Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0012282

Physical Location & Seq

Genomic Coordinates Reverse (-)

17713332 .. 17714897

Gene Structure 1566 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1154500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1566 bp

ATGAGCCTCCCCGCGTACACGGCAACCCCAATCCAACTCCCTCAACTTCCCAAACAACCACCACCACTTCTCCCACTTCCGAACCCTTCCCAGCCCACCTCCCCTAATCCAAACCACTACCGGAAGCACTCCGTCGCTCTCGAAAGGACCAAAACCCCCATAGAACCTACTGTTTCATGGACCTCCTCCATATCTCACCGCTGCCGAAATGGTCAATTAGCTGAAGCCGTTGCACTCTTCATCCAGATGAGACAAGCTGGCATTGAACCAAACCACGTCACATTCGTTACGCTTCTCTCCGGCTGTGCTCATTTTCCGGCCAAGGGTGTATTTTTTGGGCCTTCGCTTCATGCTTATGCCCGGAAACTCGGATTGGATATAACTAATGTGATGGTGGGCACGGCGGTGATTGATATGTATGCCAAGTGTGGCGGTGTGGATTCTGCTAGGTTGGTTTTTGATGGGCTGGATGTGAAGAATTCAATGTCTTGGAATACTATGATTGGTGGGTACATGAAAAATGGGAAGGTTTGGGACGCGGTTGACCTGTTTGAGAAAATGCCTAAGAGAGATGCTATTTCCTGGACCGTGCTGATTGGCGGGTTTGTCAAGAAAGGTCAGTTCGAGCAAGCGTTGGAATGGTTTCGAGAGATGCAGCTCGCAGGAGTGGAACCAGATTATGTGACTATAATTGCTGTAATCGCGGCGTGTGCAGATTTGGGAACGCTTGGTCTAGGCTTGTGGATAAATCGTTTTGTTATGAAGCAAGACTTTAAAGACAATGTTAGGATAAATAACTCGTTGGTTGATATGTATTCTCGATGTGGTTGTATTAGTTTTGCTCATCAAGTATTCAAGAGTATACCCAAAAGGACATTGGTATCTTGGAACTCGATGATTGTGGGCTTTGCTGTCAATGGGCATGCAGAGGAAGCTCTCGACTTCTTCAACCTGATGCAGAAGGAAGGGTTCAAGCCAGACGGGGTCAGCTTCACTGGAGCACTCACTGCGTGCAGCCATGCTGGTTTAGTCGATGAGGGGCTCCGTTACTTTGGTAACATGAAGAGAGTTCACAGAATAACACCCAGAATCGAGCATTATGGGTGCATAGTCGATCTCTATAGCCGTGCAGGGAGGTTAGAAGATGCCTTGAGTGTAATAGAAAACATGCCGATGAAGCCAAATGAAGTGGTGTTGGGTTCTTTGTTGGCTGCTTGTAGAACCATTGGGAACATCAGTTTAGCTGAAAGATTAATGAAGTACCTCTATGAGGTTGATCCTAGCGTTGATTCCAACTATGTGCTCCTAGCCAATATATATGCAGCTGTTGGACGGTGGGATGGTGCAAACAAGGTTCGAAAGAAGATGAAAGACCTCAGAGTGCATAAGACACCGGGATTTAGTTCAGTTGAGATTGACTGTAACATTCATGAATTCGTGGCCAGTGATAAGTCCCATGTTGACACAGAGTGTATTTATTCAACCCTAGAGCTTCTCTCCTTCGAGCTCAAATTACGTGGGTATGTTCCGGAAAACTTTGTGACAGAATCGTATGAGTTTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

522

Amino Acids

58.03

Weight (kDa)

7.58

Isoelectric Point (pI)

