One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATCG00680 |
| malus_domestica | MD00G1121600.v1.1 |
| prunus_persica | Prupe.7G029800_v2.0.a1 |
| pyrus_communis | pycom05g10070 |
| rosa_chinensis | RchiOBHm_Chr6g0260471 RchiOBHm_CPg0501971 |
| rosa_laevigata | RLG00000000054 RLG00000000070 RLG00000000176 RLG00000000220 RLG00000000266 RLG00000033771 RLG00000037104 |
| rosa_multiflora | Rmu_sc0001010.1_g000065 Rmu_sc0004517.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00107490 Rroxscaffold_2G00119020 Rroxscaffold_2G00119180 Rroxscaffold_3G00233680 |
| rosa_rugosa | RorugMtG0002600 |
| rosa_samantha | Rh2CG305200 Rh2DG341500 Rh7AG405500 Rh7CG423100 |
| rosa_wichuraiana | Rw7G013590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 4 cut(s) | 100, 167, 526, 558 |
| AccIII | TCCGGA | 2 cut(s) | 220, 417 |
| AclWI | GGATC | 4 cut(s) | 5, 18, 377, 417 |
| AcoI | YGGCCR | 1 cut(s) | 209 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 33, 166 |
| AgsI | TTSAA | 1 cut(s) | 22 |
| AjiI | CACGTC | 1 cut(s) | 319 |
| AjnI | CCWGG | 2 cut(s) | 249, 308 |
| Alw26I | GTCTC | 1 cut(s) | 42 |
| AlwI | GGATC | 4 cut(s) | 5, 18, 377, 417 |
| Ama87I | CYCGRG | 1 cut(s) | 182 |
| Aor13HI | TCCGGA | 2 cut(s) | 220, 417 |
| AoxI | GGCC | 3 cut(s) | 156, 171, 209 |
| ApeKI | GCWGC | 3 cut(s) | 325, 355, 466 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 425 |
| AspLEI | GCGC | 3 cut(s) | 495, 558, 560 |
| AspS9I | GGNCC | 2 cut(s) | 157, 433 |
| AsuC2I | CCSGG | 2 cut(s) | 155, 208 |
| AvaI | CYCGRG | 1 cut(s) | 182 |
| AvaII | GGWCC | 1 cut(s) | 433 |
| BamHI | GGATCC | 1 cut(s) | 10 |
| BanII | GRGCYC | 1 cut(s) | 189 |
| BbvCI | CCTCAGC | 1 cut(s) | 405 |
| BbvI | GCAGC | 3 cut(s) | 337, 342, 478 |
| BccI | CCATC | 2 cut(s) | 281, 386 |
| BciT130I | CCWGG | 2 cut(s) | 251, 310 |
| BcnI | CCSGG | 2 cut(s) | 155, 208 |
| BcoDI | GTCTC | 1 cut(s) | 42 |
| BfmI | CTRYAG | 1 cut(s) | 287 |
| BfoI | RGCGCY | 1 cut(s) | 496 |
| BisI | GCNGC | 6 cut(s) | 108, 326, 356, 378, 467, 491 |
| BlsI | GCNGC | 6 cut(s) | 109, 327, 357, 379, 468, 492 |
| Bme1390I | CCNGG | 4 cut(s) | 155, 208, 251, 310 |
| Bme18I | GGWCC | 1 cut(s) | 433 |
| BmeT110I | CYCGRG | 1 cut(s) | 182 |
| BmgBI | CACGTC | 1 cut(s) | 319 |
| BmgT120I | GGNCC | 2 cut(s) | 157, 433 |
| BmiI | GGNNCC | 3 cut(s) | 12, 159, 180 |
| BmrFI | CCNGG | 4 cut(s) | 155, 208, 251, 310 |
| BoxI | GACNNNNGTC | 1 cut(s) | 579 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 176, 208 |
| BpmI | CTGGAG | 1 cut(s) | 331 |
| Bpu10I | CCTNAGC | 1 cut(s) | 405 |
| BpuMI | CCSGG | 2 cut(s) | 155, 208 |
| BsaBI | GATNNNNATC | 1 cut(s) | 396 |
| BsaI | GGTCTC | 1 cut(s) | 42 |
| BsaJI | CCNNGG | 4 cut(s) | 98, 165, 174, 206 |
| BsaWI | WCCGGW | 2 cut(s) | 220, 417 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 33, 166 |
