ZINC FINGER protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g47240 |
| malus_domestica | MD00G1156100.v1.1 MD09G1062700.v1.1 |
| prunus_persica | Prupe.3G257500_v2.0.a1 |
| pyrus_communis | pycom111g05300 pycom111g05310 pycom17g05670 |
| rosa_chinensis | RchiOBHm_Chr2g0166281 |
| rosa_laevigata | RLG00000021603 |
| rosa_multiflora | Rmu_sc0024214.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00085020 |
| rosa_rugosa | Rorug02G0521800 |
| rosa_samantha | Rh2AG587900 Rh2BG599900 Rh2CG570800 Rh2DG610100 |
| rosa_wichuraiana | Rw2G049000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 243 |
| Acc36I | ACCTGC | 1 cut(s) | 243 |
| AccB1I | GGYRCC | 1 cut(s) | 69 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1417 |
| AccBSI | CCGCTC | 1 cut(s) | 42 |
| AciI | CCGC | 2 cut(s) | 42, 227 |
| AclI | AACGTT | 1 cut(s) | 377 |
| AclWI | GGATC | 4 cut(s) | 684, 764, 1060, 1611 |
| AcoI | YGGCCR | 1 cut(s) | 1423 |
| AcsI | RAATTY | 6 cut(s) | 194, 608, 803, 860, 1006, 1257 |
| AcuI | CTGAAG | 3 cut(s) | 913, 1125, 1505 |
| AfaI | GTAC | 4 cut(s) | 488, 542, 855, 1289 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1417, 1460 |
| AgsI | TTSAA | 8 cut(s) | 140, 218, 456, 558, 734, 860, 1072, 1393 |
| AjnI | CCWGG | 4 cut(s) | 188, 739, 1562, 1570 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 960, 992 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 908, 940 |
| AluBI | AGCT | 8 cut(s) | 19, 33, 221, 386, 392, 466, 1043, 1300 |
| AluI | AGCT | 8 cut(s) | 19, 33, 221, 386, 392, 466, 1043, 1300 |
| Alw21I | GWGCWC | 3 cut(s) | 127, 1140, 1382 |
| Alw26I | GTCTC | 5 cut(s) | 437, 491, 841, 949, 1451 |
| AlwI | GGATC | 4 cut(s) | 684, 764, 1060, 1611 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 695 |
| Ama87I | CYCGRG | 1 cut(s) | 1454 |
| AoxI | GGCC | 6 cut(s) | 742, 950, 1189, 1408, 1423, 1568 |
| ApeKI | GCWGC | 3 cut(s) | 1043, 1331, 1489 |
| ApoI | RAATTY | 6 cut(s) | 194, 608, 803, 860, 1006, 1257 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 685, 1397 |
| AspLEI | GCGC | 1 cut(s) | 343 |
| AsuHPI | GGTGA | 2 cut(s) | 729, 1556 |
| AsuII | TTCGAA | 2 cut(s) | 372, 1277 |
| AvaI | CYCGRG | 1 cut(s) | 1454 |
| BaeGI | GKGCMC | 2 cut(s) | 207, 306 |
| BalI | TGGCCA | 1 cut(s) | 1425 |
| BanI | GGYRCC | 1 cut(s) | 69 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1271, 1303 |
| BbsI | GAAGAC | 3 cut(s) | 147, 693, 1349 |
| Bbv12I | GWGCWC | 3 cut(s) | 127, 1140, 1382 |
| BbvI | GCAGC | 3 cut(s) | 1030, 1343, 1501 |
| BccI | CCATC | 5 cut(s) | 428, 818, 1276, 1391, 1594 |
| BceAI | ACGGC | 1 cut(s) | 1512 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 69, 103, 1445, 1479 |
| BciT130I | CCWGG | 4 cut(s) | 190, 741, 1564, 1572 |
| BclI | TGATCA | 2 cut(s) | 148, 648 |
| BcoDI | GTCTC | 5 cut(s) | 437, 491, 841, 949, 1451 |
