One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATCG00680 |
| malus_domestica | MD00G1121600.v1.1 |
| prunus_persica | Prupe.7G029800_v2.0.a1 |
| pyrus_communis | pycom05g10070 |
| rosa_chinensis | RchiOBHm_Chr6g0260471 RchiOBHm_CPg0501971 |
| rosa_laevigata | RLG00000000054 RLG00000000070 RLG00000000176 RLG00000000220 RLG00000000266 RLG00000033771 RLG00000037104 |
| rosa_multiflora | Rmu_sc0001010.1_g000065 Rmu_sc0004517.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00107490 Rroxscaffold_2G00119020 Rroxscaffold_2G00119180 Rroxscaffold_3G00233680 |
| rosa_rugosa | RorugMtG0002600 |
| rosa_samantha | Rh2CG305200 Rh2DG341500 Rh7AG405500 Rh7CG423100 |
| rosa_wichuraiana | Rw7G013590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 680 |
| AccII | CGCG | 1 cut(s) | 969 |
| AciI | CCGC | 5 cut(s) | 66, 473, 680, 816, 909 |
| AclWI | GGATC | 5 cut(s) | 201, 404, 932, 1142, 1193 |
| AcoI | YGGCCR | 1 cut(s) | 126 |
| AcsI | RAATTY | 3 cut(s) | 258, 984, 1172 |
| AfaI | GTAC | 4 cut(s) | 88, 220, 372, 768 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 392 |
| AgsI | TTSAA | 4 cut(s) | 577, 791, 992, 1012 |
| AjnI | CCWGG | 3 cut(s) | 100, 328, 421 |
| AleI | CACNNNNGTG | 1 cut(s) | 947 |
| AluBI | AGCT | 2 cut(s) | 170, 710 |
| AluI | AGCT | 2 cut(s) | 170, 710 |
| Alw21I | GWGCWC | 1 cut(s) | 136 |
| Alw26I | GTCTC | 1 cut(s) | 813 |
| AlwI | GGATC | 5 cut(s) | 201, 404, 932, 1142, 1193 |
| AoxI | GGCC | 1 cut(s) | 126 |
| ApeKI | GCWGC | 2 cut(s) | 167, 449 |
| ApoI | RAATTY | 3 cut(s) | 258, 984, 1172 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 1206 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 795 |
| AspLEI | GCGC | 3 cut(s) | 756, 971, 1112 |
| AspS9I | GGNCC | 2 cut(s) | 326, 585 |
| AsuC2I | CCSGG | 1 cut(s) | 277 |
| AsuHPI | GGTGA | 1 cut(s) | 992 |
| AvaII | GGWCC | 2 cut(s) | 326, 585 |
| BanII | GRGCYC | 1 cut(s) | 686 |
| BbsI | GAAGAC | 2 cut(s) | 232, 1219 |
| Bbv12I | GWGCWC | 1 cut(s) | 136 |
| BbvI | GCAGC | 2 cut(s) | 179, 461 |
| BccI | CCATC | 3 cut(s) | 492, 695, 1013 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 745, 779 |
| BciT130I | CCWGG | 3 cut(s) | 102, 330, 423 |
| BciVI | GTATCC | 1 cut(s) | 606 |
| BcnI | CCSGG | 1 cut(s) | 277 |
| BcoDI | GTCTC | 1 cut(s) | 813 |
| BfaI | CTAG | 2 cut(s) | 197, 963 |
| BfoI | RGCGCY | 1 cut(s) | 1113 |
| BfuI | GTATCC | 1 cut(s) | 606 |
| BglII | AGATCT | 1 cut(s) | 249 |
