One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATCG00680 |
| malus_domestica | MD00G1121600.v1.1 |
| prunus_persica | Prupe.7G029800_v2.0.a1 |
| pyrus_communis | pycom05g10070 |
| rosa_chinensis | RchiOBHm_Chr6g0260471 RchiOBHm_CPg0501971 |
| rosa_laevigata | RLG00000000054 RLG00000000070 RLG00000000176 RLG00000000220 RLG00000000266 RLG00000033771 RLG00000037104 |
| rosa_multiflora | Rmu_sc0001010.1_g000065 Rmu_sc0004517.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00107490 Rroxscaffold_2G00119020 Rroxscaffold_2G00119180 Rroxscaffold_3G00233680 |
| rosa_rugosa | RorugMtG0002600 |
| rosa_samantha | Rh2CG305200 Rh2DG341500 Rh7AG405500 Rh7CG423100 |
| rosa_wichuraiana | Rw7G013590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 470 |
| AccBSI | CCGCTC | 1 cut(s) | 824 |
| AccI | GTMKAC | 1 cut(s) | 957 |
| AccII | CGCG | 1 cut(s) | 658 |
| AccIII | TCCGGA | 1 cut(s) | 1288 |
| AciI | CCGC | 2 cut(s) | 824, 1053 |
| AclWI | GGATC | 9 cut(s) | 38, 131, 152, 207, 347, 410, 678, 1280, 1331 |
| AcsI | RAATTY | 4 cut(s) | 264, 756, 1129, 1310 |
| AfaI | GTAC | 3 cut(s) | 226, 378, 912 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 398, 747, 806 |
| AflIII | ACRYGT | 1 cut(s) | 1111 |
| AgsI | TTSAA | 7 cut(s) | 40, 548, 641, 935, 1118, 1136, 1156 |
| AjiI | CACGTC | 1 cut(s) | 1112 |
| AluBI | AGCT | 6 cut(s) | 83, 440, 590, 746, 773, 904 |
| AluI | AGCT | 6 cut(s) | 83, 440, 590, 746, 773, 904 |
| Alw26I | GTCTC | 1 cut(s) | 163 |
| AlwI | GGATC | 9 cut(s) | 38, 131, 152, 207, 347, 410, 678, 1280, 1331 |
| Aor13HI | TCCGGA | 1 cut(s) | 1288 |
| AoxI | GGCC | 1 cut(s) | 331 |
| ApeKI | GCWGC | 2 cut(s) | 455, 572 |
| ApoI | RAATTY | 4 cut(s) | 264, 756, 1129, 1310 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 1344 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 439, 939 |
| AspLEI | GCGC | 2 cut(s) | 660, 713 |
| AspS9I | GGNCC | 4 cut(s) | 332, 462, 650, 1316 |
| AsuC2I | CCSGG | 1 cut(s) | 429 |
| AsuHPI | GGTGA | 1 cut(s) | 1136 |
| AvaII | GGWCC | 3 cut(s) | 462, 650, 1316 |
| AxyI | CCTNAGG | 1 cut(s) | 466 |
| BanII | GRGCYC | 1 cut(s) | 830 |
| BbsI | GAAGAC | 1 cut(s) | 1357 |
| BbvI | GCAGC | 2 cut(s) | 467, 559 |
| BccI | CCATC | 2 cut(s) | 103, 1157 |
| BceAI | ACGGC | 1 cut(s) | 113 |
| BciVI | GTATCC | 1 cut(s) | 671 |
| BcnI | CCSGG | 1 cut(s) | 429 |
| BcoDI | GTCTC | 1 cut(s) | 163 |
| BfaI | CTAG | 6 cut(s) | 203, 336, 561, 770, 1107, 1251 |
