MD01G1110700.v1.1

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
22319798 .. 22325292
5495 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1110700.v1.1.491

Sequence Viewer

Length: 1368 bp
ATGGGTGGTCACTCTCCATTTGCATTTCTCTGCATTTTGCTTCTTTTCTTGGGAGGTTGTTTTGCTTCTATTCAAGATCAAGTGAGGGATAGAATCACACAATTGCCAGGACAGCCAAATGTGGGGTTTGCTCAGTACTCCGGTTATGTGACTGTCAATAGGAAGGCCGGTAGGGCATTGTTTTACTGGTTGACTGAATCCCCGGAAAATCGCCAACCCGAGTCTAGACCTCTAGTGTTGTGGCTCAATGGTGGCCCTGGTTGCTCTTCTGTTGCTTATGGAGCAGCTGAAGAGATTGGAGCTTTTCATATTAGACCTGATGGAAAGACCCTTTACTTGAATCCCTATGCTTGGAACAATTTGGCAAATTTGCTATTCCTTGAATCTCCAGCTGGTGTCGGTTTTTCATATACGAATACAAGCTCAGATTTGTATACAGCCGGAGACCAGAGAACAGCCGAAGATGCATATGCATTTCTAGTCAATTGGTTTGAAAGGTTTCCACAGTACAAGCACAGAGATTTCTACATTGCTGGAGAAAGTTATGCAGGTCATTATGTTCCTCAGTTGTCTCAAATCATTTATGAGAGAAATAAGGGAAAGCAGAACCCAATTATTAATTTCAAGGGATTCATGGTGGGAAATGCTGTGACTGATGATTACCATGATTTTATTGGCACGTTTGAATACTGGTGGAACCATGGTTTAATTTCTGATTCTACCTATCGGGTGCTACGTGTAACCTGTGACCTTGGATCCTCTCAGCATCCATCAGTGGAATGCATGAGGGCGCTTAAAATAGCAGAAACGGAGCAGGGAAATATCGATCCATACAGTATTTATACTCGTCCTTGCAATAGCACTGCATCCTTAAAGCGCAATTTGAGGGGTCACTACCCATGGATGTCCAGAGCATATGATCCCTGCACTGAGAGGTATTCTGAAGTGTATTTCAACCGTCCAGACGTTCAAAAGGCACTCCATGCCAATGTAACTAGAGTTTCTTACCCATGGAAAACATGCAGTGATATTGTTGGAAACTACTGGGCCGATTCTCCATTGTCCATGCTTCCTATTTACAAGGAGCTCATAGCAGCTGGTCTTAGGATATGGGTATTCAGTGGAGACACTGATTCGGTGGTTCCTGTGACTGCAACTCGTTACTCCATAGATGCTCTGAAGCTACCAACCATTACCAACTGGTACCCATGGAACGACAATGGAAAGGTTGGTGGCTGGAGCCAAGTATACAAGGGGCTGACATTTGTCACTGTGACCGGAGCTGGGCACGAGGTTCCCCTCCACCGACCCCGCCTAGCTTTCATCCTTTTCCGATCATTCTTGGGGAGCAAGGCCATGCCAAGTTAG

Protein Analysis

456

Amino Acids

51.39

Weight (kDa)

8.01

Isoelectric Point (pI)

