Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0012282

Physical Location & Seq

Genomic Coordinates Reverse (-)

9292791 .. 9294293

Gene Structure 1503 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1049500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1503 bp

ATGAGTCTTCCCGCGTACACAGCAACCCCAATCCAACTCCCTCAACTTCCCAGACAACCACCGCCGTTTCTCCCACTTCCAAACCCTTCCCAGTCCACCTCCCCTAATCCAAACCAGTACCGGAAGCACTCCGTCTCGCTTGAAAGGACCAAAACCCCCATAGACCCCACTTTTTCATGGACCTCATCAATATCCCACCGCTGCCGAAATGGTCATTTAGCTGAAGCTCTTGCTCACTTCATCCAAATGAGACGAGCTGGAGTCGAACCAAACCACGTCACATTTGTTACCCTTCTCTCTGGCTGCGCCCATTTTCCGGCCAAGGGCGTTCAGTTCGGGCCTTCGCTTCATGCTTATGCCCGGAAGCTCGGATTGGATACAAATAATGTGATGGTAGGCACGGCGGTGATTGATATGTATGCCAAGTGTGGCGGTGTGGATTTTGCTAGGTTGGTTTTTGATGGGCTGGATGTGAAGAATTCAATGTCTTGGAATACTATGATTGATGGGTATATGAAAAATGGGAAGGTTTCGGATGCGGTTGAGCTGTTTGAAAAAATGCCTAACAGAGATGCGGTTTCTTGGACCGTGTTGATTGGTGGGTTTGTCAAGAAAGGTCAGTTCGAGCAAGCGTTGGCGTGGTTTAGAGAGATGCAGCTCGCGGGAGTTGAACCAGACTATGTGACTATAATTGTTGTAATCGCTGCGTGTGCAGATCTGGGAACGCTTGGTCTAGGCTTGTGGCTAAACCATTTTGTTATGAAGCGAGACTTTAAAGACAATGTTAGGATAAGTAACTCATTGGTTGATATGTATTCTCGATGTGGTTGTCTTGGTTTTGCTCGTCAAGTCTTCGAGAACATGCTGGAAAGGGCATTGGTATCATGGAACTCGATGATTGTGGGATTTGCAGTTAATGGGCACGCAGAGGAAGCTCTCGAGTTCTTCAACCTGATGCAGAAGAAAGGGCTCAAGCCAGACAGGGTCAGCTTCACTGGAGCTCTCACCGCGTGCAGCCATGCTGGTTTAGTCGATAAGGGGCTCCATTACTTTGATAACATGAAGGGAGTTCACAGAATAACACCCAGAATCGAGCATTATGGATGCATAGTCGATCTCTATAGCCGTGCAGGGAGGTTGGAAGATGCCTTGGGTGTAATAGAAAACATGTCGATGAAGCCAAATGAAGTTGTGTTGGGTTCTTTGTTGTCCGCTTGTAGAACCATTGGGAACGTCAGTTTAGCTGAAAGATTGATGAAGTACCTCTCTGTGGTTGATCCTGGAGTTGATTCCAACTATGTGCTCCTAGCCAATATATATGCAGCTGCTGGACGGTGGGATGGTGCAAACAAGGTTAGGAAGAAGATGAAGAACCTTGGAGTACAGAAGACACCGGGATTTAGTTCCATTGAGGTTGACTGTAACATTCATGAATTCGTGGCCGGTGATAAATCCCATGTTGACACAGAGTGTATATATTCAACCCTAGGGCTTCTCTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

501

Amino Acids

55.19

Weight (kDa)

8.53

Isoelectric Point (pI)

