ZINC FINGER protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g47240 |
| malus_domestica | MD00G1156100.v1.1 MD09G1062700.v1.1 |
| prunus_persica | Prupe.3G257500_v2.0.a1 |
| pyrus_communis | pycom111g05300 pycom111g05310 pycom17g05670 |
| rosa_chinensis | RchiOBHm_Chr2g0166281 |
| rosa_laevigata | RLG00000021603 |
| rosa_multiflora | Rmu_sc0024214.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00085020 |
| rosa_rugosa | Rorug02G0521800 |
| rosa_samantha | Rh2AG587900 Rh2BG599900 Rh2CG570800 Rh2DG610100 |
| rosa_wichuraiana | Rw2G049000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1402 |
| AccBSI | CCGCTC | 1 cut(s) | 1146 |
| AccII | CGCG | 1 cut(s) | 1587 |
| AccIII | TCCGGA | 1 cut(s) | 489 |
| AciI | CCGC | 2 cut(s) | 342, 1144 |
| AclWI | GGATC | 3 cut(s) | 427, 481, 719 |
| AcoI | YGGCCR | 1 cut(s) | 568 |
| AcsI | RAATTY | 7 cut(s) | 85, 194, 387, 563, 770, 1233, 1550 |
| AcuI | CTGAAG | 4 cut(s) | 642, 978, 1245, 1490 |
| AfaI | GTAC | 4 cut(s) | 518, 1072, 1265, 1294 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 241, 1402 |
| AflIII | ACRYGT | 1 cut(s) | 1059 |
| AjnI | CCWGG | 1 cut(s) | 1559 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 549, 581 |
| AleI | CACNNNNGTG | 1 cut(s) | 959 |
| Alw21I | GWGCWC | 3 cut(s) | 370, 1367, 1468 |
| Alw26I | GTCTC | 3 cut(s) | 314, 467, 1436 |
| AlwI | GGATC | 3 cut(s) | 427, 481, 719 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 650 |
| Ama87I | CYCGRG | 2 cut(s) | 37, 301 |
| Aor13HI | TCCGGA | 1 cut(s) | 489 |
| AoxI | GGCC | 6 cut(s) | 70, 163, 568, 869, 1165, 1393 |
| ApeKI | GCWGC | 1 cut(s) | 1474 |
| ApoI | RAATTY | 7 cut(s) | 85, 194, 387, 563, 770, 1233, 1550 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 640, 1139 |
| AspS9I | GGNCC | 1 cut(s) | 408 |
| AsuHPI | GGTGA | 3 cut(s) | 149, 788, 1553 |
| AvaI | CYCGRG | 2 cut(s) | 37, 301 |
| AvaII | GGWCC | 1 cut(s) | 408 |
| BalI | TGGCCA | 1 cut(s) | 570 |
| BanII | GRGCYC | 2 cut(s) | 370, 1019 |
| BbsI | GAAGAC | 1 cut(s) | 648 |
| Bbv12I | GWGCWC | 3 cut(s) | 370, 1367, 1468 |
| BbvI | GCAGC | 1 cut(s) | 1486 |
| BccI | CCATC | 6 cut(s) | 410, 578, 934, 956, 1312, 1376 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 134, 168 |
| BciT130I | CCWGG | 1 cut(s) | 1561 |
| BclI | TGATCA | 1 cut(s) | 603 |
| BcoDI | GTCTC | 3 cut(s) | 314, 467, 1436 |
| BfaI | CTAG | 2 cut(s) | 878, 1050 |
| BisI | GCNGC | 1 cut(s) | 1475 |
| BlsI | GCNGC | 1 cut(s) | 1476 |
| Bme1390I | CCNGG | 1 cut(s) | 1561 |
| Bme18I | GGWCC | 1 cut(s) | 408 |
| BmeT110I | CYCGRG | 2 cut(s) | 37, 301 |
| BmgT120I | GGNCC | 1 cut(s) | 408 |
| BmiI | GGNNCC | 1 cut(s) | 1018 |
| BmrFI | CCNGG | 1 cut(s) | 1561 |
