MD00G1164000.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0012165
Physical Location & Seq
Forward (+)
37003460 .. 37008448
4989 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1164000.v1.1.491

Sequence Viewer

Length: 1599 bp
ATGCCGTGTACGGAAAAGGTACCGGTGAAGTTGGAGGTTGAGGAATCCTTAGAAGAGGAACATGGCCCGCTCAACAAACGTTCTAAACCCTCTCCTGCTTTTCAAGAGAGGCGTATTGGGGATAATGCGTTTGCTGTCCCACCTTCACAGTTCAATCCACTTGATGAGCCTAGCCCTTTGGGTCTGAGGCTGAGAAAGAGCCCATCCCTATTGGAGTTAATTCAAATGAAGCTTGCTCAAGGGAGTGCTGCTGCAGCTGGAGCTACACAGAGTGAAAATCTTAACTCTGGAGTTAAAAAGGAGTGTAAAGCAAATGCTCCATTGGGGACAGCGGATAAGCTGAAGGCTTCAAATTTTCCAGCTTCACTCTTAAGTATTGGGAGTTGGGAGTATAAATCAAGATATGAGGGAGATTTAGTGGCGAAGTGTTACTTTGCTAAGCATAAGCTTGTTTGGGAAGTTCTTGAAGGTGGTCTCAAGAGTAAAATAGAAATCCAGTGGTCAGATATTATGGCTCTGAAAGCAACTTGTCCTGATGATGGACCTGGTACTTTGACTGTTGTGTTGGCTAGACAACCCCTTTTCTTCCGGGAGACTAATCCCCAACCTAGAAAGCACACCTTGTGGCAGGCAACAGCAGATTTTACTGACGGACAAGCTAGCACTTATAGGGAACATGTTCTGCAATGCCCACAAGGGTTATTAAACAAACATTTTGAAAAGCTTATCCAGTGTGATACACGACTTTGTTTCTTAAGCCGGCAGCCAGAGATTGTTATGGAATCACCATATTTTGAACCACGCTCTTCTGCTTTTGAAGATCCAGGTGAATCCAAAAGCCATGGTTTTGATCAACTGGGGAATGGACCGAATCGTAAAGGTTCCTCTGTTGCTGGTTTCCAAGATATAGACTCACCATCTGCAAGTCAGTCATCTTCTTTGAAGGTTGACCAGCAGGATACAGCTTCTATGACAATCGAATATCAGTCCAGAGAAGCACCTTCCCCCAGCTCAGTTATGGATGCTCAGGCAATTGATGGAAATTGCAGCTTCGAAGCTGTTGATTCCAGGGGGAGCAGAAATTGGGAACAAATAAAAGTGCCTGGGCTTCAGCCATCGATGTCTGTGAGTGATCTTATGAGTCACATTGGAAACTGTATTTCAGAACAAATGACTTCTGCTGATCAACAGTCAGAATACCAGGACATGCTAGAGGACATTGCACAATACCTGCTGAGCGACACCCAATTTACAACAGCTTCAGATGAGAAATCCCTCATGTCAAGGGTCAATTCTCTTTGTTGCCTTCTGCAGAAGGACCCTGCTGCAGCTCAAACGCAGGTTGATGGTGATAGTCATGTTGAAGGATCGGGTAATGTAAGCGATGTTCGGCCCAATTACACTCCTGACAATAAATCTGGAGCTGATGTCAAGGATTCTGAAGAGGGTGTTTCTGACGGGAAGAAGGCATCAGGCATGTCAAGAAAAGACTCCTTTGCGGAATTGCTGTTTCATCTGCCTCGGATTGCCTCGCTTCCCTCACTTCCGAAAGTCTTGTTTAACATTTCTGAAGAAGATTGCGAGAGCCAAGCTAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

533

Amino Acids

58.27

Weight (kDa)

5.02

Isoelectric Point (pI)

56.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH_TRF2_HOY1 PF24818 118 - 236 9.4e-61 TRF2/HOY1 PH-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24100 AT4G30780
fragaria_vesca FvH4_4g10180
malus_domestica MD00G1164000.v1.1 MD16G1259500.v1.1
prunus_persica Prupe.1G102300_v2.0.a1
pyrus_communis pycom13g28620 pycom16g22740
rosa_chinensis RchiOBHm_Chr4g0405561
rosa_laevigata RLG00000008836