37.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	57 - 104	1.6e-12	PPR repeat family
PPR_2	PF13041	160 - 190	4.1e-08	PPR repeat family
PPR_1	PF12854	160 - 187	4.3e-06	PPR repeat
PPR	PF01535	163 - 190	2.6e-08	PPR repeat
PPR_2	PF13041	191 - 238	8e-11	PPR repeat family
PPR	PF01535	193 - 223	1.6e-07	PPR repeat
PPR_2	PF13041	293 - 339	1.1e-10	PPR repeat family
PPR	PF01535	294 - 324	4.7e-08	PPR repeat
E_motif	PF20431	411 - 471	9.3e-16	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012282)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05750 AT1G05750
fragaria_vesca	FvH4_3g26660
malus_domestica	MD00G1049500.v1.1 MD00G1071600.v1.1 MD03G1154500.v1.1
prunus_persica	Prupe.6G143700_v2.0.a1
pyrus_communis	pycom03g10830 pycom11g14680
rosa_chinensis	RchiOBHm_Chr5g0048131 RchiOBHm_Chr5g0048161
rosa_laevigata	RLG00000034500
rosa_multiflora	Rmu_sc0001408.1_g000020
rosa_roxburghii	Rroxscaffold_1G00033760
rosa_rugosa	Rorug05G0236900
rosa_samantha	Rh5AG316000 Rh5BG326400 Rh5CG352900
rosa_wichuraiana	Rw5G029620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	862
AccII	CGCG	3 cut(s)	14, 539, 704
AccIII	TCCGGA	1 cut(s)	1528
AciI	CCGC	7 cut(s)	12, 199, 404, 432, 539, 600, 704
AclWI	GGATC	1 cut(s)	1271
AcoI	YGGCCR	2 cut(s)	318, 1440
AcsI	RAATTY	2 cut(s)	478, 1433
AcuI	CTGAAG	1 cut(s)	243
AdeI	CACNNNGTG	2 cut(s)	1011, 1470
AfaI	GTAC	3 cut(s)	17, 512, 1262
AfiI	CCNNNNNNNGG	2 cut(s)	323, 1270
AgsI	TTSAA	6 cut(s)	266, 483, 856, 949, 973, 1482
AjiI	CACGTC	1 cut(s)	277
AjnI	CCWGG	1 cut(s)	581
AjuI	GAANNNNNNNTTGG	2 cut(s)	356, 388
AleI	CACNNNNGTG	1 cut(s)	404
AluBI	AGCT	9 cut(s)	221, 257, 658, 935, 990, 1244, 1325, 1492, 1507
AluI	AGCT	9 cut(s)	221, 257, 658, 935, 990, 1244, 1325, 1492, 1507
Alw21I	GWGCWC	4 cut(s)	310, 1003, 1305, 1509
Alw26I	GTCTC	1 cut(s)	244
AlwI	GGATC	1 cut(s)	1271
Aor13HI	TCCGGA	1 cut(s)	1528
AoxI	GGCC	3 cut(s)	318, 338, 1440
ApeKI	GCWGC	5 cut(s)	201, 655, 1014, 1211, 1322
ApoI	RAATTY	2 cut(s)	478, 1433
AseI	ATTAAT	1 cut(s)	1253
Asp700I	GAANNNNTTC	1 cut(s)	642
AspS9I	GGNCC	4 cut(s)	147, 180, 338, 585
AsuC2I	CCSGG	2 cut(s)	361, 1395
AsuHPI	GGTGA	2 cut(s)	188, 418
AsuII	TTCGAA	1 cut(s)	1357
AvaII	GGWCC	3 cut(s)	147, 180, 585
BaeGI	GKGCMC	1 cut(s)	401
BaeI	ACNNNNGTAYC	2 cut(s)	864, 897
BalI	TGGCCA	1 cut(s)	1442
BanII	GRGCYC	2 cut(s)	1044, 1509
Bbv12I	GWGCWC	4 cut(s)	310, 1003, 1305, 1509
