Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0011325

Physical Location & Seq

Genomic Coordinates Forward (+)

24579816 .. 24581516

Gene Structure 1701 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g24250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGTGGAGGTCTGCAGTGACAGCAAGAGCAGCGTCCCTTTCGACGCGGGCGGCGGCACGGACGCTGCGCGCAGCTCATCCAAACCACAAGGTGCTTTCCTCTAAAACCCTAACCCCTCCTCTAGTTGATCAATCTCCCCATTTTCAGACTAGATTCCAAAACCCTAGGTTCTTCTCTCAGTTCTCAGAAATCCGTAGCGCTTCTGATTCCGCTCAAGGAGAAGAGCTTCCCGTGGGATTTGGTGAAAATGGTGATTCCCAGCTGGACAATCTTGCCGCTGGGAATGGGGATGGGGACGAAAAGGGTTCGGAGGGTGGTTATGTAGAGTTGCGGAAAGGGGAAGAGGTTTATGAGATTGATTTGCAGCAGCTGGAGAGTGTATTGTCTCTCCTTCAGAGCAGTGCTGGTGGGAGTCTTGAGTCTAGTTTTGATGCTTTAAATTTGACTCTGCATCCTGAGTTTGTGGTTAAACTAGTTCAAACACCGCTTGTTTTGGGTGAGAATTTGATTAGGTTTATTAAGTGGGCTTTGAAGGAGAAACCCGACTTTAGAGTCACTACCCATGTCCTCGATGCGCTTGTACGATCTACATGTAGTGGCCTTGTTAGGAAGAGAGATGTATACTTTTTGTGGGATTTGGTTGAGGAGATTGGTGAGAAAGAAAATACTCTGTTGAATTTGGAAATTCTCAATGACTTGATATCCTCATTCTCAAAATTGGGTAAAGGGAAAGCTGCTTTTGAGGTGTTCAACAAGTTTGCTTGTTTTGGATGTGTCCCGAATGCAGATTCATATTACTTTACAATTGAAGCACTCTGCAGGCGTTCATTTTTTGTTTGGGCTCAGTCTGTTTGCGGGAAGATGCTTGATGCAGGAGCCTTGCCTGATGGTGAGAGAGTCGGTAGGATCATATCTTGGTTTTGCAAGGGTAAAAATGCTAAAGATGCCCATTTGGTTTATTTGTCGGTGAAGGTGAAGAAACAGGACCTGCCACGCTCGCCGGTTAATCTTTTGATCAATTCACTCTGTAGGGAGGATGAAACCGTCAAACTAGCTCTAGATATGTTGGGTGATTTATCTGGAGAGGCACGGAAATATGGGATTAAGCCCTTTTCAACTGTTGTTCAAGGATTGTGCAGGATAAAAGATGTTGATGGGGCCAAACAATTGCTTCTTGAGATGACAAGGGAGGGCCCACCTCCAGGAAATGCAGTTTTCAATTTGGTTATCAATGGTTATTCTAAGGCTGGGGATATGGGAGAGGCAATGGAGATGATGAAGCTAATGGAGAGTAGGGGGTTGAAACCAGATGTGTATACTTACACTGTTCTTATACGTGGCTATGTAAATGGGGGTCAGATGGAGGAGGCTTGTAAAATATTGTCCCAAGCCAAAAAGAAGCATCCGAAACTGGGTCCTGTGACTTACCATACACTCATCCGTGGATTTTGTAAACTGGAAGATTTTGACAAAGGTTTGAAGTTGTTGGGTGAGATGAAACATTTTGGGGTCCAACCTAATGTTGATGAGTACAATAAGTTGGTCCAATCTCTTTGTCTTAAGGCTCTGGATTGGGAAACGGCAGAGAAACTGCTTGAAGAAATGAAGGATAACGGGTTGCATCTCAATGGGATTACAAGGGGTCTTATAAGAGCAGTCAAGGAACTGCAGGAGGGAGAAGTAGAGATTGCAGAAGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

567

Amino Acids

62.79

Weight (kDa)

6.28

Isoelectric Point (pI)

