Prupe.1G102300_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0012165
Physical Location & Seq
Forward (+)
8151598 .. 8156819
5222 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G102300.1

Sequence Viewer

Length: 1647 bp
ATGGTGCATATGATGAAATCTGGAGATCTCCAAACGACGCCGTGTACGGAAAAGGTGCCGGTGAAGTTGGAGATGGAGGACGCTTTGGAGGACGAGCATGGCCCGCTCAACAAGCGTCCCAAACCCTCCCCTGCTTTTCAAGAGAGGAGTGTTGGGGATAATGCATTTGCTGTCCCACCTTCACAATACAATCCACTCGATGAGCCTAGCCCTTTGGGTTTGAGGCTAAGAAAGAGCCCATCTCTATTGGAGTTAATTCAAATGAAGCTCGCTCAGGGGGGTGCTTCTACAACTGGAGCTGTACAAAGTGAAAATGCCAGCTCTGCAGTTAAAAAAGAAAGTAAAGCAACTGCTGCAGTGGGTACTACGGATAAGCTCAAGGCTTCAAATTTTCCAGCTTCACTTTTAAGGATTGGGGGTTGGGAGTATAAATCAAGATATGAGGGAGATTTAGTGGCGAAGTGTTACTTTGCTAAGCATAAGCTTGTTTGGGAAGTTCTCGAAGGTGGTCTCAAGAGTAAAATAGAAATCCAGTGGTCAGATATTATGGCTCTCAAAGCAAATTGTCCGGATGATGGACCTGGTACTTTGACTGTTGTGCTGGCTAGACAACCTCTTTTCTTCAGGGAGACTAACCCTCAGCCTAGAAAGCATACCTTATGGCAGGCAACAGCAGATTTTACTGATGGACAAGCGAGCATTCATAGGCAACATTTTCTGCAATGTCCACAAGGACTGTTAAACAAACACTTTGAAAAGCTTATCCAGTGCGACACGCGGCTTTGTTTCTTAAGCCGACAGTCAGAAATTGTTTTGGAATCACCATGTTTTGAACCACGGTCTTCTGCTTTCGAAGATCCAGAATCCAAAGACCATGGTTTTGATCCACTGGGAAATGGTAATGGTTCCTCCGTCTCTGGGTTCCAAGATGTAGCATCACCATCTGCCAGTCAATCATCGTCTTTGAAGATCGATCAGCAGGATACAGCTTCTATGGCATTGGAACATCAGTCCAGAGAAGCGCCTTCCCCCAGCTCAGTTATGGATGCTCGTGCAATTGAAGGAAATGGAAGTTCTGAAGCTGTTGATTCCAGGGGGCCCAAAAATCGTGTACAAATGAAAGTGCCTGGGCTTCATCCATCAATGTCGATGAGTGATCTTATGAGTCACATTGGGAACTGTATTTCAGAACAAATGACTTCTGGAAATCCGTCTTCTGCTGACCAACAGTCAGAATACCAGGACATGCTCGAGGACATTGCCCAATACTTGCTCAGCGACAATCAATTTACAGCAGCCTCGGATGAGAAATCCCTCATGTCAAGGGTCAATTCTCTTTGTTGCCTTCTGCAGAAGGACCCTGGTTCAGTTCAGAATATGGTTGATGGTGAAAGTAGTGGTGAAGGACAAGATGGTGGAAGTGATGCTCAGCTTAATCATACTCCTGATAATAAATCTGGAGCCAATACAAAGGATCCTGAAGATGATACGAAGGATGCTTCTGGTGGGAAGAAGGCAACAGGCATGTCAAGGAAAGACTCCTTTGGGGAACTGCTGTTTCATCTGCCTCGCATTGCCTCACTTCCCTCACTTCCGAAAGTCTTGTTCAACATTTCAGAAGAAGATTGCGAGAGCCAAGCCAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

549

Amino Acids

59.51

Weight (kDa)

5.21

Isoelectric Point (pI)

54.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24100 AT4G30780
fragaria_vesca FvH4_4g10180
malus_domestica MD00G1164000.v1.1 MD16G1259500.v1.1