33.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	57 - 104	9.9e-11	PPR repeat family
PPR_2	PF13041	160 - 190	6.4e-09	PPR repeat family
PPR_1	PF12854	160 - 187	1.3e-07	PPR repeat
PPR	PF01535	163 - 190	3.9e-09	PPR repeat
PPR_2	PF13041	191 - 238	1.7e-11	PPR repeat family
PPR	PF01535	193 - 223	3.4e-07	PPR repeat
PPR_2	PF13041	294 - 339	2.8e-11	PPR repeat family
PPR	PF01535	294 - 324	2.1e-08	PPR repeat
PPR_long	PF17177	308 - 412	1.5e-06	Pentacotripeptide-repeat region of PRORP
E_motif	PF20431	411 - 471	1.9e-16	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012282)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05750 AT1G05750
fragaria_vesca	FvH4_3g26660
malus_domestica	MD00G1049500.v1.1 MD00G1071600.v1.1 MD03G1154500.v1.1
prunus_persica	Prupe.6G143700_v2.0.a1
pyrus_communis	pycom03g10830 pycom11g14680
rosa_chinensis	RchiOBHm_Chr5g0048131 RchiOBHm_Chr5g0048161
rosa_laevigata	RLG00000034500
rosa_multiflora	Rmu_sc0001408.1_g000020
rosa_roxburghii	Rroxscaffold_1G00033760
rosa_rugosa	Rorug05G0236900
rosa_samantha	Rh5AG316000 Rh5BG326400 Rh5CG352900
rosa_wichuraiana	Rw5G029620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	3 cut(s)	14, 662, 1010
AclWI	GGATC	1 cut(s)	1271
AcoI	YGGCCR	2 cut(s)	318, 1440
AcsI	RAATTY	2 cut(s)	478, 1433
AcuI	CTGAAG	1 cut(s)	243
AdeI	CACNNNGTG	2 cut(s)	1011, 1470
AfaI	GTAC	4 cut(s)	17, 119, 1262, 1383
AfiI	CCNNNNNNNGG	3 cut(s)	316, 323, 1270
AflIII	ACRYGT	1 cut(s)	1167
AgsI	TTSAA	6 cut(s)	143, 483, 554, 671, 949, 1482
AjiI	CACGTC	1 cut(s)	277
AjnI	CCWGG	1 cut(s)	1279
AjuI	GAANNNNNNNTTGG	2 cut(s)	356, 388
AleI	CACNNNNGTG	1 cut(s)	404
Alw21I	GWGCWC	2 cut(s)	1003, 1305
Alw26I	GTCTC	3 cut(s)	139, 244, 762
AlwI	GGATC	1 cut(s)	1271
AlwNI	CAGNNNCTG	1 cut(s)	1328
Ama87I	CYCGRG	1 cut(s)	938
AoxI	GGCC	3 cut(s)	318, 338, 1440
ApeKI	GCWGC	7 cut(s)	201, 303, 655, 704, 1014, 1322, 1325
ApoI	RAATTY	2 cut(s)	478, 1433
AspA2I	CCTAGG	1 cut(s)	1486
AspLEI	GCGC	1 cut(s)	308
AspS9I	GGNCC	4 cut(s)	147, 180, 338, 585
AsuC2I	CCSGG	2 cut(s)	361, 1395
AsuHPI	GGTGA	3 cut(s)	418, 997, 1457
AvaI	CYCGRG	1 cut(s)	938
AvaII	GGWCC	3 cut(s)	147, 180, 585
AvrII	CCTAGG	1 cut(s)	1486
BaeGI	GKGCMC	1 cut(s)	924
BanII	GRGCYC	3 cut(s)	972, 1003, 1044
BbsI	GAAGAC	2 cut(s)	844, 1394
Bbv12I	GWGCWC	2 cut(s)	1003, 1305