| BfaI | CTAG | 1 cut(s) | 573 |
| BfmI | CTRYAG | 1 cut(s) | 250 |
| BfuAI | ACCTGC | 1 cut(s) | 243 |
| BisI | GCNGC | 4 cut(s) | 43, 1044, 1332, 1490 |
| BlsI | GCNGC | 4 cut(s) | 44, 1045, 1333, 1491 |
| BmcAI | AGTACT | 1 cut(s) | 855 |
| Bme1390I | CCNGG | 4 cut(s) | 190, 741, 1564, 1572 |
| BmeT110I | CYCGRG | 1 cut(s) | 1454 |
| BmiI | GGNNCC | 1 cut(s) | 71 |
| BmrFI | CCNGG | 4 cut(s) | 190, 741, 1564, 1572 |
| BmsI | GCATC | 4 cut(s) | 322, 395, 1501, 1599 |
| BpiI | GAAGAC | 3 cut(s) | 147, 693, 1349 |
| Bpu14I | TTCGAA | 2 cut(s) | 372, 1277 |
| BpuEI | CTTGAG | 1 cut(s) | 58 |
| BsaJI | CCNNGG | 1 cut(s) | 73 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 26, 329, 359, 1364, 1394 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1417, 1460 |
| Bse1I | ACTGG | 1 cut(s) | 963 |
| BseBI | CCWGG | 4 cut(s) | 190, 741, 1564, 1572 |
| BseDI | CCNNGG | 1 cut(s) | 73 |
| BseGI | GGATG | 2 cut(s) | 967, 1042 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1417, 1460 |
| BseMII | CTCAG | 4 cut(s) | 90, 123, 333, 687 |
| BseNI | ACTGG | 1 cut(s) | 963 |
| BseSI | GKGCMC | 2 cut(s) | 207, 306 |
| BseXI | GCAGC | 3 cut(s) | 1030, 1343, 1501 |
| BsgI | GTGCAG | 4 cut(s) | 139, 277, 1165, 1485 |
| BshFI | GGCC | 6 cut(s) | 744, 952, 1191, 1410, 1425, 1570 |
| BshNI | GGYRCC | 1 cut(s) | 69 |
| BsiHKAI | GWGCWC | 3 cut(s) | 127, 1140, 1382 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1454 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1417, 1460 |
| BsmAI | GTCTC | 5 cut(s) | 437, 491, 841, 949, 1451 |
| BsmI | GAATGC | 2 cut(s) | 1046, 1319 |
| BsnI | GGCC | 6 cut(s) | 744, 952, 1191, 1410, 1425, 1570 |
| BsoBI | CYCGRG | 1 cut(s) | 1454 |
| Bsp119I | TTCGAA | 2 cut(s) | 372, 1277 |
| Bsp1286I | GDGCHC | 5 cut(s) | 127, 207, 306, 1140, 1382 |
| Bsp143I | GATC | 8 cut(s) | 148, 524, 648, 676, 756, 1052, 1519, 1603 |
| Bsp19I | CCATGG | 1 cut(s) | 73 |
| BspACI | CCGC | 2 cut(s) | 42, 227 |
| BspANI | GGCC | 6 cut(s) | 744, 952, 1191, 1410, 1425, 1570 |
| BspCNI | CTCAG | 4 cut(s) | 91, 124, 332, 688 |
| BspLI | GGNNCC | 1 cut(s) | 71 |
| BspMAI | CTGCAG | 1 cut(s) | 254 |
| BspMI | ACCTGC | 1 cut(s) | 243 |
| BspPI | GGATC | 4 cut(s) | 684, 764, 1060, 1611 |
| BspT104I | TTCGAA | 2 cut(s) | 372, 1277 |
| BspT107I | GGYRCC | 1 cut(s) | 69 |
| BsrBI | CCGCTC | 1 cut(s) | 42 |
| BsrI | ACTGG | 1 cut(s) | 963 |
| BssECI | CCNNGG | 1 cut(s) | 73 |
| BssMI | GATC | 8 cut(s) | 148, 524, 648, 676, 756, 1052, 1519, 1603 |
| BssT1I | CCWWGG | 1 cut(s) | 73 |
| Bst2UI | CCWGG | 4 cut(s) | 190, 741, 1564, 1572 |
| Bst4CI | ACNGT | 3 cut(s) | 448, 799, 1292 |
| Bst6I | CTCTTC | 2 cut(s) | 1332, 1464 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 21, 1152 |
| BstBI | TTCGAA | 2 cut(s) | 372, 1277 |