prunus_persica Prupe.1G102300_v2.0.a1
pyrus_communis pycom13g28620 pycom16g22740
rosa_chinensis RchiOBHm_Chr4g0405561
rosa_laevigata RLG00000008836
rosa_multiflora Rmu_sc0005023.1_g000013
rosa_roxburghii Rroxscaffold_5G00350070
rosa_rugosa Rorug04G0060600 Rorug04G0060600
rosa_samantha Rh4AG132500 Rh4BG127400 Rh4CG140200 Rh4DG126800
rosa_wichuraiana Rw4G010730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 55
AccBSI CCGCTC 1 cut(s) 106
AccII CGCG 1 cut(s) 778
AccIII TCCGGA 1 cut(s) 568
AciI CCGC 2 cut(s) 104, 778
AclWI GGATC 4 cut(s) 851, 878, 1469, 1482
AcsI RAATTY 1 cut(s) 388
AcuI CTGAAG 3 cut(s) 607, 1098, 1500
AcyI GRCGYC 1 cut(s) 38
AfaI GTAC 5 cut(s) 46, 303, 364, 586, 1113
AfiI CCNNNNNNNGG 2 cut(s) 575, 918
AflII CTTAAG 1 cut(s) 790
AgsI TTSAA 8 cut(s) 140, 260, 387, 755, 833, 967, 1061, 1609
AhdI GACNNNNNGTC 1 cut(s) 1228
AjnI CCWGG 5 cut(s) 580, 1091, 1126, 1239, 1360
Alw26I GTCTC 3 cut(s) 515, 623, 919
AlwI GGATC 4 cut(s) 851, 878, 1469, 1482
Ama87I CYCGRG 1 cut(s) 1250
Aor13HI TCCGGA 1 cut(s) 568
AoxI GGCC 2 cut(s) 100, 1097
ApaI GGGCCC 1 cut(s) 1101
ApeKI GCWGC 2 cut(s) 353, 1295
ApoI RAATTY 1 cut(s) 388
ArsI GACNNNNNNTTYG 2 cut(s) 863, 895
AspLEI GCGC 1 cut(s) 1024
AspS9I GGNCC 5 cut(s) 101, 578, 1097, 1098, 1357
AsuHPI GGTGA 5 cut(s) 73, 813, 930, 1400, 1412
AsuII TTCGAA 1 cut(s) 852
AvaI CYCGRG 1 cut(s) 1250
AvaII GGWCC 2 cut(s) 578, 1357
BaeGI GKGCMC 1 cut(s) 1101
BamHI GGATCC 1 cut(s) 1474
BanI GGYRCC 1 cut(s) 55
BanII GRGCYC 2 cut(s) 239, 1101
BauI CACGAG 1 cut(s) 1050
BbsI GAAGAC 2 cut(s) 834, 1206
BbvCI CCTCAGC 1 cut(s) 639
BbvI GCAGC 2 cut(s) 340, 1307
BccI CCATC 8 cut(s) 67, 247, 569, 680, 949, 1147, 1379, 1406
BceAI ACGGC 1 cut(s) 25
BcgI CGANNNNNNTGC 2 cut(s) 1241, 1275
BciT130I CCWGG 5 cut(s) 582, 1093, 1128, 1241, 1362
BciVI GTATCC 1 cut(s) 976
BcoDI GTCTC 3 cut(s) 515, 623, 919
BfaI CTAG 3 cut(s) 207, 606, 645
BfmI CTRYAG 3 cut(s) 324, 354, 1349
BfoI RGCGCY 1 cut(s) 1025
BfrI CTTAAG 1 cut(s) 790
BfuI GTATCC 1 cut(s) 976
BglII AGATCT 1 cut(s) 25
BisI GCNGC 3 cut(s) 354, 779, 1296
BlpI GCTNAGC 3 cut(s) 474, 1274, 1428
BlsI GCNGC 3 cut(s) 355, 780, 1297