BbvI	GCAGC	7 cut(s)	188, 290, 667, 691, 1026, 1312, 1334
BccI	CCATC	4 cut(s)	385, 455, 500, 1334
BceAI	ACGGC	3 cut(s)	49, 417, 1110
BciT130I	CCWGG	1 cut(s)	1281
BciVI	GTATCC	1 cut(s)	370
BcnI	CCSGG	2 cut(s)	361, 1395
BcoDI	GTCTC	3 cut(s)	139, 244, 762
BfaI	CTAG	4 cut(s)	447, 734, 1307, 1487
BfmI	CTRYAG	1 cut(s)	1120
BfuI	GTATCC	1 cut(s)	370
BglII	AGATCT	1 cut(s)	715
BisI	GCNGC	7 cut(s)	202, 304, 656, 705, 1015, 1323, 1326
BlnI	CCTAGG	1 cut(s)	1486
BlsI	GCNGC	7 cut(s)	203, 305, 657, 706, 1016, 1324, 1327
Bme1390I	CCNGG	3 cut(s)	361, 1281, 1395
Bme18I	GGWCC	3 cut(s)	147, 180, 585
BmeT110I	CYCGRG	1 cut(s)	938
BmgBI	CACGTC	1 cut(s)	277
BmgT120I	GGNCC	4 cut(s)	147, 180, 338, 585
BmiI	GGNNCC	1 cut(s)	1043
BmrFI	CCNGG	3 cut(s)	361, 1281, 1395
BmrI	ACTGGG	1 cut(s)	85
BmsI	GCATC	6 cut(s)	526, 562, 642, 945, 1094, 1135
BmuI	ACTGGG	1 cut(s)	85
BpiI	GAAGAC	2 cut(s)	844, 1394
BpmI	CTGGAG	3 cut(s)	279, 1017, 1302
BpuEI	CTTGAG	1 cut(s)	956
BpuMI	CCSGG	2 cut(s)	361, 1395
BsaJI	CCNNGG	4 cut(s)	321, 1149, 1375, 1486
BsaWI	WCCGGW	1 cut(s)	120
Bsc4I	CCNNNNNNNGG	3 cut(s)	316, 323, 1270
Bse118I	RCCGGY	1 cut(s)	1442
Bse1I	ACTGG	3 cut(s)	91, 115, 1000
BseBI	CCWGG	1 cut(s)	1281
BseDI	CCNNGG	4 cut(s)	321, 1149, 1375, 1486
BseGI	GGATG	5 cut(s)	240, 475, 541, 1109, 1345
BseLI	CCNNNNNNNGG	3 cut(s)	316, 323, 1270
BseNI	ACTGG	3 cut(s)	91, 115, 1000
BseSI	GKGCMC	1 cut(s)	924
BseXI	GCAGC	7 cut(s)	188, 290, 667, 691, 1026, 1312, 1334
BsgI	GTGCAG	3 cut(s)	732, 1033, 1149
Bsh1236I	CGCG	3 cut(s)	14, 662, 1010
BshFI	GGCC	3 cut(s)	320, 340, 1442
BsiHKAI	GWGCWC	2 cut(s)	1003, 1305
BsiHKCI	CYCGRG	1 cut(s)	938
BsiSI	CCGG	5 cut(s)	121, 317, 361, 1394, 1443
BslI	CCNNNNNNNGG	3 cut(s)	316, 323, 1270
BsmAI	GTCTC	3 cut(s)	139, 244, 762
BsmBI	CGTCTC	2 cut(s)	139, 244
BsnI	GGCC	3 cut(s)	320, 340, 1442
BsoBI	CYCGRG	1 cut(s)	938
Bsp1286I	GDGCHC	5 cut(s)	924, 972, 1003, 1044, 1305
Bsp143I	GATC	3 cut(s)	715, 1114, 1276
BspANI	GGCC	3 cut(s)	320, 340, 1442
BspFNI	CGCG	3 cut(s)	14, 662, 1010
BspHI	TCATGA	1 cut(s)	1429
BspLI	GGNNCC	1 cut(s)	1043
BspPI	GGATC	1 cut(s)	1271
BsrFI	RCCGGY	1 cut(s)	1442
BsrI	ACTGG	3 cut(s)	91, 115, 1000
BssAI	RCCGGY	1 cut(s)	1442
BssECI	CCNNGG	4 cut(s)	321, 1149, 1375, 1486
BssMI	GATC	3 cut(s)	715, 1114, 1276
BssT1I	CCWWGG	4 cut(s)	321, 1149, 1375, 1486
Bst2UI	CCWGG	1 cut(s)	1281
