Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0012282

Physical Location & Seq

Genomic Coordinates Reverse (-)

45850478 .. 45852309

Gene Structure 1832 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G029620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

ATGATTCTCCCCGCCTGCACGGCAACCCCAATTCAACTTCCCAAACAACACCCACTCACCACTACTCCACACCCATCTCAGTCCACCTCTTCCAATCCAAAACATGACAAAAAACACTCGGTTTCGCTGAAAAACAGGAATGAACACATGGACCAAACTGTGTTATGGACCTCTTCTATATCCCAACGCTGCCGAAGTGGTCAGCTGTCTCAAGCTGTTTCACAGTTCATCCAAATGAGACAAGCCGGGGTTGAACCAAACCACATCACGCTCGTTACACTCTTCTCCGGCTGTGCTCACTTTCCAGCTAAAGCACCATTGTTTGGGCCCTCGCTTCATGCTTTTGCGTCTAAACTGGGCTTAGATAGGACTAATGTGATGGTGGGGACGGCACTAGTTGATATGTATGCAAAGTCTGGTCGGGTGGAGCTTGCTAGATTGGTTTTTGGTGGGATGGAGGTGAAGAATTCAATGTCTTGGAATACTATGATTGATGGGTACATGAGAAATGGAAATGTGAGGGATGCAGTTGTGGTGTTTGATGAAATGCCTGAGAGAGATGCTGTTTCGTGGACCGCTTTGATTGGTGGGTTTGTGAAGAGACGCCGGTTTGAGCAAGCGCTGGAGTGGTTTCGTGAGATGCAGGTGTCCCGTGTGGAACCGGACTATGTGACTATAATTGCTGTGATTGCTGCTTGTGCTGATTTGGGGACTCTTGGTTTAGGCTTGTGGATAAACCGGTTTGTTATGAAGCAAGACTTTAGACACAATGTTCGGATAAGTAACTCGTTGATTGATATGTATTCTCGATGTGGATGTATTGATTTTGCTAGGCAAGTGTTTGACAACATGCCTGATCGGACCTTGGTTTCTTGGAACTCGATGATTGTGGGTTTTGCGGTGAATGGGCATGCAGAGGAAGCTCTTGTGTTCTTTAACCTGATGCAGAAGGAAGGGTTCAAGCCGGACGGTGTCAGCTTCACTGGGGCTCTTACTGCATGCAGCCATGCTGGTTTAGCCGATGAGGGGCTACGTTTCTTTGATAACATGAAGAGAATACACAAAATAACCCCGAGAATTGAGCATTACGGCTGCATAGTTGATCTCTATAGCCGTGCAGGGAGGCTGGAAGATGCCTTGAATGTAATAGAGAACATGCCGATGAAGCCAAATGAAGTTGTTTTGGGTTCTTTGCTAGCAGCTTGTAGAACTAGTGGAAATATCAACTTAGCCGAAAGACTGATGAAGTACCTGTTCGAGTTGGATCCTGGTGTTGATTCGAATTATGTGCTCCTTGCCAACATATATGCAGCAGATGGTAGGTGGGATGGTGCAAACAAGGTTAGAAAAACTATGAAAGACCTCGGAATCCAGAAGGTGCCAGGATTTAGTTCGGTTGAGATTGACTGTGATATTCATGAATTTGTGGCCGGTGATAAATCCCATGTTGATGCAGAGTATATATATTCAACACTAGAGCTTCTATCTTTTGAGCTCAAATTATGTGGGTATGTTCCTGAACACATTATAAGGGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

512

Amino Acids

57.27

Weight (kDa)

6.76

Isoelectric Point (pI)