| Bse1I | ACTGG | 1 cut(s) | 231 |
| Bse8I | GATNNNNATC | 1 cut(s) | 396 |
| BseAI | TCCGGA | 2 cut(s) | 220, 417 |
| BseBI | CCWGG | 2 cut(s) | 251, 310 |
| BseDI | CCNNGG | 4 cut(s) | 98, 165, 174, 206 |
| BseGI | GGATG | 1 cut(s) | 414 |
| BseJI | GATNNNNATC | 1 cut(s) | 396 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 33, 166 |
| BseMII | CTCAG | 4 cut(s) | 53, 338, 396, 495 |
| BseNI | ACTGG | 1 cut(s) | 231 |
| BsePI | GCGCGC | 1 cut(s) | 556 |
| BseX3I | CGGCCG | 1 cut(s) | 209 |
| BseXI | GCAGC | 3 cut(s) | 337, 342, 478 |
| Bsh1236I | CGCG | 4 cut(s) | 100, 167, 526, 558 |
| Bsh1285I | CGRYCG | 1 cut(s) | 212 |
| BshFI | GGCC | 3 cut(s) | 158, 173, 211 |
| BsiEI | CGRYCG | 1 cut(s) | 212 |
| BsiHKCI | CYCGRG | 1 cut(s) | 182 |
| BsiSI | CCGG | 5 cut(s) | 155, 208, 212, 221, 418 |
| BslFI | GGGAC | 2 cut(s) | 329, 473 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 33, 166 |
| BsmAI | GTCTC | 1 cut(s) | 42 |
| BsmFI | GGGAC | 2 cut(s) | 329, 473 |
| BsmI | GAATGC | 1 cut(s) | 357 |
| BsnI | GGCC | 3 cut(s) | 158, 173, 211 |
| Bso31I | GGTCTC | 1 cut(s) | 42 |
| BsoBI | CYCGRG | 1 cut(s) | 182 |
| Bsp1286I | GDGCHC | 1 cut(s) | 189 |
| Bsp13I | TCCGGA | 2 cut(s) | 220, 417 |
| Bsp143I | GATC | 3 cut(s) | 10, 369, 409 |
| BspANI | GGCC | 3 cut(s) | 158, 173, 211 |
| BspCNI | CTCAG | 4 cut(s) | 52, 339, 397, 496 |
| BspEI | TCCGGA | 2 cut(s) | 220, 417 |
| BspFNI | CGCG | 4 cut(s) | 100, 167, 526, 558 |
| BspLI | GGNNCC | 3 cut(s) | 12, 159, 180 |
| BspMAI | CTGCAG | 1 cut(s) | 291 |
| BspPI | GGATC | 4 cut(s) | 5, 18, 377, 417 |
| BspTNI | GGTCTC | 1 cut(s) | 42 |
| BsrI | ACTGG | 1 cut(s) | 231 |
| BssECI | CCNNGG | 4 cut(s) | 98, 165, 174, 206 |
| BssHII | GCGCGC | 1 cut(s) | 556 |
| BssMI | GATC | 3 cut(s) | 10, 369, 409 |
| Bst2UI | CCWGG | 2 cut(s) | 251, 310 |
| Bst4CI | ACNGT | 2 cut(s) | 63, 426 |
| BstC8I | GCNNGC | 2 cut(s) | 165, 558 |
| BstDEI | CTNAG | 4 cut(s) | 39, 347, 405, 504 |
| BstDSI | CCRYGG | 2 cut(s) | 98, 165 |
| BstF5I | GGATG | 1 cut(s) | 414 |
| BstFNI | CGCG | 4 cut(s) | 100, 167, 526, 558 |
| BstH2I | RGCGCY | 1 cut(s) | 496 |
| BstHHI | GCGC | 3 cut(s) | 495, 558, 560 |
| BstKTI | GATC | 3 cut(s) | 13, 372, 412 |
| BstMAI | GTCTC | 1 cut(s) | 42 |
| BstMBI | GATC | 3 cut(s) | 10, 369, 409 |
| BstMCI | CGRYCG | 1 cut(s) | 212 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 164, 352 |
| BstNI | CCWGG | 2 cut(s) | 251, 310 |
| BstNSI | RCATGY | 1 cut(s) | 340 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 579 |
| BstSCI | CCNGG | 4 cut(s) | 153, 206, 249, 308 |
| BstSFI | CTRYAG | 1 cut(s) | 287 |
| BstUI | CGCG | 4 cut(s) | 100, 167, 526, 558 |
| BstV1I | GCAGC | 3 cut(s) | 337, 342, 478 |
| BstX2I | RGATCY | 2 cut(s) | 10, 409 |
| BstYI | RGATCY | 2 cut(s) | 10, 409 |
