RLG00000008836

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0012165
Physical Location & Seq
Reverse (-)
40609888 .. 40613683
3796 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008836

Sequence Viewer

Length: 1608 bp
ATGAAATCCGGCGATCTCCGCCAAAAGACGCCGTGTAAGGATAAGCTGCCGGTGAAATTGGAGATCGAAGACTCCTTGGAGGAGGAGCATGGCCCCCTCAACAAGCGCTCAAAACCCTCTCCTGCTTTTCATGAGAGTTCGGGCGATAACGGGTTTGCTGTCTCAGCTCCCCAATACAATCCACTTGATGAGCCTAGCCCTTTGGGTTTGAGGCTCAGGAAGAGCCCGTCTTTATTGGAATTAATTCAAATGAAGCTTGCTCAGGGGGGTCCTCCTGCATCTGGAGCTGTACCAAGAGAAAATCTTAACACTGGAGTTAAGAAGGAGATTAAAGCAAGTGCTGCGGTGGGGGCTACTGATAAGCTTAAAGCGTCAAATTTTCCAGCTTCAATGTTAAGGATCGGTAGCTGGGAGTACAAATCAAGGTACGAGGGTGATTTAGTGGCAAAGTGTTATTTTGCAAAGCATAAGCTCGTCTGGGAGGTTCTTGAAGGAGGCCTCAAGAGCAAAATAGAAATCCAATGGTCAGATATCATGGCTTTGAAAGCGAACTGTCCTGATGATGGACCTGGTACTTTGAATGTTGTGTTGGCTAGACAACCTCTGTTCTTCAGGGAGACTAATCCTCAGCCTAGAAAGCATACTTTATGGCAAGCAACCTCAGATTTTACCGATGGGCAAGCAAGCCTGCACAGGCAACATTTTCTGCAATGTCCACAAGGACTGTTAAACAAGCATTTTGAAAAGCTTATCCAGTGTGACACACGTCTTTGCTTCTTAAGTCGACAGCCAGAGATCGTTTTGGATTCACCTTATTTTGAACTGCGGCCTTCTGTATTTGAAGACCAAGGAGTATCCAAAGGCCTTGGTTTTGACCAACCGGCAAGTGGTAAAGGATCCTCCATTTCTGGTTTCCAGGATACAGCATCACCATCTGCAAGTCAGTCATCATCTTTGAAGACAGACCAGCAGGATTCAGCTGGTATGACATTAGAGCATCGGTCCAGAGAAGCTCCTTCCCCTAGCTCAGGAAATGGAAGTTCTGAAGTTGTTGATTCCAGGGGGCCAAGAAACTGGGAACAGATAAAAGTGCCCGGGCTCCATCCTTCAATGTCAATGAGTGATTTTATGAATCACATTGGGAACTGTATTTCAGAACAAATGACTTCCGGAAATCCACCTTCTGCCGATCAACAGTCAGAATACCAGGATATTCTTGAGGACATTGCGCAGTACCTGTTAAGTGACACTCAATTAACTGCAGCAGATGAGAGTCATGAAACATCTCTCATGTCCAGGGTCAATTCTCTTTGTTGCCTTTTGCAGAAGGACCCCACTTCTCTTCAGACTTCGCAGGTTGAAGTTGAAGGCACAGATGGTGGAAGGGATATTCAGCTTAACCACACTCCTGGTGGTATATCTGGAGCTGATATGCAGGCTCCTGAAGAGGATATGAAGGATGTTCCTGGAGGAAAGAAGGCACCGGGAATGTCGAGAAAAGACTCCTTCGGGGAATTGCTGTTTCACCTCCCTCGCATCGCCTCTCTTCCCTCACTTCCAAAAGTATTGTTCAACATTTCAGAAGATTGTGAGAGTCAAGGTAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

536

Amino Acids

58.46

Weight (kDa)

5.56

Isoelectric Point (pI)

54.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH_TRF2_HOY1 PF24818 126 - 244 8.7e-62 TRF2/HOY1 PH-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24100 AT4G30780