40.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	53 - 100	2.8e-08	PPR repeat family
PPR_2	PF13041	156 - 186	2.4e-08	PPR repeat family
PPR_1	PF12854	156 - 183	2.4e-07	PPR repeat
PPR	PF01535	159 - 186	1.5e-08	PPR repeat
PPR_2	PF13041	187 - 234	4.4e-10	PPR repeat family
PPR	PF01535	189 - 217	1.1e-06	PPR repeat
PPR_2	PF13041	289 - 335	5.7e-10	PPR repeat family
PPR	PF01535	290 - 320	3e-07	PPR repeat
PPR_long	PF17177	305 - 409	7.2e-06	Pentacotripeptide-repeat region of PRORP
E_motif	PF20431	407 - 467	3e-17	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012282)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05750 AT1G05750
fragaria_vesca	FvH4_3g26660
malus_domestica	MD00G1049500.v1.1 MD00G1071600.v1.1 MD03G1154500.v1.1
prunus_persica	Prupe.6G143700_v2.0.a1
pyrus_communis	pycom03g10830 pycom11g14680
rosa_chinensis	RchiOBHm_Chr5g0048131 RchiOBHm_Chr5g0048161
rosa_laevigata	RLG00000034500
rosa_multiflora	Rmu_sc0001408.1_g000020
rosa_roxburghii	Rroxscaffold_1G00033760
rosa_rugosa	Rorug05G0236900
rosa_samantha	Rh5AG316000 Rh5BG326400 Rh5CG352900
rosa_wichuraiana	Rw5G029620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1529
AarI	CACCTGC	1 cut(s)	634
Acc36I	ACCTGC	1 cut(s)	634
AccB1I	GGYRCC	1 cut(s)	1378
AccB7I	CCANNNNNTGG	1 cut(s)	323
AciI	CCGC	3 cut(s)	12, 576, 899
AclWI	GGATC	2 cut(s)	1259, 1272
AcoI	YGGCCR	1 cut(s)	1428
AcsI	RAATTY	2 cut(s)	466, 1421
AcyI	GRCGYC	1 cut(s)	604
AfaI	GTAC	2 cut(s)	500, 1250
AfeI	AGCGCT	1 cut(s)	621
AfiI	CCNNNNNNNGG	2 cut(s)	323, 1026
AgeI	ACCGGT	1 cut(s)	738
AgsI	TTSAA	6 cut(s)	35, 254, 471, 961, 1141, 1470
AhlI	ACTAGT	2 cut(s)	394, 1211
AjnI	CCWGG	2 cut(s)	1267, 1381
AluBI	AGCT	9 cut(s)	205, 215, 308, 430, 923, 978, 1202, 1480, 1495
AluI	AGCT	9 cut(s)	205, 215, 308, 430, 923, 978, 1202, 1480, 1495
Alw21I	GWGCWC	3 cut(s)	298, 1293, 1497
Alw26I	GTCTC	3 cut(s)	213, 232, 595
AlwI	GGATC	2 cut(s)	1259, 1272
Ama87I	CYCGRG	1 cut(s)	1072
Aor51HI	AGCGCT	1 cut(s)	621
AoxI	GGCC	2 cut(s)	326, 1428
ApaI	GGGCCC	1 cut(s)	330
ApeKI	GCWGC	6 cut(s)	189, 692, 1002, 1092, 1199, 1310
ApoI	RAATTY	2 cut(s)	466, 1421
ArsI	GACNNNNNNTTYG	2 cut(s)	756, 788
AsiGI	ACCGGT	1 cut(s)	738
AspLEI	GCGC	1 cut(s)	622
AspS9I	GGNCC	6 cut(s)	151, 168, 326, 327, 573, 861
AsuC2I	CCSGG	1 cut(s)	247
AsuHPI	GGTGA	4 cut(s)	49, 472, 913, 1445
AsuII	TTCGAA	1 cut(s)	1280
AsuNHI	GCTAGC	1 cut(s)	1195
AvaI	CYCGRG	1 cut(s)	1072
AvaII	GGWCC	4 cut(s)	151, 168, 573, 861