Bst4CI	ACNGT	3 cut(s)	589, 1335, 1421
BstC8I	GCNNGC	4 cut(s)	630, 660, 924, 1012
BstF5I	GGATG	5 cut(s)	240, 475, 541, 1109, 1345
BstFNI	CGCG	3 cut(s)	14, 662, 1010
BstHHI	GCGC	1 cut(s)	308
BstKTI	GATC	3 cut(s)	718, 1117, 1279
BstMAI	GTCTC	3 cut(s)	139, 244, 762
BstMBI	GATC	3 cut(s)	715, 1114, 1276
BstMWI	GCNNNNNNNGC	4 cut(s)	20, 710, 932, 1007
BstNI	CCWGG	1 cut(s)	1281
BstNSI	RCATGY	2 cut(s)	865, 1171
BstSCI	CCNGG	3 cut(s)	359, 1279, 1393
BstSFI	CTRYAG	1 cut(s)	1120
BstSLI	GKGCMC	1 cut(s)	924
BstUI	CGCG	3 cut(s)	14, 662, 1010
BstV1I	GCAGC	7 cut(s)	188, 290, 667, 691, 1026, 1312, 1334
BstV2I	GAAGAC	2 cut(s)	844, 1394
BstX2I	RGATCY	1 cut(s)	715
BstYI	RGATCY	1 cut(s)	715
BsuI	GTATCC	1 cut(s)	370
BsuRI	GGCC	3 cut(s)	320, 340, 1442
BtrI	CACGTC	1 cut(s)	277
BtsCI	GGATG	5 cut(s)	240, 475, 541, 1109, 1345
BtsIMutI	CAGTG	1 cut(s)	993
Cac8I	GCNNGC	4 cut(s)	630, 660, 924, 1012
CaiI	CAGNNNCTG	1 cut(s)	1328
CciI	TCATGA	1 cut(s)	1429
CfoI	GCGC	1 cut(s)	308
Cfr10I	RCCGGY	1 cut(s)	1442
Cfr13I	GGNCC	4 cut(s)	147, 180, 338, 585
Csp6I	GTAC	4 cut(s)	16, 118, 1261, 1382
CviAII	CATG	9 cut(s)	177, 350, 862, 885, 1019, 1060, 1168, 1430, 1457
CviQI	GTAC	4 cut(s)	16, 118, 1261, 1382
DpnI	GATC	3 cut(s)	717, 1116, 1278
DpnII	GATC	3 cut(s)	715, 1114, 1276
DraI	TTTAAA	1 cut(s)	775
DraIII	CACNNNGTG	2 cut(s)	1011, 1470
EaeI	YGGCCR	2 cut(s)	318, 1440
Ecl136II	GAGCTC	1 cut(s)	1001
Eco130I	CCWWGG	4 cut(s)	321, 1149, 1375, 1486
Eco24I	GRGCYC	3 cut(s)	972, 1003, 1044
Eco47I	GGWCC	3 cut(s)	147, 180, 585
Eco53kI	GAGCTC	1 cut(s)	1001
Eco57I	CTGAAG	1 cut(s)	243
Eco88I	CYCGRG	1 cut(s)	938
EcoICRI	GAGCTC	1 cut(s)	1001
EcoRI	GAATTC	2 cut(s)	478, 1433
EcoRII	CCWGG	1 cut(s)	1279
EcoT14I	CCWWGG	4 cut(s)	321, 1149, 1375, 1486
EcoT22I	ATGCAT	1 cut(s)	1109
EcoT38I	GRGCYC	3 cut(s)	972, 1003, 1044
ErhI	CCWWGG	4 cut(s)	321, 1149, 1375, 1486
Esp3I	CGTCTC	2 cut(s)	139, 244
FaeI	CATG	9 cut(s)	180, 353, 865, 888, 1022, 1063, 1171, 1433, 1460
FalI	AAGNNNNNCTT	2 cut(s)	755, 787
FatI	CATG	9 cut(s)	176, 349, 861, 884, 1018, 1059, 1167, 1429, 1456
FauI	CCCGC	2 cut(s)	19, 655
Fnu4HI	GCNGC	7 cut(s)	202, 304, 656, 705, 1015, 1323, 1326
FokI	GGATG	5 cut(s)	227, 482, 548, 1116, 1352
FriOI	GRGCYC	3 cut(s)	972, 1003, 1044
Fsp4HI	GCNGC	7 cut(s)	202, 304, 656, 705, 1015, 1323, 1326
