One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATCG00680 |
| malus_domestica | MD00G1121600.v1.1 |
| prunus_persica | Prupe.7G029800_v2.0.a1 |
| pyrus_communis | pycom05g10070 |
| rosa_chinensis | RchiOBHm_Chr6g0260471 RchiOBHm_CPg0501971 |
| rosa_laevigata | RLG00000000054 RLG00000000070 RLG00000000176 RLG00000000220 RLG00000000266 RLG00000033771 RLG00000037104 |
| rosa_multiflora | Rmu_sc0001010.1_g000065 Rmu_sc0004517.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00107490 Rroxscaffold_2G00119020 Rroxscaffold_2G00119180 Rroxscaffold_3G00233680 |
| rosa_rugosa | RorugMtG0002600 |
| rosa_samantha | Rh2CG305200 Rh2DG341500 Rh7AG405500 Rh7CG423100 |
| rosa_wichuraiana | Rw7G013590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 344 |
| AciI | CCGC | 1 cut(s) | 344 |
| AcsI | RAATTY | 2 cut(s) | 47, 273 |
| AfaI | GTAC | 3 cut(s) | 9, 162, 433 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 182, 264 |
| AflII | CTTAAG | 1 cut(s) | 34 |
| AgsI | TTSAA | 1 cut(s) | 242 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 360, 392 |
| AluBI | AGCT | 1 cut(s) | 263 |
| AluI | AGCT | 1 cut(s) | 263 |
| Alw26I | GTCTC | 1 cut(s) | 478 |
| ApoI | RAATTY | 2 cut(s) | 47, 273 |
| AspLEI | GCGC | 1 cut(s) | 420 |
| BanII | GRGCYC | 1 cut(s) | 350 |
| BccI | CCATC | 1 cut(s) | 359 |
| BciVI | GTATCC | 1 cut(s) | 188 |
| BcoDI | GTCTC | 1 cut(s) | 478 |
| BfaI | CTAG | 3 cut(s) | 264, 287, 465 |
| BfrI | CTTAAG | 1 cut(s) | 34 |
| BfuI | GTATCC | 1 cut(s) | 188 |
| BglII | AGATCT | 1 cut(s) | 38 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 182, 264 |
| Bse1I | ACTGG | 1 cut(s) | 157 |
| BseGI | GGATG | 1 cut(s) | 370 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 182, 264 |
| BseNI | ACTGG | 1 cut(s) | 157 |
| BseYI | CCCAGC | 1 cut(s) | 230 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 182, 264 |
| BsmAI | GTCTC | 1 cut(s) | 478 |
| Bsp1286I | GDGCHC | 1 cut(s) | 350 |
| Bsp1407I | TGTACA | 1 cut(s) | 7 |
| Bsp143I | GATC | 1 cut(s) | 38 |
| BspACI | CCGC | 1 cut(s) | 344 |
| BspTI | CTTAAG | 1 cut(s) | 34 |
| BsrBI | CCGCTC | 1 cut(s) | 344 |
| BsrGI | TGTACA | 1 cut(s) | 7 |
| BsrI | ACTGG | 1 cut(s) | 157 |
| BssMI | GATC | 1 cut(s) | 38 |
| BstAFI | CTTAAG | 1 cut(s) | 34 |
| BstAUI | TGTACA | 1 cut(s) | 7 |
| BstC8I | GCNNGC | 2 cut(s) | 75, 346 |
| BstF5I | GGATG | 1 cut(s) | 370 |
| BstHHI | GCGC | 1 cut(s) | 420 |
| BstKTI | GATC | 1 cut(s) | 41 |
| BstMAI | GTCTC | 1 cut(s) | 478 |
| BstMBI | GATC | 1 cut(s) | 38 |
| BstX2I | RGATCY | 1 cut(s) | 38 |
| BstYI | RGATCY | 1 cut(s) | 38 |
| BsuI | GTATCC | 1 cut(s) | 188 |
| BtsCI | GGATG | 1 cut(s) | 370 |
| Cac8I | GCNNGC | 2 cut(s) | 75, 346 |
| CfoI | GCGC | 1 cut(s) | 420 |
| Csp6I | GTAC | 3 cut(s) | 8, 161, 432 |