BaeGI	GKGCMC	1 cut(s)	330
BamHI	GGATCC	1 cut(s)	1264
BanI	GGYRCC	1 cut(s)	1378
BanII	GRGCYC	3 cut(s)	330, 991, 1497
Bbv12I	GWGCWC	3 cut(s)	298, 1293, 1497
BbvI	GCAGC	6 cut(s)	176, 679, 1014, 1079, 1211, 1322
BccI	CCATC	6 cut(s)	82, 373, 448, 488, 1310, 1322
BceAI	ACGGC	4 cut(s)	36, 405, 1098, 1105
BcgI	CGANNNNNNTGC	2 cut(s)	1270, 1304
BciT130I	CCWGG	2 cut(s)	1269, 1383
BcnI	CCSGG	1 cut(s)	247
BcoDI	GTCTC	3 cut(s)	213, 232, 595
BcuI	ACTAGT	2 cut(s)	394, 1211
BfaI	CTAG	6 cut(s)	395, 435, 831, 1196, 1212, 1475
BfmI	CTRYAG	1 cut(s)	1108
BfoI	RGCGCY	1 cut(s)	623
BfuAI	ACCTGC	1 cut(s)	634
BglI	GCCNNNNNGGC	1 cut(s)	20
BisI	GCNGC	6 cut(s)	190, 693, 1003, 1093, 1200, 1311
BlsI	GCNGC	6 cut(s)	191, 694, 1004, 1094, 1201, 1312
Bme1390I	CCNGG	3 cut(s)	247, 1269, 1383
Bme18I	GGWCC	4 cut(s)	151, 168, 573, 861
BmeT110I	CYCGRG	1 cut(s)	1072
BmgT120I	GGNCC	6 cut(s)	151, 168, 326, 327, 573, 861
BmiI	GGNNCC	4 cut(s)	328, 660, 1266, 1380
BmrFI	CCNGG	3 cut(s)	247, 1269, 1383
BmrI	ACTGGG	2 cut(s)	365, 993
BmsI	GCATC	6 cut(s)	514, 550, 630, 933, 1123, 1441
BmtI	GCTAGC	1 cut(s)	1199
BmuI	ACTGGG	2 cut(s)	365, 993
BpmI	CTGGAG	1 cut(s)	644
Bpu14I	TTCGAA	1 cut(s)	1280
BpuEI	CTTGAG	1 cut(s)	195
BpuMI	CCSGG	1 cut(s)	247
BsaHI	GRCGYC	1 cut(s)	604
BsaJI	CCNNGG	3 cut(s)	246, 864, 1363
BsaWI	WCCGGW	2 cut(s)	661, 738
BsaXI	ACNNNNNCTCC	2 cut(s)	49, 79
Bsc4I	CCNNNNNNNGG	2 cut(s)	323, 1026
Bse118I	RCCGGY	3 cut(s)	606, 738, 1430
Bse1I	ACTGG	2 cut(s)	360, 988
BseBI	CCWGG	2 cut(s)	1269, 1383
BseDI	CCNNGG	3 cut(s)	246, 864, 1363
BseGI	GGATG	5 cut(s)	228, 459, 529, 821, 1333
BseLI	CCNNNNNNNGG	2 cut(s)	323, 1026
BseMII	CTCAG	2 cut(s)	92, 543
BseNI	ACTGG	2 cut(s)	360, 988
BseSI	GKGCMC	1 cut(s)	330
BseXI	GCAGC	6 cut(s)	176, 679, 1014, 1079, 1211, 1322
BsgI	GTGCAG	1 cut(s)	1137
BshFI	GGCC	2 cut(s)	328, 1430
BshNI	GGYRCC	1 cut(s)	1378
BshTI	ACCGGT	1 cut(s)	738
BsiHKAI	GWGCWC	3 cut(s)	298, 1293, 1497
BsiHKCI	CYCGRG	1 cut(s)	1072
BsiSI	CCGG	7 cut(s)	246, 288, 607, 662, 739, 965, 1431
BslFI	GGGAC	3 cut(s)	400, 634, 724
BslI	CCNNNNNNNGG	2 cut(s)	323, 1026
BsmAI	GTCTC	3 cut(s)	213, 232, 595
BsmBI	CGTCTC	1 cut(s)	595
BsmFI	GGGAC	3 cut(s)	400, 634, 724
BsnI	GGCC	2 cut(s)	328, 1430
BsoBI	CYCGRG	1 cut(s)	1072
Bsp119I	TTCGAA	1 cut(s)	1280
Bsp120I	GGGCCC	1 cut(s)	326
Bsp1286I	GDGCHC	5 cut(s)	298, 330, 991, 1293, 1497
Bsp143I	GATC	3 cut(s)	856, 1102, 1264
BspACI	CCGC	3 cut(s)	12, 576, 899