FspBI	CTAG	4 cut(s)	447, 734, 1307, 1487
GlaI	GCGC	1 cut(s)	307
GluI	GCNGC	7 cut(s)	202, 304, 656, 705, 1015, 1323, 1326
GsuI	CTGGAG	3 cut(s)	279, 1017, 1302
HaeIII	GGCC	3 cut(s)	320, 340, 1442
HapII	CCGG	5 cut(s)	121, 317, 361, 1394, 1443
HhaI	GCGC	1 cut(s)	308
Hin1II	CATG	9 cut(s)	180, 353, 865, 888, 1022, 1063, 1171, 1433, 1460
Hin6I	GCGC	1 cut(s)	306
HinP1I	GCGC	1 cut(s)	306
HincII	GTYRAC	2 cut(s)	1417, 1462
HindII	GTYRAC	2 cut(s)	1417, 1462
HinfI	GANTC	4 cut(s)	4, 261, 1089, 1289
HpaII	CCGG	5 cut(s)	121, 317, 361, 1394, 1443
HphI	GGTGA	3 cut(s)	418, 997, 1457
Hpy166II	GTNNAC	5 cut(s)	18, 96, 1072, 1417, 1462
Hpy188I	TCNGA	2 cut(s)	371, 535
Hpy188III	TCNNGA	6 cut(s)	610, 819, 856, 938, 1430, 1500
Hpy8I	GTNNAC	5 cut(s)	18, 96, 1072, 1417, 1462
HpyAV	CCTTC	5 cut(s)	96, 302, 351, 520, 1057
HpyCH4III	ACNGT	3 cut(s)	589, 1335, 1421
HpyCH4IV	ACGT	2 cut(s)	276, 1233
HpyCH4V	TGCA	9 cut(s)	655, 713, 911, 958, 1014, 1107, 1130, 1322, 1346
HpyF10VI	GCNNNNNNNGC	4 cut(s)	20, 710, 932, 1007
HpySE526I	ACGT	2 cut(s)	276, 1233
Hsp92II	CATG	9 cut(s)	180, 353, 865, 888, 1022, 1063, 1171, 1433, 1460
HspAI	GCGC	1 cut(s)	306
Kzo9I	GATC	3 cut(s)	715, 1114, 1276
LmnI	GCTCC	3 cut(s)	998, 1047, 1308
Lsp1109I	GCAGC	7 cut(s)	188, 290, 667, 691, 1026, 1312, 1334
LweI	GCATC	6 cut(s)	526, 562, 642, 945, 1094, 1135
MaeI	CTAG	4 cut(s)	447, 734, 1307, 1487
MaeII	ACGT	2 cut(s)	276, 1233
MaeIII	GTNAC	5 cut(s)	277, 286, 682, 794, 1421
MalI	GATC	3 cut(s)	717, 1116, 1278
MboI	GATC	3 cut(s)	715, 1114, 1276
MboII	GAAGA	9 cut(s)	487, 844, 937, 973, 1154, 1372, 1375, 1381, 1399
MflI	RGATCY	1 cut(s)	715
MhlI	GDGCHC	5 cut(s)	924, 972, 1003, 1044, 1305
MluCI	AATT	3 cut(s)	478, 690, 1433
MlyI	GAGTC	2 cut(s)	13, 270
MmeI	TCCRAC	3 cut(s)	58, 1119, 1317
MnlI	CCTC	7 cut(s)	51, 109, 193, 922, 1128, 1274, 1405
Mph1103I	ATGCAT	1 cut(s)	1109
MseI	TTAA	2 cut(s)	774, 915
MslI	CAYNNNNRTG	4 cut(s)	245, 354, 404, 1172
MspA1I	CMGCKG	2 cut(s)	201, 1325
MspI	CCGG	5 cut(s)	121, 317, 361, 1394, 1443
MspR9I	CCNGG	3 cut(s)	361, 1281, 1395
MvaI	CCWGG	1 cut(s)	1281
MvnI	CGCG	3 cut(s)	14, 662, 1010
MwoI	GCNNNNNNNGC	4 cut(s)	20, 710, 932, 1007
NciI	CCSGG	2 cut(s)	361, 1395
NdeII	GATC	3 cut(s)	715, 1114, 1276
NlaIII	CATG	9 cut(s)	180, 353, 865, 888, 1022, 1063, 1171, 1433, 1460
NlaIV	GGNNCC	1 cut(s)	1043