30.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	378 - 521	8e-08	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	403 - 449	2.1e-15	PPR repeat family
PPR	PF01535	405 - 434	6.5e-07	PPR repeat
PPR_3	PF13812	429 - 468	6.8e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	432 - 463	8.3e-07	PPR repeat
PPR_2	PF13041	440 - 485	1.8e-09	PPR repeat family
PPR_2	PF13041	474 - 519	2.5e-09	PPR repeat family
PPR	PF01535	474 - 504	4.2e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011325)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02650
fragaria_vesca	FvH4_6g27990
malus_domestica	MD00G1017000.v1.1
prunus_persica	Prupe.6G365500_v2.0.a1 Prupe.6G365500_v2.0.a1
pyrus_communis	pycom04g22030 pycom12g24250
rosa_chinensis	RchiOBHm_Chr2g0131651
rosa_laevigata	RLG00000019202
rosa_multiflora	Rmu_sc0002589.1_g000013 Rmu_sc0006926.1_g000033 Rmu_sc0042933.1_g000001
rosa_roxburghii	Rroxscaffold_2G00112740
rosa_rugosa	Rorug02G0298600 Rorug02G0298700
rosa_samantha	Rh2AG351400 Rh2BG358300 Rh2CG336900 Rh2DG375600
rosa_wichuraiana	Rw2G028540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1649
AasI	GACNNNNNNGTC	1 cut(s)	551
Acc36I	ACCTGC	1 cut(s)	996
AccBSI	CCGCTC	1 cut(s)	212
AccI	GTMKAC	2 cut(s)	621, 1316
AccII	CGCG	2 cut(s)	46, 69
AciI	CCGC	8 cut(s)	46, 50, 53, 210, 276, 331, 485, 855
AclWI	GGATC	1 cut(s)	914
AcsI	RAATTY	4 cut(s)	439, 502, 676, 684
AcuI	CTGAAG	1 cut(s)	377
AdeI	CACNNNGTG	1 cut(s)	91
AfaI	GTAC	2 cut(s)	582, 1532
AfeI	AGCGCT	1 cut(s)	199
AfiI	CCNNNNNNNGG	2 cut(s)	1202, 1412
AflII	CTTAAG	1 cut(s)	1559
AflIII	ACRYGT	1 cut(s)	590
AhlI	ACTAGT	1 cut(s)	472
AjnI	CCWGG	1 cut(s)	1201
AluBI	AGCT	7 cut(s)	74, 226, 262, 370, 734, 1055, 1282
AluI	AGCT	7 cut(s)	74, 226, 262, 370, 734, 1055, 1282
Alw26I	GTCTC	1 cut(s)	390
AlwI	GGATC	1 cut(s)	914
AlwNI	CAGNNNCTG	2 cut(s)	370, 988
Aor51HI	AGCGCT	1 cut(s)	199
AoxI	GGCC	3 cut(s)	598, 1158, 1192
ApaI	GGGCCC	1 cut(s)	1196
ApeKI	GCWGC	6 cut(s)	29, 64, 71, 364, 367, 734
ApoI	RAATTY	4 cut(s)	439, 502, 676, 684
Asp700I	GAANNNNTTC	1 cut(s)	225
AspA2I	CCTAGG	1 cut(s)	164
AspLEI	GCGC	4 cut(s)	69, 71, 200, 577
AspS9I	GGNCC	7 cut(s)	985, 1158, 1192, 1193, 1415, 1510, 1543