fragaria_vesca FvH4_4g10180
malus_domestica MD00G1164000.v1.1 MD16G1259500.v1.1
prunus_persica Prupe.1G102300_v2.0.a1
pyrus_communis pycom13g28620 pycom16g22740
rosa_chinensis RchiOBHm_Chr4g0405561
rosa_laevigata RLG00000008836
rosa_multiflora Rmu_sc0005023.1_g000013
rosa_roxburghii Rroxscaffold_5G00350070
rosa_rugosa Rorug04G0060600 Rorug04G0060600
rosa_samantha Rh4AG132500 Rh4BG127400 Rh4CG140200 Rh4DG126800
rosa_wichuraiana Rw4G010730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1230
Acc36I ACCTGC 1 cut(s) 1345
AccB1I GGYRCC 1 cut(s) 1480
AccI GTMKAC 1 cut(s) 784
AccIII TCCGGA 1 cut(s) 1169
AciI CCGC 3 cut(s) 19, 344, 826
AclWI GGATC 3 cut(s) 407, 891, 904
AcsI RAATTY 1 cut(s) 376
AcuI CTGAAG 4 cut(s) 595, 1065, 1328, 1464
AcyI GRCGYC 1 cut(s) 29
AfaI GTAC 5 cut(s) 291, 416, 428, 574, 1235
AfeI AGCGCT 1 cut(s) 107
AfiI CCNNNNNNNGG 4 cut(s) 281, 563, 887, 1028
AflII CTTAAG 1 cut(s) 778
AflIII ACRYGT 1 cut(s) 764
AjiI CACGTC 1 cut(s) 767
AjnI CCWGG 7 cut(s) 568, 915, 1058, 1206, 1295, 1408, 1465
AjuI GAANNNNNNNTTGG 2 cut(s) 572, 604
Alw26I GTCTC 2 cut(s) 166, 611
AlwI GGATC 3 cut(s) 407, 891, 904
AlwNI CAGNNNCTG 1 cut(s) 1237
Ama87I CYCGRG 1 cut(s) 1094
Aor13HI TCCGGA 1 cut(s) 1169
Aor51HI AGCGCT 1 cut(s) 107
AoxI GGCC 5 cut(s) 91, 496, 827, 862, 1064
ApeKI GCWGC 3 cut(s) 46, 341, 1262
ApoI RAATTY 1 cut(s) 376
AseI ATTAAT 1 cut(s) 242
Asp700I GAANNNNTTC 1 cut(s) 243
AspLEI GCGC 2 cut(s) 108, 1231
AspS9I GGNCC 6 cut(s) 92, 269, 566, 1002, 1064, 1330
AsuC2I CCSGG 3 cut(s) 1095, 1096, 1485
AsuHPI GGTGA 5 cut(s) 64, 446, 801, 921, 1517
AvaI CYCGRG 1 cut(s) 1094
AvaII GGWCC 4 cut(s) 269, 566, 1002, 1330
BaeGI GKGCMC 1 cut(s) 1095
BaeI ACNNNNGTAYC 2 cut(s) 418, 451
BamHI GGATCC 1 cut(s) 896
BanI GGYRCC 1 cut(s) 1480
BanII GRGCYC 2 cut(s) 227, 1101
BbsI GAAGAC 3 cut(s) 75, 849, 965
BbvCI CCTCAGC 1 cut(s) 627
BbvI GCAGC 3 cut(s) 33, 328, 1274
BccI CCATC 5 cut(s) 557, 668, 940, 1110, 1370
BceAI ACGGC 1 cut(s) 16
BciT130I CCWGG 7 cut(s) 570, 917, 1060, 1208, 1297, 1410, 1467
BciVI GTATCC 2 cut(s) 865, 913