| BmrI | ACTGGG | 1 cut(s) | 762 |
| BmsI | GCATC | 3 cut(s) | 304, 898, 1596 |
| BmuI | ACTGGG | 1 cut(s) | 762 |
| BpiI | GAAGAC | 1 cut(s) | 648 |
| BpmI | CTGGAG | 2 cut(s) | 595, 1224 |
| Bpu10I | CCTNAGC | 1 cut(s) | 404 |
| BpuEI | CTTGAG | 1 cut(s) | 1547 |
| BsaBI | GATNNNNATC | 1 cut(s) | 605 |
| BsaI | GGTCTC | 1 cut(s) | 467 |
| BsaJI | CCNNGG | 2 cut(s) | 73, 477 |
| BsaWI | WCCGGW | 1 cut(s) | 489 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 311, 341, 1349, 1379 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 241, 1402 |
| Bse1I | ACTGG | 6 cut(s) | 695, 757, 820, 1342, 1517, 1599 |
| Bse8I | GATNNNNATC | 1 cut(s) | 605 |
| BseAI | TCCGGA | 1 cut(s) | 489 |
| BseBI | CCWGG | 1 cut(s) | 1561 |
| BseDI | CCNNGG | 2 cut(s) | 73, 477 |
| BseGI | GGATG | 4 cut(s) | 589, 948, 976, 1006 |
| BseJI | GATNNNNATC | 1 cut(s) | 605 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 241, 1402 |
| BseMII | CTCAG | 7 cut(s) | 213, 338, 418, 462, 642, 903, 1431 |
| BseNI | ACTGG | 6 cut(s) | 695, 757, 820, 1342, 1517, 1599 |
| BseRI | GAGGAG | 1 cut(s) | 1322 |
| BseXI | GCAGC | 1 cut(s) | 1486 |
| BsgI | GTGCAG | 2 cut(s) | 876, 1141 |
| Bsh1236I | CGCG | 1 cut(s) | 1587 |
| BshFI | GGCC | 6 cut(s) | 72, 165, 570, 871, 1167, 1395 |
| BsiHKAI | GWGCWC | 3 cut(s) | 370, 1367, 1468 |
| BsiHKCI | CYCGRG | 2 cut(s) | 37, 301 |
| BsiSI | CCGG | 1 cut(s) | 490 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 241, 1402 |
| BsmAI | GTCTC | 3 cut(s) | 314, 467, 1436 |
| BsnI | GGCC | 6 cut(s) | 72, 165, 570, 871, 1167, 1395 |
| Bso31I | GGTCTC | 1 cut(s) | 467 |
| BsoBI | CYCGRG | 2 cut(s) | 37, 301 |
| Bsp1286I | GDGCHC | 4 cut(s) | 370, 1019, 1367, 1468 |
| Bsp13I | TCCGGA | 1 cut(s) | 489 |
| Bsp143I | GATC | 6 cut(s) | 419, 486, 500, 522, 603, 711 |
| Bsp19I | CCATGG | 2 cut(s) | 73, 477 |
| BspACI | CCGC | 2 cut(s) | 342, 1144 |
| BspANI | GGCC | 6 cut(s) | 72, 165, 570, 871, 1167, 1395 |
| BspCNI | CTCAG | 7 cut(s) | 214, 337, 417, 463, 643, 904, 1432 |
| BspEI | TCCGGA | 1 cut(s) | 489 |
| BspFNI | CGCG | 1 cut(s) | 1587 |
| BspLI | GGNNCC | 1 cut(s) | 1018 |
| BspPI | GGATC | 3 cut(s) | 427, 481, 719 |
| BspQI | GCTCTTC | 1 cut(s) | 987 |
| BspTNI | GGTCTC | 1 cut(s) | 467 |
| BsrBI | CCGCTC | 1 cut(s) | 1146 |
| BsrI | ACTGG | 6 cut(s) | 695, 757, 820, 1342, 1517, 1599 |
| BssECI | CCNNGG | 2 cut(s) | 73, 477 |
| BssMI | GATC | 6 cut(s) | 419, 486, 500, 522, 603, 711 |
| BssT1I | CCWWGG | 2 cut(s) | 73, 477 |
| Bst2UI | CCWGG | 1 cut(s) | 1561 |
| Bst4CI | ACNGT | 3 cut(s) | 1199, 1268, 1333 |
| Bst6I | CTCTTC | 2 cut(s) | 987, 1527 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 339, 1128 |
| BstC8I | GCNNGC | 4 cut(s) | 153, 1274, 1278, 1589 |