Bme1390I CCNGG 5 cut(s) 582, 1093, 1128, 1241, 1362
Bme18I GGWCC 2 cut(s) 578, 1357
BmeRI GACNNNNNGTC 1 cut(s) 1228
BmeT110I CYCGRG 1 cut(s) 1250
BmgT120I GGNCC 5 cut(s) 101, 578, 1097, 1098, 1357
BmiI GGNNCC 8 cut(s) 57, 907, 923, 1098, 1099, 1359, 1462, 1476
BmrFI CCNGG 5 cut(s) 582, 1093, 1128, 1241, 1362
BmrI ACTGGG 1 cut(s) 899
BmsI GCATC 4 cut(s) 944, 1036, 1414, 1486
BmuI ACTGGG 1 cut(s) 899
BpiI GAAGAC 2 cut(s) 834, 1206
BplI GAGNNNNNCTC 2 cut(s) 226, 258
BpmI CTGGAG 3 cut(s) 42, 315, 1479
Bpu10I CCTNAGC 2 cut(s) 273, 639
Bpu1102I GCTNAGC 3 cut(s) 474, 1274, 1428
Bpu14I TTCGAA 1 cut(s) 852
BpuEI CTTGAG 2 cut(s) 362, 497
Bsa29I ATCGAT 1 cut(s) 972
BsaHI GRCGYC 1 cut(s) 38
BsaI GGTCTC 1 cut(s) 515
BsaJI CCNNGG 6 cut(s) 836, 874, 1092, 1127, 1299, 1360
BsaWI WCCGGW 1 cut(s) 568
BsaXI ACNNNNNCTCC 2 cut(s) 438, 468
Bsc4I CCNNNNNNNGG 2 cut(s) 575, 918
Bse118I RCCGGY 1 cut(s) 58
Bse1I ACTGG 5 cut(s) 298, 532, 766, 894, 948
Bse3DI GCAATG 3 cut(s) 728, 1257, 1572
BseAI TCCGGA 1 cut(s) 568
BseBI CCWGG 5 cut(s) 582, 1093, 1128, 1241, 1362
BseCI ATCGAT 1 cut(s) 972
BseDI CCNNGG 6 cut(s) 836, 874, 1092, 1127, 1299, 1360
BseGI GGATG 5 cut(s) 577, 1051, 1135, 1309, 1501
BseLI CCNNNNNNNGG 2 cut(s) 575, 918
BseMI GCAATG 3 cut(s) 728, 1257, 1572
BseMII CTCAG 5 cut(s) 287, 653, 1050, 1288, 1442
BseNI ACTGG 5 cut(s) 298, 532, 766, 894, 948
BseRI GAGGAG 1 cut(s) 160
BseSI GKGCMC 1 cut(s) 1101
BseXI GCAGC 2 cut(s) 340, 1307
BseYI CCCAGC 1 cut(s) 1031
Bsh1236I CGCG 1 cut(s) 778
BshFI GGCC 2 cut(s) 102, 1099
BshNI GGYRCC 1 cut(s) 55
BshVI ATCGAT 1 cut(s) 972
BsiHKCI CYCGRG 1 cut(s) 1250
BsiSI CCGG 2 cut(s) 59, 569
BslFI GGGAC 2 cut(s) 102, 158
BslI CCNNNNNNNGG 2 cut(s) 575, 918
BsmAI GTCTC 3 cut(s) 515, 623, 919
BsmBI CGTCTC 1 cut(s) 919
BsmFI GGGAC 2 cut(s) 102, 158
BsmI GAATGC 1 cut(s) 699
BsnI GGCC 2 cut(s) 102, 1099
Bso31I GGTCTC 1 cut(s) 515
BsoBI CYCGRG 1 cut(s) 1250
Bsp119I TTCGAA 1 cut(s) 852
Bsp120I GGGCCC 1 cut(s) 1097
Bsp1286I GDGCHC 2 cut(s) 239, 1101
Bsp13I TCCGGA 1 cut(s) 568
Bsp1407I TGTACA 2 cut(s) 301, 1111
Bsp143I GATC 7 cut(s) 25, 856, 883, 969, 973, 1156, 1474
Bsp1720I GCTNAGC 3 cut(s) 474, 1274, 1428
Bsp19I CCATGG 1 cut(s) 874