AsuHPI	GGTGA	9 cut(s)	254, 263, 509, 665, 902, 979, 985, 1082, 1502
AvaII	GGWCC	4 cut(s)	985, 1415, 1510, 1543
AvrII	CCTAGG	1 cut(s)	164
BaeGI	GKGCMC	1 cut(s)	1196
BanII	GRGCYC	2 cut(s)	844, 1196
BbvI	GCAGC	6 cut(s)	41, 51, 83, 376, 379, 721
BccI	CCATC	4 cut(s)	284, 881, 1148, 1354
BceAI	ACGGC	1 cut(s)	1596
BciT130I	CCWGG	1 cut(s)	1203
BclI	TGATCA	2 cut(s)	127, 1014
BcoDI	GTCTC	1 cut(s)	390
BcuI	ACTAGT	1 cut(s)	472
BfaI	CTAG	7 cut(s)	122, 150, 165, 423, 473, 1052, 1058
BfmI	CTRYAG	4 cut(s)	12, 817, 1027, 1667
BfoI	RGCGCY	1 cut(s)	201
BfrI	CTTAAG	1 cut(s)	1559
BfuAI	ACCTGC	1 cut(s)	996
BisI	GCNGC	9 cut(s)	30, 51, 54, 65, 72, 276, 365, 368, 735
BlnI	CCTAGG	1 cut(s)	164
BlsI	GCNGC	9 cut(s)	31, 52, 55, 66, 73, 277, 366, 369, 736
Bme1390I	CCNGG	1 cut(s)	1203
Bme18I	GGWCC	4 cut(s)	985, 1415, 1510, 1543
BmgT120I	GGNCC	7 cut(s)	985, 1158, 1192, 1193, 1415, 1510, 1543
BmiI	GGNNCC	5 cut(s)	877, 1159, 1194, 1416, 1511
BmrFI	CCNGG	1 cut(s)	1203
BmrI	ACTGGG	1 cut(s)	1421
BmsI	GCATC	8 cut(s)	421, 460, 562, 852, 859, 934, 1411, 1630
BmuI	ACTGGG	1 cut(s)	1421
BpmI	CTGGAG	3 cut(s)	392, 1101, 1185
BpuEI	CTTGAG	3 cut(s)	198, 437, 1196
BsaAI	YACGTR	1 cut(s)	1337
BsaJI	CCNNGG	3 cut(s)	164, 231, 1441
Bsc4I	CCNNNNNNNGG	2 cut(s)	1202, 1412
Bse118I	RCCGGY	1 cut(s)	1000
Bse1I	ACTGG	2 cut(s)	1416, 1461
Bse3DI	GCAATG	1 cut(s)	1272
BseBI	CCWGG	1 cut(s)	1203
BseDI	CCNNGG	3 cut(s)	164, 231, 1441
BseGI	GGATG	7 cut(s)	76, 295, 451, 776, 1042, 1402, 1437
BseLI	CCNNNNNNNGG	2 cut(s)	1202, 1412
BseMI	GCAATG	1 cut(s)	1272
BseMII	CTCAG	4 cut(s)	191, 198, 447, 857
BseNI	ACTGG	2 cut(s)	1416, 1461
BsePI	GCGCGC	1 cut(s)	67
BseRI	GAGGAG	3 cut(s)	108, 659, 1379
BseSI	GKGCMC	1 cut(s)	1196
BseXI	GCAGC	6 cut(s)	41, 51, 83, 376, 379, 721
BseYI	CCCAGC	3 cut(s)	258, 278, 1247
BsgI	GTGCAG	1 cut(s)	1156
Bsh1236I	CGCG	2 cut(s)	46, 69
BshFI	GGCC	3 cut(s)	600, 1160, 1194
BsiSI	CCGG	1 cut(s)	1001
BslFI	GGGAC	4 cut(s)	19, 308, 761, 1369
BslI	CCNNNNNNNGG	2 cut(s)	1202, 1412
BsmAI	GTCTC	1 cut(s)	390
BsmFI	GGGAC	4 cut(s)	19, 308, 761, 1369
BsmI	GAATGC	1 cut(s)	787
BsnI	GGCC	3 cut(s)	600, 1160, 1194
Bsp120I	GGGCCC	1 cut(s)	1192
Bsp1286I	GDGCHC	2 cut(s)	844, 1196