| BstDSI | CCRYGG | 2 cut(s) | 73, 477 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 239 |
| BstF5I | GGATG | 4 cut(s) | 589, 948, 976, 1006 |
| BstFNI | CGCG | 1 cut(s) | 1587 |
| BstKTI | GATC | 6 cut(s) | 422, 489, 503, 525, 606, 714 |
| BstMAI | GTCTC | 3 cut(s) | 314, 467, 1436 |
| BstMBI | GATC | 6 cut(s) | 419, 486, 500, 522, 603, 711 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 339, 374, 435, 1128, 1282, 1371 |
| BstNI | CCWGG | 1 cut(s) | 1561 |
| BstNSI | RCATGY | 2 cut(s) | 155, 1063 |
| BstSCI | CCNGG | 1 cut(s) | 1559 |
| BstUI | CGCG | 1 cut(s) | 1587 |
| BstV1I | GCAGC | 1 cut(s) | 1486 |
| BstV2I | GAAGAC | 1 cut(s) | 648 |
| BsuRI | GGCC | 6 cut(s) | 72, 165, 570, 871, 1167, 1395 |
| BtgI | CCRYGG | 2 cut(s) | 73, 477 |
| BtgZI | GCGATG | 1 cut(s) | 1509 |
| BtsCI | GGATG | 4 cut(s) | 589, 948, 976, 1006 |
| BtsIMutI | CAGTG | 4 cut(s) | 332, 468, 954, 1466 |
| Cac8I | GCNNGC | 4 cut(s) | 153, 1274, 1278, 1589 |
| CaiI | CAGNNNCTG | 1 cut(s) | 650 |
| Cfr13I | GGNCC | 1 cut(s) | 408 |
| Csp6I | GTAC | 4 cut(s) | 517, 1071, 1264, 1293 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 229, 264 |
| CviQI | GTAC | 4 cut(s) | 517, 1071, 1264, 1293 |
| DpnI | GATC | 6 cut(s) | 421, 488, 502, 524, 605, 713 |
| DpnII | GATC | 6 cut(s) | 419, 486, 500, 522, 603, 711 |
| EaeI | YGGCCR | 1 cut(s) | 568 |
| Eam1104I | CTCTTC | 2 cut(s) | 987, 1527 |
| EarI | CTCTTC | 2 cut(s) | 987, 1527 |
| Ecl136II | GAGCTC | 1 cut(s) | 368 |
| Eco130I | CCWWGG | 2 cut(s) | 73, 477 |
| Eco147I | AGGCCT | 1 cut(s) | 871 |
| Eco24I | GRGCYC | 2 cut(s) | 370, 1019 |
| Eco31I | GGTCTC | 1 cut(s) | 467 |
| Eco47I | GGWCC | 1 cut(s) | 408 |
| Eco53kI | GAGCTC | 1 cut(s) | 368 |
| Eco57I | CTGAAG | 4 cut(s) | 642, 978, 1245, 1490 |
| Eco88I | CYCGRG | 2 cut(s) | 37, 301 |
| EcoICRI | GAGCTC | 1 cut(s) | 368 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 239 |
| EcoO109I | RGGNCCY | 1 cut(s) | 408 |
| EcoRI | GAATTC | 2 cut(s) | 85, 1550 |
| EcoRII | CCWGG | 1 cut(s) | 1559 |
| EcoT14I | CCWWGG | 2 cut(s) | 73, 477 |
| EcoT38I | GRGCYC | 2 cut(s) | 370, 1019 |
| ErhI | CCWWGG | 2 cut(s) | 73, 477 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 523, 555 |
| FbaI | TGATCA | 1 cut(s) | 603 |
| Fnu4HI | GCNGC | 1 cut(s) | 1475 |
| FokI | GGATG | 4 cut(s) | 596, 935, 983, 1013 |
| FriOI | GRGCYC | 2 cut(s) | 370, 1019 |
| Fsp4HI | GCNGC | 1 cut(s) | 1475 |
| FspBI | CTAG | 2 cut(s) | 878, 1050 |
| GluI | GCNGC | 1 cut(s) | 1475 |
| GsuI | CTGGAG | 2 cut(s) | 595, 1224 |
| HaeIII | GGCC | 6 cut(s) | 72, 165, 570, 871, 1167, 1395 |
| HapII | CCGG | 1 cut(s) | 490 |
| HincII | GTYRAC | 1 cut(s) | 1514 |
| HindII | GTYRAC | 1 cut(s) | 1514 |