rosa_multiflora Rmu_sc0005023.1_g000013
rosa_roxburghii Rroxscaffold_5G00350070
rosa_rugosa Rorug04G0060600 Rorug04G0060600
rosa_samantha Rh4AG132500 Rh4BG127400 Rh4CG140200 Rh4DG126800
rosa_wichuraiana Rw4G010730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1239, 1330
Acc65I GGTACC 1 cut(s) 19
AccB1I GGYRCC 1 cut(s) 19
AccBSI CCGCTC 1 cut(s) 70
AciI CCGC 3 cut(s) 68, 332, 1499
AclI AACGTT 1 cut(s) 79
AclWI GGATC 2 cut(s) 815, 1375
AcsI RAATTY 1 cut(s) 352
AcuI CTGAAG 5 cut(s) 362, 1094, 1245, 1461, 1590
AdeI CACNNNGTG 2 cut(s) 272, 624
AfaI GTAC 3 cut(s) 10, 21, 550
AfiI CCNNNNNNNGG 1 cut(s) 539
AflII CTTAAG 2 cut(s) 370, 754
AflIII ACRYGT 1 cut(s) 676
AgeI ACCGGT 1 cut(s) 22
AjnI CCWGG 5 cut(s) 544, 823, 1067, 1102, 1200
Alw26I GTCTC 2 cut(s) 479, 587
AlwI GGATC 2 cut(s) 815, 1375
AoxI GGCC 2 cut(s) 64, 1391
ApeKI GCWGC 7 cut(s) 248, 251, 254, 763, 1047, 1325, 1328
ApoI RAATTY 1 cut(s) 352
AsiGI ACCGGT 1 cut(s) 22
Asp700I GAANNNNTTC 1 cut(s) 678
Asp718I GGTACC 1 cut(s) 19
AspS9I GGNCC 5 cut(s) 65, 542, 866, 1318, 1392
AsuC2I CCSGG 1 cut(s) 590
AsuHPI GGTGA 5 cut(s) 37, 777, 839, 906, 1361
AsuII TTCGAA 1 cut(s) 1053
AsuNHI GCTAGC 1 cut(s) 659
AvaII GGWCC 3 cut(s) 542, 866, 1318
BanI GGYRCC 1 cut(s) 19
BanII GRGCYC 1 cut(s) 203
BbvI GCAGC 7 cut(s) 235, 238, 266, 775, 1059, 1312, 1340
BccI CCATC 6 cut(s) 211, 533, 925, 1031, 1123, 1340
BciT130I CCWGG 5 cut(s) 546, 825, 1069, 1104, 1202
BciVI GTATCC 1 cut(s) 952
BclI TGATCA 2 cut(s) 850, 1183
BcnI CCSGG 1 cut(s) 590
BcoDI GTCTC 2 cut(s) 479, 587
BfaI CTAG 6 cut(s) 171, 570, 609, 660, 1211, 1593
BfmI CTRYAG 3 cut(s) 252, 1310, 1326
BfrI CTTAAG 2 cut(s) 370, 754
BfuAI ACCTGC 2 cut(s) 1239, 1330
BfuI GTATCC 1 cut(s) 952
BisI GCNGC 7 cut(s) 249, 252, 255, 764, 1048, 1326, 1329
BlpI GCTNAGC 2 cut(s) 438, 1235
BlsI GCNGC 7 cut(s) 250, 253, 256, 765, 1049, 1327, 1330
Bme1390I CCNGG 6 cut(s) 546, 590, 825, 1069, 1104, 1202
Bme18I GGWCC 3 cut(s) 542, 866, 1318
BmgT120I GGNCC 5 cut(s) 65, 542, 866, 1318, 1392
BmiI GGNNCC 3 cut(s) 21, 883, 1320
BmrFI CCNGG 6 cut(s) 546, 590, 825, 1069, 1104, 1202
BmrI ACTGGG 1 cut(s) 866
BmsI GCATC 2 cut(s) 1012, 1478
BmtI GCTAGC 1 cut(s) 663
BmuI ACTGGG 1 cut(s) 866
BpmI CTGGAG 3 cut(s) 279, 309, 1440
Bpu10I CCTNAGC 1 cut(s) 1026
Bpu1102I GCTNAGC 2 cut(s) 438, 1235
Bpu14I TTCGAA 1 cut(s) 1053
BpuEI CTTGAG 2 cut(s) 222, 461