| BisI | GCNGC | 3 cut(s) | 168, 450, 910 |
| BlsI | GCNGC | 3 cut(s) | 169, 451, 911 |
| Bme1390I | CCNGG | 4 cut(s) | 102, 277, 330, 423 |
| Bme18I | GGWCC | 2 cut(s) | 326, 585 |
| BmgT120I | GGNCC | 2 cut(s) | 326, 585 |
| BmrFI | CCNGG | 4 cut(s) | 102, 277, 330, 423 |
| BmsI | GCATC | 1 cut(s) | 1150 |
| BpiI | GAAGAC | 2 cut(s) | 232, 1219 |
| BpuEI | CTTGAG | 1 cut(s) | 1149 |
| BpuMI | CCSGG | 1 cut(s) | 277 |
| BsaJI | CCNNGG | 2 cut(s) | 276, 1040 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 28 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 392 |
| BseBI | CCWGG | 3 cut(s) | 102, 330, 423 |
| BseDI | CCNNGG | 2 cut(s) | 276, 1040 |
| BseGI | GGATG | 2 cut(s) | 706, 727 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 392 |
| BseXI | GCAGC | 2 cut(s) | 179, 461 |
| BseYI | CCCAGC | 1 cut(s) | 648 |
| Bsh1236I | CGCG | 1 cut(s) | 969 |
| BshFI | GGCC | 1 cut(s) | 128 |
| BsiHKAI | GWGCWC | 1 cut(s) | 136 |
| BsiSI | CCGG | 3 cut(s) | 129, 276, 539 |
| BsiWI | CGTACG | 1 cut(s) | 766 |
| BslFI | GGGAC | 1 cut(s) | 469 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 392 |
| BsmAI | GTCTC | 1 cut(s) | 813 |
| BsmBI | CGTCTC | 1 cut(s) | 813 |
| BsmFI | GGGAC | 1 cut(s) | 469 |
| BsmI | GAATGC | 1 cut(s) | 1181 |
| BsnI | GGCC | 1 cut(s) | 128 |
| Bsp1286I | GDGCHC | 2 cut(s) | 136, 686 |
| Bsp143I | GATC | 7 cut(s) | 193, 249, 409, 937, 997, 1147, 1198 |
| BspACI | CCGC | 5 cut(s) | 66, 473, 680, 816, 909 |
| BspANI | GGCC | 1 cut(s) | 128 |
| BspFNI | CGCG | 1 cut(s) | 969 |
| BspHI | TCATGA | 1 cut(s) | 33 |
| BspPI | GGATC | 5 cut(s) | 201, 404, 932, 1142, 1193 |
| BspQI | GCTCTTC | 1 cut(s) | 1088 |
| BsrBI | CCGCTC | 1 cut(s) | 680 |
| BssECI | CCNNGG | 2 cut(s) | 276, 1040 |
| BssMI | GATC | 7 cut(s) | 193, 249, 409, 937, 997, 1147, 1198 |
| BssT1I | CCWWGG | 1 cut(s) | 1040 |
| Bst2UI | CCWGG | 3 cut(s) | 102, 330, 423 |
| Bst4CI | ACNGT | 1 cut(s) | 784 |
| Bst6I | CTCTTC | 1 cut(s) | 1088 |
| BstC8I | GCNNGC | 3 cut(s) | 286, 682, 1065 |
| BstDEI | CTNAG | 2 cut(s) | 246, 488 |
| BstF5I | GGATG | 2 cut(s) | 706, 727 |
| BstFNI | CGCG | 1 cut(s) | 969 |
| BstH2I | RGCGCY | 1 cut(s) | 1113 |
| BstHHI | GCGC | 3 cut(s) | 756, 971, 1112 |
| BstKTI | GATC | 7 cut(s) | 196, 252, 412, 940, 1000, 1150, 1201 |
| BstMAI | GTCTC | 1 cut(s) | 813 |
| BstMBI | GATC | 7 cut(s) | 193, 249, 409, 937, 997, 1147, 1198 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 968, 1073 |
