, 1130, 1294
Alw26I	GTCTC	1 cut(s)	402
AlwI	GGATC	3 cut(s)	591, 926, 1549
AlwNI	CAGNNNCTG	1 cut(s)	1000
Ama87I	CYCGRG	1 cut(s)	554
AoxI	GGCC	3 cut(s)	610, 1170, 1204
ApaI	GGGCCC	1 cut(s)	1208
ApeKI	GCWGC	4 cut(s)	35, 77, 379, 746
ApoI	RAATTY	5 cut(s)	248, 451, 514, 688, 696
AspA2I	CCTAGG	1 cut(s)	170
AspLEI	GCGC	1 cut(s)	589
AspS9I	GGNCC	5 cut(s)	997, 1170, 1204, 1205, 1522
AsuHPI	GGTGA	7 cut(s)	266, 521, 677, 914, 997, 1094, 1514
AvaI	CYCGRG	1 cut(s)	554
AvaII	GGWCC	2 cut(s)	997, 1522
AvrII	CCTAGG	1 cut(s)	170
BaeGI	GKGCMC	1 cut(s)	1208
BanII	GRGCYC	2 cut(s)	856, 1208
BbvI	GCAGC	4 cut(s)	47, 89, 391, 733
BccI	CCATC	5 cut(s)	290, 413, 893, 1160, 1366
BceAI	ACGGC	1 cut(s)	1105
BciT130I	CCWGG	2 cut(s)	291, 1215
BciVI	GTATCC	1 cut(s)	1258
BclI	TGATCA	2 cut(s)	133, 1026
BcoDI	GTCTC	1 cut(s)	402
BcuI	ACTAGT	1 cut(s)	484
BfaI	CTAG	7 cut(s)	128, 156, 171, 201, 435, 485, 1070
BfmI	CTRYAG	3 cut(s)	829, 1039, 1679
BfrI	CTTAAG	1 cut(s)	1571
BfuAI	ACCTGC	2 cut(s)	244, 1008
BfuI	GTATCC	1 cut(s)	1258
BisI	GCNGC	6 cut(s)	36, 57, 60, 78, 380, 747
BlnI	CCTAGG	1 cut(s)	170
BlsI	GCNGC	6 cut(s)	37, 58, 61, 79, 381, 748
Bme1390I	CCNGG	2 cut(s)	291, 1215
Bme18I	GGWCC	2 cut(s)	997, 1522
BmeT110I	CYCGRG	1 cut(s)	554
BmgBI	CACGTC	1 cut(s)	577
BmgT120I	GGNCC	5 cut(s)	997, 1170, 1204, 1205, 1522
BmiI	GGNNCC	3 cut(s)	1171, 1206, 1523
BmrFI	CCNGG	2 cut(s)	291, 1215
BmsI	GCATC	8 cut(s)	57, 433, 574, 864, 871, 946, 1423, 1642
BpmI	CTGGAG	2 cut(s)	404, 1113
BpuEI	CTTGAG	3 cut(s)	204, 449, 1208
BsaJI	CCNNGG	4 cut(s)	170, 289, 290, 1453
BsaXI	ACNNNNNCTCC	4 cut(s)	103, 133, 299, 329
Bsc4I	CCNNNNNNNGG	2 cut(s)	296, 1214
Bse1I	ACTGG	2 cut(s)	1013, 1473
Bse3DI	GCAATG	1 cut(s)	1284
BseBI	CCWGG	2 cut(s)	291, 1215
BseDI	CCNNGG	4 cut(s)	170, 289, 290, 1453
BseGI	GGATG	7 cut(s)	72, 82, 301, 788, 1054, 1210, 1414
BseLI	CCNNNNNNNGG	2 cut(s)	296, 1214
BseMI	GCAATG	1 cut(s)	1284
BseMII	CTCAG	5 cut(s)	197, 204, 459, 869, 1415
BseNI	ACTGG	2 cut(s)	1013, 1473
BseRI	GAGGAG	3 cut(s)	111, 114, 1391
BseSI	GKGCMC	1 cut(s)	1208
BseXI	GCAGC	4 cut(s)	47, 89, 391, 733
