Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0011325

Physical Location & Seq

Genomic Coordinates Forward (+)

22958225 .. 22959934

Gene Structure 1710 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g22030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1623 bp

ATGTGGAGGTATGCAGTGACAGCAAGAGCAAGAGCAGCGTTCCTTTCGACGCAGGCGGCGGCACGGGAGCTGTCCGCAGCTCATCCAAACCACAAGCTCTCAGAAAACCCTAGGGATTCTGATTCCGCTCAAGGAGAAGAGCTACCTGCTCCTGTGGGATTTGGTGAAAATGTTGATTCCCAGCCGGACAATCTTGCCCCTGGGGATGGGGACGCGCAGGAGAAGTGTTCGGAGGGTGTTGATGTAGAGTTGCGGAAAGGACAAGAGGTTTATGAGATTGATTTGGAGCAGCTGGAGAGTGTATTGTCTCTCCTTCAGAGCAGTGCTGATGGGAGTCTTGAGTCTAATTTTGATGCTTTAAATTTGACTCTGCATCCTGAGTTTGTGGTTAAACTAGTCGAAACCCCGCTTGTTTTGGGTGAGAATTTGATTAGGTTTATTAAATGGGCTTTGAAGGAGAAACCCGAGTTTAGAGTCACTACTCACGTCCTCGATGCGCTTGTACGATCCACATGTAGTGGCCTTGTTAGGAAGAGAGATGTATACTTTCTATGGGATTTTGTTAAGGAGATTGGTGAGAAAGAAAATACTTTGTTGAATTTGGAAATTCTCAATGAATTGATATCCTCATTCTCAAAATTGGGTAAAGGGAAAGCTGCTTTTGAGGTGTTCAACAAGTTTGCTGATTTTGGATGTGTCCCGAATGCAGATTCATATTACTTTACAATTGAAGCACTCTGCAGGCGTTCATTTTTTGATTGGGCTCTGTCTGTTTGCGAGAAGATGCTTGATGCAGGAGTCTTGCCTGATAGTGAGAGAGTCGGTAGGATCATATCTTGGTTTTGCAAGGGCGAAAAAGCTAAAGATGCCCATTTGGTTTATTCGTCAATGAAGGTGAAGATGCAGGACCTGCCACGCTCGCCAGTTAATCTTTTGATCAGTTCACTCTCTAGGGAGGATGAAACTGTCAATTTAGCTCTAGAGATATTGGGTGATTTATCTGGAGAAGCACGGAAATATGGGATTAAGCTGTTTTCAGCTGTTGTTCAAGGATTGTGCAGGATAAAAGATGTTGATGGGGCCAAAAAGTTGCTTCTTGAGATGACAAGGGAGGGCCCACATCCAGGAAATGCAGTTTTCAATTTGGTTATCAATGGCTATTCTAAGGCTGGGGATATGGGAGAGGCAATCGAGATGATGAAGCTAATGGAGAGTAGGGGGTTGAAGCCAGATGTGTATACTTACACTGTTATTATGAGTGGTTATGCAAATGGGGGTCTGATGGAGGAGGCTTGTAAAATATTATCCCAAGCCAAAAACAAGCATCCTAAACTGAGTCCTGTGACTTACCATACAATTATCCGTGGATTTTGCAAACTGGAAGATTTTGACGAAGGTTTAAAGTTGTTGGGTGAGATGAAACATTTTGGGGTCCAACCTAATGTTGATGAGTACAATAAGTTGATCCAATCTCTCTGTCTAAAGGCTTTGGATTGGAGAACAGCAGAGAAATTGCTTGAAGAAATGAAGGATAACGGGTTACATCTCAATGGGATTACAAGGGGTCTTATAAGAGCAGTCAAGGAACTACAGGAGGGGGAAATAGAGATTGCAGAAGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

541

Amino Acids

60.15

Weight (kDa)

5.26

Isoelectric Point (pI)