BspACI CCGC 2 cut(s) 104, 778
BspANI GGCC 2 cut(s) 102, 1099
BspCNI CTCAG 5 cut(s) 286, 652, 1049, 1287, 1441
BspDI ATCGAT 1 cut(s) 972
BspEI TCCGGA 1 cut(s) 568
BspFNI CGCG 1 cut(s) 778
BspLI GGNNCC 8 cut(s) 57, 907, 923, 1098, 1099, 1359, 1462, 1476
BspMAI CTGCAG 3 cut(s) 328, 358, 1353
BspPI GGATC 4 cut(s) 851, 878, 1469, 1482
BspT104I TTCGAA 1 cut(s) 852
BspT107I GGYRCC 1 cut(s) 55
BspTI CTTAAG 1 cut(s) 790
BspTNI GGTCTC 1 cut(s) 515
BsrBI CCGCTC 1 cut(s) 106
BsrDI GCAATG 3 cut(s) 728, 1257, 1572
BsrFI RCCGGY 1 cut(s) 58
BsrGI TGTACA 2 cut(s) 301, 1111
BsrI ACTGG 5 cut(s) 298, 532, 766, 894, 948
BssAI RCCGGY 1 cut(s) 58
BssECI CCNNGG 6 cut(s) 836, 874, 1092, 1127, 1299, 1360
BssMI GATC 7 cut(s) 25, 856, 883, 969, 973, 1156, 1474
BssNI GRCGYC 1 cut(s) 38
BssSI CACGAG 1 cut(s) 1050
BssT1I CCWWGG 1 cut(s) 874
Bst2BI CACGAG 1 cut(s) 1050
Bst2UI CCWGG 5 cut(s) 582, 1093, 1128, 1241, 1362
Bst4CI ACNGT 6 cut(s) 595, 738, 801, 840, 1181, 1230
BstACI GRCGYC 1 cut(s) 38
BstAFI CTTAAG 1 cut(s) 790
BstAPI GCANNNNNTGC 1 cut(s) 353
BstAUI TGTACA 2 cut(s) 301, 1111
BstBI TTCGAA 1 cut(s) 852
BstC8I GCNNGC 6 cut(s) 104, 270, 319, 603, 666, 697
BstDEI CTNAG 7 cut(s) 227, 273, 474, 639, 1036, 1274, 1428
BstDSI CCRYGG 2 cut(s) 836, 874
BstF5I GGATG 5 cut(s) 577, 1051, 1135, 1309, 1501
BstFNI CGCG 1 cut(s) 778
BstH2I RGCGCY 1 cut(s) 1025
BstHHI GCGC 1 cut(s) 1024
BstKTI GATC 7 cut(s) 28, 859, 886, 972, 976, 1159, 1477
BstMAI GTCTC 3 cut(s) 515, 623, 919
BstMBI GATC 7 cut(s) 25, 856, 883, 969, 973, 1156, 1474
BstMWI GCNNNNNNNGC 7 cut(s) 103, 112, 323, 353, 557, 649, 995
BstNI CCWGG 5 cut(s) 582, 1093, 1128, 1241, 1362
BstNSI RCATGY 2 cut(s) 1249, 1528
BstSCI CCNGG 5 cut(s) 580, 1091, 1126, 1239, 1360
BstSFI CTRYAG 3 cut(s) 324, 354, 1349
BstSLI GKGCMC 1 cut(s) 1101
BstUI CGCG 1 cut(s) 778
BstV1I GCAGC 2 cut(s) 340, 1307
BstV2I GAAGAC 2 cut(s) 834, 1206
BstX2I RGATCY 3 cut(s) 25, 856, 1474
BstYI RGATCY 3 cut(s) 25, 856, 1474
Bsu15I ATCGAT 1 cut(s) 972
BsuI GTATCC 1 cut(s) 976
BsuRI GGCC 2 cut(s) 102, 1099
BsuTUI ATCGAT 1 cut(s) 972
BtgI CCRYGG 2 cut(s) 836, 874
BtsCI GGATG 5 cut(s) 577, 1051, 1135, 1309, 1501
BtsI GCAGTG 1 cut(s) 363