| BstZI | CGGCCG | 1 cut(s) | 209 |
| BsuRI | GGCC | 3 cut(s) | 158, 173, 211 |
| BtgI | CCRYGG | 2 cut(s) | 98, 165 |
| BtgZI | GCGATG | 1 cut(s) | 405 |
| BtrI | CACGTC | 1 cut(s) | 319 |
| BtsCI | GGATG | 1 cut(s) | 414 |
| Cac8I | GCNNGC | 2 cut(s) | 165, 558 |
| CfoI | GCGC | 3 cut(s) | 495, 558, 560 |
| Cfr13I | GGNCC | 2 cut(s) | 157, 433 |
| Cfr42I | CCGCGG | 2 cut(s) | 101, 168 |
| CseI | GACGC | 1 cut(s) | 331 |
| CviAII | CATG | 2 cut(s) | 241, 337 |
| CviJI | RGCY | 7 cut(s) | 110, 158, 173, 187, 211, 377, 469 |
| CviKI_1 | RGCY | 7 cut(s) | 110, 158, 173, 187, 211, 377, 469 |
| DdeI | CTNAG | 4 cut(s) | 39, 347, 405, 504 |
| DpnI | GATC | 3 cut(s) | 12, 371, 411 |
| DpnII | GATC | 3 cut(s) | 10, 369, 409 |
| EaeI | YGGCCR | 1 cut(s) | 209 |
| EagI | CGGCCG | 1 cut(s) | 209 |
| EciI | GGCGGA | 1 cut(s) | 186 |
| EclXI | CGGCCG | 1 cut(s) | 209 |
| Eco24I | GRGCYC | 1 cut(s) | 189 |
| Eco31I | GGTCTC | 1 cut(s) | 42 |
| Eco47I | GGWCC | 1 cut(s) | 433 |
| Eco52I | CGGCCG | 1 cut(s) | 209 |
| Eco88I | CYCGRG | 1 cut(s) | 182 |
| EcoRII | CCWGG | 2 cut(s) | 249, 308 |
| EcoT38I | GRGCYC | 1 cut(s) | 189 |
| FaeI | CATG | 2 cut(s) | 244, 340 |
| FaiI | YATR | 4 cut(s) | 29, 31, 242, 338 |
| FaqI | GGGAC | 2 cut(s) | 329, 473 |
| FatI | CATG | 2 cut(s) | 240, 336 |
| FauI | CCCGC | 3 cut(s) | 105, 168, 172 |
| FauNDI | CATATG | 1 cut(s) | 29 |
| Fnu4HI | GCNGC | 6 cut(s) | 108, 326, 356, 378, 467, 491 |
| FokI | GGATG | 1 cut(s) | 401 |
| FriOI | GRGCYC | 1 cut(s) | 189 |
| Fsp4HI | GCNGC | 6 cut(s) | 108, 326, 356, 378, 467, 491 |
| GlaI | GCGC | 3 cut(s) | 494, 557, 559 |
| GluI | GCNGC | 6 cut(s) | 108, 326, 356, 378, 467, 491 |
| GsuI | CTGGAG | 1 cut(s) | 331 |
| HaeII | RGCGCY | 1 cut(s) | 496 |
| HaeIII | GGCC | 3 cut(s) | 158, 173, 211 |
| HapII | CCGG | 5 cut(s) | 155, 208, 212, 221, 418 |
| HgaI | GACGC | 1 cut(s) | 331 |
| HhaI | GCGC | 3 cut(s) | 495, 558, 560 |
| Hin1II | CATG | 2 cut(s) | 244, 340 |
| Hin6I | GCGC | 3 cut(s) | 493, 556, 558 |
| HinP1I | GCGC | 3 cut(s) | 493, 556, 558 |
| HinfI | GANTC | 1 cut(s) | 217 |
| HpaII | CCGG | 5 cut(s) | 155, 208, 212, 221, 418 |
| Hpy188I | TCNGA | 4 cut(s) | 478, 505, 546, 574 |
| Hpy188III | TCNNGA | 3 cut(s) | 182, 221, 418 |
| HpyAV | CCTTC | 1 cut(s) | 77 |
| HpyCH4III | ACNGT | 2 cut(s) | 63, 426 |
| HpyCH4IV | ACGT | 2 cut(s) | 318, 441 |
| HpyCH4V | TGCA | 1 cut(s) | 289 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 164, 352 |
| HpyF3I | CTNAG | 4 cut(s) | 39, 347, 405, 504 |
| HpySE526I | ACGT | 2 cut(s) | 318, 441 |
| Hsp92II | CATG | 2 cut(s) | 244, 340 |
| HspAI | GCGC | 3 cut(s) | 493, 556, 558 |
| Kpn2I | TCCGGA | 2 cut(s) | 220, 417 |
| KspI | CCGCGG | 2 cut(s) | 101, 168 |
| Kzo9I | GATC | 3 cut(s) | 10, 369, 409 |
| Lsp1109I | GCAGC | 3 cut(s) | 337, 342, 478 |
