rna polymerase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATCG00190 |
| malus_domestica | MD01G1093300.v1.1 MD16G1169300.v1.1 |
| pyrus_communis | pycom12397g00320 pycom14g07090 |
| rosa_chinensis | RchiOBHm_CPg0502401 |
| rosa_laevigata | RLG00000000047 RLG00000000087 RLG00000000116 RLG00000000175 RLG00000000231 RLG00000000246 RLG00000000284 RLG00000000299 RLG00000000300 RLG00000000314 RLG00000000318 RLG00000000340 |
| rosa_multiflora | Rmu_sc0002986.1_g000010 Rmu_sc0008812.1_g000013 Rmu_sc0011830.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00119070 |
| rosa_rugosa | Rorug02G0490800 RorugMtG0001900 |
| rosa_samantha | Rh2AG293900 Rh2AG294000 Rh2DG317800 Rh2DG317900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 12 |
| AclI | AACGTT | 1 cut(s) | 118 |
| AcsI | RAATTY | 1 cut(s) | 189 |
| Alw21I | GWGCWC | 1 cut(s) | 144 |
| Alw44I | GTGCAC | 1 cut(s) | 140 |
| ApaLI | GTGCAC | 1 cut(s) | 140 |
| ApeKI | GCWGC | 1 cut(s) | 206 |
| ApoI | RAATTY | 1 cut(s) | 189 |
| BaeGI | GKGCMC | 1 cut(s) | 144 |
| Bbv12I | GWGCWC | 1 cut(s) | 144 |
| BbvI | GCAGC | 1 cut(s) | 193 |
| BccI | CCATC | 1 cut(s) | 194 |
| BclI | TGATCA | 1 cut(s) | 63 |
| BfmI | CTRYAG | 1 cut(s) | 19 |
| BfuAI | ACCTGC | 1 cut(s) | 12 |
| BisI | GCNGC | 1 cut(s) | 207 |
| BlsI | GCNGC | 1 cut(s) | 208 |
| BsaAI | YACGTR | 1 cut(s) | 237 |
| BsaJI | CCNNGG | 1 cut(s) | 153 |
| BseDI | CCNNGG | 1 cut(s) | 153 |
| BseSI | GKGCMC | 1 cut(s) | 144 |
| BseXI | GCAGC | 1 cut(s) | 193 |
| BsiHKAI | GWGCWC | 1 cut(s) | 144 |
| BslFI | GGGAC | 1 cut(s) | 198 |
| BsmFI | GGGAC | 1 cut(s) | 198 |
| Bsp1286I | GDGCHC | 1 cut(s) | 144 |
| Bsp143I | GATC | 1 cut(s) | 63 |
| BspMAI | CTGCAG | 1 cut(s) | 23 |
| BspMI | ACCTGC | 1 cut(s) | 12 |
| BssECI | CCNNGG | 1 cut(s) | 153 |
| BssMI | GATC | 1 cut(s) | 63 |
| BssT1I | CCWWGG | 1 cut(s) | 153 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 203 |
| BstBAI | YACGTR | 1 cut(s) | 237 |
| BstKTI | GATC | 1 cut(s) | 66 |
| BstMBI | GATC | 1 cut(s) | 63 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 203 |
| BstSFI | CTRYAG | 1 cut(s) | 19 |
| BstSLI | GKGCMC | 1 cut(s) | 144 |
| BstV1I | GCAGC | 1 cut(s) | 193 |
| BveI | ACCTGC | 1 cut(s) | 12 |
| CviAII | CATG | 1 cut(s) | 61 |
| CviJI | RGCY | 1 cut(s) | 86 |
| CviKI_1 | RGCY | 1 cut(s) | 86 |
| DpnI | GATC | 1 cut(s) | 65 |
| DpnII | GATC | 1 cut(s) | 63 |
| Eco130I | CCWWGG | 1 cut(s) | 153 |
| EcoT14I | CCWWGG | 1 cut(s) | 153 |
| ErhI | CCWWGG | 1 cut(s) | 153 |
| FaeI | CATG | 1 cut(s) | 64 |
| FaiI | YATR | 3 cut(s) | 62, 110, 112 |
| FaqI | GGGAC | 1 cut(s) | 198 |
| FatI | CATG | 1 cut(s) | 60 |
| FbaI | TGATCA | 1 cut(s) | 63 |
| Fnu4HI | GCNGC | 1 cut(s) | 207 |
| Fsp4HI | GCNGC | 1 cut(s) | 207 |
| GluI | GCNGC | 1 cut(s) | 207 |
| Hin1II | CATG | 1 cut(s) | 64 |
| Hpy166II | GTNNAC | 1 cut(s) | 142 |
| Hpy8I | GTNNAC | 1 cut(s) | 142 |
| HpyCH4IV | ACGT | 2 cut(s) | 118, 236 |
| HpyCH4V | TGCA | 3 cut(s) | 21, 142, 234 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 203 |
| HpySE526I | ACGT | 2 cut(s) | 118, 236 |
| Hsp92II | CATG | 1 cut(s) | 64 |
| Ksp22I | TGATCA | 1 cut(s) | 63 |
| Kzo9I | GATC | 1 cut(s) | 63 |
| LpnPI | CCDG | 1 cut(s) | 7 |
| Lsp1109I | GCAGC | 1 cut(s) | 193 |
| MaeII | ACGT | 2 cut(s) | 118, 236 |
| MalI | GATC | 1 cut(s) | 65 |
| MboI | GATC | 1 cut(s) | 63 |
| MhlI | GDGCHC | 1 cut(s) | 144 |
| MluCI | AATT | 1 cut(s) | 189 |
| MmeI | TCCRAC | 1 cut(s) | 147 |
| MseI | TTAA | 2 cut(s) | 9, 177 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 203 |
| NdeII | GATC | 1 cut(s) | 63 |
| NlaIII | CATG | 1 cut(s) | 64 |
| PkrI | GCNGC | 1 cut(s) | 208 |
| Ppu21I | YACGTR | 1 cut(s) | 237 |
| Psp1406I | AACGTT | 1 cut(s) | 118 |
| PstI | CTGCAG | 1 cut(s) | 23 |
| SaqAI | TTAA | 2 cut(s) | 9, 177 |
| SatI | GCNGC | 1 cut(s) | 207 |
| Sau3AI | GATC | 1 cut(s) | 63 |
| SduI | GDGCHC | 1 cut(s) | 144 |
| SetI | ASST | 6 cut(s) | 26, 40, 121, 159, 169, 239 |
| SfcI | CTRYAG | 1 cut(s) | 19 |
| SgeI | CNNG | 5 cut(s) | 34, 73, 147, 166, 176 |
| Sse9I | AATT | 1 cut(s) | 189 |
| StyI | CCWWGG | 1 cut(s) | 153 |
| TaiI | ACGT | 2 cut(s) | 121, 239 |
| TasI | AATT | 1 cut(s) | 189 |
| Tru1I | TTAA | 2 cut(s) | 9, 177 |
| Tru9I | TTAA | 2 cut(s) | 9, 177 |
| TseI | GCWGC | 1 cut(s) | 206 |
| VneI | GTGCAC | 1 cut(s) | 140 |
| XapI | RAATTY | 1 cut(s) | 189 |