BtsIMutI CAGTG 4 cut(s) 363, 539, 773, 887
Cac8I GCNNGC 6 cut(s) 104, 270, 319, 603, 666, 697
CfoI GCGC 1 cut(s) 1024
Cfr10I RCCGGY 1 cut(s) 58
Cfr13I GGNCC 5 cut(s) 101, 578, 1097, 1098, 1357
ClaI ATCGAT 1 cut(s) 972
CseI GACGC 3 cut(s) 46, 89, 104
CsiI ACCWGGT 1 cut(s) 580
Csp6I GTAC 5 cut(s) 45, 302, 363, 585, 1112
CviAII CATG 6 cut(s) 98, 825, 875, 1246, 1318, 1525
CviQI GTAC 5 cut(s) 45, 302, 363, 585, 1112
DdeI CTNAG 7 cut(s) 227, 273, 474, 639, 1036, 1274, 1428
DpnI GATC 7 cut(s) 27, 858, 885, 971, 975, 1158, 1476
DpnII GATC 7 cut(s) 25, 856, 883, 969, 973, 1156, 1474
DriI GACNNNNNGTC 1 cut(s) 1228
Eam1105I GACNNNNNGTC 1 cut(s) 1228
Eco130I CCWWGG 1 cut(s) 874
Eco24I GRGCYC 2 cut(s) 239, 1101
Eco31I GGTCTC 1 cut(s) 515
Eco47I GGWCC 2 cut(s) 578, 1357
Eco57I CTGAAG 3 cut(s) 607, 1098, 1500
Eco88I CYCGRG 1 cut(s) 1250
EcoO109I RGGNCCY 2 cut(s) 1097, 1357
EcoRII CCWGG 5 cut(s) 580, 1091, 1126, 1239, 1360
EcoT14I CCWWGG 1 cut(s) 874
EcoT22I ATGCAT 1 cut(s) 166
EcoT38I GRGCYC 2 cut(s) 239, 1101
ErhI CCWWGG 1 cut(s) 874
Esp3I CGTCTC 1 cut(s) 919
FaeI CATG 6 cut(s) 101, 828, 878, 1249, 1321, 1528
FalI AAGNNNNNCTT 4 cut(s) 452, 484, 641, 673
FaqI GGGAC 2 cut(s) 102, 158
FatI CATG 6 cut(s) 97, 824, 874, 1245, 1317, 1524
FauI CCCGC 1 cut(s) 111
FauNDI CATATG 1 cut(s) 9
Fnu4HI GCNGC 3 cut(s) 354, 779, 1296
FokI GGATG 5 cut(s) 584, 1058, 1122, 1316, 1508
FriOI GRGCYC 2 cut(s) 239, 1101
Fsp4HI GCNGC 3 cut(s) 354, 779, 1296
FspBI CTAG 3 cut(s) 207, 606, 645
GlaI GCGC 1 cut(s) 1023
GluI GCNGC 3 cut(s) 354, 779, 1296
GsaI CCCAGC 1 cut(s) 1035
GsuI CTGGAG 3 cut(s) 42, 315, 1479
HaeII RGCGCY 1 cut(s) 1025
HaeIII GGCC 2 cut(s) 102, 1099
HapII CCGG 2 cut(s) 59, 569
HgaI GACGC 3 cut(s) 46, 89, 104
HhaI GCGC 1 cut(s) 1024
Hin1I GRCGYC 1 cut(s) 38
Hin1II CATG 6 cut(s) 101, 828, 878, 1249, 1321, 1528
Hin6I GCGC 1 cut(s) 1022
HinP1I GCGC 1 cut(s) 1022
HindIII AAGCTT 2 cut(s) 482, 758
HinfI GANTC 5 cut(s) 818, 863, 1088, 1165, 1538
HpaII CCGG 2 cut(s) 59, 569
HphI GGTGA 5 cut(s) 73, 813, 930, 1400, 1412
Hpy166II GTNNAC 3 cut(s) 45, 728, 1112
Hpy188I TCNGA 9 cut(s) 541, 805, 1078, 1189, 1234, 1303, 1374, 1596, 1618