BpuMI CCSGG 1 cut(s) 590
Bsa29I ATCGAT 1 cut(s) 1118
BsaI GGTCTC 1 cut(s) 479
BsaJI CCNNGG 4 cut(s) 841, 1068, 1103, 1520
BsaWI WCCGGW 1 cut(s) 22
BsaXI ACNNNNNCTCC 4 cut(s) 402, 432, 1413, 1443
Bsc4I CCNNNNNNNGG 1 cut(s) 539
Bse118I RCCGGY 2 cut(s) 22, 759
Bse1I ACTGG 3 cut(s) 496, 730, 861
Bse3DI GCAATG 2 cut(s) 692, 1218
BseBI CCWGG 5 cut(s) 546, 825, 1069, 1104, 1202
BseCI ATCGAT 1 cut(s) 1118
BseDI CCNNGG 4 cut(s) 841, 1068, 1103, 1520
BseGI GGATG 2 cut(s) 203, 1027
BseLI CCNNNNNNNGG 1 cut(s) 539
BseMI GCAATG 2 cut(s) 692, 1218
BseMII CTCAG 5 cut(s) 176, 182, 1026, 1040, 1226
BseNI ACTGG 3 cut(s) 496, 730, 861
BseXI GCAGC 7 cut(s) 235, 238, 266, 775, 1059, 1312, 1340
BseYI CCCAGC 1 cut(s) 1007
BshFI GGCC 2 cut(s) 66, 1393
BshNI GGYRCC 1 cut(s) 19
BshTI ACCGGT 1 cut(s) 22
BshVI ATCGAT 1 cut(s) 1118
BsiSI CCGG 3 cut(s) 23, 589, 760
BslFI GGGAC 2 cut(s) 122, 340
BslI CCNNNNNNNGG 1 cut(s) 539
BsmAI GTCTC 2 cut(s) 479, 587
BsmFI GGGAC 2 cut(s) 122, 340
BsnI GGCC 2 cut(s) 66, 1393
Bso31I GGTCTC 1 cut(s) 479
Bsp119I TTCGAA 1 cut(s) 1053
Bsp1286I GDGCHC 1 cut(s) 203
Bsp143I GATC 5 cut(s) 820, 850, 1132, 1183, 1367
Bsp1720I GCTNAGC 2 cut(s) 438, 1235
Bsp19I CCATGG 1 cut(s) 841
BspACI CCGC 3 cut(s) 68, 332, 1499
BspANI GGCC 2 cut(s) 66, 1393
BspCNI CTCAG 5 cut(s) 177, 183, 1025, 1039, 1227
BspDI ATCGAT 1 cut(s) 1118
BspLI GGNNCC 3 cut(s) 21, 883, 1320
BspMAI CTGCAG 3 cut(s) 256, 1314, 1330
BspMI ACCTGC 2 cut(s) 1239, 1330
BspOI GCTAGC 1 cut(s) 663
BspPI GGATC 2 cut(s) 815, 1375
BspQI GCTCTTC 1 cut(s) 811
BspT104I TTCGAA 1 cut(s) 1053
BspT107I GGYRCC 1 cut(s) 19
BspTI CTTAAG 2 cut(s) 370, 754
BspTNI GGTCTC 1 cut(s) 479
BsrBI CCGCTC 1 cut(s) 70
BsrDI GCAATG 2 cut(s) 692, 1218
BsrFI RCCGGY 2 cut(s) 22, 759
BsrI ACTGG 3 cut(s) 496, 730, 861
BssAI RCCGGY 2 cut(s) 22, 759
BssECI CCNNGG 4 cut(s) 841, 1068, 1103, 1520
BssMI GATC 5 cut(s) 820, 850, 1132, 1183, 1367
BssT1I CCWWGG 1 cut(s) 841
Bst2UI CCWGG 5 cut(s) 546, 825, 1069, 1104, 1202
Bst4CI ACNGT 4 cut(s) 150, 559, 1157, 1191
Bst6I CTCTTC 3 cut(s) 48, 811, 1437
BstAFI CTTAAG 2 cut(s) 370, 754
BstBI TTCGAA 1 cut(s) 1053
BstC8I GCNNGC 5 cut(s) 68, 234, 630, 661, 761
BstDEI CTNAG 7 cut(s) 49, 185, 191, 438, 1012, 1026, 1235
BstDSI CCRYGG 1 cut(s) 841
BstF5I GGATG 2 cut(s) 203, 1027
BstKTI GATC 5 cut(s) 823, 853, 1135, 1186, 1370
BstMAI GTCTC 2 cut(s) 479, 587