BbvI	GCAGC	5 cut(s)	188, 667, 1026, 1198, 1334
BccI	CCATC	3 cut(s)	385, 455, 1334
BceAI	ACGGC	4 cut(s)	36, 212, 417, 1110
BciT130I	CCWGG	1 cut(s)	583
BcnI	CCSGG	2 cut(s)	361, 1395
BcoDI	GTCTC	1 cut(s)	244
BfaI	CTAG	5 cut(s)	447, 734, 1281, 1307, 1487
BfmI	CTRYAG	1 cut(s)	1120
BisI	GCNGC	6 cut(s)	202, 656, 705, 1015, 1212, 1323
BlsI	GCNGC	6 cut(s)	203, 657, 706, 1016, 1213, 1324
Bme1390I	CCNGG	3 cut(s)	361, 583, 1395
Bme18I	GGWCC	3 cut(s)	147, 180, 585
BmgBI	CACGTC	1 cut(s)	277
BmgT120I	GGNCC	4 cut(s)	147, 180, 338, 585
BmiI	GGNNCC	2 cut(s)	672, 1043
BmrFI	CCNGG	3 cut(s)	361, 583, 1395
BmsI	GCATC	4 cut(s)	562, 642, 945, 1135
BplI	GAGNNNNNCTC	2 cut(s)	1481, 1513
BpmI	CTGGAG	1 cut(s)	1017
Bpu14I	TTCGAA	1 cut(s)	1357
BpuEI	CTTGAG	1 cut(s)	1171
BpuMI	CCSGG	2 cut(s)	361, 1395
BsaAI	YACGTR	1 cut(s)	1517
BsaJI	CCNNGG	1 cut(s)	321
BsaWI	WCCGGW	2 cut(s)	120, 1528
BsaXI	ACNNNNNCTCC	2 cut(s)	54, 84
Bsc4I	CCNNNNNNNGG	2 cut(s)	323, 1270
Bse1I	ACTGG	2 cut(s)	1000, 1443
BseAI	TCCGGA	1 cut(s)	1528
BseBI	CCWGG	1 cut(s)	583
BseDI	CCNNGG	1 cut(s)	321
BseGI	GGATG	3 cut(s)	240, 475, 1345
BseLI	CCNNNNNNNGG	2 cut(s)	323, 1270
BseMII	CTCAG	1 cut(s)	1390
BseNI	ACTGG	2 cut(s)	1000, 1443
BseRI	GAGGAG	1 cut(s)	175
BseSI	GKGCMC	1 cut(s)	401
BseXI	GCAGC	5 cut(s)	188, 667, 1026, 1198, 1334
BseYI	CCCAGC	1 cut(s)	90
BsgI	GTGCAG	3 cut(s)	732, 1033, 1149
Bsh1236I	CGCG	3 cut(s)	14, 539, 704
BshFI	GGCC	3 cut(s)	320, 340, 1442
BsiHKAI	GWGCWC	4 cut(s)	310, 1003, 1305, 1509
BsiSI	CCGG	6 cut(s)	121, 300, 317, 361, 1394, 1529
BslFI	GGGAC	2 cut(s)	548, 1438
BslI	CCNNNNNNNGG	2 cut(s)	323, 1270
BsmAI	GTCTC	1 cut(s)	244
BsmFI	GGGAC	2 cut(s)	548, 1438
BsnI	GGCC	3 cut(s)	320, 340, 1442
Bsp119I	TTCGAA	1 cut(s)	1357
Bsp1286I	GDGCHC	6 cut(s)	310, 401, 1003, 1044, 1305, 1509
Bsp13I	TCCGGA	1 cut(s)	1528
Bsp143I	GATC	2 cut(s)	1114, 1276
BspACI	CCGC	7 cut(s)	12, 199, 404, 432, 539, 600, 704
BspANI	GGCC	3 cut(s)	320, 340, 1442
BspCNI	CTCAG	1 cut(s)	1389
BspEI	TCCGGA	1 cut(s)	1528
BspFNI	CGCG	3 cut(s)	14, 539, 704
BspHI	TCATGA	1 cut(s)	1429
BspLI	GGNNCC	2 cut(s)	672, 1043
BspPI	GGATC	1 cut(s)	1271
BspT104I	TTCGAA	1 cut(s)	1357
BsrI	ACTGG	2 cut(s)	1000, 1443
BssECI	CCNNGG	1 cut(s)	321
BssMI	GATC	2 cut(s)	1114, 1276
BssNAI	GTATAC	1 cut(s)	863
BssT1I	CCWWGG	1 cut(s)	321
Bst1107I	GTATAC	1 cut(s)	863
Bst2UI	CCWGG	1 cut(s)	583