Bsp143I	GATC	4 cut(s)	127, 584, 906, 1014
BspACI	CCGC	8 cut(s)	46, 50, 53, 210, 276, 331, 485, 855
BspANI	GGCC	3 cut(s)	600, 1160, 1194
BspCNI	CTCAG	4 cut(s)	190, 197, 448, 856
BspFNI	CGCG	2 cut(s)	46, 69
BspLI	GGNNCC	5 cut(s)	877, 1159, 1194, 1416, 1511
BspMAI	CTGCAG	3 cut(s)	16, 821, 1671
BspMI	ACCTGC	1 cut(s)	996
BspPI	GGATC	1 cut(s)	914
BspQI	GCTCTTC	1 cut(s)	216
BspTI	CTTAAG	1 cut(s)	1559
BsrBI	CCGCTC	1 cut(s)	212
BsrDI	GCAATG	1 cut(s)	1272
BsrFI	RCCGGY	1 cut(s)	1000
BsrI	ACTGG	2 cut(s)	1416, 1461
BssAI	RCCGGY	1 cut(s)	1000
BssECI	CCNNGG	3 cut(s)	164, 231, 1441
BssHII	GCGCGC	1 cut(s)	67
BssMI	GATC	4 cut(s)	127, 584, 906, 1014
BssNAI	GTATAC	2 cut(s)	622, 1317
BssT1I	CCWWGG	1 cut(s)	164
Bst1107I	GTATAC	2 cut(s)	622, 1317
Bst2UI	CCWGG	1 cut(s)	1203
Bst4CI	ACNGT	3 cut(s)	1045, 1120, 1327
Bst6I	CTCTTC	3 cut(s)	216, 336, 605
BstAFI	CTTAAG	1 cut(s)	1559
BstBAI	YACGTR	1 cut(s)	1337
BstC8I	GCNNGC	4 cut(s)	48, 69, 821, 998
BstDEI	CTNAG	5 cut(s)	177, 184, 456, 843, 1242
BstDSI	CCRYGG	2 cut(s)	231, 1441
BstF5I	GGATG	7 cut(s)	76, 295, 451, 776, 1042, 1402, 1437
BstFNI	CGCG	2 cut(s)	46, 69
BstH2I	RGCGCY	1 cut(s)	201
BstHHI	GCGC	4 cut(s)	69, 71, 200, 577
BstKTI	GATC	4 cut(s)	130, 587, 909, 1017
BstMAI	GTCTC	1 cut(s)	390
BstMBI	GATC	4 cut(s)	127, 584, 906, 1014
BstMWI	GCNNNNNNNGC	4 cut(s)	20, 29, 944, 997
BstNI	CCWGG	1 cut(s)	1203
BstNSI	RCATGY	1 cut(s)	594
BstSCI	CCNGG	1 cut(s)	1201
BstSFI	CTRYAG	4 cut(s)	12, 817, 1027, 1667
BstSLI	GKGCMC	1 cut(s)	1196
BstUI	CGCG	2 cut(s)	46, 69
BstV1I	GCAGC	6 cut(s)	41, 51, 83, 376, 379, 721
BstZ17I	GTATAC	2 cut(s)	622, 1317
BsuRI	GGCC	3 cut(s)	600, 1160, 1194
BtgI	CCRYGG	2 cut(s)	231, 1441
BtsCI	GGATG	7 cut(s)	76, 295, 451, 776, 1042, 1402, 1437
BtsI	GCAGTG	2 cut(s)	21, 406
BtsIMutI	CAGTG	3 cut(s)	21, 406, 1323
BveI	ACCTGC	1 cut(s)	996
Cac8I	GCNNGC	4 cut(s)	48, 69, 821, 998
CaiI	CAGNNNCTG	2 cut(s)	370, 988
CfoI	GCGC	4 cut(s)	69, 71, 200, 577
Cfr10I	RCCGGY	1 cut(s)	1000
Cfr13I	GGNCC	7 cut(s)	985, 1158, 1192, 1193, 1415, 1510, 1543
CseI	GACGC	3 cut(s)	21, 52, 70
Csp6I	GTAC	2 cut(s)	581, 1531
CviAII	CATG	2 cut(s)	563, 591
CviQI	GTAC	2 cut(s)	581, 1531