BseYI	CCCAGC	2 cut(s)	270, 1259
BsgI	GTGCAG	1 cut(s)	1168
Bsh1236I	CGCG	1 cut(s)	305
BshFI	GGCC	3 cut(s)	612, 1172, 1206
BsiHKCI	CYCGRG	1 cut(s)	554
BsiSI	CCGG	1 cut(s)	275
BslFI	GGGAC	2 cut(s)	25, 773
BslI	CCNNNNNNNGG	2 cut(s)	296, 1214
BsmAI	GTCTC	1 cut(s)	402
BsmFI	GGGAC	2 cut(s)	25, 773
BsmI	GAATGC	2 cut(s)	463, 799
BsnI	GGCC	3 cut(s)	612, 1172, 1206
BsoBI	CYCGRG	1 cut(s)	554
Bsp120I	GGGCCC	1 cut(s)	1204
Bsp1286I	GDGCHC	2 cut(s)	856, 1208
Bsp143I	GATC	5 cut(s)	133, 596, 918, 1026, 1554
BspACI	CCGC	7 cut(s)	56, 59, 75, 216, 305, 343, 497
BspANI	GGCC	3 cut(s)	612, 1172, 1206
BspCNI	CTCAG	5 cut(s)	196, 203, 460, 868, 1416
BspFNI	CGCG	1 cut(s)	305
BspLI	GGNNCC	3 cut(s)	1171, 1206, 1523
BspMAI	CTGCAG	1 cut(s)	833
BspMI	ACCTGC	2 cut(s)	244, 1008
BspPI	GGATC	3 cut(s)	591, 926, 1549
BspQI	GCTCTTC	1 cut(s)	222
BspTI	CTTAAG	1 cut(s)	1571
BsrBI	CCGCTC	1 cut(s)	218
BsrDI	GCAATG	1 cut(s)	1284
BsrI	ACTGG	2 cut(s)	1013, 1473
BssECI	CCNNGG	4 cut(s)	170, 289, 290, 1453
BssMI	GATC	5 cut(s)	133, 596, 918, 1026, 1554
BssNAI	GTATAC	2 cut(s)	634, 1329
BssT1I	CCWWGG	1 cut(s)	170
Bst1107I	GTATAC	2 cut(s)	634, 1329
Bst2UI	CCWGG	2 cut(s)	291, 1215
Bst4CI	ACNGT	3 cut(s)	1057, 1339, 1547
Bst6I	CTCTTC	2 cut(s)	222, 617
BstAFI	CTTAAG	1 cut(s)	1571
BstAPI	GCANNNNNTGC	1 cut(s)	1000
BstC8I	GCNNGC	3 cut(s)	54, 833, 1010
BstDEI	CTNAG	6 cut(s)	183, 190, 468, 855, 1254, 1424
BstDSI	CCRYGG	1 cut(s)	1453
BstF5I	GGATG	7 cut(s)	72, 82, 301, 788, 1054, 1210, 1414
BstFNI	CGCG	1 cut(s)	305
BstHHI	GCGC	1 cut(s)	589
BstKTI	GATC	5 cut(s)	136, 599, 921, 1029, 1557
BstMAI	GTCTC	1 cut(s)	402
BstMBI	GATC	5 cut(s)	133, 596, 918, 1026, 1554
BstMWI	GCNNNNNNNGC	6 cut(s)	20, 35, 349, 956, 1000, 1009
BstNI	CCWGG	2 cut(s)	291, 1215
BstNSI	RCATGY	1 cut(s)	606
BstSCI	CCNGG	2 cut(s)	289, 1213
BstSFI	CTRYAG	3 cut(s)	829, 1039, 1679
BstSLI	GKGCMC	1 cut(s)	1208
BstUI	CGCG	1 cut(s)	305
BstV1I	GCAGC	4 cut(s)	47, 89, 391, 733
BstZ17I	GTATAC	2 cut(s)	634, 1329
BsuI	GTATCC	1 cut(s)	1258
BsuRI	GGCC	3 cut(s)	612, 1172, 1206
BtgI	CCRYGG	1 cut(s)	1453
BtrI	CACGTC	1 cut(s)	577