BstMBI GATC 5 cut(s) 820, 850, 1132, 1183, 1367
BstMWI GCNNNNNNNGC 3 cut(s) 254, 260, 521
BstNI CCWGG 5 cut(s) 546, 825, 1069, 1104, 1202
BstNSI RCATGY 3 cut(s) 680, 1210, 1480
BstSCI CCNGG 6 cut(s) 544, 588, 823, 1067, 1102, 1200
BstSFI CTRYAG 3 cut(s) 252, 1310, 1326
BstV1I GCAGC 7 cut(s) 235, 238, 266, 775, 1059, 1312, 1340
BstX2I RGATCY 1 cut(s) 820
BstYI RGATCY 1 cut(s) 820
Bsu15I ATCGAT 1 cut(s) 1118
BsuI GTATCC 1 cut(s) 952
BsuRI GGCC 2 cut(s) 66, 1393
BsuTUI ATCGAT 1 cut(s) 1118
BtgI CCRYGG 1 cut(s) 841
BtgZI GCGATG 1 cut(s) 1398
BtsCI GGATG 2 cut(s) 203, 1027
BtsIMutI CAGTG 2 cut(s) 503, 737
BveI ACCTGC 2 cut(s) 1239, 1330
Cac8I GCNNGC 5 cut(s) 68, 234, 630, 661, 761
Cfr10I RCCGGY 2 cut(s) 22, 759
Cfr13I GGNCC 5 cut(s) 65, 542, 866, 1318, 1392
ClaI ATCGAT 1 cut(s) 1118
CsiI ACCWGGT 1 cut(s) 544
Csp6I GTAC 3 cut(s) 9, 20, 549
CspAI ACCGGT 1 cut(s) 22
CviAII CATG 7 cut(s) 62, 677, 842, 1207, 1279, 1358, 1477
CviQI GTAC 3 cut(s) 9, 20, 549
DdeI CTNAG 7 cut(s) 49, 185, 191, 438, 1012, 1026, 1235
DpnI GATC 5 cut(s) 822, 852, 1134, 1185, 1369
DpnII GATC 5 cut(s) 820, 850, 1132, 1183, 1367
DraIII CACNNNGTG 2 cut(s) 272, 624
Eam1104I CTCTTC 3 cut(s) 48, 811, 1437
EarI CTCTTC 3 cut(s) 48, 811, 1437
Eco130I CCWWGG 1 cut(s) 841
Eco24I GRGCYC 1 cut(s) 203
Eco31I GGTCTC 1 cut(s) 479
Eco47I GGWCC 3 cut(s) 542, 866, 1318
Eco57I CTGAAG 5 cut(s) 362, 1094, 1245, 1461, 1590
EcoO109I RGGNCCY 1 cut(s) 1318
EcoRII CCWGG 5 cut(s) 544, 823, 1067, 1102, 1200
EcoT14I CCWWGG 1 cut(s) 841
EcoT38I GRGCYC 1 cut(s) 203
ErhI CCWWGG 1 cut(s) 841
FaeI CATG 7 cut(s) 65, 680, 845, 1210, 1282, 1361, 1480
FalI AAGNNNNNCTT 4 cut(s) 416, 448, 605, 637
FaqI GGGAC 2 cut(s) 122, 340
FatI CATG 7 cut(s) 61, 676, 841, 1206, 1278, 1357, 1476
FauI CCCGC 1 cut(s) 75
FbaI TGATCA 2 cut(s) 850, 1183
Fnu4HI GCNGC 7 cut(s) 249, 252, 255, 764, 1048, 1326, 1329
FokI GGATG 2 cut(s) 190, 1034
FriOI GRGCYC 1 cut(s) 203
Fsp4HI GCNGC 7 cut(s) 249, 252, 255, 764, 1048, 1326, 1329
FspBI CTAG 6 cut(s) 171, 570, 609, 660, 1211, 1593
GluI GCNGC 7 cut(s) 249, 252, 255, 764, 1048, 1326, 1329
GsaI CCCAGC 1 cut(s) 1011
GsuI CTGGAG 3 cut(s) 279, 309, 1440
HaeIII GGCC 2 cut(s) 66, 1393
HapII CCGG 3 cut(s) 23, 589, 760
Hin1II CATG 7 cut(s) 65, 680, 845, 1210, 1282, 1361, 1480
HincII GTYRAC 1 cut(s) 949
HindII GTYRAC 1 cut(s) 949
HindIII AAGCTT 3 cut(s) 230, 446, 722