| HindIII | AAGCTT | 7 cut(s) | 216, 443, 1136, 1247, 1274, 1283, 1398 |
| HpaII | CCGG | 1 cut(s) | 490 |
| HphI | GGTGA | 3 cut(s) | 149, 788, 1553 |
| Hpy166II | GTNNAC | 3 cut(s) | 175, 1357, 1514 |
| Hpy188III | TCNNGA | 5 cut(s) | 37, 406, 490, 612, 1203 |
| Hpy8I | GTNNAC | 3 cut(s) | 175, 1357, 1514 |
| HpyAV | CCTTC | 4 cut(s) | 128, 310, 916, 1030 |
| HpyCH4III | ACNGT | 3 cut(s) | 1199, 1268, 1333 |
| HpyCH4IV | ACGT | 1 cut(s) | 123 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 339, 374, 435, 1128, 1282, 1371 |
| HpySE526I | ACGT | 1 cut(s) | 123 |
| Kpn2I | TCCGGA | 1 cut(s) | 489 |
| Ksp22I | TGATCA | 1 cut(s) | 603 |
| Kzo9I | GATC | 6 cut(s) | 419, 486, 500, 522, 603, 711 |
| LguI | GCTCTTC | 1 cut(s) | 987 |
| LmnI | GCTCC | 4 cut(s) | 4, 1022, 1309, 1370 |
| Lsp1109I | GCAGC | 1 cut(s) | 1486 |
| LweI | GCATC | 3 cut(s) | 304, 898, 1596 |
| MaeI | CTAG | 2 cut(s) | 878, 1050 |
| MaeII | ACGT | 1 cut(s) | 123 |
| MaeIII | GTNAC | 6 cut(s) | 59, 284, 646, 1003, 1333, 1409 |
| MalI | GATC | 6 cut(s) | 421, 488, 502, 524, 605, 713 |
| MbiI | CCGCTC | 1 cut(s) | 1146 |
| MboI | GATC | 6 cut(s) | 419, 486, 500, 522, 603, 711 |
| MboII | GAAGA | 8 cut(s) | 528, 648, 1001, 1004, 1114, 1222, 1238, 1544 |
| MfeI | CAATTG | 1 cut(s) | 625 |
| MhlI | GDGCHC | 4 cut(s) | 370, 1019, 1367, 1468 |
| MlsI | TGGCCA | 1 cut(s) | 570 |
| MluNI | TGGCCA | 1 cut(s) | 570 |
| MlyI | GAGTC | 4 cut(s) | 316, 365, 662, 1214 |
| Mox20I | TGGCCA | 1 cut(s) | 570 |
| MroI | TCCGGA | 1 cut(s) | 489 |
| MroXI | GAANNNNTTC | 2 cut(s) | 640, 1139 |
| MscI | TGGCCA | 1 cut(s) | 570 |
| MseI | TTAA | 3 cut(s) | 512, 1242, 1376 |
| MslI | CAYNNNNRTG | 1 cut(s) | 959 |
| Msp20I | TGGCCA | 1 cut(s) | 570 |
| MspI | CCGG | 1 cut(s) | 490 |
| MspR9I | CCNGG | 1 cut(s) | 1561 |
| MunI | CAATTG | 1 cut(s) | 625 |
| MvaI | CCWGG | 1 cut(s) | 1561 |
| MvnI | CGCG | 1 cut(s) | 1587 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 339, 374, 435, 1128, 1282, 1371 |
| NcoI | CCATGG | 2 cut(s) | 73, 477 |
| NdeII | GATC | 6 cut(s) | 419, 486, 500, 522, 603, 711 |
| NlaIV | GGNNCC | 1 cut(s) | 1018 |
| NmuCI | GTSAC | 4 cut(s) | 59, 284, 1333, 1409 |
| NspI | RCATGY | 2 cut(s) | 155, 1063 |
| OliI | CACNNNNGTG | 1 cut(s) | 959 |
| PaeI | GCATGC | 1 cut(s) | 155 |
| PaeR7I | CTCGAG | 2 cut(s) | 37, 301 |
| PceI | AGGCCT | 1 cut(s) | 871 |
| PciI | ACATGT | 1 cut(s) | 1059 |
| PciSI | GCTCTTC | 1 cut(s) | 987 |
| PdmI | GAANNNNTTC | 2 cut(s) | 640, 1139 |
| PfeI | GAWTC | 9 cut(s) | 263, 557, 706, 785, 887, 1046, 1076, 1094, 1436 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1402 |
| PkrI | GCNGC | 1 cut(s) | 1476 |
| PleI | GAGTC | 4 cut(s) | 316, 364, 661, 1214 |