Bst4CI	ACNGT	4 cut(s)	172, 589, 1335, 1421
Bst6I	CTCTTC	2 cut(s)	242, 1058
BstAPI	GCANNNNNTGC	1 cut(s)	1007
BstBAI	YACGTR	1 cut(s)	1517
BstBI	TTCGAA	1 cut(s)	1357
BstC8I	GCNNGC	5 cut(s)	259, 630, 660, 924, 1012
BstDEI	CTNAG	2 cut(s)	564, 1376
BstENI	CCTNNNNNAGG	1 cut(s)	1268
BstF5I	GGATG	3 cut(s)	240, 475, 1345
BstFNI	CGCG	3 cut(s)	14, 539, 704
BstKTI	GATC	2 cut(s)	1117, 1279
BstMAI	GTCTC	1 cut(s)	244
BstMBI	GATC	2 cut(s)	1114, 1276
BstMWI	GCNNNNNNNGC	6 cut(s)	20, 701, 710, 932, 1007, 1177
BstNI	CCWGG	1 cut(s)	583
BstNSI	RCATGY	2 cut(s)	926, 1171
BstSCI	CCNGG	3 cut(s)	359, 581, 1393
BstSFI	CTRYAG	1 cut(s)	1120
BstSLI	GKGCMC	1 cut(s)	401
BstUI	CGCG	3 cut(s)	14, 539, 704
BstV1I	GCAGC	5 cut(s)	188, 667, 1026, 1198, 1334
BstZ17I	GTATAC	1 cut(s)	863
BsuRI	GGCC	3 cut(s)	320, 340, 1442
BtrI	CACGTC	1 cut(s)	277
BtsCI	GGATG	3 cut(s)	240, 475, 1345
BtsI	GCAGTG	1 cut(s)	1005
BtsIMutI	CAGTG	3 cut(s)	993, 1005, 1450
Cac8I	GCNNGC	5 cut(s)	259, 630, 660, 924, 1012
CciI	TCATGA	1 cut(s)	1429
Cfr13I	GGNCC	4 cut(s)	147, 180, 338, 585
CseI	GACGC	1 cut(s)	545
Csp6I	GTAC	3 cut(s)	16, 511, 1261
CspCI	CAANNNNNGTGG	4 cut(s)	1170, 1205, 1498, 1533
CviAII	CATG	9 cut(s)	177, 350, 514, 923, 1019, 1060, 1168, 1430, 1457
CviQI	GTAC	3 cut(s)	16, 511, 1261
DdeI	CTNAG	2 cut(s)	564, 1376
DpnI	GATC	2 cut(s)	1116, 1278
DpnII	GATC	2 cut(s)	1114, 1276
DraI	TTTAAA	1 cut(s)	775
DraIII	CACNNNGTG	2 cut(s)	1011, 1470
EaeI	YGGCCR	2 cut(s)	318, 1440
Eam1104I	CTCTTC	2 cut(s)	242, 1058
EarI	CTCTTC	2 cut(s)	242, 1058
Ecl136II	GAGCTC	1 cut(s)	1507
Eco130I	CCWWGG	1 cut(s)	321
Eco24I	GRGCYC	2 cut(s)	1044, 1509
Eco47I	GGWCC	3 cut(s)	147, 180, 585
Eco53kI	GAGCTC	1 cut(s)	1507
Eco57I	CTGAAG	1 cut(s)	243
EcoICRI	GAGCTC	1 cut(s)	1507
EcoNI	CCTNNNNNAGG	1 cut(s)	1268
EcoRI	GAATTC	2 cut(s)	478, 1433
EcoRII	CCWGG	1 cut(s)	581
EcoT14I	CCWWGG	1 cut(s)	321
EcoT38I	GRGCYC	2 cut(s)	1044, 1509
ErhI	CCWWGG	1 cut(s)	321
FaeI	CATG	9 cut(s)	180, 353, 517, 926, 1022, 1063, 1171, 1433, 1460
FalI	AAGNNNNNCTT	2 cut(s)	755, 787
FaqI	GGGAC	2 cut(s)	548, 1438
FatI	CATG	9 cut(s)	176, 349, 513, 922, 1018, 1059, 1167, 1429, 1456
FauI	CCCGC	2 cut(s)	19, 593
FblI	GTMKAC	1 cut(s)	862
Fnu4HI	GCNGC	6 cut(s)	202, 656, 705, 1015, 1212, 1323
FokI	GGATG	3 cut(s)	227, 482, 1352
FriOI	GRGCYC	2 cut(s)	1044, 1509
Fsp4HI	GCNGC	6 cut(s)	202, 656, 705, 1015, 1212, 1323
FspBI	CTAG	5 cut(s)	447, 734, 1281, 1307, 1487