BtsCI	GGATG	7 cut(s)	72, 82, 301, 788, 1054, 1210, 1414
BtsI	GCAGTG	2 cut(s)	21, 418
BtsIMutI	CAGTG	3 cut(s)	21, 418, 1335
BveI	ACCTGC	2 cut(s)	244, 1008
Cac8I	GCNNGC	3 cut(s)	54, 833, 1010
CaiI	CAGNNNCTG	1 cut(s)	1000
CfoI	GCGC	1 cut(s)	589
Cfr13I	GGNCC	5 cut(s)	997, 1170, 1204, 1205, 1522
CseI	GACGC	2 cut(s)	27, 58
Csp6I	GTAC	3 cut(s)	301, 593, 1543
CviAII	CATG	1 cut(s)	603
CviQI	GTAC	3 cut(s)	301, 593, 1543
DdeI	CTNAG	6 cut(s)	183, 190, 468, 855, 1254, 1424
DpnI	GATC	5 cut(s)	135, 598, 920, 1028, 1556
DpnII	GATC	5 cut(s)	133, 596, 918, 1026, 1554
DraI	TTTAAA	2 cut(s)	450, 1491
DraIII	CACNNNGTG	1 cut(s)	97
Eam1104I	CTCTTC	2 cut(s)	222, 617
EarI	CTCTTC	2 cut(s)	222, 617
Eco130I	CCWWGG	1 cut(s)	170
Eco24I	GRGCYC	2 cut(s)	856, 1208
Eco32I	GATATC	1 cut(s)	714
Eco47I	GGWCC	2 cut(s)	997, 1522
Eco57I	CTGAAG	1 cut(s)	389
Eco88I	CYCGRG	1 cut(s)	554
EcoO109I	RGGNCCY	2 cut(s)	997, 1204
EcoRII	CCWGG	2 cut(s)	289, 1213
EcoRV	GATATC	1 cut(s)	714
EcoT14I	CCWWGG	1 cut(s)	170
EcoT38I	GRGCYC	2 cut(s)	856, 1208
ErhI	CCWWGG	1 cut(s)	170
FaeI	CATG	1 cut(s)	606
FaqI	GGGAC	2 cut(s)	25, 773
FatI	CATG	1 cut(s)	602
FauI	CCCGC	1 cut(s)	504
FbaI	TGATCA	2 cut(s)	133, 1026
FblI	GTMKAC	2 cut(s)	633, 1328
Fnu4HI	GCNGC	6 cut(s)	36, 57, 60, 78, 380, 747
FokI	GGATG	7 cut(s)	69, 79, 308, 795, 1061, 1197, 1401
FriOI	GRGCYC	2 cut(s)	856, 1208
Fsp4HI	GCNGC	6 cut(s)	36, 57, 60, 78, 380, 747
FspBI	CTAG	7 cut(s)	128, 156, 171, 201, 435, 485, 1070
GlaI	GCGC	1 cut(s)	588
GluI	GCNGC	6 cut(s)	36, 57, 60, 78, 380, 747
GsaI	CCCAGC	2 cut(s)	274, 1263
GsuI	CTGGAG	2 cut(s)	404, 1113
HaeIII	GGCC	3 cut(s)	612, 1172, 1206
HapII	CCGG	1 cut(s)	275
HgaI	GACGC	2 cut(s)	27, 58
HhaI	GCGC	1 cut(s)	589
Hin1II	CATG	1 cut(s)	606
Hin6I	GCGC	1 cut(s)	587
HinP1I	GCGC	1 cut(s)	587
HpaII	CCGG	1 cut(s)	275
HphI	GGTGA	7 cut(s)	266, 521, 677, 914, 997, 1094, 1514
Hpy166II	GTNNAC	3 cut(s)	634, 1034, 1329
Hpy188I	TCNGA	6 cut(s)	193, 211, 322, 408, 469, 1371
Hpy188III	TCNNGA	5 cut(s)	428, 790, 1070, 1092, 1187
Hpy8I	GTNNAC	3 cut(s)	634, 1034, 1329
Hpy99I	CGWCG	1 cut(s)	52