| CviAII | CATG | 1 cut(s) | 98 |
| CviJI | RGCY | 3 cut(s) | 73, 263, 348 |
| CviKI_1 | RGCY | 3 cut(s) | 73, 263, 348 |
| CviQI | GTAC | 3 cut(s) | 8, 161, 432 |
| DpnI | GATC | 1 cut(s) | 40 |
| DpnII | GATC | 1 cut(s) | 38 |
| DraI | TTTAAA | 1 cut(s) | 456 |
| Eco24I | GRGCYC | 1 cut(s) | 350 |
| EcoRI | GAATTC | 1 cut(s) | 47 |
| EcoT38I | GRGCYC | 1 cut(s) | 350 |
| FaeI | CATG | 1 cut(s) | 101 |
| FatI | CATG | 1 cut(s) | 97 |
| FauI | CCCGC | 1 cut(s) | 337 |
| FauNDI | CATATG | 1 cut(s) | 439 |
| FokI | GGATG | 1 cut(s) | 377 |
| FriOI | GRGCYC | 1 cut(s) | 350 |
| FspBI | CTAG | 3 cut(s) | 264, 287, 465 |
| GlaI | GCGC | 1 cut(s) | 419 |
| GsaI | CCCAGC | 1 cut(s) | 234 |
| HhaI | GCGC | 1 cut(s) | 420 |
| Hin1II | CATG | 1 cut(s) | 101 |
| Hin6I | GCGC | 1 cut(s) | 418 |
| HinP1I | GCGC | 1 cut(s) | 418 |
| Hpy166II | GTNNAC | 1 cut(s) | 479 |
| Hpy188I | TCNGA | 2 cut(s) | 271, 341 |
| Hpy8I | GTNNAC | 1 cut(s) | 479 |
| HpyAV | CCTTC | 1 cut(s) | 150 |
| HpyCH4IV | ACGT | 1 cut(s) | 434 |
| HpyCH4V | TGCA | 1 cut(s) | 92 |
| HpySE526I | ACGT | 1 cut(s) | 434 |
| Hsp92II | CATG | 1 cut(s) | 101 |
| HspAI | GCGC | 1 cut(s) | 418 |
| Kzo9I | GATC | 1 cut(s) | 38 |
| LpnPI | CCDG | 5 cut(s) | 50, 90, 138, 189, 216 |
| MaeI | CTAG | 3 cut(s) | 264, 287, 465 |
| MaeII | ACGT | 1 cut(s) | 434 |
| MaeIII | GTNAC | 1 cut(s) | 100 |
| MalI | GATC | 1 cut(s) | 40 |
| MbiI | CCGCTC | 1 cut(s) | 344 |
| MboI | GATC | 1 cut(s) | 38 |
| MboII | GAAGA | 1 cut(s) | 231 |
| MflI | RGATCY | 1 cut(s) | 38 |
| MhlI | GDGCHC | 1 cut(s) | 350 |
| MluCI | AATT | 7 cut(s) | 47, 164, 222, 273, 313, 372, 490 |
| MmeI | TCCRAC | 1 cut(s) | 226 |
| MnlI | CCTC | 3 cut(s) | 184, 320, 406 |
| MseI | TTAA | 2 cut(s) | 35, 455 |
| MspCI | CTTAAG | 1 cut(s) | 34 |
| NdeI | CATATG | 1 cut(s) | 439 |
| NdeII | GATC | 1 cut(s) | 38 |
| NlaIII | CATG | 1 cut(s) | 101 |
| PspFI | CCCAGC | 1 cut(s) | 230 |
| PsuI | RGATCY | 1 cut(s) | 38 |
| RsaI | GTAC | 3 cut(s) | 9, 162, 433 |
| RsaNI | GTAC | 3 cut(s) | 8, 161, 432 |
| SaqAI | TTAA | 2 cut(s) | 35, 455 |
| Sau3AI | GATC | 1 cut(s) | 38 |
| SduI | GDGCHC | 1 cut(s) | 350 |
| SetI | ASST | 3 cut(s) | 265, 269, 437 |
| SmlI | CTYRAG | 1 cut(s) | 34 |
| SmoI | CTYRAG | 1 cut(s) | 34 |
| Sse9I | AATT | 7 cut(s) | 47, 164, 222, 273, 313, 372, 490 |
| SsiI | CCGC | 1 cut(s) | 344 |
| SspMI | CTAG | 3 cut(s) | 264, 287, 465 |
| TaiI | ACGT | 1 cut(s) | 437 |
| TaqI | TCGA | 1 cut(s) | 379 |
| TasI | AATT | 7 cut(s) | 47, 164, 222, 273, 313, 372, 490 |
| TatI | WGTACW | 1 cut(s) | 7 |
| Tru1I | TTAA | 2 cut(s) | 35, 455 |
| Tru9I | TTAA | 2 cut(s) | 35, 455 |
| TspDTI | ATGAA | 3 cut(s) | 17, 40, 86 |
| Vha464I | CTTAAG | 1 cut(s) | 34 |
| XapI | RAATTY | 2 cut(s) | 47, 273 |
| XspI | CTAG | 3 cut(s) | 264, 287, 465 |