HinfI GANTC 9 cut(s) 44, 782, 830, 871, 911, 1064, 1141, 1436, 1490
HpaII CCGG 3 cut(s) 23, 589, 760
HphI GGTGA 5 cut(s) 37, 777, 839, 906, 1361
Hpy166II GTNNAC 2 cut(s) 9, 949
Hpy8I GTNNAC 2 cut(s) 9, 949
HpyAV CCTTC 9 cut(s) 153, 337, 461, 937, 1011, 1309, 1316, 1358, 1459
HpyCH4III ACNGT 4 cut(s) 150, 559, 1157, 1191
HpyCH4IV ACGT 1 cut(s) 79
HpyCH4V TGCA 7 cut(s) 254, 685, 923, 1047, 1223, 1312, 1328
HpyF10VI GCNNNNNNNGC 3 cut(s) 254, 260, 521
HpyF3I CTNAG 7 cut(s) 49, 185, 191, 438, 1012, 1026, 1235
HpySE526I ACGT 1 cut(s) 79
Hsp92II CATG 7 cut(s) 65, 680, 845, 1210, 1282, 1361, 1480
KpnI GGTACC 1 cut(s) 23
KroI GCCGGC 1 cut(s) 759
KroNI GCCGGC 1 cut(s) 761
Ksp22I TGATCA 2 cut(s) 850, 1183
Kzo9I GATC 5 cut(s) 820, 850, 1132, 1183, 1367
LguI GCTCTTC 1 cut(s) 811
LmnI GCTCC 4 cut(s) 260, 322, 1074, 1421
Lsp1109I GCAGC 7 cut(s) 235, 238, 266, 775, 1059, 1312, 1340
LweI GCATC 2 cut(s) 1012, 1478
MabI ACCWGGT 1 cut(s) 544
MaeI CTAG 6 cut(s) 171, 570, 609, 660, 1211, 1593
MaeII ACGT 1 cut(s) 79
MaeIII GTNAC 2 cut(s) 428, 1142
MalI GATC 5 cut(s) 822, 852, 1134, 1185, 1369
MbiI CCGCTC 1 cut(s) 70
MboI GATC 5 cut(s) 820, 850, 1132, 1183, 1367
MboII GAAGA 9 cut(s) 65, 577, 798, 830, 927, 1454, 1474, 1583, 1586
MfeI CAATTG 1 cut(s) 1032
MflI RGATCY 1 cut(s) 820
MhlI GDGCHC 1 cut(s) 203
MluCI AATT 9 cut(s) 219, 352, 1032, 1042, 1081, 1247, 1291, 1396, 1502
MlyI GAGTC 3 cut(s) 905, 1150, 1484
MmeI TCCRAC 1 cut(s) 12
MroNI GCCGGC 1 cut(s) 759
MroXI GAANNNNTTC 1 cut(s) 678
MseI TTAA 7 cut(s) 218, 282, 294, 371, 704, 755, 1560
MspA1I CMGCKG 2 cut(s) 257, 332
MspCI CTTAAG 2 cut(s) 370, 754
MspI CCGG 3 cut(s) 23, 589, 760
MspR9I CCNGG 6 cut(s) 546, 590, 825, 1069, 1104, 1202
MunI CAATTG 1 cut(s) 1032
MvaI CCWGG 5 cut(s) 546, 825, 1069, 1104, 1202
MwoI GCNNNNNNNGC 3 cut(s) 254, 260, 521
NaeI GCCGGC 1 cut(s) 761
NciI CCSGG 1 cut(s) 590
NcoI CCATGG 1 cut(s) 841
NdeII GATC 5 cut(s) 820, 850, 1132, 1183, 1367
NgoMIV GCCGGC 1 cut(s) 759
NheI GCTAGC 1 cut(s) 659
NlaIII CATG 7 cut(s) 65, 680, 845, 1210, 1282, 1361, 1480
NlaIV GGNNCC 3 cut(s) 21, 883, 1320
NmuCI GTSAC 1 cut(s) 1142
NspI RCATGY 3 cut(s) 680, 1210, 1480
NspV TTCGAA 1 cut(s) 1053
PciI ACATGT 1 cut(s) 676
PciSI GCTCTTC 1 cut(s) 811
PdiI GCCGGC 1 cut(s) 761
PdmI GAANNNNTTC 1 cut(s) 678
PfeI GAWTC 6 cut(s) 44, 782, 830, 871, 1064, 1436
PfoI TCCNGGA 1 cut(s) 588
PinAI ACCGGT 1 cut(s) 22