HpyAV	CCTTC	5 cut(s)	413, 538, 976, 1478, 1612
HpyCH4III	ACNGT	3 cut(s)	1057, 1339, 1547
HpyCH4IV	ACGT	1 cut(s)	576
HpyF10VI	GCNNNNNNNGC	6 cut(s)	20, 35, 349, 956, 1000, 1009
HpyF3I	CTNAG	6 cut(s)	183, 190, 468, 855, 1254, 1424
HpySE526I	ACGT	1 cut(s)	576
Hsp92II	CATG	1 cut(s)	606
HspAI	GCGC	1 cut(s)	587
Ksp22I	TGATCA	2 cut(s)	133, 1026
Kzo9I	GATC	5 cut(s)	133, 596, 918, 1026, 1554
LguI	GCTCTTC	1 cut(s)	222
LmnI	GCTCC	1 cut(s)	376
Lsp1109I	GCAGC	4 cut(s)	47, 89, 391, 733
LweI	GCATC	8 cut(s)	57, 433, 574, 864, 871, 946, 1423, 1642
MaeI	CTAG	7 cut(s)	128, 156, 171, 201, 435, 485, 1070
MaeII	ACGT	1 cut(s)	576
MaeIII	GTNAC	3 cut(s)	16, 565, 1432
MalI	GATC	5 cut(s)	135, 598, 920, 1028, 1556
MbiI	CCGCTC	1 cut(s)	218
MboI	GATC	5 cut(s)	133, 596, 918, 1026, 1554
MboII	GAAGA	7 cut(s)	169, 239, 634, 883, 1000, 1484, 1622
MfeI	CAATTG	1 cut(s)	816
MhlI	GDGCHC	2 cut(s)	856, 1208
MlyI	GAGTC	7 cut(s)	433, 440, 451, 573, 897, 918, 1435
MmeI	TCCRAC	1 cut(s)	1549
MseI	TTAA	9 cut(s)	449, 480, 531, 654, 1017, 1116, 1313, 1490, 1572
MslI	CAYNNNNRTG	1 cut(s)	1638
MspA1I	CMGCKG	2 cut(s)	382, 1130
MspCI	CTTAAG	1 cut(s)	1571
MspI	CCGG	1 cut(s)	275
MspR9I	CCNGG	2 cut(s)	291, 1215
MunI	CAATTG	1 cut(s)	816
Mva1269I	GAATGC	2 cut(s)	463, 799
MvaI	CCWGG	2 cut(s)	291, 1215
MvnI	CGCG	1 cut(s)	305
MwoI	GCNNNNNNNGC	6 cut(s)	20, 35, 349, 956, 1000, 1009
NdeII	GATC	5 cut(s)	133, 596, 918, 1026, 1554
NlaIII	CATG	1 cut(s)	606
NlaIV	GGNNCC	3 cut(s)	1171, 1206, 1523
NmuCI	GTSAC	3 cut(s)	16, 565, 1432
NspI	RCATGY	1 cut(s)	606
PasI	CCCWGGG	1 cut(s)	290
PciI	ACATGT	1 cut(s)	602
PciSI	GCTCTTC	1 cut(s)	222
PctI	GAATGC	2 cut(s)	463, 799
PfeI	GAWTC	5 cut(s)	159, 206, 212, 266, 800
PfoI	TCCNGGA	1 cut(s)	1213
PkrI	GCNGC	6 cut(s)	37, 58, 61, 79, 381, 748
PleI	GAGTC	7 cut(s)	432, 439, 451, 572, 896, 917, 1434
PpsI	GAGTC	7 cut(s)	432, 439, 451, 572, 896, 917, 1434
PpuMI	RGGWCCY	1 cut(s)	997
PscI	ACATGT	1 cut(s)	602
PsiI	TTATAA	1 cut(s)	1661
Psp5II	RGGWCCY	1 cut(s)	997
Psp6I	CCWGG	2 cut(s)	289, 1213
PspFI	CCCAGC	2 cut(s)	270, 1259
PspGI	CCWGG	2 cut(s)	289, 1213
PspN4I	GGNNCC	3 cut(s)	1171, 1206, 1523