| BfoI | RGCGCY | 1 cut(s) | 714 |
| BfuAI | ACCTGC | 1 cut(s) | 470 |
| BfuI | GTATCC | 1 cut(s) | 671 |
| BglII | AGATCT | 1 cut(s) | 255 |
| BisI | GCNGC | 3 cut(s) | 456, 573, 1054 |
| BlpI | GCTNAGC | 1 cut(s) | 718 |
| BlsI | GCNGC | 3 cut(s) | 457, 574, 1055 |
| Bme1390I | CCNGG | 1 cut(s) | 429 |
| Bme18I | GGWCC | 3 cut(s) | 462, 650, 1316 |
| BmgBI | CACGTC | 1 cut(s) | 1112 |
| BmgT120I | GGNCC | 4 cut(s) | 332, 462, 650, 1316 |
| BmiI | GGNNCC | 2 cut(s) | 463, 652 |
| BmrFI | CCNGG | 1 cut(s) | 429 |
| BmsI | GCATC | 1 cut(s) | 1288 |
| BpiI | GAAGAC | 1 cut(s) | 1357 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 718 |
| BpuEI | CTTGAG | 1 cut(s) | 1287 |
| BpuMI | CCSGG | 1 cut(s) | 429 |
| BsaBI | GATNNNNATC | 2 cut(s) | 48, 62 |
| BsaJI | CCNNGG | 2 cut(s) | 11, 1184 |
| BsaWI | WCCGGW | 2 cut(s) | 368, 1288 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 398, 747, 806 |
| Bse1I | ACTGG | 2 cut(s) | 97, 944 |
| Bse21I | CCTNAGG | 1 cut(s) | 466 |
| Bse8I | GATNNNNATC | 2 cut(s) | 48, 62 |
| BseAI | TCCGGA | 1 cut(s) | 1288 |
| BseDI | CCNNGG | 2 cut(s) | 11, 1184 |
| BseGI | GGATG | 1 cut(s) | 871 |
| BseJI | GATNNNNATC | 2 cut(s) | 48, 62 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 398, 747, 806 |
| BseMII | CTCAG | 1 cut(s) | 294 |
| BseNI | ACTGG | 2 cut(s) | 97, 944 |
| BseXI | GCAGC | 2 cut(s) | 467, 559 |
| Bsh1236I | CGCG | 1 cut(s) | 658 |
| Bsh1285I | CGRYCG | 1 cut(s) | 52 |
| BshFI | GGCC | 1 cut(s) | 333 |
| BsiEI | CGRYCG | 1 cut(s) | 52 |
| BsiSI | CCGG | 4 cut(s) | 369, 428, 800, 1289 |
| BslFI | GGGAC | 3 cut(s) | 475, 636, 977 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 398, 747, 806 |
| BsmAI | GTCTC | 1 cut(s) | 163 |
| BsmFI | GGGAC | 3 cut(s) | 475, 636, 977 |
| BsnI | GGCC | 1 cut(s) | 333 |
| Bsp1286I | GDGCHC | 1 cut(s) | 830 |
| Bsp13I | TCCGGA | 1 cut(s) | 1288 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 718 |
| BspACI | CCGC | 2 cut(s) | 824, 1053 |
| BspANI | GGCC | 1 cut(s) | 333 |
| BspCNI | CTCAG | 1 cut(s) | 293 |
| BspEI | TCCGGA | 1 cut(s) | 1288 |
| BspFNI | CGCG | 1 cut(s) | 658 |
| BspLI | GGNNCC | 2 cut(s) | 463, 652 |
| BspMI | ACCTGC | 1 cut(s) | 470 |
| BspPI | GGATC | 9 cut(s) | 38, 131, 152, 207, 347, 410, 678, 1280, 1331 |
| BspQI | GCTCTTC | 1 cut(s) | 1226 |
| BsrBI | CCGCTC | 1 cut(s) | 824 |
| BsrI | ACTGG | 2 cut(s) | 97, 944 |
| BssECI | CCNNGG | 2 cut(s) | 11, 1184 |