41.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 36 - 448 1.1e-148 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 539
Acc65I GGTACC 1 cut(s) 1203
AccB1I GGYRCC 1 cut(s) 1203
AccI GTMKAC 2 cut(s) 434, 1248
AciI CCGC 1 cut(s) 1312
AclWI GGATC 4 cut(s) 750, 763, 821, 914
AcsI RAATTY 1 cut(s) 367
AcuI CTGAAG 3 cut(s) 309, 963, 1199
AfaI GTAC 3 cut(s) 137, 509, 1205
AfiI CCNNNNNNNGG 3 cut(s) 122, 351, 1284
AflIII ACRYGT 1 cut(s) 736
AgsI TTSAA 8 cut(s) 74, 340, 383, 494, 625, 686, 955, 971
AjnI CCWGG 2 cut(s) 106, 256
AluBI AGCT 9 cut(s) 287, 302, 392, 423, 1087, 1097, 1183, 1283, 1319
AluI AGCT 9 cut(s) 287, 302, 392, 423, 1087, 1097, 1183, 1283, 1319
Alw21I GWGCWC 1 cut(s) 1089
Alw26I GTCTC 3 cut(s) 438, 576, 1119
AlwI GGATC 4 cut(s) 750, 763, 821, 914
Ama87I CYCGRG 1 cut(s) 218
AoxI GGCC 4 cut(s) 165, 253, 1047, 1353
ApeKI GCWGC 2 cut(s) 284, 1094
ApoI RAATTY 1 cut(s) 367
AseI ATTAAT 1 cut(s) 618
Asp700I GAANNNNTTC 1 cut(s) 498
Asp718I GGTACC 1 cut(s) 1203
AspLEI GCGC 2 cut(s) 793, 879
AspS9I GGNCC 2 cut(s) 254, 1047
AsuC2I CCSGG 1 cut(s) 203
AvaI CYCGRG 1 cut(s) 218
BaeGI GKGCMC 1 cut(s) 1290
BamHI GGATCC 1 cut(s) 755
BanI GGYRCC 1 cut(s) 1203
BanII GRGCYC 1 cut(s) 1089
BauI CACGAG 1 cut(s) 1289
Bbv12I GWGCWC 1 cut(s) 1089
BbvI GCAGC 2 cut(s) 296, 1106
BccI CCATC 2 cut(s) 314, 778
BciT130I CCWGG 2 cut(s) 108, 258
BcnI CCSGG 1 cut(s) 203
BcoDI GTCTC 3 cut(s) 438, 576, 1119
BfaI CTAG 5 cut(s) 225, 233, 479, 996, 1316
BfoI RGCGCY 1 cut(s) 794
BfuAI ACCTGC 1 cut(s) 539
BglI GCCNNNNNGGC 1 cut(s) 173
BisI GCNGC 2 cut(s) 285, 1095
BlsI GCNGC 2 cut(s) 286, 1096
BmcAI AGTACT 1 cut(s) 137
Bme1390I CCNGG 3 cut(s) 108, 203, 258
BmeT110I CYCGRG 1 cut(s) 218
BmgT120I GGNCC 2 cut(s) 254, 1047
BmiI GGNNCC 6 cut(s) 698, 757, 1143, 1205, 1241, 1296
BmrFI CCNGG 3 cut(s) 108, 203, 258
BmrI ACTGGG 1 cut(s) 1054
BmsI GCATC 4 cut(s) 454, 775, 875, 1162
BmuI ACTGGG 1 cut(s) 1054
BoxI GACNNNNGTC 1 cut(s) 1265
BpmI CTGGAG 3 cut(s) 372, 555, 1258
BpuMI CCSGG 1 cut(s) 203
Bsa29I ATCGAT 1 cut(s) 825
BsaAI YACGTR 1 cut(s) 737
BsaI GGTCTC 1 cut(s) 438
BsaJI CCNNGG 7 cut(s) 201, 256, 700, 751, 899, 1010, 1208
BsaWI WCCGGW 2 cut(s) 140, 1277
Bsc4I CCNNNNNNNGG 3 cut(s) 122, 351, 1284