NmuCI	GTSAC	2 cut(s)	277, 682
NsiI	ATGCAT	1 cut(s)	1109
NspI	RCATGY	2 cut(s)	865, 1171
OliI	CACNNNNGTG	1 cut(s)	404
PaeR7I	CTCGAG	1 cut(s)	938
PagI	TCATGA	1 cut(s)	1429
PciI	ACATGT	1 cut(s)	1167
PfeI	GAWTC	2 cut(s)	1089, 1289
PflFI	GACNNNGTC	1 cut(s)	983
PfoI	TCCNGGA	1 cut(s)	1279
PkrI	GCNGC	7 cut(s)	203, 305, 657, 706, 1016, 1324, 1327
PleI	GAGTC	2 cut(s)	12, 269
PpsI	GAGTC	2 cut(s)	12, 269
PscI	ACATGT	1 cut(s)	1167
Psp124BI	GAGCTC	1 cut(s)	1003
Psp6I	CCWGG	1 cut(s)	1279
PspGI	CCWGG	1 cut(s)	1279
PspN4I	GGNNCC	1 cut(s)	1043
PspPI	GGNCC	4 cut(s)	147, 180, 338, 585
PstNI	CAGNNNCTG	1 cut(s)	1328
PsuI	RGATCY	1 cut(s)	715
PsyI	GACNNNGTC	1 cut(s)	983
PvuII	CAGCTG	1 cut(s)	1325
RsaI	GTAC	4 cut(s)	17, 119, 1262, 1383
RsaNI	GTAC	4 cut(s)	16, 118, 1261, 1382
RseI	CAYNNNNRTG	4 cut(s)	245, 354, 404, 1172
SacI	GAGCTC	1 cut(s)	1003
SaqAI	TTAA	2 cut(s)	774, 915
SatI	GCNGC	7 cut(s)	202, 304, 656, 705, 1015, 1323, 1326
Sau3AI	GATC	3 cut(s)	715, 1114, 1276
Sau96I	GGNCC	4 cut(s)	147, 180, 338, 585
SchI	GAGTC	2 cut(s)	13, 270
ScrFI	CCNGG	3 cut(s)	361, 1281, 1395
SduI	GDGCHC	5 cut(s)	924, 972, 1003, 1044, 1305
SfaNI	GCATC	6 cut(s)	526, 562, 642, 945, 1094, 1135
SfcI	CTRYAG	1 cut(s)	1120
Sfr274I	CTCGAG	1 cut(s)	938
SinI	GGWCC	3 cut(s)	147, 180, 585
SlaI	CTCGAG	1 cut(s)	938
SmiMI	CAYNNNNRTG	4 cut(s)	245, 354, 404, 1172
SmlI	CTYRAG	2 cut(s)	938, 971
SmoI	CTYRAG	2 cut(s)	938, 971
Sse9I	AATT	3 cut(s)	478, 690, 1433
SspMI	CTAG	4 cut(s)	447, 734, 1307, 1487
SstI	GAGCTC	1 cut(s)	1003
StyD4I	CCNGG	3 cut(s)	359, 1279, 1393
StyI	CCWWGG	4 cut(s)	321, 1149, 1375, 1486
TaaI	ACNGT	3 cut(s)	589, 1335, 1421
TaiI	ACGT	2 cut(s)	279, 1236
TasI	AATT	3 cut(s)	478, 690, 1433
TatI	WGTACW	1 cut(s)	1381
TfiI	GAWTC	2 cut(s)	1089, 1289
Tru1I	TTAA	2 cut(s)	774, 915
Tru9I	TTAA	2 cut(s)	774, 915
TscAI	CASTG	1 cut(s)	1000
TseFI	GTSAC	2 cut(s)	277, 682
TseI	GCWGC	7 cut(s)	201, 303, 655, 704, 1014, 1322, 1325
Tsp45I	GTSAC	2 cut(s)	277, 682
TspGWI	ACGGA	1 cut(s)	121
TspRI	CASTG	1 cut(s)	1000
Tth111I	GACNNNGTC	1 cut(s)	983
VpaK11BI	GGWCC	3 cut(s)	147, 180, 585
XapI	RAATTY	2 cut(s)	478, 1433
XceI	RCATGY	2 cut(s)	865, 1171
XhoI	CTCGAG	1 cut(s)	938
XmaJI	CCTAGG	1 cut(s)	1486
XspI	CTAG	4 cut(s)	447, 734, 1307, 1487
Zsp2I	ATGCAT	1 cut(s)	1109

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.