DdeI	CTNAG	5 cut(s)	177, 184, 456, 843, 1242
DpnI	GATC	4 cut(s)	129, 586, 908, 1016
DpnII	GATC	4 cut(s)	127, 584, 906, 1014
DraI	TTTAAA	1 cut(s)	438
DraIII	CACNNNGTG	1 cut(s)	91
DrdI	GACNNNNNNGTC	1 cut(s)	551
DseDI	GACNNNNNNGTC	1 cut(s)	551
Eam1104I	CTCTTC	3 cut(s)	216, 336, 605
EarI	CTCTTC	3 cut(s)	216, 336, 605
Eco130I	CCWWGG	1 cut(s)	164
Eco24I	GRGCYC	2 cut(s)	844, 1196
Eco32I	GATATC	1 cut(s)	702
Eco47I	GGWCC	4 cut(s)	985, 1415, 1510, 1543
Eco47III	AGCGCT	1 cut(s)	199
Eco57I	CTGAAG	1 cut(s)	377
EcoO109I	RGGNCCY	3 cut(s)	985, 1192, 1415
EcoRII	CCWGG	1 cut(s)	1201
EcoRV	GATATC	1 cut(s)	702
EcoT14I	CCWWGG	1 cut(s)	164
EcoT38I	GRGCYC	2 cut(s)	844, 1196
ErhI	CCWWGG	1 cut(s)	164
FaeI	CATG	2 cut(s)	566, 594
FaqI	GGGAC	4 cut(s)	19, 308, 761, 1369
FatI	CATG	2 cut(s)	562, 590
FauI	CCCGC	2 cut(s)	39, 848
FbaI	TGATCA	2 cut(s)	127, 1014
FblI	GTMKAC	2 cut(s)	621, 1316
Fnu4HI	GCNGC	9 cut(s)	30, 51, 54, 65, 72, 276, 365, 368, 735
FokI	GGATG	7 cut(s)	63, 302, 438, 783, 1049, 1389, 1424
FriOI	GRGCYC	2 cut(s)	844, 1196
Fsp4HI	GCNGC	9 cut(s)	30, 51, 54, 65, 72, 276, 365, 368, 735
FspBI	CTAG	7 cut(s)	122, 150, 165, 423, 473, 1052, 1058
GlaI	GCGC	4 cut(s)	68, 70, 199, 576
GluI	GCNGC	9 cut(s)	30, 51, 54, 65, 72, 276, 365, 368, 735
GsaI	CCCAGC	3 cut(s)	262, 282, 1251
GsuI	CTGGAG	3 cut(s)	392, 1101, 1185
HaeII	RGCGCY	1 cut(s)	201
HaeIII	GGCC	3 cut(s)	600, 1160, 1194
HapII	CCGG	1 cut(s)	1001
HgaI	GACGC	3 cut(s)	21, 52, 70
HhaI	GCGC	4 cut(s)	69, 71, 200, 577
Hin1II	CATG	2 cut(s)	566, 594
Hin6I	GCGC	4 cut(s)	67, 69, 198, 575
HinP1I	GCGC	4 cut(s)	67, 69, 198, 575
HinfI	GANTC	9 cut(s)	153, 206, 254, 412, 419, 445, 552, 788, 897
HpaII	CCGG	1 cut(s)	1001
HphI	GGTGA	9 cut(s)	254, 263, 509, 665, 902, 979, 985, 1082, 1502
Hpy166II	GTNNAC	3 cut(s)	622, 1317, 1454
Hpy188I	TCNGA	7 cut(s)	147, 187, 205, 310, 396, 1359, 1407
Hpy188III	TCNNGA	7 cut(s)	416, 455, 778, 1058, 1080, 1175, 1568
Hpy8I	GTNNAC	3 cut(s)	622, 1317, 1454
Hpy99I	CGWCG	1 cut(s)	46
HpyAV	CCTTC	4 cut(s)	401, 526, 964, 1600
HpyCH4III	ACNGT	3 cut(s)	1045, 1120, 1327
HpyCH4IV	ACGT	1 cut(s)	1336
HpyF10VI	GCNNNNNNNGC	4 cut(s)	20, 29, 944, 997