BcnI CCSGG 3 cut(s) 1095, 1096, 1485
BcoDI GTCTC 2 cut(s) 166, 611
BfaI CTAG 4 cut(s) 195, 594, 633, 1023
BfmI CTRYAG 1 cut(s) 1260
BfoI RGCGCY 1 cut(s) 109
BfrI CTTAAG 1 cut(s) 778
BfuAI ACCTGC 1 cut(s) 1345
BfuI GTATCC 2 cut(s) 865, 913
BisI GCNGC 4 cut(s) 47, 342, 827, 1263
BlsI GCNGC 4 cut(s) 48, 343, 828, 1264
Bme18I GGWCC 4 cut(s) 269, 566, 1002, 1330
BmeT110I CYCGRG 1 cut(s) 1094
BmgBI CACGTC 1 cut(s) 767
BmgT120I GGNCC 6 cut(s) 92, 269, 566, 1002, 1064, 1330
BmiI GGNNCC 8 cut(s) 94, 270, 898, 1065, 1100, 1332, 1440, 1482
BmrI ACTGGG 1 cut(s) 1084
BmsI GCATC 4 cut(s) 287, 935, 1006, 1545
BmuI ACTGGG 1 cut(s) 1084
BoxI GACNNNNGTC 1 cut(s) 765
BpiI GAAGAC 3 cut(s) 75, 849, 965
BpmI CTGGAG 4 cut(s) 303, 333, 1443, 1488
Bpu10I CCTNAGC 4 cut(s) 215, 261, 627, 1027
BpuEI CTTGAG 2 cut(s) 485, 1238
BpuMI CCSGG 3 cut(s) 1095, 1096, 1485
BsaHI GRCGYC 1 cut(s) 29
BsaJI CCNNGG 6 cut(s) 75, 847, 865, 1059, 1094, 1296
BsaWI WCCGGW 1 cut(s) 1169
Bsc4I CCNNNNNNNGG 4 cut(s) 281, 563, 887, 1028
Bse118I RCCGGY 2 cut(s) 49, 880
Bse1I ACTGG 3 cut(s) 316, 754, 1079
Bse3DI GCAATG 2 cut(s) 716, 1224
BseAI TCCGGA 1 cut(s) 1169
BseBI CCWGG 7 cut(s) 570, 917, 1060, 1208, 1297, 1410, 1467
BseDI CCNNGG 6 cut(s) 75, 847, 865, 1059, 1094, 1296
BseGI GGATG 2 cut(s) 1102, 1465
BseLI CCNNNNNNNGG 4 cut(s) 281, 563, 887, 1028
BseMI GCAATG 2 cut(s) 716, 1224
BseMII CTCAG 6 cut(s) 177, 229, 275, 641, 675, 1041
BseNI ACTGG 3 cut(s) 316, 754, 1079
BseRI GAGGAG 2 cut(s) 95, 98
BseSI GKGCMC 1 cut(s) 1095
BseXI GCAGC 3 cut(s) 33, 328, 1274
BseYI CCCAGC 1 cut(s) 408
BsgI GTGCAG 1 cut(s) 674
BshFI GGCC 5 cut(s) 93, 498, 829, 864, 1066
BshNI GGYRCC 1 cut(s) 1480
BsiHKCI CYCGRG 1 cut(s) 1094
BsiSI CCGG 6 cut(s) 9, 50, 881, 1095, 1170, 1484
BslI CCNNNNNNNGG 4 cut(s) 281, 563, 887, 1028
BsmAI GTCTC 2 cut(s) 166, 611
BsnI GGCC 5 cut(s) 93, 498, 829, 864, 1066
BsoBI CYCGRG 1 cut(s) 1094
Bsp1286I GDGCHC 3 cut(s) 227, 1095, 1101
Bsp13I TCCGGA 1 cut(s) 1169
Bsp143I GATC 6 cut(s) 13, 63, 399, 795, 896, 1189
BspACI CCGC 3 cut(s) 19, 344, 826
BspANI GGCC 5 cut(s) 93, 498, 829, 864, 1066