GluI	GCNGC	6 cut(s)	202, 656, 705, 1015, 1212, 1323
GsaI	CCCAGC	1 cut(s)	94
GsuI	CTGGAG	1 cut(s)	1017
HaeIII	GGCC	3 cut(s)	320, 340, 1442
HapII	CCGG	6 cut(s)	121, 300, 317, 361, 1394, 1529
HgaI	GACGC	1 cut(s)	545
Hin1II	CATG	9 cut(s)	180, 353, 517, 926, 1022, 1063, 1171, 1433, 1460
HincII	GTYRAC	2 cut(s)	544, 1462
HindII	GTYRAC	2 cut(s)	544, 1462
HinfI	GANTC	4 cut(s)	440, 1089, 1289, 1547
HpaII	CCGG	6 cut(s)	121, 300, 317, 361, 1394, 1529
HphI	GGTGA	2 cut(s)	188, 418
Hpy166II	GTNNAC	5 cut(s)	18, 544, 863, 1072, 1462
Hpy188I	TCNGA	3 cut(s)	81, 371, 1379
Hpy188III	TCNNGA	9 cut(s)	140, 244, 610, 647, 819, 856, 938, 1430, 1529
Hpy8I	GTNNAC	5 cut(s)	18, 544, 863, 1072, 1462
Hpy99I	CGWCG	1 cut(s)	137
HpyAV	CCTTC	6 cut(s)	96, 351, 520, 955, 959, 1510
HpyCH4III	ACNGT	4 cut(s)	172, 589, 1335, 1421
HpyCH4IV	ACGT	2 cut(s)	276, 1516
HpyF10VI	GCNNNNNNNGC	6 cut(s)	20, 701, 710, 932, 1007, 1177
HpyF3I	CTNAG	2 cut(s)	564, 1376
HpySE526I	ACGT	2 cut(s)	276, 1516
Hsp92II	CATG	9 cut(s)	180, 353, 517, 926, 1022, 1063, 1171, 1433, 1460
Kpn2I	TCCGGA	1 cut(s)	1528
Kzo9I	GATC	2 cut(s)	1114, 1276
LmnI	GCTCC	3 cut(s)	998, 1047, 1308
Lsp1109I	GCAGC	5 cut(s)	188, 667, 1026, 1198, 1334
LweI	GCATC	4 cut(s)	562, 642, 945, 1135
MaeI	CTAG	5 cut(s)	447, 734, 1281, 1307, 1487
MaeII	ACGT	2 cut(s)	276, 1516
MaeIII	GTNAC	7 cut(s)	277, 286, 682, 1046, 1055, 1421, 1540
MalI	GATC	2 cut(s)	1116, 1278
MboI	GATC	2 cut(s)	1114, 1276
MboII	GAAGA	6 cut(s)	229, 487, 937, 1075, 1154, 1375
MhlI	GDGCHC	6 cut(s)	310, 401, 1003, 1044, 1305, 1509
MlsI	TGGCCA	1 cut(s)	1442
MluCI	AATT	5 cut(s)	215, 478, 690, 1433, 1511
MluNI	TGGCCA	1 cut(s)	1442
MmeI	TCCRAC	4 cut(s)	58, 615, 1309, 1317
Mox20I	TGGCCA	1 cut(s)	1442
MroI	TCCGGA	1 cut(s)	1528
MroXI	GAANNNNTTC	1 cut(s)	642
MscI	TGGCCA	1 cut(s)	1442
MseI	TTAA	2 cut(s)	774, 1253
MslI	CAYNNNNRTG	4 cut(s)	245, 354, 404, 1172
Msp20I	TGGCCA	1 cut(s)	1442
MspA1I	CMGCKG	2 cut(s)	201, 1325
MspI	CCGG	6 cut(s)	121, 300, 317, 361, 1394, 1529
MspR9I	CCNGG	3 cut(s)	361, 583, 1395
MvaI	CCWGG	1 cut(s)	583
MvnI	CGCG	3 cut(s)	14, 539, 704
MwoI	GCNNNNNNNGC	6 cut(s)	20, 701, 710, 932, 1007, 1177
NciI	CCSGG	2 cut(s)	361, 1395
NdeII	GATC	2 cut(s)	1114, 1276
NlaIII	CATG	9 cut(s)	180, 353, 517, 926, 1022, 1063, 1171, 1433, 1460
NlaIV	GGNNCC	2 cut(s)	672, 1043
NmuCI	GTSAC	3 cut(s)	277, 682, 1540
NspI	RCATGY	2 cut(s)	926, 1171