| BssT1I | CCWWGG | 2 cut(s) | 11, 1184 |
| Bst4CI | ACNGT | 5 cut(s) | 31, 553, 1039, 1093, 1145 |
| Bst6I | CTCTTC | 1 cut(s) | 1226 |
| BstC8I | GCNNGC | 4 cut(s) | 292, 715, 826, 1203 |
| BstDEI | CTNAG | 6 cut(s) | 252, 280, 466, 494, 718, 1331 |
| BstF5I | GGATG | 1 cut(s) | 871 |
| BstFNI | CGCG | 1 cut(s) | 658 |
| BstH2I | RGCGCY | 1 cut(s) | 714 |
| BstHHI | GCGC | 2 cut(s) | 660, 713 |
| BstMAI | GTCTC | 1 cut(s) | 163 |
| BstMCI | CGRYCG | 1 cut(s) | 52 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 719, 1211 |
| BstNSI | RCATGY | 1 cut(s) | 1205 |
| BstSCI | CCNGG | 1 cut(s) | 427 |
| BstUI | CGCG | 1 cut(s) | 658 |
| BstV1I | GCAGC | 2 cut(s) | 467, 559 |
| BstV2I | GAAGAC | 1 cut(s) | 1357 |
| BstX2I | RGATCY | 3 cut(s) | 199, 255, 1336 |
| BstYI | RGATCY | 3 cut(s) | 199, 255, 1336 |
| Bsu36I | CCTNAGG | 1 cut(s) | 466 |
| BsuI | GTATCC | 1 cut(s) | 671 |
| BsuRI | GGCC | 1 cut(s) | 333 |
| BtrI | CACGTC | 1 cut(s) | 1112 |
| BtsCI | GGATG | 1 cut(s) | 871 |
| BveI | ACCTGC | 1 cut(s) | 470 |
| Cac8I | GCNNGC | 4 cut(s) | 292, 715, 826, 1203 |
| CfoI | GCGC | 2 cut(s) | 660, 713 |
| Cfr13I | GGNCC | 4 cut(s) | 332, 462, 650, 1316 |
| Csp6I | GTAC | 3 cut(s) | 225, 377, 911 |
| CviAII | CATG | 4 cut(s) | 314, 899, 1202, 1244 |
| CviQI | GTAC | 3 cut(s) | 225, 377, 911 |
| DdeI | CTNAG | 6 cut(s) | 252, 280, 466, 494, 718, 1331 |
| Eam1104I | CTCTTC | 1 cut(s) | 1226 |
| EarI | CTCTTC | 1 cut(s) | 1226 |
| Eco130I | CCWWGG | 2 cut(s) | 11, 1184 |
| Eco24I | GRGCYC | 1 cut(s) | 830 |
| Eco47I | GGWCC | 3 cut(s) | 462, 650, 1316 |
| Eco81I | CCTNAGG | 1 cut(s) | 466 |
| EcoO109I | RGGNCCY | 1 cut(s) | 462 |
| EcoRI | GAATTC | 1 cut(s) | 264 |
| EcoT14I | CCWWGG | 2 cut(s) | 11, 1184 |
| EcoT22I | ATGCAT | 1 cut(s) | 78 |
| EcoT38I | GRGCYC | 1 cut(s) | 830 |
| ErhI | CCWWGG | 2 cut(s) | 11, 1184 |
| FaeI | CATG | 4 cut(s) | 317, 902, 1205, 1247 |
| FaqI | GGGAC | 3 cut(s) | 475, 636, 977 |
| FatI | CATG | 4 cut(s) | 313, 898, 1201, 1243 |
| FauI | CCCGC | 1 cut(s) | 817 |
| FauNDI | CATATG | 1 cut(s) | 534 |
| FblI | GTMKAC | 1 cut(s) | 957 |
| Fnu4HI | GCNGC | 3 cut(s) | 456, 573, 1054 |
| FokI | GGATG | 1 cut(s) | 858 |
| FriOI | GRGCYC | 1 cut(s) | 830 |
| Fsp4HI | GCNGC | 3 cut(s) | 456, 573, 1054 |
| FspBI | CTAG | 6 cut(s) | 203, 336, 561, 770, 1107, 1251 |
| GlaI | GCGC | 2 cut(s) | 659, 712 |
| GluI | GCNGC | 3 cut(s) | 456, 573, 1054 |