Hpy8I GTNNAC 3 cut(s) 45, 728, 1112
Hpy99I CGWCG 1 cut(s) 40
HpyAV CCTTC 9 cut(s) 189, 497, 1035, 1055, 1348, 1355, 1397, 1486, 1507
HpyCH4III ACNGT 6 cut(s) 595, 738, 801, 840, 1181, 1230
HpyCH4V TGCA 7 cut(s) 7, 164, 326, 356, 721, 1055, 1351
HpyF10VI GCNNNNNNNGC 7 cut(s) 103, 112, 323, 353, 557, 649, 995
HpyF3I CTNAG 7 cut(s) 227, 273, 474, 639, 1036, 1274, 1428
Hsp92I GRCGYC 1 cut(s) 38
Hsp92II CATG 6 cut(s) 101, 828, 878, 1249, 1321, 1528
HspAI GCGC 1 cut(s) 1022
Kpn2I TCCGGA 1 cut(s) 568
Kzo9I GATC 7 cut(s) 25, 856, 883, 969, 973, 1156, 1474
LmnI GCTCC 2 cut(s) 296, 1460
Lsp1109I GCAGC 2 cut(s) 340, 1307
LweI GCATC 4 cut(s) 944, 1036, 1414, 1486
MabI ACCWGGT 1 cut(s) 580
MaeI CTAG 3 cut(s) 207, 606, 645
MaeIII GTNAC 2 cut(s) 464, 1166
MalI GATC 7 cut(s) 27, 858, 885, 971, 975, 1158, 1476
MbiI CCGCTC 1 cut(s) 106
MboI GATC 7 cut(s) 25, 856, 883, 969, 973, 1156, 1474
MboII GAAGA 9 cut(s) 613, 834, 866, 979, 1206, 1493, 1522, 1631, 1634
MfeI CAATTG 1 cut(s) 1056
MflI RGATCY 3 cut(s) 25, 856, 1474
MhlI GDGCHC 2 cut(s) 239, 1101
MluCI AATT 7 cut(s) 255, 388, 562, 807, 1056, 1286, 1330
MlyI GAGTC 2 cut(s) 1174, 1532
MmeI TCCRAC 1 cut(s) 48
Mph1103I ATGCAT 1 cut(s) 166
MroI TCCGGA 1 cut(s) 568
MseI TTAA 6 cut(s) 254, 330, 407, 740, 791, 1434
MspCI CTTAAG 1 cut(s) 790
MspI CCGG 2 cut(s) 59, 569
MspR9I CCNGG 5 cut(s) 582, 1093, 1128, 1241, 1362
MunI CAATTG 1 cut(s) 1056
Mva1269I GAATGC 1 cut(s) 699
MvaI CCWGG 5 cut(s) 582, 1093, 1128, 1241, 1362
MvnI CGCG 1 cut(s) 778
MwoI GCNNNNNNNGC 7 cut(s) 103, 112, 323, 353, 557, 649, 995
NcoI CCATGG 1 cut(s) 874
NdeI CATATG 1 cut(s) 9
NdeII GATC 7 cut(s) 25, 856, 883, 969, 973, 1156, 1474
NlaIII CATG 6 cut(s) 101, 828, 878, 1249, 1321, 1528
NlaIV GGNNCC 8 cut(s) 57, 907, 923, 1098, 1099, 1359, 1462, 1476
NmuCI GTSAC 1 cut(s) 1166
NsiI ATGCAT 1 cut(s) 166
NspI RCATGY 2 cut(s) 1249, 1528
NspV TTCGAA 1 cut(s) 852
PaeR7I CTCGAG 1 cut(s) 1250
PctI GAATGC 1 cut(s) 699
PfeI GAWTC 3 cut(s) 818, 863, 1088
PkrI GCNGC 3 cut(s) 355, 780, 1297
PleI GAGTC 2 cut(s) 1173, 1532
PpsI GAGTC 2 cut(s) 1173, 1532
PpuMI RGGWCCY 1 cut(s) 1357
Psp5II RGGWCCY 1 cut(s) 1357
Psp6I CCWGG 5 cut(s) 580, 1091, 1126, 1239, 1360