BspANI	GGCC	2 cut(s)	328, 1430
BspCNI	CTCAG	2 cut(s)	91, 544
BspHI	TCATGA	1 cut(s)	1417
BspLI	GGNNCC	4 cut(s)	328, 660, 1266, 1380
BspMI	ACCTGC	1 cut(s)	634
BspOI	GCTAGC	1 cut(s)	1199
BspPI	GGATC	2 cut(s)	1259, 1272
BspT104I	TTCGAA	1 cut(s)	1280
BspT107I	GGYRCC	1 cut(s)	1378
BsrFI	RCCGGY	3 cut(s)	606, 738, 1430
BsrI	ACTGG	2 cut(s)	360, 988
BssAI	RCCGGY	3 cut(s)	606, 738, 1430
BssECI	CCNNGG	3 cut(s)	246, 864, 1363
BssMI	GATC	3 cut(s)	856, 1102, 1264
BssNI	GRCGYC	1 cut(s)	604
BssT1I	CCWWGG	1 cut(s)	864
Bst2UI	CCWGG	2 cut(s)	1269, 1383
Bst4CI	ACNGT	4 cut(s)	160, 225, 971, 1409
Bst6I	CTCTTC	5 cut(s)	94, 178, 287, 593, 1046
BstACI	GRCGYC	1 cut(s)	604
BstBI	TTCGAA	1 cut(s)	1280
BstC8I	GCNNGC	6 cut(s)	16, 432, 618, 912, 1000, 1197
BstDEI	CTNAG	4 cut(s)	78, 361, 552, 1228
BstF5I	GGATG	5 cut(s)	228, 459, 529, 821, 1333
BstH2I	RGCGCY	1 cut(s)	623
BstHHI	GCGC	1 cut(s)	622
BstKTI	GATC	3 cut(s)	859, 1105, 1267
BstMAI	GTCTC	3 cut(s)	213, 232, 595
BstMBI	GATC	3 cut(s)	856, 1102, 1264
BstMWI	GCNNNNNNNGC	7 cut(s)	20, 689, 698, 920, 995, 1016, 1165
BstNI	CCWGG	2 cut(s)	1269, 1383
BstNSI	RCATGY	4 cut(s)	853, 914, 1002, 1159
BstSCI	CCNGG	3 cut(s)	245, 1267, 1381
BstSFI	CTRYAG	1 cut(s)	1108
BstSLI	GKGCMC	1 cut(s)	330
BstV1I	GCAGC	6 cut(s)	176, 679, 1014, 1079, 1211, 1322
BstX2I	RGATCY	1 cut(s)	1264
BstYI	RGATCY	1 cut(s)	1264
BsuRI	GGCC	2 cut(s)	328, 1430
BtsCI	GGATG	5 cut(s)	228, 459, 529, 821, 1333
BtsIMutI	CAGTG	1 cut(s)	981
BveI	ACCTGC	1 cut(s)	634
Cac8I	GCNNGC	6 cut(s)	16, 432, 618, 912, 1000, 1197
CciI	TCATGA	1 cut(s)	1417
CfoI	GCGC	1 cut(s)	622
Cfr10I	RCCGGY	3 cut(s)	606, 738, 1430
Cfr13I	GGNCC	6 cut(s)	151, 168, 326, 327, 573, 861
CseI	GACGC	2 cut(s)	336, 612
Csp6I	GTAC	2 cut(s)	499, 1249
CspAI	ACCGGT	1 cut(s)	738
CspCI	CAANNNNNGTGG	2 cut(s)	1486, 1521
CviQI	GTAC	2 cut(s)	499, 1249
DdeI	CTNAG	4 cut(s)	78, 361, 552, 1228
DpnI	GATC	3 cut(s)	858, 1104, 1266
DpnII	GATC	3 cut(s)	856, 1102, 1264
EaeI	YGGCCR	1 cut(s)	1428
Eam1104I	CTCTTC	5 cut(s)	94, 178, 287, 593, 1046
EarI	CTCTTC	5 cut(s)	94, 178, 287, 593, 1046
Ecl136II	GAGCTC	1 cut(s)	1495
Eco130I	CCWWGG	1 cut(s)	864
Eco24I	GRGCYC	3 cut(s)	330, 991, 1497
Eco47I	GGWCC	4 cut(s)	151, 168, 573, 861
Eco47III	AGCGCT	1 cut(s)	621
Eco53kI	GAGCTC	1 cut(s)	1495
Eco88I	CYCGRG	1 cut(s)	1072
EcoICRI	GAGCTC	1 cut(s)	1495
EcoO109I	RGGNCCY	1 cut(s)	327
EcoRI	GAATTC	1 cut(s)	466
EcoRII	CCWGG	2 cut(s)	1267, 1381