PspOMI	GGGCCC	1 cut(s)	1204
PspPI	GGNCC	5 cut(s)	997, 1170, 1204, 1205, 1522
PspPPI	RGGWCCY	1 cut(s)	997
PstI	CTGCAG	1 cut(s)	833
PstNI	CAGNNNCTG	1 cut(s)	1000
PvuII	CAGCTG	2 cut(s)	382, 1130
RsaI	GTAC	3 cut(s)	302, 594, 1544
RsaNI	GTAC	3 cut(s)	301, 593, 1543
RseI	CAYNNNNRTG	1 cut(s)	1638
SapI	GCTCTTC	1 cut(s)	222
SaqAI	TTAA	9 cut(s)	449, 480, 531, 654, 1017, 1116, 1313, 1490, 1572
SatI	GCNGC	6 cut(s)	36, 57, 60, 78, 380, 747
Sau3AI	GATC	5 cut(s)	133, 596, 918, 1026, 1554
Sau96I	GGNCC	5 cut(s)	997, 1170, 1204, 1205, 1522
SchI	GAGTC	7 cut(s)	433, 440, 451, 573, 897, 918, 1435
ScrFI	CCNGG	2 cut(s)	291, 1215
SduI	GDGCHC	2 cut(s)	856, 1208
SfaNI	GCATC	8 cut(s)	57, 433, 574, 864, 871, 946, 1423, 1642
SfcI	CTRYAG	3 cut(s)	829, 1039, 1679
SinI	GGWCC	2 cut(s)	997, 1522
SmiMI	CAYNNNNRTG	1 cut(s)	1638
SmlI	CTYRAG	4 cut(s)	219, 428, 1187, 1571
SmoI	CTYRAG	4 cut(s)	219, 428, 1187, 1571
SpeI	ACTAGT	1 cut(s)	484
SsiI	CCGC	7 cut(s)	56, 59, 75, 216, 305, 343, 497
SspI	AATATT	1 cut(s)	1392
SspMI	CTAG	7 cut(s)	128, 156, 171, 201, 435, 485, 1070
StyD4I	CCNGG	2 cut(s)	289, 1213
StyI	CCWWGG	1 cut(s)	170
TaaI	ACNGT	3 cut(s)	1057, 1339, 1547
TaiI	ACGT	1 cut(s)	579
TaqI	TCGA	3 cut(s)	47, 489, 582
TatI	WGTACW	1 cut(s)	1542
TauI	GCSGC	2 cut(s)	59, 62
TfiI	GAWTC	5 cut(s)	159, 206, 212, 266, 800
Tru1I	TTAA	9 cut(s)	449, 480, 531, 654, 1017, 1116, 1313, 1490, 1572
Tru9I	TTAA	9 cut(s)	449, 480, 531, 654, 1017, 1116, 1313, 1490, 1572
TscAI	CASTG	3 cut(s)	21, 418, 1342
TseFI	GTSAC	3 cut(s)	16, 565, 1432
TseI	GCWGC	4 cut(s)	35, 77, 379, 746
Tsp45I	GTSAC	3 cut(s)	16, 565, 1432
TspDTI	ATGAA	7 cut(s)	720, 792, 995, 1065, 1304, 1523, 1631
TspGWI	ACGGA	3 cut(s)	79, 1117, 1442
TspRI	CASTG	3 cut(s)	21, 418, 1342
Vha464I	CTTAAG	1 cut(s)	1571
VpaK11BI	GGWCC	2 cut(s)	997, 1522
XapI	RAATTY	5 cut(s)	248, 451, 514, 688, 696
XbaI	TCTAGA	1 cut(s)	1069
XceI	RCATGY	1 cut(s)	606
XmaJI	CCTAGG	1 cut(s)	170
XmiI	GTMKAC	2 cut(s)	633, 1328
XspI	CTAG	7 cut(s)	128, 156, 171, 201, 435, 485, 1070

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.