HpyF3I	CTNAG	5 cut(s)	177, 184, 456, 843, 1242
HpySE526I	ACGT	1 cut(s)	1336
Hsp92II	CATG	2 cut(s)	566, 594
HspAI	GCGC	4 cut(s)	67, 69, 198, 575
Ksp22I	TGATCA	2 cut(s)	127, 1014
Kzo9I	GATC	4 cut(s)	127, 584, 906, 1014
LguI	GCTCTTC	1 cut(s)	216
LmnI	GCTCC	1 cut(s)	875
Lsp1109I	GCAGC	6 cut(s)	41, 51, 83, 376, 379, 721
LweI	GCATC	8 cut(s)	421, 460, 562, 852, 859, 934, 1411, 1630
MaeI	CTAG	7 cut(s)	122, 150, 165, 423, 473, 1052, 1058
MaeII	ACGT	1 cut(s)	1336
MaeIII	GTNAC	3 cut(s)	16, 553, 1420
MalI	GATC	4 cut(s)	129, 586, 908, 1016
MbiI	CCGCTC	1 cut(s)	212
MboI	GATC	4 cut(s)	127, 584, 906, 1014
MboII	GAAGA	8 cut(s)	163, 233, 353, 622, 871, 988, 1472, 1610
MfeI	CAATTG	2 cut(s)	804, 1166
MhlI	GDGCHC	2 cut(s)	844, 1196
MluCI	AATT	9 cut(s)	439, 502, 676, 684, 716, 804, 1018, 1166, 1219
MlyI	GAGTC	5 cut(s)	421, 428, 439, 561, 906
MmeI	TCCRAC	1 cut(s)	1537
MroXI	GAANNNNTTC	1 cut(s)	225
MseI	TTAA	6 cut(s)	437, 468, 519, 1005, 1104, 1560
MslI	CAYNNNNRTG	1 cut(s)	1626
MspA1I	CMGCKG	3 cut(s)	262, 278, 370
MspCI	CTTAAG	1 cut(s)	1559
MspI	CCGG	1 cut(s)	1001
MspR9I	CCNGG	1 cut(s)	1203
MunI	CAATTG	2 cut(s)	804, 1166
Mva1269I	GAATGC	1 cut(s)	787
MvaI	CCWGG	1 cut(s)	1203
MvnI	CGCG	2 cut(s)	46, 69
MwoI	GCNNNNNNNGC	4 cut(s)	20, 29, 944, 997
NdeII	GATC	4 cut(s)	127, 584, 906, 1014
NlaIII	CATG	2 cut(s)	566, 594
NlaIV	GGNNCC	5 cut(s)	877, 1159, 1194, 1416, 1511
NmuCI	GTSAC	3 cut(s)	16, 553, 1420
NspI	RCATGY	1 cut(s)	594
PauI	GCGCGC	1 cut(s)	67
PciI	ACATGT	1 cut(s)	590
PciSI	GCTCTTC	1 cut(s)	216
PctI	GAATGC	1 cut(s)	787
PdmI	GAANNNNTTC	1 cut(s)	225
PfeI	GAWTC	4 cut(s)	153, 206, 254, 788
PfoI	TCCNGGA	1 cut(s)	1201
PkrI	GCNGC	9 cut(s)	31, 52, 55, 66, 73, 277, 366, 369, 736
PleI	GAGTC	5 cut(s)	420, 427, 439, 560, 905
PpsI	GAGTC	5 cut(s)	420, 427, 439, 560, 905
Ppu21I	YACGTR	1 cut(s)	1337
PpuMI	RGGWCCY	2 cut(s)	985, 1415
PscI	ACATGT	1 cut(s)	590
PsiI	TTATAA	1 cut(s)	1649
Psp5II	RGGWCCY	2 cut(s)	985, 1415
Psp6I	CCWGG	1 cut(s)	1201
PspFI	CCCAGC	3 cut(s)	258, 278, 1247
PspGI	CCWGG	1 cut(s)	1201
PspN4I	GGNNCC	5 cut(s)	877, 1159, 1194, 1416, 1511
PspOMI	GGGCCC	1 cut(s)	1192
PspPI	GGNCC	7 cut(s)	985, 1158, 1192, 1193, 1415, 1510, 1543