| BstC8I | GCNNGC | 5 cut(s) | 17, 468, 1148, 1298, 1302 |
| BstDEI | CTNAG | 6 cut(s) | 99, 132, 319, 594, 696, 1523 |
| BstDSI | CCRYGG | 1 cut(s) | 73 |
| BstF5I | GGATG | 2 cut(s) | 967, 1042 |
| BstHHI | GCGC | 1 cut(s) | 343 |
| BstKTI | GATC | 8 cut(s) | 151, 527, 651, 679, 759, 1055, 1522, 1606 |
| BstMAI | GTCTC | 5 cut(s) | 437, 491, 841, 949, 1451 |
| BstMBI | GATC | 8 cut(s) | 148, 524, 648, 676, 756, 1052, 1519, 1603 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 21, 30, 39, 310, 1152, 1306, 1386, 1489 |
| BstNI | CCWGG | 4 cut(s) | 190, 741, 1564, 1572 |
| BstNSI | RCATGY | 1 cut(s) | 11 |
| BstSCI | CCNGG | 4 cut(s) | 188, 739, 1562, 1570 |
| BstSFI | CTRYAG | 1 cut(s) | 250 |
| BstSLI | GKGCMC | 2 cut(s) | 207, 306 |
| BstV1I | GCAGC | 3 cut(s) | 1030, 1343, 1501 |
| BstV2I | GAAGAC | 3 cut(s) | 147, 693, 1349 |
| BstX2I | RGATCY | 1 cut(s) | 1603 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1228 |
| BstYI | RGATCY | 1 cut(s) | 1603 |
| BsuRI | GGCC | 6 cut(s) | 744, 952, 1191, 1410, 1425, 1570 |
| BtgI | CCRYGG | 1 cut(s) | 73 |
| BtgZI | GCGATG | 2 cut(s) | 308, 1524 |
| BtsCI | GGATG | 2 cut(s) | 967, 1042 |
| BtsI | GCAGTG | 2 cut(s) | 499, 1324 |
| BtsIMutI | CAGTG | 5 cut(s) | 499, 586, 603, 693, 1324 |
| BveI | ACCTGC | 1 cut(s) | 243 |
| Cac8I | GCNNGC | 5 cut(s) | 17, 468, 1148, 1298, 1302 |
| CaiI | CAGNNNCTG | 1 cut(s) | 695 |
| CfoI | GCGC | 1 cut(s) | 343 |
| Csp6I | GTAC | 4 cut(s) | 487, 541, 854, 1288 |
| CviAII | CATG | 5 cut(s) | 8, 64, 74, 307, 760 |
| CviQI | GTAC | 4 cut(s) | 487, 541, 854, 1288 |
| DdeI | CTNAG | 6 cut(s) | 99, 132, 319, 594, 696, 1523 |
| DpnI | GATC | 8 cut(s) | 150, 526, 650, 678, 758, 1054, 1521, 1605 |
| DpnII | GATC | 8 cut(s) | 148, 524, 648, 676, 756, 1052, 1519, 1603 |
| EaeI | YGGCCR | 1 cut(s) | 1423 |
| Eam1104I | CTCTTC | 2 cut(s) | 1332, 1464 |
| EarI | CTCTTC | 2 cut(s) | 1332, 1464 |
| Eco130I | CCWWGG | 1 cut(s) | 73 |
| Eco147I | AGGCCT | 1 cut(s) | 744 |
| Eco32I | GATATC | 1 cut(s) | 1015 |
| Eco57I | CTGAAG | 3 cut(s) | 913, 1125, 1505 |
| Eco88I | CYCGRG | 1 cut(s) | 1454 |
| EcoRI | GAATTC | 1 cut(s) | 1257 |
| EcoRII | CCWGG | 4 cut(s) | 188, 739, 1562, 1570 |
| EcoRV | GATATC | 1 cut(s) | 1015 |
| EcoT14I | CCWWGG | 1 cut(s) | 73 |
| EcoT22I | ATGCAT | 1 cut(s) | 1516 |
| ErhI | CCWWGG | 1 cut(s) | 73 |
| FaeI | CATG | 5 cut(s) | 11, 67, 77, 310, 763 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 20, 52, 550, 582 |
| FatI | CATG | 5 cut(s) | 7, 63, 73, 306, 759 |
| FauI | CCCGC | 1 cut(s) | 220 |
| FbaI | TGATCA | 2 cut(s) | 148, 648 |
| Fnu4HI | GCNGC | 4 cut(s) | 43, 1044, 1332, 1490 |
| FokI | GGATG | 2 cut(s) | 974, 1049 |
| Fsp4HI | GCNGC | 4 cut(s) | 43, 1044, 1332, 1490 |
| FspBI | CTAG | 1 cut(s) | 573 |
| GlaI | GCGC | 1 cut(s) | 342 |