| BstNI | CCWGG | 3 cut(s) | 102, 330, 423 |
| BstNSI | RCATGY | 1 cut(s) | 1067 |
| BstSCI | CCNGG | 4 cut(s) | 100, 275, 328, 421 |
| BstUI | CGCG | 1 cut(s) | 969 |
| BstV1I | GCAGC | 2 cut(s) | 179, 461 |
| BstV2I | GAAGAC | 2 cut(s) | 232, 1219 |
| BstX2I | RGATCY | 3 cut(s) | 193, 249, 1198 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 108, 1047 |
| BstYI | RGATCY | 3 cut(s) | 193, 249, 1198 |
| BsuI | GTATCC | 1 cut(s) | 606 |
| BsuRI | GGCC | 1 cut(s) | 128 |
| BtsCI | GGATG | 2 cut(s) | 706, 727 |
| Cac8I | GCNNGC | 3 cut(s) | 286, 682, 1065 |
| CciI | TCATGA | 1 cut(s) | 33 |
| CfoI | GCGC | 3 cut(s) | 756, 971, 1112 |
| Cfr13I | GGNCC | 2 cut(s) | 326, 585 |
| CseI | GACGC | 1 cut(s) | 975 |
| Csp6I | GTAC | 4 cut(s) | 87, 219, 371, 767 |
| CviAII | CATG | 5 cut(s) | 34, 60, 308, 1064, 1106 |
| CviJI | RGCY | 8 cut(s) | 128, 153, 170, 284, 434, 684, 710, 836 |
| CviKI_1 | RGCY | 8 cut(s) | 128, 153, 170, 284, 434, 684, 710, 836 |
| CviQI | GTAC | 4 cut(s) | 87, 219, 371, 767 |
| DdeI | CTNAG | 2 cut(s) | 246, 488 |
| DpnI | GATC | 7 cut(s) | 195, 251, 411, 939, 999, 1149, 1200 |
| DpnII | GATC | 7 cut(s) | 193, 249, 409, 937, 997, 1147, 1198 |
| EaeI | YGGCCR | 1 cut(s) | 126 |
| Eam1104I | CTCTTC | 1 cut(s) | 1088 |
| EarI | CTCTTC | 1 cut(s) | 1088 |
| EciI | GGCGGA | 1 cut(s) | 831 |
| Eco130I | CCWWGG | 1 cut(s) | 1040 |
| Eco24I | GRGCYC | 1 cut(s) | 686 |
| Eco47I | GGWCC | 2 cut(s) | 326, 585 |
| EcoRI | GAATTC | 1 cut(s) | 258 |
| EcoRII | CCWGG | 3 cut(s) | 100, 328, 421 |
| EcoT14I | CCWWGG | 1 cut(s) | 1040 |
| EcoT38I | GRGCYC | 1 cut(s) | 686 |
| ErhI | CCWWGG | 1 cut(s) | 1040 |
| Esp3I | CGTCTC | 1 cut(s) | 813 |
| FaeI | CATG | 5 cut(s) | 37, 63, 311, 1067, 1109 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 217, 249 |
| FaqI | GGGAC | 1 cut(s) | 469 |
| FatI | CATG | 5 cut(s) | 33, 59, 307, 1063, 1105 |
| FauI | CCCGC | 2 cut(s) | 466, 673 |
| Fnu4HI | GCNGC | 3 cut(s) | 168, 450, 910 |
| FokI | GGATG | 2 cut(s) | 713, 714 |
| FriOI | GRGCYC | 1 cut(s) | 686 |
| Fsp4HI | GCNGC | 3 cut(s) | 168, 450, 910 |
| FspBI | CTAG | 2 cut(s) | 197, 963 |
| GlaI | GCGC | 3 cut(s) | 755, 970, 1111 |
| GluI | GCNGC | 3 cut(s) | 168, 450, 910 |
| GsaI | CCCAGC | 1 cut(s) | 652 |
| HaeII | RGCGCY | 1 cut(s) | 1113 |
| HaeIII | GGCC | 1 cut(s) | 128 |
| HapII | CCGG | 3 cut(s) | 129, 276, 539 |