NspV	TTCGAA	1 cut(s)	1357
OliI	CACNNNNGTG	1 cut(s)	404
PaeI	GCATGC	1 cut(s)	926
PagI	TCATGA	1 cut(s)	1429
PcsI	WCGNNNNNNNCGW	1 cut(s)	282
PdmI	GAANNNNTTC	1 cut(s)	642
PfeI	GAWTC	4 cut(s)	440, 1089, 1289, 1547
PflFI	GACNNNGTC	1 cut(s)	983
PfoI	TCCNGGA	1 cut(s)	581
PkrI	GCNGC	6 cut(s)	203, 657, 706, 1016, 1213, 1324
Ppu21I	YACGTR	1 cut(s)	1517
PshBI	ATTAAT	1 cut(s)	1253
Psp124BI	GAGCTC	1 cut(s)	1509
Psp6I	CCWGG	1 cut(s)	581
PspFI	CCCAGC	1 cut(s)	90
PspGI	CCWGG	1 cut(s)	581
PspN4I	GGNNCC	2 cut(s)	672, 1043
PspPI	GGNCC	4 cut(s)	147, 180, 338, 585
PsyI	GACNNNGTC	1 cut(s)	983
PvuII	CAGCTG	1 cut(s)	1325
RsaI	GTAC	3 cut(s)	17, 512, 1262
RsaNI	GTAC	3 cut(s)	16, 511, 1261
RseI	CAYNNNNRTG	4 cut(s)	245, 354, 404, 1172
SacI	GAGCTC	1 cut(s)	1509
SaqAI	TTAA	2 cut(s)	774, 1253
SatI	GCNGC	6 cut(s)	202, 656, 705, 1015, 1212, 1323
Sau3AI	GATC	2 cut(s)	1114, 1276
Sau96I	GGNCC	4 cut(s)	147, 180, 338, 585
ScrFI	CCNGG	3 cut(s)	361, 583, 1395
SduI	GDGCHC	6 cut(s)	310, 401, 1003, 1044, 1305, 1509
SfaNI	GCATC	4 cut(s)	562, 642, 945, 1135
SfcI	CTRYAG	1 cut(s)	1120
SfuI	TTCGAA	1 cut(s)	1357
SinI	GGWCC	3 cut(s)	147, 180, 585
SmiMI	CAYNNNNRTG	4 cut(s)	245, 354, 404, 1172
SmlI	CTYRAG	1 cut(s)	1150
SmoI	CTYRAG	1 cut(s)	1150
SphI	GCATGC	1 cut(s)	926
Sse9I	AATT	5 cut(s)	215, 478, 690, 1433, 1511
SsiI	CCGC	7 cut(s)	12, 199, 404, 432, 539, 600, 704
SspMI	CTAG	5 cut(s)	447, 734, 1281, 1307, 1487
SstI	GAGCTC	1 cut(s)	1509
StyD4I	CCNGG	3 cut(s)	359, 581, 1393
StyI	CCWWGG	1 cut(s)	321
TaaI	ACNGT	4 cut(s)	172, 589, 1335, 1421
TaiI	ACGT	2 cut(s)	279, 1519
TasI	AATT	5 cut(s)	215, 478, 690, 1433, 1511
TauI	GCSGC	1 cut(s)	707
TfiI	GAWTC	4 cut(s)	440, 1089, 1289, 1547
Tru1I	TTAA	2 cut(s)	774, 1253
Tru9I	TTAA	2 cut(s)	774, 1253
TscAI	CASTG	3 cut(s)	1000, 1012, 1450
TseFI	GTSAC	3 cut(s)	277, 682, 1540
TseI	GCWGC	5 cut(s)	201, 655, 1014, 1211, 1322
Tsp45I	GTSAC	3 cut(s)	277, 682, 1540
TspGWI	ACGGA	2 cut(s)	121, 1034
TspRI	CASTG	3 cut(s)	1000, 1012, 1450
Tth111I	GACNNNGTC	1 cut(s)	983
VpaK11BI	GGWCC	3 cut(s)	147, 180, 585
VspI	ATTAAT	1 cut(s)	1253
XagI	CCTNNNNNAGG	1 cut(s)	1268
XapI	RAATTY	2 cut(s)	478, 1433
XceI	RCATGY	2 cut(s)	926, 1171
XcmI	CCANNNNNNNNNTGG	1 cut(s)	874
XmiI	GTMKAC	1 cut(s)	862
XmnI	GAANNNNTTC	1 cut(s)	642
XspI	CTAG	5 cut(s)	447, 734, 1281, 1307, 1487

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.