| GluI | GCNGC | 4 cut(s) | 43, 1044, 1332, 1490 |
| HaeIII | GGCC | 6 cut(s) | 744, 952, 1191, 1410, 1425, 1570 |
| HhaI | GCGC | 1 cut(s) | 343 |
| Hin1II | CATG | 5 cut(s) | 11, 67, 77, 310, 763 |
| Hin6I | GCGC | 1 cut(s) | 341 |
| HinP1I | GCGC | 1 cut(s) | 341 |
| HincII | GTYRAC | 1 cut(s) | 844 |
| HindII | GTYRAC | 1 cut(s) | 844 |
| HindIII | AAGCTT | 3 cut(s) | 219, 464, 1298 |
| HinfI | GANTC | 8 cut(s) | 48, 511, 590, 698, 968, 1100, 1118, 1472 |
| HphI | GGTGA | 2 cut(s) | 729, 1556 |
| Hpy166II | GTNNAC | 3 cut(s) | 175, 844, 1204 |
| Hpy188I | TCNGA | 9 cut(s) | 133, 516, 706, 823, 1052, 1105, 1263, 1501, 1608 |
| Hpy188III | TCNNGA | 2 cut(s) | 37, 1476 |
| Hpy8I | GTNNAC | 3 cut(s) | 175, 844, 1204 |
| HpyAV | CCTTC | 2 cut(s) | 328, 1387 |
| HpyCH4III | ACNGT | 3 cut(s) | 448, 799, 1292 |
| HpyCH4IV | ACGT | 1 cut(s) | 377 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 21, 30, 39, 310, 1152, 1306, 1386, 1489 |
| HpyF3I | CTNAG | 6 cut(s) | 99, 132, 319, 594, 696, 1523 |
| HpySE526I | ACGT | 1 cut(s) | 377 |
| Hsp92II | CATG | 5 cut(s) | 11, 67, 77, 310, 763 |
| HspAI | GCGC | 1 cut(s) | 341 |
| Ksp22I | TGATCA | 2 cut(s) | 148, 648 |
| Kzo9I | GATC | 8 cut(s) | 148, 524, 648, 676, 756, 1052, 1519, 1603 |
| LmnI | GCTCC | 3 cut(s) | 4, 77, 1385 |
| Lsp1109I | GCAGC | 3 cut(s) | 1030, 1343, 1501 |
| LweI | GCATC | 4 cut(s) | 322, 395, 1501, 1599 |
| MaeI | CTAG | 1 cut(s) | 573 |
| MaeII | ACGT | 1 cut(s) | 377 |
| MaeIII | GTNAC | 4 cut(s) | 59, 601, 691, 1370 |
| MalI | GATC | 8 cut(s) | 150, 526, 650, 678, 758, 1054, 1521, 1605 |
| MbiI | CCGCTC | 1 cut(s) | 42 |
| MboI | GATC | 8 cut(s) | 148, 524, 648, 676, 756, 1052, 1519, 1603 |
| MfeI | CAATTG | 1 cut(s) | 670 |
| MflI | RGATCY | 1 cut(s) | 1603 |
| MhlI | GDGCHC | 5 cut(s) | 127, 207, 306, 1140, 1382 |
| MlsI | TGGCCA | 1 cut(s) | 1425 |
| MluNI | TGGCCA | 1 cut(s) | 1425 |
| MlyI | GAGTC | 3 cut(s) | 57, 707, 1481 |
| MmeI | TCCRAC | 1 cut(s) | 1524 |
| Mox20I | TGGCCA | 1 cut(s) | 1425 |
| Mph1103I | ATGCAT | 1 cut(s) | 1516 |
| MroXI | GAANNNNTTC | 2 cut(s) | 685, 1397 |
| MscI | TGGCCA | 1 cut(s) | 1425 |
| MseI | TTAA | 3 cut(s) | 585, 1266, 1557 |
| Msp20I | TGGCCA | 1 cut(s) | 1425 |
| MspR9I | CCNGG | 4 cut(s) | 190, 741, 1564, 1572 |
| MunI | CAATTG | 1 cut(s) | 670 |
| Mva1269I | GAATGC | 2 cut(s) | 1046, 1319 |
| MvaI | CCWGG | 4 cut(s) | 190, 741, 1564, 1572 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 21, 30, 39, 310, 1152, 1306, 1386, 1489 |
| NcoI | CCATGG | 1 cut(s) | 73 |
| NdeII | GATC | 8 cut(s) | 148, 524, 648, 676, 756, 1052, 1519, 1603 |
| NlaIII | CATG | 5 cut(s) | 11, 67, 77, 310, 763 |
| NlaIV | GGNNCC | 1 cut(s) | 71 |
| NmeAIII | GCCGAG | 1 cut(s) | 978 |
| NmuCI | GTSAC | 4 cut(s) | 59, 601, 691, 1370 |
| NsiI | ATGCAT | 1 cut(s) | 1516 |
| NspI | RCATGY | 1 cut(s) | 11 |