Bse118I RCCGGY 1 cut(s) 167
Bse1I ACTGG 4 cut(s) 191, 695, 1049, 1205
Bse3DI GCAATG 1 cut(s) 528
BseBI CCWGG 2 cut(s) 108, 258
BseCI ATCGAT 1 cut(s) 825
BseDI CCNNGG 7 cut(s) 201, 256, 700, 751, 899, 1010, 1208
BseGI GGATG 4 cut(s) 766, 866, 909, 1323
BseLI CCNNNNNNNGG 3 cut(s) 122, 351, 1284
BseMI GCAATG 1 cut(s) 528
BseMII CTCAG 5 cut(s) 146, 438, 578, 776, 921
BseNI ACTGG 4 cut(s) 191, 695, 1049, 1205
BseSI GKGCMC 1 cut(s) 1290
BseXI GCAGC 2 cut(s) 296, 1106
BseYI CCCAGC 1 cut(s) 1283
BsgI GTGCAG 1 cut(s) 910
BshFI GGCC 4 cut(s) 167, 255, 1049, 1355
BshNI GGYRCC 1 cut(s) 1203
BshVI ATCGAT 1 cut(s) 825
BsiHKAI GWGCWC 1 cut(s) 1089
BsiHKCI CYCGRG 1 cut(s) 218
BsiSI CCGG 5 cut(s) 141, 168, 203, 441, 1278
BslI CCNNNNNNNGG 3 cut(s) 122, 351, 1284
BsmAI GTCTC 3 cut(s) 438, 576, 1119
BsmI GAATGC 1 cut(s) 785
BsnI GGCC 4 cut(s) 167, 255, 1049, 1355
Bso31I GGTCTC 1 cut(s) 438
BsoBI CYCGRG 1 cut(s) 218
Bsp1286I GDGCHC 2 cut(s) 1089, 1290
Bsp143I GATC 5 cut(s) 76, 755, 826, 919, 1334
Bsp19I CCATGG 4 cut(s) 700, 899, 1010, 1208
BspACI CCGC 1 cut(s) 1312
BspANI GGCC 4 cut(s) 167, 255, 1049, 1355
BspCNI CTCAG 5 cut(s) 145, 437, 577, 775, 922
BspDI ATCGAT 1 cut(s) 825
BspLI GGNNCC 6 cut(s) 698, 757, 1143, 1205, 1241, 1296
BspMI ACCTGC 1 cut(s) 539
BspPI GGATC 4 cut(s) 750, 763, 821, 914
BspQI GCTCTTC 1 cut(s) 271
BspT107I GGYRCC 1 cut(s) 1203
BspTNI GGTCTC 1 cut(s) 438
BsrDI GCAATG 1 cut(s) 528
BsrFI RCCGGY 1 cut(s) 167
BsrI ACTGG 4 cut(s) 191, 695, 1049, 1205
BssAI RCCGGY 1 cut(s) 167
BssECI CCNNGG 7 cut(s) 201, 256, 700, 751, 899, 1010, 1208
BssMI GATC 5 cut(s) 76, 755, 826, 919, 1334
BssNAI GTATAC 2 cut(s) 435, 1249
BssSI CACGAG 1 cut(s) 1289
BssT1I CCWWGG 5 cut(s) 700, 751, 899, 1010, 1208
Bst1107I GTATAC 2 cut(s) 435, 1249
Bst2BI CACGAG 1 cut(s) 1289
Bst2UI CCWGG 2 cut(s) 108, 258
Bst4CI ACNGT 5 cut(s) 154, 507, 836, 959, 1273
Bst6I CTCTTC 2 cut(s) 271, 285
BstAPI GCANNNNNTGC 1 cut(s) 983
BstBAI YACGTR 1 cut(s) 737
BstDEI CTNAG 6 cut(s) 132, 424, 564, 762, 930, 1103
BstDSI CCRYGG 4 cut(s) 700, 899, 1010, 1208
BstF5I GGATG 4 cut(s) 766, 866, 909, 1323
BstH2I RGCGCY 1 cut(s) 794
BstHHI GCGC 2 cut(s) 793, 879
BstKTI GATC 5 cut(s) 79, 758, 829, 922, 1337