32.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	204 - 248	4.9e-06	PPR repeat family
PPR_2	PF13041	377 - 424	1e-14	PPR repeat family
PPR	PF01535	379 - 408	7e-07	PPR repeat
PPR_3	PF13812	403 - 455	7e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	406 - 437	9.7e-07	PPR repeat
PPR_2	PF13041	418 - 459	6.4e-06	PPR repeat family
PPR_3	PF13812	433 - 490	3.6e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	446 - 474	6.5e-06	PPR repeat
PPR_2	PF13041	448 - 493	5.7e-10	PPR repeat family
PPR	PF01535	448 - 478	6.8e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011325)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02650
fragaria_vesca	FvH4_6g27990
malus_domestica	MD00G1017000.v1.1
prunus_persica	Prupe.6G365500_v2.0.a1 Prupe.6G365500_v2.0.a1
pyrus_communis	pycom04g22030 pycom12g24250
rosa_chinensis	RchiOBHm_Chr2g0131651
rosa_laevigata	RLG00000019202
rosa_multiflora	Rmu_sc0002589.1_g000013 Rmu_sc0006926.1_g000033 Rmu_sc0042933.1_g000001
rosa_roxburghii	Rroxscaffold_2G00112740
rosa_rugosa	Rorug02G0298600 Rorug02G0298700
rosa_samantha	Rh2AG351400 Rh2BG358300 Rh2CG336900 Rh2DG375600
rosa_wichuraiana	Rw2G028540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1571
Acc36I	ACCTGC	2 cut(s)	154, 918
AccBSI	CCGCTC	1 cut(s)	128
AccI	GTMKAC	2 cut(s)	543, 1238
AccII	CGCG	1 cut(s)	215
AciI	CCGC	6 cut(s)	56, 59, 75, 126, 253, 407
AclWI	GGATC	3 cut(s)	501, 836, 1459
AcsI	RAATTY	4 cut(s)	361, 424, 598, 606
AcuI	CTGAAG	1 cut(s)	299
AfaI	GTAC	2 cut(s)	504, 1454
AfiI	CCNNNNNNNGG	2 cut(s)	206, 1124
AflIII	ACRYGT	1 cut(s)	512
AgsI	TTSAA	8 cut(s)	454, 598, 673, 731, 1049, 1141, 1225, 1520
AhlI	ACTAGT	1 cut(s)	394
AjiI	CACGTC	1 cut(s)	487
AjnI	CCWGG	2 cut(s)	199, 1123
Alw26I	GTCTC	1 cut(s)	312
AlwI	GGATC	3 cut(s)	501, 836, 1459
AlwNI	CAGNNNCTG	1 cut(s)	910
Ama87I	CYCGRG	1 cut(s)	464
AoxI	GGCC	3 cut(s)	520, 1080, 1114
ApaI	GGGCCC	1 cut(s)	1118
ApeKI	GCWGC	4 cut(s)	35, 77, 289, 656
ApoI	RAATTY	4 cut(s)	361, 424, 598, 606
AspA2I	CCTAGG	1 cut(s)	110
AspLEI	GCGC	2 cut(s)	217, 499
AspS9I	GGNCC	5 cut(s)	907, 1080, 1114, 1115, 1432
AsuHPI	GGTGA	6 cut(s)	176, 431, 587, 907, 1004, 1424
AvaI	CYCGRG	1 cut(s)	464
AvaII	GGWCC	2 cut(s)	907, 1432
AvrII	CCTAGG	1 cut(s)	110
BaeGI	GKGCMC	1 cut(s)	1118