EcoT14I	CCWWGG	1 cut(s)	864
EcoT38I	GRGCYC	3 cut(s)	330, 991, 1497
ErhI	CCWWGG	1 cut(s)	864
Esp3I	CGTCTC	1 cut(s)	595
FalI	AAGNNNNNCTT	2 cut(s)	743, 775
FaqI	GGGAC	3 cut(s)	400, 634, 724
FauI	CCCGC	1 cut(s)	19
Fnu4HI	GCNGC	6 cut(s)	190, 693, 1003, 1093, 1200, 1311
FokI	GGATG	5 cut(s)	215, 466, 536, 828, 1340
FriOI	GRGCYC	3 cut(s)	330, 991, 1497
Fsp4HI	GCNGC	6 cut(s)	190, 693, 1003, 1093, 1200, 1311
FspBI	CTAG	6 cut(s)	395, 435, 831, 1196, 1212, 1475
GlaI	GCGC	1 cut(s)	621
GluI	GCNGC	6 cut(s)	190, 693, 1003, 1093, 1200, 1311
GsuI	CTGGAG	1 cut(s)	644
HaeII	RGCGCY	1 cut(s)	623
HaeIII	GGCC	2 cut(s)	328, 1430
HapII	CCGG	7 cut(s)	246, 288, 607, 662, 739, 965, 1431
HgaI	GACGC	2 cut(s)	336, 612
HhaI	GCGC	1 cut(s)	622
Hin1I	GRCGYC	1 cut(s)	604
Hin6I	GCGC	1 cut(s)	620
HinP1I	GCGC	1 cut(s)	620
HinfI	GANTC	4 cut(s)	4, 712, 1277, 1368
HpaII	CCGG	7 cut(s)	246, 288, 607, 662, 739, 965, 1431
HphI	GGTGA	4 cut(s)	49, 472, 913, 1445
Hpy166II	GTNNAC	2 cut(s)	84, 573
Hpy188I	TCNGA	3 cut(s)	777, 861, 1367
Hpy188III	TCNNGA	5 cut(s)	635, 807, 1372, 1418, 1517
Hpy8I	GTNNAC	2 cut(s)	84, 573
HpyAV	CCTTC	3 cut(s)	943, 947, 1369
HpyCH4III	ACNGT	4 cut(s)	160, 225, 971, 1409
HpyCH4IV	ACGT	1 cut(s)	1033
HpyF10VI	GCNNNNNNNGC	7 cut(s)	20, 689, 698, 920, 995, 1016, 1165
HpyF3I	CTNAG	4 cut(s)	78, 361, 552, 1228
HpySE526I	ACGT	1 cut(s)	1033
Hsp92I	GRCGYC	1 cut(s)	604
HspAI	GCGC	1 cut(s)	620
Kzo9I	GATC	3 cut(s)	856, 1102, 1264
LmnI	GCTCC	2 cut(s)	427, 1296
Lsp1109I	GCAGC	6 cut(s)	176, 679, 1014, 1079, 1211, 1322
LweI	GCATC	6 cut(s)	514, 550, 630, 933, 1123, 1441
MaeI	CTAG	6 cut(s)	395, 435, 831, 1196, 1212, 1475
MaeII	ACGT	1 cut(s)	1033
MaeIII	GTNAC	3 cut(s)	274, 670, 782
MalI	GATC	3 cut(s)	858, 1104, 1266
MboI	GATC	3 cut(s)	856, 1102, 1264
MboII	GAAGA	7 cut(s)	81, 165, 274, 475, 610, 1063, 1142
MflI	RGATCY	1 cut(s)	1264
MhlI	GDGCHC	5 cut(s)	298, 330, 991, 1293, 1497
MluCI	AATT	7 cut(s)	30, 466, 678, 1077, 1282, 1421, 1499
MlyI	GAGTC	1 cut(s)	706
MmeI	TCCRAC	1 cut(s)	1242
MnlI	CCTC	9 cut(s)	97, 181, 340, 451, 513, 910, 1018, 1116, 1373
MseI	TTAA	1 cut(s)	936
MslI	CAYNNNNRTG	3 cut(s)	233, 1160, 1449
MspA1I	CMGCKG	1 cut(s)	205
MspI	CCGG	7 cut(s)	246, 288, 607, 662, 739, 965, 1431
MspR9I	CCNGG	3 cut(s)	247, 1269, 1383
MvaI	CCWGG	2 cut(s)	1269, 1383
MwoI	GCNNNNNNNGC	7 cut(s)	20, 689, 698, 920, 995, 1016, 1165
NciI	CCSGG	1 cut(s)	247
NdeII	GATC	3 cut(s)	856, 1102, 1264
NheI	GCTAGC	1 cut(s)	1195