BstMAI GTCTC 3 cut(s) 438, 576, 1119
BstMBI GATC 5 cut(s) 76, 755, 826, 919, 1334
BstMWI GCNNNNNNNGC 6 cut(s) 112, 173, 261, 281, 464, 983
BstNI CCWGG 2 cut(s) 108, 258
BstNSI RCATGY 1 cut(s) 1023
BstPAI GACNNNNGTC 1 cut(s) 1265
BstSCI CCNGG 3 cut(s) 106, 201, 256
BstSLI GKGCMC 1 cut(s) 1290
BstV1I GCAGC 2 cut(s) 296, 1106
BstX2I RGATCY 1 cut(s) 755
BstYI RGATCY 1 cut(s) 755
BstZ17I GTATAC 2 cut(s) 435, 1249
Bsu15I ATCGAT 1 cut(s) 825
BsuRI GGCC 4 cut(s) 167, 255, 1049, 1355
BsuTUI ATCGAT 1 cut(s) 825
BtgI CCRYGG 4 cut(s) 700, 899, 1010, 1208
BtsCI GGATG 4 cut(s) 766, 866, 909, 1323
BtsI GCAGTG 2 cut(s) 861, 1030
BtsIMutI CAGTG 7 cut(s) 780, 861, 927, 1030, 1126, 1128, 1269
BveI ACCTGC 1 cut(s) 539
CfoI GCGC 2 cut(s) 793, 879
Cfr10I RCCGGY 1 cut(s) 167
Cfr13I GGNCC 2 cut(s) 254, 1047
ClaI ATCGAT 1 cut(s) 825
Csp6I GTAC 3 cut(s) 136, 508, 1204
CviQI GTAC 3 cut(s) 136, 508, 1204
DdeI CTNAG 6 cut(s) 132, 424, 564, 762, 930, 1103
DpnI GATC 5 cut(s) 78, 757, 828, 921, 1336
DpnII GATC 5 cut(s) 76, 755, 826, 919, 1334
Eam1104I CTCTTC 2 cut(s) 271, 285
EarI CTCTTC 2 cut(s) 271, 285
Ecl136II GAGCTC 1 cut(s) 1087
Eco130I CCWWGG 5 cut(s) 700, 751, 899, 1010, 1208
Eco24I GRGCYC 1 cut(s) 1089
Eco31I GGTCTC 1 cut(s) 438
Eco53kI GAGCTC 1 cut(s) 1087
Eco57I CTGAAG 3 cut(s) 309, 963, 1199
Eco88I CYCGRG 1 cut(s) 218
EcoICRI GAGCTC 1 cut(s) 1087
EcoRII CCWGG 2 cut(s) 106, 256
EcoT14I CCWWGG 5 cut(s) 700, 751, 899, 1010, 1208
EcoT22I ATGCAT 3 cut(s) 469, 475, 785
EcoT38I GRGCYC 1 cut(s) 1089
ErhI CCWWGG 5 cut(s) 700, 751, 899, 1010, 1208
FauI CCCGC 1 cut(s) 1319
FauNDI CATATG 2 cut(s) 469, 916
FblI GTMKAC 2 cut(s) 434, 1248
Fnu4HI GCNGC 2 cut(s) 285, 1095
FokI GGATG 4 cut(s) 753, 853, 916, 1310
FriOI GRGCYC 1 cut(s) 1089
Fsp4HI GCNGC 2 cut(s) 285, 1095
FspBI CTAG 5 cut(s) 225, 233, 479, 996, 1316
GlaI GCGC 2 cut(s) 792, 878
GluI GCNGC 2 cut(s) 285, 1095
GsaI CCCAGC 1 cut(s) 1287
GsuI CTGGAG 3 cut(s) 372, 555, 1258
HaeII RGCGCY 1 cut(s) 794
HaeIII GGCC 4 cut(s) 167, 255, 1049, 1355
HapII CCGG 5 cut(s) 141, 168, 203, 441, 1278
HhaI GCGC 2 cut(s) 793, 879
Hin6I GCGC 2 cut(s) 791, 877
HinP1I GCGC 2 cut(s) 791, 877
HincII GTYRAC 1 cut(s) 192
HindII GTYRAC 1 cut(s) 192