BspCNI CTCAG 6 cut(s) 176, 228, 274, 640, 674, 1040
BspEI TCCGGA 1 cut(s) 1169
BspHI TCATGA 2 cut(s) 130, 1276
BspLI GGNNCC 8 cut(s) 94, 270, 898, 1065, 1100, 1332, 1440, 1482
BspMAI CTGCAG 1 cut(s) 1264
BspMI ACCTGC 1 cut(s) 1345
BspPI GGATC 3 cut(s) 407, 891, 904
BspQI GCTCTTC 1 cut(s) 215
BspT107I GGYRCC 1 cut(s) 1480
BspTI CTTAAG 1 cut(s) 778
BsrDI GCAATG 2 cut(s) 716, 1224
BsrFI RCCGGY 2 cut(s) 49, 880
BsrI ACTGG 3 cut(s) 316, 754, 1079
BssAI RCCGGY 2 cut(s) 49, 880
BssECI CCNNGG 6 cut(s) 75, 847, 865, 1059, 1094, 1296
BssMI GATC 6 cut(s) 13, 63, 399, 795, 896, 1189
BssNI GRCGYC 1 cut(s) 29
BssT1I CCWWGG 3 cut(s) 75, 847, 865
Bst2UI CCWGG 7 cut(s) 570, 917, 1060, 1208, 1297, 1410, 1467
Bst4CI ACNGT 4 cut(s) 554, 726, 1148, 1197
Bst6I CTCTTC 4 cut(s) 215, 1347, 1440, 1551
BstACI GRCGYC 1 cut(s) 29
BstAFI CTTAAG 1 cut(s) 778
BstAPI GCANNNNNTGC 1 cut(s) 341
BstC8I GCNNGC 6 cut(s) 258, 654, 681, 685, 689, 1437
BstDEI CTNAG 6 cut(s) 163, 215, 261, 627, 661, 1027
BstENI CCTNNNNNAGG 1 cut(s) 1026
BstF5I GGATG 2 cut(s) 1102, 1465
BstH2I RGCGCY 1 cut(s) 109
BstHHI GCGC 2 cut(s) 108, 1231
BstKTI GATC 6 cut(s) 16, 66, 402, 798, 899, 1192
BstMAI GTCTC 2 cut(s) 166, 611
BstMBI GATC 6 cut(s) 13, 63, 399, 795, 896, 1189
BstMWI GCNNNNNNNGC 8 cut(s) 18, 164, 284, 341, 350, 504, 545, 637
BstNI CCWGG 7 cut(s) 570, 917, 1060, 1208, 1297, 1410, 1467
BstPAI GACNNNNGTC 1 cut(s) 765
BstSFI CTRYAG 1 cut(s) 1260
BstSLI GKGCMC 1 cut(s) 1095
BstV1I GCAGC 3 cut(s) 33, 328, 1274
BstV2I GAAGAC 3 cut(s) 75, 849, 965
BstX2I RGATCY 1 cut(s) 896
BstXI CCANNNNNNTGG 2 cut(s) 1074, 1409
BstYI RGATCY 1 cut(s) 896
BsuI GTATCC 2 cut(s) 865, 913
BsuRI GGCC 5 cut(s) 93, 498, 829, 864, 1066
BtgZI GCGATG 1 cut(s) 1522
BtrI CACGTC 1 cut(s) 767
BtsCI GGATG 2 cut(s) 1102, 1465
BtsIMutI CAGTG 2 cut(s) 309, 761
BveI ACCTGC 1 cut(s) 1345
Cac8I GCNNGC 6 cut(s) 258, 654, 681, 685, 689, 1437
CaiI CAGNNNCTG 1 cut(s) 1237
CciI TCATGA 2 cut(s) 130, 1276
CfoI GCGC 2 cut(s) 108, 1231
Cfr10I RCCGGY 2 cut(s) 49, 880
Cfr13I GGNCC 6 cut(s) 92, 269, 566, 1002, 1064, 1330
Cfr9I CCCGGG 1 cut(s) 1094
CseI GACGC 2 cut(s) 37, 360