| HgaI | GACGC | 1 cut(s) | 975 |
| HhaI | GCGC | 3 cut(s) | 756, 971, 1112 |
| Hin1II | CATG | 5 cut(s) | 37, 63, 311, 1067, 1109 |
| Hin6I | GCGC | 3 cut(s) | 754, 969, 1110 |
| HinP1I | GCGC | 3 cut(s) | 754, 969, 1110 |
| HinfI | GANTC | 5 cut(s) | 37, 97, 605, 860, 924 |
| HpaII | CCGG | 3 cut(s) | 129, 276, 539 |
| HphI | GGTGA | 1 cut(s) | 992 |
| Hpy166II | GTNNAC | 1 cut(s) | 1053 |
| Hpy188I | TCNGA | 6 cut(s) | 346, 677, 801, 1018, 1094, 1196 |
| Hpy188III | TCNNGA | 3 cut(s) | 34, 197, 1151 |
| Hpy8I | GTNNAC | 1 cut(s) | 1053 |
| Hpy99I | CGWCG | 1 cut(s) | 774 |
| HpyAV | CCTTC | 4 cut(s) | 113, 360, 846, 878 |
| HpyCH4III | ACNGT | 1 cut(s) | 784 |
| HpyCH4IV | ACGT | 2 cut(s) | 217, 769 |
| HpyCH4V | TGCA | 2 cut(s) | 302, 449 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 968, 1073 |
| HpyF3I | CTNAG | 2 cut(s) | 246, 488 |
| HpySE526I | ACGT | 2 cut(s) | 217, 769 |
| Hsp92II | CATG | 5 cut(s) | 37, 63, 311, 1067, 1109 |
| HspAI | GCGC | 3 cut(s) | 754, 969, 1110 |
| Kzo9I | GATC | 7 cut(s) | 193, 249, 409, 937, 997, 1147, 1198 |
| LguI | GCTCTTC | 1 cut(s) | 1088 |
| LmnI | GCTCC | 2 cut(s) | 131, 1178 |
| Lsp1109I | GCAGC | 2 cut(s) | 179, 461 |
| LweI | GCATC | 1 cut(s) | 1150 |
| MaeI | CTAG | 2 cut(s) | 197, 963 |
| MaeII | ACGT | 2 cut(s) | 217, 769 |
| MaeIII | GTNAC | 2 cut(s) | 113, 310 |
| MalI | GATC | 7 cut(s) | 195, 251, 411, 939, 999, 1149, 1200 |
| MbiI | CCGCTC | 1 cut(s) | 680 |
| MboI | GATC | 7 cut(s) | 193, 249, 409, 937, 997, 1147, 1198 |
| MboII | GAAGA | 5 cut(s) | 237, 1075, 1078, 1081, 1224 |
| MfeI | CAATTG | 1 cut(s) | 974 |
| MflI | RGATCY | 3 cut(s) | 193, 249, 1198 |
| MhlI | GDGCHC | 2 cut(s) | 136, 686 |
| MluCI | AATT | 8 cut(s) | 55, 258, 825, 891, 974, 984, 992, 1172 |
| MlyI | GAGTC | 2 cut(s) | 31, 933 |
| MmeI | TCCRAC | 6 cut(s) | 50, 369, 524, 612, 644, 1226 |
| MnlI | CCTC | 4 cut(s) | 241, 394, 419, 445 |
| MroXI | GAANNNNTTC | 1 cut(s) | 795 |
| MslI | CAYNNNNRTG | 2 cut(s) | 489, 947 |
| MspI | CCGG | 3 cut(s) | 129, 276, 539 |
| MspR9I | CCNGG | 4 cut(s) | 102, 277, 330, 423 |
| MunI | CAATTG | 1 cut(s) | 974 |
| Mva1269I | GAATGC | 1 cut(s) | 1181 |
| MvaI | CCWGG | 3 cut(s) | 102, 330, 423 |
| MvnI | CGCG | 1 cut(s) | 969 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 968, 1073 |
| NciI | CCSGG | 1 cut(s) | 277 |
| NdeII | GATC | 7 cut(s) | 193, 249, 409, 937, 997, 1147, 1198 |