| PpsI | GAGTC | 4 cut(s) | 316, 364, 661, 1214 |
| PpuMI | RGGWCCY | 1 cut(s) | 408 |
| PscI | ACATGT | 1 cut(s) | 1059 |
| Psp124BI | GAGCTC | 1 cut(s) | 370 |
| Psp5II | RGGWCCY | 1 cut(s) | 408 |
| Psp6I | CCWGG | 1 cut(s) | 1559 |
| PspGI | CCWGG | 1 cut(s) | 1559 |
| PspN4I | GGNNCC | 1 cut(s) | 1018 |
| PspPI | GGNCC | 1 cut(s) | 408 |
| PspPPI | RGGWCCY | 1 cut(s) | 408 |
| PspXI | VCTCGAGB | 1 cut(s) | 301 |
| PstNI | CAGNNNCTG | 1 cut(s) | 650 |
| RsaI | GTAC | 4 cut(s) | 518, 1072, 1265, 1294 |
| RsaNI | GTAC | 4 cut(s) | 517, 1071, 1264, 1293 |
| RseI | CAYNNNNRTG | 1 cut(s) | 959 |
| SacI | GAGCTC | 1 cut(s) | 370 |
| SapI | GCTCTTC | 1 cut(s) | 987 |
| SaqAI | TTAA | 3 cut(s) | 512, 1242, 1376 |
| SatI | GCNGC | 1 cut(s) | 1475 |
| Sau3AI | GATC | 6 cut(s) | 419, 486, 500, 522, 603, 711 |
| Sau96I | GGNCC | 1 cut(s) | 408 |
| SchI | GAGTC | 4 cut(s) | 316, 365, 662, 1214 |
| ScrFI | CCNGG | 1 cut(s) | 1561 |
| SduI | GDGCHC | 4 cut(s) | 370, 1019, 1367, 1468 |
| SfaNI | GCATC | 3 cut(s) | 304, 898, 1596 |
| Sfr274I | CTCGAG | 2 cut(s) | 37, 301 |
| SinI | GGWCC | 1 cut(s) | 408 |
| SlaI | CTCGAG | 2 cut(s) | 37, 301 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 959 |
| SmlI | CTYRAG | 3 cut(s) | 37, 301, 1526 |
| SmoI | CTYRAG | 3 cut(s) | 37, 301, 1526 |
| SphI | GCATGC | 1 cut(s) | 155 |
| SseBI | AGGCCT | 1 cut(s) | 871 |
| SsiI | CCGC | 2 cut(s) | 342, 1144 |
| SspI | AATATT | 1 cut(s) | 765 |
| SspMI | CTAG | 2 cut(s) | 878, 1050 |
| SstI | GAGCTC | 1 cut(s) | 370 |
| StuI | AGGCCT | 1 cut(s) | 871 |
| StyD4I | CCNGG | 1 cut(s) | 1559 |
| StyI | CCWWGG | 2 cut(s) | 73, 477 |
| TaaI | ACNGT | 3 cut(s) | 1199, 1268, 1333 |
| TaiI | ACGT | 1 cut(s) | 126 |
| TaqI | TCGA | 3 cut(s) | 38, 302, 634 |
| TatI | WGTACW | 2 cut(s) | 1263, 1292 |
| TfiI | GAWTC | 9 cut(s) | 263, 557, 706, 785, 887, 1046, 1076, 1094, 1436 |
| Tru1I | TTAA | 3 cut(s) | 512, 1242, 1376 |
| Tru9I | TTAA | 3 cut(s) | 512, 1242, 1376 |
| TscAI | CASTG | 4 cut(s) | 332, 475, 961, 1473 |
| TseFI | GTSAC | 4 cut(s) | 59, 284, 1333, 1409 |
| TseI | GCWGC | 1 cut(s) | 1474 |
| Tsp45I | GTSAC | 4 cut(s) | 59, 284, 1333, 1409 |
| TspDTI | ATGAA | 8 cut(s) | 284, 566, 570, 1037, 1049, 1169, 1412, 1590 |
| TspRI | CASTG | 4 cut(s) | 332, 475, 961, 1473 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1402 |
| VpaK11BI | GGWCC | 1 cut(s) | 408 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 239 |
| XapI | RAATTY | 7 cut(s) | 85, 194, 387, 563, 770, 1233, 1550 |
| XceI | RCATGY | 2 cut(s) | 155, 1063 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1403 |
| XhoI | CTCGAG | 2 cut(s) | 37, 301 |
| XmnI | GAANNNNTTC | 2 cut(s) | 640, 1139 |
| XspI | CTAG | 2 cut(s) | 878, 1050 |