CsiI ACCWGGT 1 cut(s) 568
Csp6I GTAC 5 cut(s) 290, 415, 427, 573, 1234
CviAII CATG 5 cut(s) 89, 131, 535, 1277, 1291
CviQI GTAC 5 cut(s) 290, 415, 427, 573, 1234
DdeI CTNAG 6 cut(s) 163, 215, 261, 627, 661, 1027
DpnI GATC 6 cut(s) 15, 65, 401, 797, 898, 1191
DpnII GATC 6 cut(s) 13, 63, 399, 795, 896, 1189
Eam1104I CTCTTC 4 cut(s) 215, 1347, 1440, 1551
EarI CTCTTC 4 cut(s) 215, 1347, 1440, 1551
EciI GGCGGA 1 cut(s) 8
Eco130I CCWWGG 3 cut(s) 75, 847, 865
Eco147I AGGCCT 2 cut(s) 498, 864
Eco24I GRGCYC 2 cut(s) 227, 1101
Eco32I GATATC 1 cut(s) 532
Eco47I GGWCC 4 cut(s) 269, 566, 1002, 1330
Eco47III AGCGCT 1 cut(s) 107
Eco57I CTGAAG 4 cut(s) 595, 1065, 1328, 1464
Eco88I CYCGRG 1 cut(s) 1094
EcoNI CCTNNNNNAGG 1 cut(s) 1026
EcoO109I RGGNCCY 2 cut(s) 269, 1330
EcoRII CCWGG 7 cut(s) 568, 915, 1058, 1206, 1295, 1408, 1465
EcoRV GATATC 1 cut(s) 532
EcoT14I CCWWGG 3 cut(s) 75, 847, 865
EcoT38I GRGCYC 2 cut(s) 227, 1101
ErhI CCWWGG 3 cut(s) 75, 847, 865
FaeI CATG 5 cut(s) 92, 134, 538, 1280, 1294
FatI CATG 5 cut(s) 88, 130, 534, 1276, 1290
FblI GTMKAC 1 cut(s) 784
Fnu4HI GCNGC 4 cut(s) 47, 342, 827, 1263
FokI GGATG 2 cut(s) 1089, 1472
FriOI GRGCYC 2 cut(s) 227, 1101
Fsp4HI GCNGC 4 cut(s) 47, 342, 827, 1263
FspBI CTAG 4 cut(s) 195, 594, 633, 1023
FspI TGCGCA 1 cut(s) 1230
GlaI GCGC 2 cut(s) 107, 1230
GluI GCNGC 4 cut(s) 47, 342, 827, 1263
GsaI CCCAGC 1 cut(s) 412
GsuI CTGGAG 4 cut(s) 303, 333, 1443, 1488
HaeII RGCGCY 1 cut(s) 109
HaeIII GGCC 5 cut(s) 93, 498, 829, 864, 1066
HapII CCGG 6 cut(s) 9, 50, 881, 1095, 1170, 1484
HgaI GACGC 2 cut(s) 37, 360
HhaI GCGC 2 cut(s) 108, 1231
Hin1I GRCGYC 1 cut(s) 29
Hin1II CATG 5 cut(s) 92, 134, 538, 1280, 1294
Hin6I GCGC 2 cut(s) 106, 1229
HinP1I GCGC 2 cut(s) 106, 1229
HincII GTYRAC 1 cut(s) 785
HindII GTYRAC 1 cut(s) 785
HindIII AAGCTT 3 cut(s) 254, 362, 746
HinfI GANTC 8 cut(s) 71, 806, 974, 1055, 1132, 1273, 1502, 1594
HpaII CCGG 6 cut(s) 9, 50, 881, 1095, 1170, 1484
HphI GGTGA 5 cut(s) 64, 446, 801, 921, 1517
Hpy166II GTNNAC 2 cut(s) 716, 785
Hpy188I TCNGA 7 cut(s) 529, 664, 1045, 1156, 1201, 1347, 1582