| NspV | TTCGAA | 2 cut(s) | 372, 1277 |
| PaqCI | CACCTGC | 1 cut(s) | 243 |
| PceI | AGGCCT | 1 cut(s) | 744 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 290 |
| PctI | GAATGC | 2 cut(s) | 1046, 1319 |
| PdmI | GAANNNNTTC | 2 cut(s) | 685, 1397 |
| PfeI | GAWTC | 5 cut(s) | 511, 590, 968, 1100, 1118 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1417 |
| PfoI | TCCNGGA | 1 cut(s) | 188 |
| PkrI | GCNGC | 4 cut(s) | 44, 1045, 1333, 1491 |
| PleI | GAGTC | 3 cut(s) | 56, 706, 1480 |
| PpsI | GAGTC | 3 cut(s) | 56, 706, 1480 |
| Psp1406I | AACGTT | 1 cut(s) | 377 |
| Psp6I | CCWGG | 4 cut(s) | 188, 739, 1562, 1570 |
| PspGI | CCWGG | 4 cut(s) | 188, 739, 1562, 1570 |
| PspN4I | GGNNCC | 1 cut(s) | 71 |
| PstI | CTGCAG | 1 cut(s) | 254 |
| PstNI | CAGNNNCTG | 1 cut(s) | 695 |
| PsuI | RGATCY | 1 cut(s) | 1603 |
| RsaI | GTAC | 4 cut(s) | 488, 542, 855, 1289 |
| RsaNI | GTAC | 4 cut(s) | 487, 541, 854, 1288 |
| SaqAI | TTAA | 3 cut(s) | 585, 1266, 1557 |
| SatI | GCNGC | 4 cut(s) | 43, 1044, 1332, 1490 |
| Sau3AI | GATC | 8 cut(s) | 148, 524, 648, 676, 756, 1052, 1519, 1603 |
| ScaI | AGTACT | 1 cut(s) | 855 |
| SchI | GAGTC | 3 cut(s) | 57, 707, 1481 |
| ScrFI | CCNGG | 4 cut(s) | 190, 741, 1564, 1572 |
| SduI | GDGCHC | 5 cut(s) | 127, 207, 306, 1140, 1382 |
| SfaNI | GCATC | 4 cut(s) | 322, 395, 1501, 1599 |
| SfcI | CTRYAG | 1 cut(s) | 250 |
| SfuI | TTCGAA | 2 cut(s) | 372, 1277 |
| SmlI | CTYRAG | 1 cut(s) | 37 |
| SmoI | CTYRAG | 1 cut(s) | 37 |
| SseBI | AGGCCT | 1 cut(s) | 744 |
| SsiI | CCGC | 2 cut(s) | 42, 227 |
| SspI | AATATT | 1 cut(s) | 1237 |
| SspMI | CTAG | 1 cut(s) | 573 |
| StuI | AGGCCT | 1 cut(s) | 744 |
| StyD4I | CCNGG | 4 cut(s) | 188, 739, 1562, 1570 |
| StyI | CCWWGG | 1 cut(s) | 73 |
| TaaI | ACNGT | 3 cut(s) | 448, 799, 1292 |
| TaiI | ACGT | 1 cut(s) | 380 |
| TatI | WGTACW | 3 cut(s) | 486, 853, 1287 |
| TauI | GCSGC | 1 cut(s) | 45 |
| TfiI | GAWTC | 5 cut(s) | 511, 590, 968, 1100, 1118 |
| Tru1I | TTAA | 3 cut(s) | 585, 1266, 1557 |
| Tru9I | TTAA | 3 cut(s) | 585, 1266, 1557 |
| TscAI | CASTG | 5 cut(s) | 499, 586, 610, 700, 1324 |
| TseFI | GTSAC | 4 cut(s) | 59, 601, 691, 1370 |
| TseI | GCWGC | 3 cut(s) | 1043, 1331, 1489 |
| Tsp45I | GTSAC | 4 cut(s) | 59, 601, 691, 1370 |
| TspDTI | ATGAA | 7 cut(s) | 269, 603, 1019, 1073, 1263, 1427, 1593 |
| TspGWI | ACGGA | 2 cut(s) | 929, 1361 |
| TspRI | CASTG | 5 cut(s) | 499, 586, 610, 700, 1324 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1417 |
| XapI | RAATTY | 6 cut(s) | 194, 608, 803, 860, 1006, 1257 |
| XceI | RCATGY | 1 cut(s) | 11 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1418 |
| XmnI | GAANNNNTTC | 2 cut(s) | 685, 1397 |
| XspI | CTAG | 1 cut(s) | 573 |
| ZrmI | AGTACT | 1 cut(s) | 855 |
| Zsp2I | ATGCAT | 1 cut(s) | 1516 |