BanII	GRGCYC	2 cut(s)	766, 1118
BbvI	GCAGC	4 cut(s)	47, 89, 301, 643
BccI	CCATC	4 cut(s)	200, 323, 1070, 1276
BciT130I	CCWGG	2 cut(s)	201, 1125
BclI	TGATCA	1 cut(s)	936
BcoDI	GTCTC	1 cut(s)	312
BcuI	ACTAGT	1 cut(s)	394
BfaI	CTAG	4 cut(s)	111, 395, 951, 980
BfmI	CTRYAG	2 cut(s)	739, 1589
BfuAI	ACCTGC	2 cut(s)	154, 918
BisI	GCNGC	6 cut(s)	36, 57, 60, 78, 290, 657
BlnI	CCTAGG	1 cut(s)	110
BlsI	GCNGC	6 cut(s)	37, 58, 61, 79, 291, 658
Bme1390I	CCNGG	2 cut(s)	201, 1125
Bme18I	GGWCC	2 cut(s)	907, 1432
BmeT110I	CYCGRG	1 cut(s)	464
BmgBI	CACGTC	1 cut(s)	487
BmgT120I	GGNCC	5 cut(s)	907, 1080, 1114, 1115, 1432
BmiI	GGNNCC	3 cut(s)	1081, 1116, 1433
BmrFI	CCNGG	2 cut(s)	201, 1125
BmsI	GCATC	8 cut(s)	343, 382, 484, 774, 781, 856, 891, 1333
BpmI	CTGGAG	2 cut(s)	314, 1023
BpuEI	CTTGAG	3 cut(s)	114, 359, 1118
BsaJI	CCNNGG	4 cut(s)	110, 199, 200, 1363
Bsc4I	CCNNNNNNNGG	2 cut(s)	206, 1124
Bse1I	ACTGG	2 cut(s)	923, 1383
BseBI	CCWGG	2 cut(s)	201, 1125
BseDI	CCNNGG	4 cut(s)	110, 199, 200, 1363
BseGI	GGATG	7 cut(s)	82, 211, 373, 698, 964, 1120, 1324
BseLI	CCNNNNNNNGG	2 cut(s)	206, 1124
BseMII	CTCAG	3 cut(s)	114, 369, 1325
BseNI	ACTGG	2 cut(s)	923, 1383
BseRI	GAGGAG	1 cut(s)	1301
BseSI	GKGCMC	1 cut(s)	1118
BseXI	GCAGC	4 cut(s)	47, 89, 301, 643
BseYI	CCCAGC	2 cut(s)	180, 1169
BsgI	GTGCAG	1 cut(s)	1078
Bsh1236I	CGCG	1 cut(s)	215
BshFI	GGCC	3 cut(s)	522, 1082, 1116
BsiHKCI	CYCGRG	1 cut(s)	464
BsiSI	CCGG	1 cut(s)	185
BslFI	GGGAC	2 cut(s)	224, 683
BslI	CCNNNNNNNGG	2 cut(s)	206, 1124
BsmAI	GTCTC	1 cut(s)	312
BsmFI	GGGAC	2 cut(s)	224, 683
BsmI	GAATGC	1 cut(s)	709
BsnI	GGCC	3 cut(s)	522, 1082, 1116
BsoBI	CYCGRG	1 cut(s)	464
Bsp120I	GGGCCC	1 cut(s)	1114
Bsp1286I	GDGCHC	2 cut(s)	766, 1118
Bsp143I	GATC	4 cut(s)	506, 828, 936, 1464
BspACI	CCGC	6 cut(s)	56, 59, 75, 126, 253, 407
BspANI	GGCC	3 cut(s)	522, 1082, 1116
BspCNI	CTCAG	3 cut(s)	113, 370, 1326
BspFNI	CGCG	1 cut(s)	215
BspLI	GGNNCC	3 cut(s)	1081, 1116, 1433
BspMAI	CTGCAG	1 cut(s)	743
BspMI	ACCTGC	2 cut(s)	154, 918
BspPI	GGATC	3 cut(s)	501, 836, 1459
BspQI	GCTCTTC	1 cut(s)	132
BsrBI	CCGCTC	1 cut(s)	128
BsrI	ACTGG	2 cut(s)	923, 1383
BssECI	CCNNGG	4 cut(s)	110, 199, 200, 1363
BssMI	GATC	4 cut(s)	506, 828, 936, 1464
BssNAI	GTATAC	2 cut(s)	544, 1239
BssT1I	CCWWGG	1 cut(s)	110