| MaeII | ACGT | 2 cut(s) | 318, 441 |
| MaeIII | GTNAC | 2 cut(s) | 319, 437 |
| MalI | GATC | 3 cut(s) | 12, 371, 411 |
| MboI | GATC | 3 cut(s) | 10, 369, 409 |
| MboII | GAAGA | 1 cut(s) | 286 |
| MflI | RGATCY | 2 cut(s) | 10, 409 |
| MhlI | GDGCHC | 1 cut(s) | 189 |
| MluCI | AATT | 2 cut(s) | 126, 568 |
| MnlI | CCTC | 9 cut(s) | 147, 163, 169, 200, 248, 306, 400, 424, 450 |
| MroI | TCCGGA | 2 cut(s) | 220, 417 |
| MroXI | GAANNNNTTC | 1 cut(s) | 425 |
| MspA1I | CMGCKG | 2 cut(s) | 100, 167 |
| MspI | CCGG | 5 cut(s) | 155, 208, 212, 221, 418 |
| MspR9I | CCNGG | 4 cut(s) | 155, 208, 251, 310 |
| Mva1269I | GAATGC | 1 cut(s) | 357 |
| MvaI | CCWGG | 2 cut(s) | 251, 310 |
| MvnI | CGCG | 4 cut(s) | 100, 167, 526, 558 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 164, 352 |
| NciI | CCSGG | 2 cut(s) | 155, 208 |
| NdeI | CATATG | 1 cut(s) | 29 |
| NdeII | GATC | 3 cut(s) | 10, 369, 409 |
| NlaIII | CATG | 2 cut(s) | 244, 340 |
| NlaIV | GGNNCC | 3 cut(s) | 12, 159, 180 |
| NmeAIII | GCCGAG | 1 cut(s) | 199 |
| NmuCI | GTSAC | 2 cut(s) | 319, 437 |
| NspI | RCATGY | 1 cut(s) | 340 |
| PauI | GCGCGC | 1 cut(s) | 556 |
| PctI | GAATGC | 1 cut(s) | 357 |
| PdmI | GAANNNNTTC | 1 cut(s) | 425 |
| PfeI | GAWTC | 1 cut(s) | 217 |
| PkrI | GCNGC | 6 cut(s) | 109, 327, 357, 379, 468, 492 |
| PshAI | GACNNNNGTC | 1 cut(s) | 579 |
| Psp6I | CCWGG | 2 cut(s) | 249, 308 |
| PspGI | CCWGG | 2 cut(s) | 249, 308 |
| PspN4I | GGNNCC | 3 cut(s) | 12, 159, 180 |
| PspPI | GGNCC | 2 cut(s) | 157, 433 |
| PstI | CTGCAG | 1 cut(s) | 291 |
| PsuI | RGATCY | 2 cut(s) | 10, 409 |
| PteI | GCGCGC | 1 cut(s) | 556 |
| SacII | CCGCGG | 2 cut(s) | 101, 168 |
| SatI | GCNGC | 6 cut(s) | 108, 326, 356, 378, 467, 491 |
| Sau3AI | GATC | 3 cut(s) | 10, 369, 409 |
| Sau96I | GGNCC | 2 cut(s) | 157, 433 |
| ScrFI | CCNGG | 4 cut(s) | 155, 208, 251, 310 |
| SduI | GDGCHC | 1 cut(s) | 189 |
| SetI | ASST | 5 cut(s) | 139, 180, 321, 435, 444 |
| SfcI | CTRYAG | 1 cut(s) | 287 |
| Sfr303I | CCGCGG | 2 cut(s) | 101, 168 |
| SgrBI | CCGCGG | 2 cut(s) | 101, 168 |
| SinI | GGWCC | 1 cut(s) | 433 |
| Sse9I | AATT | 2 cut(s) | 126, 568 |
| StyD4I | CCNGG | 4 cut(s) | 153, 206, 249, 308 |
| TaaI | ACNGT | 2 cut(s) | 63, 426 |
| TaiI | ACGT | 2 cut(s) | 321, 444 |
| TaqI | TCGA | 5 cut(s) | 144, 246, 360, 372, 429 |
| TaqII | GACCGA | 1 cut(s) | 272 |
| TasI | AATT | 2 cut(s) | 126, 568 |
| TauI | GCSGC | 3 cut(s) | 110, 380, 493 |
| TfiI | GAWTC | 1 cut(s) | 217 |
| TseFI | GTSAC | 2 cut(s) | 319, 437 |
| TseI | GCWGC | 3 cut(s) | 325, 355, 466 |
| Tsp45I | GTSAC | 2 cut(s) | 319, 437 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 2 cut(s) | 382, 425 |
| VpaK11BI | GGWCC | 1 cut(s) | 433 |
| XceI | RCATGY | 1 cut(s) | 340 |
| XmnI | GAANNNNTTC | 1 cut(s) | 425 |