PkrI GCNGC 7 cut(s) 250, 253, 256, 765, 1049, 1327, 1330
PleI GAGTC 3 cut(s) 905, 1149, 1484
PpsI GAGTC 3 cut(s) 905, 1149, 1484
PpuMI RGGWCCY 1 cut(s) 1318
PscI ACATGT 1 cut(s) 676
Psp1406I AACGTT 1 cut(s) 79
Psp5II RGGWCCY 1 cut(s) 1318
Psp6I CCWGG 5 cut(s) 544, 823, 1067, 1102, 1200
PspFI CCCAGC 1 cut(s) 1007
PspGI CCWGG 5 cut(s) 544, 823, 1067, 1102, 1200
PspN4I GGNNCC 3 cut(s) 21, 883, 1320
PspPI GGNCC 5 cut(s) 65, 542, 866, 1318, 1392
PspPPI RGGWCCY 1 cut(s) 1318
PsrI GAACNNNNNNTAC 2 cut(s) 1371, 1403
PstI CTGCAG 3 cut(s) 256, 1314, 1330
PsuI RGATCY 1 cut(s) 820
PvuII CAGCTG 1 cut(s) 257
RsaI GTAC 3 cut(s) 10, 21, 550
RsaNI GTAC 3 cut(s) 9, 20, 549
SapI GCTCTTC 1 cut(s) 811
SaqAI TTAA 7 cut(s) 218, 282, 294, 371, 704, 755, 1560
SatI GCNGC 7 cut(s) 249, 252, 255, 764, 1048, 1326, 1329
Sau3AI GATC 5 cut(s) 820, 850, 1132, 1183, 1367
Sau96I GGNCC 5 cut(s) 65, 542, 866, 1318, 1392
SchI GAGTC 3 cut(s) 905, 1150, 1484
ScrFI CCNGG 6 cut(s) 546, 590, 825, 1069, 1104, 1202
SduI GDGCHC 1 cut(s) 203
SexAI ACCWGGT 1 cut(s) 544
SfaNI GCATC 2 cut(s) 1012, 1478
SfcI CTRYAG 3 cut(s) 252, 1310, 1326
SfuI TTCGAA 1 cut(s) 1053
SinI GGWCC 3 cut(s) 542, 866, 1318
SmlI CTYRAG 4 cut(s) 237, 370, 476, 754
SmoI CTYRAG 4 cut(s) 237, 370, 476, 754
Sse9I AATT 9 cut(s) 219, 352, 1032, 1042, 1081, 1247, 1291, 1396, 1502
SsiI CCGC 3 cut(s) 68, 332, 1499
SspMI CTAG 6 cut(s) 171, 570, 609, 660, 1211, 1593
StyD4I CCNGG 6 cut(s) 544, 588, 823, 1067, 1102, 1200
StyI CCWWGG 1 cut(s) 841
TaaI ACNGT 4 cut(s) 150, 559, 1157, 1191
TaiI ACGT 1 cut(s) 82
TaqI TCGA 3 cut(s) 978, 1053, 1118
TaqII GACCGA 1 cut(s) 883
TasI AATT 9 cut(s) 219, 352, 1032, 1042, 1081, 1247, 1291, 1396, 1502
TfiI GAWTC 6 cut(s) 44, 782, 830, 871, 1064, 1436
Tru1I TTAA 7 cut(s) 218, 282, 294, 371, 704, 755, 1560
Tru9I TTAA 7 cut(s) 218, 282, 294, 371, 704, 755, 1560
TscAI CASTG 2 cut(s) 503, 737
TseFI GTSAC 1 cut(s) 1142
TseI GCWGC 7 cut(s) 248, 251, 254, 763, 1047, 1325, 1328
Tsp45I GTSAC 1 cut(s) 1142
TspDTI ATGAA 2 cut(s) 242, 1502
TspGWI ACGGA 2 cut(s) 26, 666
TspRI CASTG 2 cut(s) 503, 737
Vha464I CTTAAG 2 cut(s) 370, 754
VpaK11BI GGWCC 3 cut(s) 542, 866, 1318
XapI RAATTY 1 cut(s) 352
XceI RCATGY 3 cut(s) 680, 1210, 1480
XcmI CCANNNNNNNNNTGG 1 cut(s) 1015
XmnI GAANNNNTTC 1 cut(s) 678
XspI CTAG 6 cut(s) 171, 570, 609, 660, 1211, 1593
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.