PspPPI	RGGWCCY	2 cut(s)	985, 1415
PstI	CTGCAG	3 cut(s)	16, 821, 1671
PstNI	CAGNNNCTG	2 cut(s)	370, 988
PteI	GCGCGC	1 cut(s)	67
PvuII	CAGCTG	2 cut(s)	262, 370
RsaI	GTAC	2 cut(s)	582, 1532
RsaNI	GTAC	2 cut(s)	581, 1531
RseI	CAYNNNNRTG	1 cut(s)	1626
SapI	GCTCTTC	1 cut(s)	216
SaqAI	TTAA	6 cut(s)	437, 468, 519, 1005, 1104, 1560
SatI	GCNGC	9 cut(s)	30, 51, 54, 65, 72, 276, 365, 368, 735
Sau3AI	GATC	4 cut(s)	127, 584, 906, 1014
Sau96I	GGNCC	7 cut(s)	985, 1158, 1192, 1193, 1415, 1510, 1543
SchI	GAGTC	5 cut(s)	421, 428, 439, 561, 906
ScrFI	CCNGG	1 cut(s)	1203
SduI	GDGCHC	2 cut(s)	844, 1196
SfaNI	GCATC	8 cut(s)	421, 460, 562, 852, 859, 934, 1411, 1630
SfcI	CTRYAG	4 cut(s)	12, 817, 1027, 1667
SinI	GGWCC	4 cut(s)	985, 1415, 1510, 1543
SmiMI	CAYNNNNRTG	1 cut(s)	1626
SmlI	CTYRAG	4 cut(s)	213, 416, 1175, 1559
SmoI	CTYRAG	4 cut(s)	213, 416, 1175, 1559
SpeI	ACTAGT	1 cut(s)	472
Sse9I	AATT	9 cut(s)	439, 502, 676, 684, 716, 804, 1018, 1166, 1219
SsiI	CCGC	8 cut(s)	46, 50, 53, 210, 276, 331, 485, 855
SspI	AATATT	1 cut(s)	1380
SspMI	CTAG	7 cut(s)	122, 150, 165, 423, 473, 1052, 1058
StyD4I	CCNGG	1 cut(s)	1201
StyI	CCWWGG	1 cut(s)	164
TaaI	ACNGT	3 cut(s)	1045, 1120, 1327
TaiI	ACGT	1 cut(s)	1339
TaqI	TCGA	2 cut(s)	41, 570
TasI	AATT	9 cut(s)	439, 502, 676, 684, 716, 804, 1018, 1166, 1219
TatI	WGTACW	1 cut(s)	1530
TauI	GCSGC	3 cut(s)	53, 56, 278
TfiI	GAWTC	4 cut(s)	153, 206, 254, 788
Tru1I	TTAA	6 cut(s)	437, 468, 519, 1005, 1104, 1560
Tru9I	TTAA	6 cut(s)	437, 468, 519, 1005, 1104, 1560
TscAI	CASTG	3 cut(s)	21, 406, 1330
TseFI	GTSAC	3 cut(s)	16, 553, 1420
TseI	GCWGC	6 cut(s)	29, 64, 71, 364, 367, 734
Tsp45I	GTSAC	3 cut(s)	16, 553, 1420
TspDTI	ATGAA	6 cut(s)	780, 816, 1053, 1292, 1511, 1619
TspGWI	ACGGA	4 cut(s)	73, 182, 1105, 1430
TspRI	CASTG	3 cut(s)	21, 406, 1330
Vha464I	CTTAAG	1 cut(s)	1559
VpaK11BI	GGWCC	4 cut(s)	985, 1415, 1510, 1543
XapI	RAATTY	4 cut(s)	439, 502, 676, 684
XbaI	TCTAGA	1 cut(s)	1057
XceI	RCATGY	1 cut(s)	594
XmaJI	CCTAGG	1 cut(s)	164
XmiI	GTMKAC	2 cut(s)	621, 1316
XmnI	GAANNNNTTC	1 cut(s)	225
XspI	CTAG	7 cut(s)	122, 150, 165, 423, 473, 1052, 1058

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.