Hpy8I GTNNAC 2 cut(s) 716, 785
HpyCH4III ACNGT 4 cut(s) 554, 726, 1148, 1197
HpyCH4IV ACGT 1 cut(s) 766
HpyCH4V TGCA 8 cut(s) 278, 461, 691, 709, 938, 1262, 1324, 1435
HpyF10VI GCNNNNNNNGC 8 cut(s) 18, 164, 284, 341, 350, 504, 545, 637
HpyF3I CTNAG 6 cut(s) 163, 215, 261, 627, 661, 1027
HpySE526I ACGT 1 cut(s) 766
Hsp92I GRCGYC 1 cut(s) 29
Hsp92II CATG 5 cut(s) 92, 134, 538, 1280, 1294
HspAI GCGC 2 cut(s) 106, 1229
Kpn2I TCCGGA 1 cut(s) 1169
Kzo9I GATC 6 cut(s) 13, 63, 399, 795, 896, 1189
LguI GCTCTTC 1 cut(s) 215
LmnI GCTCC 7 cut(s) 85, 172, 284, 1018, 1104, 1424, 1444
Lsp1109I GCAGC 3 cut(s) 33, 328, 1274
LweI GCATC 4 cut(s) 287, 935, 1006, 1545
MabI ACCWGGT 1 cut(s) 568
MaeI CTAG 4 cut(s) 195, 594, 633, 1023
MaeII ACGT 1 cut(s) 766
MaeIII GTNAC 2 cut(s) 758, 1244
MalI GATC 6 cut(s) 15, 65, 401, 797, 898, 1191
MboI GATC 6 cut(s) 13, 63, 399, 795, 896, 1189
MboII GAAGA 9 cut(s) 80, 232, 601, 854, 970, 1334, 1457, 1538, 1595
MflI RGATCY 1 cut(s) 896
MhlI GDGCHC 3 cut(s) 227, 1095, 1101
MluCI AATT 7 cut(s) 56, 239, 243, 376, 1253, 1303, 1514
MlyI GAGTC 4 cut(s) 65, 1282, 1496, 1603
MroI TCCGGA 1 cut(s) 1169
MroXI GAANNNNTTC 1 cut(s) 243
MspA1I CMGCKG 1 cut(s) 980
MspCI CTTAAG 1 cut(s) 778
MspI CCGG 6 cut(s) 9, 50, 881, 1095, 1170, 1484
MvaI CCWGG 7 cut(s) 570, 917, 1060, 1208, 1297, 1410, 1467
MwoI GCNNNNNNNGC 8 cut(s) 18, 164, 284, 341, 350, 504, 545, 637
NciI CCSGG 3 cut(s) 1095, 1096, 1485
NdeII GATC 6 cut(s) 13, 63, 399, 795, 896, 1189
NlaIII CATG 5 cut(s) 92, 134, 538, 1280, 1294
NlaIV GGNNCC 8 cut(s) 94, 270, 898, 1065, 1100, 1332, 1440, 1482
NmuCI GTSAC 2 cut(s) 758, 1244
NsbI TGCGCA 1 cut(s) 1230
PagI TCATGA 2 cut(s) 130, 1276
PceI AGGCCT 2 cut(s) 498, 864
PciSI GCTCTTC 1 cut(s) 215
PdmI GAANNNNTTC 1 cut(s) 243
PfeI GAWTC 4 cut(s) 806, 974, 1055, 1132
PfoI TCCNGGA 2 cut(s) 915, 1465
PkrI GCNGC 4 cut(s) 48, 343, 828, 1264
PleI GAGTC 4 cut(s) 65, 1281, 1496, 1602
PpsI GAGTC 4 cut(s) 65, 1281, 1496, 1602
PpuMI RGGWCCY 2 cut(s) 269, 1330
PshAI GACNNNNGTC 1 cut(s) 765
PshBI ATTAAT 1 cut(s) 242
Psp5II RGGWCCY 2 cut(s) 269, 1330
Psp6I CCWGG 7 cut(s) 568, 915, 1058, 1206, 1295, 1408, 1465