Bst1107I	GTATAC	2 cut(s)	544, 1239
Bst2UI	CCWGG	2 cut(s)	201, 1125
Bst4CI	ACNGT	2 cut(s)	967, 1249
Bst6I	CTCTTC	2 cut(s)	132, 527
BstAPI	GCANNNNNTGC	1 cut(s)	910
BstC8I	GCNNGC	3 cut(s)	54, 743, 920
BstDEI	CTNAG	4 cut(s)	100, 378, 1164, 1334
BstDSI	CCRYGG	1 cut(s)	1363
BstF5I	GGATG	7 cut(s)	82, 211, 373, 698, 964, 1120, 1324
BstFNI	CGCG	1 cut(s)	215
BstHHI	GCGC	2 cut(s)	217, 499
BstKTI	GATC	4 cut(s)	509, 831, 939, 1467
BstMAI	GTCTC	1 cut(s)	312
BstMBI	GATC	4 cut(s)	506, 828, 936, 1464
BstMWI	GCNNNNNNNGC	5 cut(s)	20, 35, 866, 910, 919
BstNI	CCWGG	2 cut(s)	201, 1125
BstNSI	RCATGY	1 cut(s)	516
BstSCI	CCNGG	2 cut(s)	199, 1123
BstSFI	CTRYAG	2 cut(s)	739, 1589
BstSLI	GKGCMC	1 cut(s)	1118
BstUI	CGCG	1 cut(s)	215
BstV1I	GCAGC	4 cut(s)	47, 89, 301, 643
BstZ17I	GTATAC	2 cut(s)	544, 1239
BsuRI	GGCC	3 cut(s)	522, 1082, 1116
BtgI	CCRYGG	1 cut(s)	1363
BtrI	CACGTC	1 cut(s)	487
BtsCI	GGATG	7 cut(s)	82, 211, 373, 698, 964, 1120, 1324
BtsI	GCAGTG	2 cut(s)	21, 328
BtsIMutI	CAGTG	3 cut(s)	21, 328, 1245
BveI	ACCTGC	2 cut(s)	154, 918
Cac8I	GCNNGC	3 cut(s)	54, 743, 920
CaiI	CAGNNNCTG	1 cut(s)	910
CfoI	GCGC	2 cut(s)	217, 499
Cfr13I	GGNCC	5 cut(s)	907, 1080, 1114, 1115, 1432
CseI	GACGC	2 cut(s)	58, 221
Csp6I	GTAC	2 cut(s)	503, 1453
CviAII	CATG	1 cut(s)	513
CviQI	GTAC	2 cut(s)	503, 1453
DdeI	CTNAG	4 cut(s)	100, 378, 1164, 1334
DpnI	GATC	4 cut(s)	508, 830, 938, 1466
DpnII	GATC	4 cut(s)	506, 828, 936, 1464
DraI	TTTAAA	2 cut(s)	360, 1401
Eam1104I	CTCTTC	2 cut(s)	132, 527
EarI	CTCTTC	2 cut(s)	132, 527
Eco130I	CCWWGG	1 cut(s)	110
Eco24I	GRGCYC	2 cut(s)	766, 1118
Eco32I	GATATC	1 cut(s)	624
Eco47I	GGWCC	2 cut(s)	907, 1432
Eco57I	CTGAAG	1 cut(s)	299
Eco88I	CYCGRG	1 cut(s)	464
EcoO109I	RGGNCCY	2 cut(s)	907, 1114
EcoRII	CCWGG	2 cut(s)	199, 1123
EcoRV	GATATC	1 cut(s)	624
EcoT14I	CCWWGG	1 cut(s)	110
EcoT38I	GRGCYC	2 cut(s)	766, 1118
ErhI	CCWWGG	1 cut(s)	110
FaeI	CATG	1 cut(s)	516
FaqI	GGGAC	2 cut(s)	224, 683
FatI	CATG	1 cut(s)	512
FauI	CCCGC	1 cut(s)	414
FbaI	TGATCA	1 cut(s)	936
FblI	GTMKAC	2 cut(s)	543, 1238
Fnu4HI	GCNGC	6 cut(s)	36, 57, 60, 78, 290, 657
FokI	GGATG	7 cut(s)	69, 218, 360, 705, 971, 1107, 1311
FriOI	GRGCYC	2 cut(s)	766, 1118
Fsp4HI	GCNGC	6 cut(s)	36, 57, 60, 78, 290, 657
FspBI	CTAG	4 cut(s)	111, 395, 951, 980