NlaIV	GGNNCC	4 cut(s)	328, 660, 1266, 1380
NmuCI	GTSAC	1 cut(s)	670
NspI	RCATGY	4 cut(s)	853, 914, 1002, 1159
NspV	TTCGAA	1 cut(s)	1280
PaeI	GCATGC	2 cut(s)	914, 1002
PagI	TCATGA	1 cut(s)	1417
PaqCI	CACCTGC	1 cut(s)	634
PfeI	GAWTC	3 cut(s)	4, 1277, 1368
PflFI	GACNNNGTC	1 cut(s)	971
PflMI	CCANNNNNTGG	1 cut(s)	323
PinAI	ACCGGT	1 cut(s)	738
PkrI	GCNGC	6 cut(s)	191, 694, 1004, 1094, 1201, 1312
PleI	GAGTC	1 cut(s)	706
PpsI	GAGTC	1 cut(s)	706
PsiI	TTATAA	1 cut(s)	1529
Psp124BI	GAGCTC	1 cut(s)	1497
Psp6I	CCWGG	2 cut(s)	1267, 1381
PspGI	CCWGG	2 cut(s)	1267, 1381
PspN4I	GGNNCC	4 cut(s)	328, 660, 1266, 1380
PspOMI	GGGCCC	1 cut(s)	326
PspPI	GGNCC	6 cut(s)	151, 168, 326, 327, 573, 861
PsuI	RGATCY	1 cut(s)	1264
PsyI	GACNNNGTC	1 cut(s)	971
PvuII	CAGCTG	1 cut(s)	205
RsaI	GTAC	2 cut(s)	500, 1250
RsaNI	GTAC	2 cut(s)	499, 1249
RseI	CAYNNNNRTG	3 cut(s)	233, 1160, 1449
SacI	GAGCTC	1 cut(s)	1497
SaqAI	TTAA	1 cut(s)	936
SatI	GCNGC	6 cut(s)	190, 693, 1003, 1093, 1200, 1311
Sau3AI	GATC	3 cut(s)	856, 1102, 1264
Sau96I	GGNCC	6 cut(s)	151, 168, 326, 327, 573, 861
SchI	GAGTC	1 cut(s)	706
ScrFI	CCNGG	3 cut(s)	247, 1269, 1383
SduI	GDGCHC	5 cut(s)	298, 330, 991, 1293, 1497
SfaNI	GCATC	6 cut(s)	514, 550, 630, 933, 1123, 1441
SfcI	CTRYAG	1 cut(s)	1108
SfuI	TTCGAA	1 cut(s)	1280
SinI	GGWCC	4 cut(s)	151, 168, 573, 861
SmiMI	CAYNNNNRTG	3 cut(s)	233, 1160, 1449
SmlI	CTYRAG	1 cut(s)	210
SmoI	CTYRAG	1 cut(s)	210
SpeI	ACTAGT	2 cut(s)	394, 1211
SphI	GCATGC	2 cut(s)	914, 1002
Sse9I	AATT	7 cut(s)	30, 466, 678, 1077, 1282, 1421, 1499
SsiI	CCGC	3 cut(s)	12, 576, 899
SspMI	CTAG	6 cut(s)	395, 435, 831, 1196, 1212, 1475
SstI	GAGCTC	1 cut(s)	1497
StyD4I	CCNGG	3 cut(s)	245, 1267, 1381
StyI	CCWWGG	1 cut(s)	864
TaaI	ACNGT	4 cut(s)	160, 225, 971, 1409
TaiI	ACGT	1 cut(s)	1036
TaqI	TCGA	4 cut(s)	808, 881, 1257, 1280
TasI	AATT	7 cut(s)	30, 466, 678, 1077, 1282, 1421, 1499
TfiI	GAWTC	3 cut(s)	4, 1277, 1368
Tru1I	TTAA	1 cut(s)	936
Tru9I	TTAA	1 cut(s)	936
TscAI	CASTG	1 cut(s)	988
TseFI	GTSAC	1 cut(s)	670
TseI	GCWGC	6 cut(s)	189, 692, 1002, 1092, 1199, 1310
Tsp45I	GTSAC	1 cut(s)	670
TspRI	CASTG	1 cut(s)	988
Tth111I	GACNNNGTC	1 cut(s)	971
Van91I	CCANNNNNTGG	1 cut(s)	323
VpaK11BI	GGWCC	4 cut(s)	151, 168, 573, 861
XapI	RAATTY	2 cut(s)	466, 1421
XceI	RCATGY	4 cut(s)	853, 914, 1002, 1159
XspI	CTAG	6 cut(s)	395, 435, 831, 1196, 1212, 1475

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.