PspFI CCCAGC 1 cut(s) 408
PspGI CCWGG 7 cut(s) 568, 915, 1058, 1206, 1295, 1408, 1465
PspN4I GGNNCC 8 cut(s) 94, 270, 898, 1065, 1100, 1332, 1440, 1482
PspPI GGNCC 6 cut(s) 92, 269, 566, 1002, 1064, 1330
PspPPI RGGWCCY 2 cut(s) 269, 1330
PstI CTGCAG 1 cut(s) 1264
PstNI CAGNNNCTG 1 cut(s) 1237
PsuI RGATCY 1 cut(s) 896
PvuII CAGCTG 1 cut(s) 980
RsaI GTAC 5 cut(s) 291, 416, 428, 574, 1235
RsaNI GTAC 5 cut(s) 290, 415, 427, 573, 1234
SalI GTCGAC 1 cut(s) 783
SapI GCTCTTC 1 cut(s) 215
SatI GCNGC 4 cut(s) 47, 342, 827, 1263
Sau3AI GATC 6 cut(s) 13, 63, 399, 795, 896, 1189
Sau96I GGNCC 6 cut(s) 92, 269, 566, 1002, 1064, 1330
SchI GAGTC 4 cut(s) 65, 1282, 1496, 1603
SduI GDGCHC 3 cut(s) 227, 1095, 1101
SexAI ACCWGGT 1 cut(s) 568
SfaNI GCATC 4 cut(s) 287, 935, 1006, 1545
SfcI CTRYAG 1 cut(s) 1260
SinI GGWCC 4 cut(s) 269, 566, 1002, 1330
SmaI CCCGGG 1 cut(s) 1096
SmlI CTYRAG 3 cut(s) 500, 778, 1217
SmoI CTYRAG 3 cut(s) 500, 778, 1217
SrfI GCCCGGGC 1 cut(s) 1096
Sse9I AATT 7 cut(s) 56, 239, 243, 376, 1253, 1303, 1514
SseBI AGGCCT 2 cut(s) 498, 864
SsiI CCGC 3 cut(s) 19, 344, 826
SspMI CTAG 4 cut(s) 195, 594, 633, 1023
StuI AGGCCT 2 cut(s) 498, 864
StyI CCWWGG 3 cut(s) 75, 847, 865
TaaI ACNGT 4 cut(s) 554, 726, 1148, 1197
TaiI ACGT 1 cut(s) 769
TaqI TCGA 3 cut(s) 66, 784, 1493
TaqII GACCGA 1 cut(s) 990
TasI AATT 7 cut(s) 56, 239, 243, 376, 1253, 1303, 1514
TatI WGTACW 1 cut(s) 414
TauI GCSGC 1 cut(s) 829
TfiI GAWTC 4 cut(s) 806, 974, 1055, 1132
TscAI CASTG 2 cut(s) 316, 761
TseFI GTSAC 2 cut(s) 758, 1244
TseI GCWGC 3 cut(s) 46, 341, 1262
Tsp45I GTSAC 2 cut(s) 758, 1244
TspDTI ATGAA 6 cut(s) 17, 119, 266, 1145, 1293, 1469
TspMI CCCGGG 1 cut(s) 1094
TspRI CASTG 2 cut(s) 316, 761
Vha464I CTTAAG 1 cut(s) 778
VpaK11BI GGWCC 4 cut(s) 269, 566, 1002, 1330
VspI ATTAAT 1 cut(s) 242
XagI CCTNNNNNAGG 1 cut(s) 1026
XapI RAATTY 1 cut(s) 376
XcmI CCANNNNNNNNNTGG 2 cut(s) 884, 1409
XmaI CCCGGG 1 cut(s) 1094
XmiI GTMKAC 1 cut(s) 784
XmnI GAANNNNTTC 1 cut(s) 243
XspI CTAG 4 cut(s) 195, 594, 633, 1023
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.