| NlaIII | CATG | 5 cut(s) | 37, 63, 311, 1067, 1109 |
| NspI | RCATGY | 1 cut(s) | 1067 |
| OliI | CACNNNNGTG | 1 cut(s) | 947 |
| PaeI | GCATGC | 1 cut(s) | 1067 |
| PagI | TCATGA | 1 cut(s) | 33 |
| PciSI | GCTCTTC | 1 cut(s) | 1088 |
| PctI | GAATGC | 1 cut(s) | 1181 |
| PdmI | GAANNNNTTC | 1 cut(s) | 795 |
| PfeI | GAWTC | 3 cut(s) | 97, 605, 860 |
| Pfl23II | CGTACG | 1 cut(s) | 766 |
| PfoI | TCCNGGA | 2 cut(s) | 328, 421 |
| PkrI | GCNGC | 3 cut(s) | 169, 451, 911 |
| PleI | GAGTC | 2 cut(s) | 31, 932 |
| PpsI | GAGTC | 2 cut(s) | 31, 932 |
| Psp6I | CCWGG | 3 cut(s) | 100, 328, 421 |
| PspFI | CCCAGC | 1 cut(s) | 648 |
| PspGI | CCWGG | 3 cut(s) | 100, 328, 421 |
| PspLI | CGTACG | 1 cut(s) | 766 |
| PspPI | GGNCC | 2 cut(s) | 326, 585 |
| PsuI | RGATCY | 3 cut(s) | 193, 249, 1198 |
| RsaI | GTAC | 4 cut(s) | 88, 220, 372, 768 |
| RsaNI | GTAC | 4 cut(s) | 87, 219, 371, 767 |
| RseI | CAYNNNNRTG | 2 cut(s) | 489, 947 |
| SapI | GCTCTTC | 1 cut(s) | 1088 |
| SatI | GCNGC | 3 cut(s) | 168, 450, 910 |
| Sau3AI | GATC | 7 cut(s) | 193, 249, 409, 937, 997, 1147, 1198 |
| Sau96I | GGNCC | 2 cut(s) | 326, 585 |
| SchI | GAGTC | 2 cut(s) | 31, 933 |
| ScrFI | CCNGG | 4 cut(s) | 102, 277, 330, 423 |
| SduI | GDGCHC | 2 cut(s) | 136, 686 |
| SfaNI | GCATC | 1 cut(s) | 1150 |
| SinI | GGWCC | 2 cut(s) | 326, 585 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 489, 947 |
| SmlI | CTYRAG | 1 cut(s) | 1164 |
| SmoI | CTYRAG | 1 cut(s) | 1164 |
| SphI | GCATGC | 1 cut(s) | 1067 |
| Sse9I | AATT | 8 cut(s) | 55, 258, 825, 891, 974, 984, 992, 1172 |
| SsiI | CCGC | 5 cut(s) | 66, 473, 680, 816, 909 |
| SspI | AATATT | 2 cut(s) | 204, 580 |
| SspMI | CTAG | 2 cut(s) | 197, 963 |
| StyD4I | CCNGG | 4 cut(s) | 100, 275, 328, 421 |
| StyI | CCWWGG | 1 cut(s) | 1040 |
| TaaI | ACNGT | 1 cut(s) | 784 |
| TaiI | ACGT | 2 cut(s) | 220, 772 |
| TaqI | TCGA | 2 cut(s) | 876, 897 |
| TasI | AATT | 8 cut(s) | 55, 258, 825, 891, 974, 984, 992, 1172 |
| TauI | GCSGC | 1 cut(s) | 912 |
| TfiI | GAWTC | 3 cut(s) | 97, 605, 860 |
| TseI | GCWGC | 2 cut(s) | 167, 449 |
| TspDTI | ATGAA | 5 cut(s) | 22, 48, 228, 251, 296 |
| TspGWI | ACGGA | 3 cut(s) | 367, 485, 837 |
| VpaK11BI | GGWCC | 2 cut(s) | 326, 585 |
| XapI | RAATTY | 3 cut(s) | 258, 984, 1172 |
| XbaI | TCTAGA | 1 cut(s) | 196 |
| XceI | RCATGY | 1 cut(s) | 1067 |
| XmnI | GAANNNNTTC | 1 cut(s) | 795 |
| XspI | CTAG | 2 cut(s) | 197, 963 |