GlaI	GCGC	2 cut(s)	216, 498
GluI	GCNGC	6 cut(s)	36, 57, 60, 78, 290, 657
GsaI	CCCAGC	2 cut(s)	184, 1173
GsuI	CTGGAG	2 cut(s)	314, 1023
HaeIII	GGCC	3 cut(s)	522, 1082, 1116
HapII	CCGG	1 cut(s)	185
HgaI	GACGC	2 cut(s)	58, 221
HhaI	GCGC	2 cut(s)	217, 499
Hin1II	CATG	1 cut(s)	516
Hin6I	GCGC	2 cut(s)	215, 497
HinP1I	GCGC	2 cut(s)	215, 497
HpaII	CCGG	1 cut(s)	185
HphI	GGTGA	6 cut(s)	176, 431, 587, 907, 1004, 1424
Hpy166II	GTNNAC	3 cut(s)	544, 944, 1239
Hpy188I	TCNGA	5 cut(s)	103, 121, 232, 318, 1281
Hpy188III	TCNNGA	7 cut(s)	338, 377, 700, 980, 1002, 1097, 1192
Hpy8I	GTNNAC	3 cut(s)	544, 944, 1239
Hpy99I	CGWCG	1 cut(s)	52
HpyAV	CCTTC	5 cut(s)	323, 448, 886, 1388, 1522
HpyCH4III	ACNGT	2 cut(s)	967, 1249
HpyCH4IV	ACGT	1 cut(s)	486
HpyF10VI	GCNNNNNNNGC	5 cut(s)	20, 35, 866, 910, 919
HpyF3I	CTNAG	4 cut(s)	100, 378, 1164, 1334
HpySE526I	ACGT	1 cut(s)	486
Hsp92II	CATG	1 cut(s)	516
HspAI	GCGC	2 cut(s)	215, 497
Ksp22I	TGATCA	1 cut(s)	936
Kzo9I	GATC	4 cut(s)	506, 828, 936, 1464
LguI	GCTCTTC	1 cut(s)	132
LmnI	GCTCC	3 cut(s)	67, 154, 286
Lsp1109I	GCAGC	4 cut(s)	47, 89, 301, 643
LweI	GCATC	8 cut(s)	343, 382, 484, 774, 781, 856, 891, 1333
MaeI	CTAG	4 cut(s)	111, 395, 951, 980
MaeII	ACGT	1 cut(s)	486
MaeIII	GTNAC	4 cut(s)	16, 475, 1342, 1539
MalI	GATC	4 cut(s)	508, 830, 938, 1466
MbiI	CCGCTC	1 cut(s)	128
MboI	GATC	4 cut(s)	506, 828, 936, 1464
MboII	GAAGA	6 cut(s)	149, 544, 793, 910, 1394, 1532
MfeI	CAATTG	1 cut(s)	726
MhlI	GDGCHC	2 cut(s)	766, 1118
MlyI	GAGTC	7 cut(s)	343, 350, 361, 483, 807, 828, 1345
MmeI	TCCRAC	1 cut(s)	1459
MseI	TTAA	7 cut(s)	359, 390, 441, 564, 927, 1026, 1400
MslI	CAYNNNNRTG	1 cut(s)	1548
MspA1I	CMGCKG	2 cut(s)	292, 1040
MspI	CCGG	1 cut(s)	185
MspR9I	CCNGG	2 cut(s)	201, 1125
MunI	CAATTG	1 cut(s)	726
Mva1269I	GAATGC	1 cut(s)	709
MvaI	CCWGG	2 cut(s)	201, 1125
MvnI	CGCG	1 cut(s)	215
MwoI	GCNNNNNNNGC	5 cut(s)	20, 35, 866, 910, 919
NdeII	GATC	4 cut(s)	506, 828, 936, 1464
NlaIII	CATG	1 cut(s)	516
NlaIV	GGNNCC	3 cut(s)	1081, 1116, 1433
NmuCI	GTSAC	3 cut(s)	16, 475, 1342
NspI	RCATGY	1 cut(s)	516
PasI	CCCWGGG	1 cut(s)	200
PciI	ACATGT	1 cut(s)	512
PciSI	GCTCTTC	1 cut(s)	132
PctI	GAATGC	1 cut(s)	709
PfeI	GAWTC	4 cut(s)	116, 122, 176, 710
PfoI	TCCNGGA	1 cut(s)	1123
PkrI	GCNGC	6 cut(s)	37, 58, 61, 79, 291, 658