| HaeII | RGCGCY | 1 cut(s) | 714 |
| HaeIII | GGCC | 1 cut(s) | 333 |
| HapII | CCGG | 4 cut(s) | 369, 428, 800, 1289 |
| HhaI | GCGC | 2 cut(s) | 660, 713 |
| Hin1II | CATG | 4 cut(s) | 317, 902, 1205, 1247 |
| Hin6I | GCGC | 2 cut(s) | 658, 711 |
| HinP1I | GCGC | 2 cut(s) | 658, 711 |
| HincII | GTYRAC | 1 cut(s) | 958 |
| HindII | GTYRAC | 1 cut(s) | 958 |
| HindIII | AAGCTT | 1 cut(s) | 744 |
| HinfI | GANTC | 2 cut(s) | 1004, 1068 |
| HpaII | CCGG | 4 cut(s) | 369, 428, 800, 1289 |
| HphI | GGTGA | 1 cut(s) | 1136 |
| Hpy166II | GTNNAC | 3 cut(s) | 506, 958, 1191 |
| Hpy188I | TCNGA | 6 cut(s) | 145, 352, 742, 821, 1162, 1232 |
| Hpy188III | TCNNGA | 5 cut(s) | 47, 155, 203, 761, 1289 |
| Hpy8I | GTNNAC | 3 cut(s) | 506, 958, 1191 |
| Hpy99I | CGWCG | 3 cut(s) | 35, 918, 962 |
| HpyAV | CCTTC | 1 cut(s) | 366 |
| HpyCH4III | ACNGT | 5 cut(s) | 31, 553, 1039, 1093, 1145 |
| HpyCH4IV | ACGT | 4 cut(s) | 223, 913, 926, 1111 |
| HpyCH4V | TGCA | 3 cut(s) | 76, 308, 455 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 719, 1211 |
| HpyF3I | CTNAG | 6 cut(s) | 252, 280, 466, 494, 718, 1331 |
| HpySE526I | ACGT | 4 cut(s) | 223, 913, 926, 1111 |
| Hsp92II | CATG | 4 cut(s) | 317, 902, 1205, 1247 |
| HspAI | GCGC | 2 cut(s) | 658, 711 |
| Kpn2I | TCCGGA | 1 cut(s) | 1288 |
| LguI | GCTCTTC | 1 cut(s) | 1226 |
| Lsp1109I | GCAGC | 2 cut(s) | 467, 559 |
| LweI | GCATC | 1 cut(s) | 1288 |
| MaeI | CTAG | 6 cut(s) | 203, 336, 561, 770, 1107, 1251 |
| MaeII | ACGT | 4 cut(s) | 223, 913, 926, 1111 |
| MaeIII | GTNAC | 4 cut(s) | 88, 316, 1033, 1079 |
| MbiI | CCGCTC | 1 cut(s) | 824 |
| MboII | GAAGA | 3 cut(s) | 714, 1213, 1362 |
| MfeI | CAATTG | 1 cut(s) | 1118 |
| MflI | RGATCY | 3 cut(s) | 199, 255, 1336 |
| MhlI | GDGCHC | 1 cut(s) | 830 |
| MlyI | GAGTC | 1 cut(s) | 1077 |
| MmeI | TCCRAC | 3 cut(s) | 583, 709, 1364 |
| MnlI | CCTC | 5 cut(s) | 151, 400, 425, 886, 990 |
| Mph1103I | ATGCAT | 1 cut(s) | 78 |
| MroI | TCCGGA | 1 cut(s) | 1288 |
| MroXI | GAANNNNTTC | 2 cut(s) | 439, 939 |
| MslI | CAYNNNNRTG | 1 cut(s) | 495 |
| MspI | CCGG | 4 cut(s) | 369, 428, 800, 1289 |
| MspR9I | CCNGG | 1 cut(s) | 429 |
| MunI | CAATTG | 1 cut(s) | 1118 |
| MvnI | CGCG | 1 cut(s) | 658 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 719, 1211 |
| NciI | CCSGG | 1 cut(s) | 429 |
| NdeI | CATATG | 1 cut(s) | 534 |
| NlaIII | CATG | 4 cut(s) | 317, 902, 1205, 1247 |
| NlaIV | GGNNCC | 2 cut(s) | 463, 652 |