PspFI CCCAGC 1 cut(s) 1031
PspGI CCWGG 5 cut(s) 580, 1091, 1126, 1239, 1360
PspN4I GGNNCC 8 cut(s) 57, 907, 923, 1098, 1099, 1359, 1462, 1476
PspOMI GGGCCC 1 cut(s) 1097
PspPI GGNCC 5 cut(s) 101, 578, 1097, 1098, 1357
PspPPI RGGWCCY 1 cut(s) 1357
PspXI VCTCGAGB 1 cut(s) 1250
PstI CTGCAG 3 cut(s) 328, 358, 1353
PsuI RGATCY 3 cut(s) 25, 856, 1474
RsaI GTAC 5 cut(s) 46, 303, 364, 586, 1113
RsaNI GTAC 5 cut(s) 45, 302, 363, 585, 1112
SaqAI TTAA 6 cut(s) 254, 330, 407, 740, 791, 1434
SatI GCNGC 3 cut(s) 354, 779, 1296
Sau3AI GATC 7 cut(s) 25, 856, 883, 969, 973, 1156, 1474
Sau96I GGNCC 5 cut(s) 101, 578, 1097, 1098, 1357
SchI GAGTC 2 cut(s) 1174, 1532
ScrFI CCNGG 5 cut(s) 582, 1093, 1128, 1241, 1362
SduI GDGCHC 2 cut(s) 239, 1101
SexAI ACCWGGT 1 cut(s) 580
SfaNI GCATC 4 cut(s) 944, 1036, 1414, 1486
SfcI CTRYAG 3 cut(s) 324, 354, 1349
Sfr274I CTCGAG 1 cut(s) 1250
SfuI TTCGAA 1 cut(s) 852
SinI GGWCC 2 cut(s) 578, 1357
SlaI CTCGAG 1 cut(s) 1250
SmlI CTYRAG 4 cut(s) 377, 512, 790, 1250
SmoI CTYRAG 4 cut(s) 377, 512, 790, 1250
Sse9I AATT 7 cut(s) 255, 388, 562, 807, 1056, 1286, 1330
SsiI CCGC 2 cut(s) 104, 778
SspMI CTAG 3 cut(s) 207, 606, 645
StyD4I CCNGG 5 cut(s) 580, 1091, 1126, 1239, 1360
StyI CCWWGG 1 cut(s) 874
TaaI ACNGT 6 cut(s) 595, 738, 801, 840, 1181, 1230
TaqI TCGA 6 cut(s) 198, 501, 852, 972, 1148, 1251
TasI AATT 7 cut(s) 255, 388, 562, 807, 1056, 1286, 1330
TatI WGTACW 2 cut(s) 301, 1111
TauI GCSGC 1 cut(s) 781
TfiI GAWTC 3 cut(s) 818, 863, 1088
Tru1I TTAA 6 cut(s) 254, 330, 407, 740, 791, 1434
Tru9I TTAA 6 cut(s) 254, 330, 407, 740, 791, 1434
TscAI CASTG 4 cut(s) 363, 539, 773, 894
TseFI GTSAC 1 cut(s) 1166
TseI GCWGC 2 cut(s) 353, 1295
Tsp45I GTSAC 1 cut(s) 1166
TspDTI ATGAA 6 cut(s) 29, 278, 692, 1124, 1133, 1550
TspGWI ACGGA 4 cut(s) 62, 383, 901, 1200
TspRI CASTG 4 cut(s) 363, 539, 773, 894
Vha464I CTTAAG 1 cut(s) 790
VpaK11BI GGWCC 2 cut(s) 578, 1357
XapI RAATTY 1 cut(s) 388
XceI RCATGY 2 cut(s) 1249, 1528
XcmI CCANNNNNNNNNTGG 1 cut(s) 1039
XhoI CTCGAG 1 cut(s) 1250
XspI CTAG 3 cut(s) 207, 606, 645
Zsp2I ATGCAT 1 cut(s) 166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.