PleI	GAGTC	7 cut(s)	342, 349, 361, 482, 806, 827, 1344
PpsI	GAGTC	7 cut(s)	342, 349, 361, 482, 806, 827, 1344
PpuMI	RGGWCCY	1 cut(s)	907
PscI	ACATGT	1 cut(s)	512
PsiI	TTATAA	1 cut(s)	1571
Psp5II	RGGWCCY	1 cut(s)	907
Psp6I	CCWGG	2 cut(s)	199, 1123
PspFI	CCCAGC	2 cut(s)	180, 1169
PspGI	CCWGG	2 cut(s)	199, 1123
PspN4I	GGNNCC	3 cut(s)	1081, 1116, 1433
PspOMI	GGGCCC	1 cut(s)	1114
PspPI	GGNCC	5 cut(s)	907, 1080, 1114, 1115, 1432
PspPPI	RGGWCCY	1 cut(s)	907
PstI	CTGCAG	1 cut(s)	743
PstNI	CAGNNNCTG	1 cut(s)	910
PvuII	CAGCTG	2 cut(s)	292, 1040
RsaI	GTAC	2 cut(s)	504, 1454
RsaNI	GTAC	2 cut(s)	503, 1453
RseI	CAYNNNNRTG	1 cut(s)	1548
SapI	GCTCTTC	1 cut(s)	132
SaqAI	TTAA	7 cut(s)	359, 390, 441, 564, 927, 1026, 1400
SatI	GCNGC	6 cut(s)	36, 57, 60, 78, 290, 657
Sau3AI	GATC	4 cut(s)	506, 828, 936, 1464
Sau96I	GGNCC	5 cut(s)	907, 1080, 1114, 1115, 1432
SchI	GAGTC	7 cut(s)	343, 350, 361, 483, 807, 828, 1345
ScrFI	CCNGG	2 cut(s)	201, 1125
SduI	GDGCHC	2 cut(s)	766, 1118
SfaNI	GCATC	8 cut(s)	343, 382, 484, 774, 781, 856, 891, 1333
SfcI	CTRYAG	2 cut(s)	739, 1589
SinI	GGWCC	2 cut(s)	907, 1432
SmiMI	CAYNNNNRTG	1 cut(s)	1548
SmlI	CTYRAG	3 cut(s)	129, 338, 1097
SmoI	CTYRAG	3 cut(s)	129, 338, 1097
SpeI	ACTAGT	1 cut(s)	394
SsiI	CCGC	6 cut(s)	56, 59, 75, 126, 253, 407
SspI	AATATT	1 cut(s)	1302
SspMI	CTAG	4 cut(s)	111, 395, 951, 980
StyD4I	CCNGG	2 cut(s)	199, 1123
StyI	CCWWGG	1 cut(s)	110
TaaI	ACNGT	2 cut(s)	967, 1249
TaiI	ACGT	1 cut(s)	489
TaqI	TCGA	4 cut(s)	47, 399, 492, 1191
TatI	WGTACW	1 cut(s)	1452
TauI	GCSGC	2 cut(s)	59, 62
TfiI	GAWTC	4 cut(s)	116, 122, 176, 710
Tru1I	TTAA	7 cut(s)	359, 390, 441, 564, 927, 1026, 1400
Tru9I	TTAA	7 cut(s)	359, 390, 441, 564, 927, 1026, 1400
TscAI	CASTG	3 cut(s)	21, 328, 1252
TseFI	GTSAC	3 cut(s)	16, 475, 1342
TseI	GCWGC	4 cut(s)	35, 77, 289, 656
Tsp45I	GTSAC	3 cut(s)	16, 475, 1342
TspDTI	ATGAA	8 cut(s)	630, 702, 738, 905, 975, 1214, 1433, 1541
TspGWI	ACGGA	2 cut(s)	1027, 1352
TspRI	CASTG	3 cut(s)	21, 328, 1252
VpaK11BI	GGWCC	2 cut(s)	907, 1432
XapI	RAATTY	4 cut(s)	361, 424, 598, 606
XbaI	TCTAGA	1 cut(s)	979
XceI	RCATGY	1 cut(s)	516
XmaJI	CCTAGG	1 cut(s)	110
XmiI	GTMKAC	2 cut(s)	543, 1238
XspI	CTAG	4 cut(s)	111, 395, 951, 980

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.