| NmuCI | GTSAC | 1 cut(s) | 1079 |
| NsiI | ATGCAT | 1 cut(s) | 78 |
| NspI | RCATGY | 1 cut(s) | 1205 |
| PaeI | GCATGC | 1 cut(s) | 1205 |
| PciSI | GCTCTTC | 1 cut(s) | 1226 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 126 |
| PdmI | GAANNNNTTC | 2 cut(s) | 439, 939 |
| PfeI | GAWTC | 1 cut(s) | 1004 |
| PfoI | TCCNGGA | 1 cut(s) | 427 |
| PkrI | GCNGC | 3 cut(s) | 457, 574, 1055 |
| Ple19I | CGATCG | 1 cut(s) | 52 |
| PleI | GAGTC | 1 cut(s) | 1076 |
| PpsI | GAGTC | 1 cut(s) | 1076 |
| PpuMI | RGGWCCY | 1 cut(s) | 462 |
| Psp5II | RGGWCCY | 1 cut(s) | 462 |
| PspN4I | GGNNCC | 2 cut(s) | 463, 652 |
| PspPI | GGNCC | 4 cut(s) | 332, 462, 650, 1316 |
| PspPPI | RGGWCCY | 1 cut(s) | 462 |
| PsuI | RGATCY | 3 cut(s) | 199, 255, 1336 |
| PvuI | CGATCG | 1 cut(s) | 52 |
| RsaI | GTAC | 3 cut(s) | 226, 378, 912 |
| RsaNI | GTAC | 3 cut(s) | 225, 377, 911 |
| RseI | CAYNNNNRTG | 1 cut(s) | 495 |
| SalI | GTCGAC | 1 cut(s) | 956 |
| SapI | GCTCTTC | 1 cut(s) | 1226 |
| SatI | GCNGC | 3 cut(s) | 456, 573, 1054 |
| Sau96I | GGNCC | 4 cut(s) | 332, 462, 650, 1316 |
| SchI | GAGTC | 1 cut(s) | 1077 |
| ScrFI | CCNGG | 1 cut(s) | 429 |
| SduI | GDGCHC | 1 cut(s) | 830 |
| SfaNI | GCATC | 1 cut(s) | 1288 |
| SinI | GGWCC | 3 cut(s) | 462, 650, 1316 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 495 |
| SmlI | CTYRAG | 1 cut(s) | 1302 |
| SmoI | CTYRAG | 1 cut(s) | 1302 |
| SphI | GCATGC | 1 cut(s) | 1205 |
| SsiI | CCGC | 2 cut(s) | 824, 1053 |
| SspI | AATATT | 2 cut(s) | 210, 544 |
| SspMI | CTAG | 6 cut(s) | 203, 336, 561, 770, 1107, 1251 |
| StyD4I | CCNGG | 1 cut(s) | 427 |
| StyI | CCWWGG | 2 cut(s) | 11, 1184 |
| TaaI | ACNGT | 5 cut(s) | 31, 553, 1039, 1093, 1145 |
| TaiI | ACGT | 4 cut(s) | 226, 916, 929, 1114 |
| TaqI | TCGA | 2 cut(s) | 107, 957 |
| TauI | GCSGC | 1 cut(s) | 1056 |
| TfiI | GAWTC | 1 cut(s) | 1004 |
| TseFI | GTSAC | 1 cut(s) | 1079 |
| TseI | GCWGC | 2 cut(s) | 455, 572 |
| Tsp45I | GTSAC | 1 cut(s) | 1079 |
| TspDTI | ATGAA | 5 cut(s) | 14, 234, 257, 302, 479 |
| TspGWI | ACGGA | 2 cut(s) | 855, 981 |
| VpaK11BI | GGWCC | 3 cut(s) | 462, 650, 1316 |
| XapI | RAATTY | 4 cut(s) | 264, 756, 1129, 1310 |
| XbaI | TCTAGA | 1 cut(s) | 202 |
| XceI | RCATGY | 1 cut(s) | 1205 |
| XmiI | GTMKAC | 1 cut(s) | 957 |
| XmnI | GAANNNNTTC | 2 cut(s) | 439, 939 |
| XspI | CTAG | 6 cut(s) | 203, 336, 561, 770, 1107, 1251 |
| Zsp2I | ATGCAT | 1 cut(s) | 78 |