HinfI GANTC 9 cut(s) 93, 197, 221, 340, 383, 630, 716, 1052, 1133
HpaII CCGG 5 cut(s) 141, 168, 203, 441, 1278
Hpy166II GTNNAC 3 cut(s) 192, 435, 1249
Hpy188I TCNGA 5 cut(s) 427, 715, 943, 1179, 1334
Hpy188III TCNNGA 4 cut(s) 74, 225, 909, 962
Hpy8I GTNNAC 3 cut(s) 192, 435, 1249
HpyAV CCTTC 1 cut(s) 157
HpyCH4III ACNGT 5 cut(s) 154, 507, 836, 959, 1273
HpyCH4IV ACGT 3 cut(s) 680, 736, 966
HpyF10VI GCNNNNNNNGC 6 cut(s) 112, 173, 261, 281, 464, 983
HpyF3I CTNAG 6 cut(s) 132, 424, 564, 762, 930, 1103
HpySE526I ACGT 3 cut(s) 680, 736, 966
HspAI GCGC 2 cut(s) 791, 877
KpnI GGTACC 1 cut(s) 1207
Kzo9I GATC 5 cut(s) 76, 755, 826, 919, 1334
LguI GCTCTTC 1 cut(s) 271
LmnI GCTCC 7 cut(s) 281, 299, 811, 1084, 1239, 1280, 1347
Lsp1109I GCAGC 2 cut(s) 296, 1106
LweI GCATC 4 cut(s) 454, 775, 875, 1162
MaeI CTAG 5 cut(s) 225, 233, 479, 996, 1316
MaeII ACGT 3 cut(s) 680, 736, 966
MalI GATC 5 cut(s) 78, 757, 828, 921, 1336
MboI GATC 5 cut(s) 76, 755, 826, 919, 1334
MboII GAAGA 3 cut(s) 258, 302, 473
MfeI CAATTG 2 cut(s) 101, 484
MflI RGATCY 1 cut(s) 755
MhlI GDGCHC 2 cut(s) 1089, 1290
MluCI AATT 8 cut(s) 101, 358, 367, 484, 612, 619, 708, 880
MlyI GAGTC 1 cut(s) 230
MmeI TCCRAC 1 cut(s) 1015
Mph1103I ATGCAT 3 cut(s) 469, 475, 785
MroXI GAANNNNTTC 1 cut(s) 498
MseI TTAA 4 cut(s) 618, 707, 795, 872
MslI CAYNNNNRTG 1 cut(s) 987
MspA1I CMGCKG 3 cut(s) 287, 392, 1097
MspI CCGG 5 cut(s) 141, 168, 203, 441, 1278
MspR9I CCNGG 3 cut(s) 108, 203, 258
MunI CAATTG 2 cut(s) 101, 484
Mva1269I GAATGC 1 cut(s) 785
MvaI CCWGG 2 cut(s) 108, 258
MwoI GCNNNNNNNGC 6 cut(s) 112, 173, 261, 281, 464, 983
NciI CCSGG 1 cut(s) 203
NcoI CCATGG 4 cut(s) 700, 899, 1010, 1208
NdeI CATATG 2 cut(s) 469, 916
NdeII GATC 5 cut(s) 76, 755, 826, 919, 1334
NlaIV GGNNCC 6 cut(s) 698, 757, 1143, 1205, 1241, 1296
NmuCI GTSAC 8 cut(s) 8, 148, 649, 746, 890, 1147, 1267, 1273
NsiI ATGCAT 3 cut(s) 469, 475, 785
NspI RCATGY 1 cut(s) 1023
PciSI GCTCTTC 1 cut(s) 271
PcsI WCGNNNNNNNCGW 1 cut(s) 733
PctI GAATGC 1 cut(s) 785
PdmI GAANNNNTTC 1 cut(s) 498
PfeI GAWTC 8 cut(s) 93, 197, 340, 383, 630, 716, 1052, 1133
PkrI GCNGC 2 cut(s) 286, 1096
PleI GAGTC 1 cut(s) 229
PpsI GAGTC 1 cut(s) 229
Ppu21I YACGTR 1 cut(s) 737
PshAI GACNNNNGTC 1 cut(s) 1265
PshBI ATTAAT 1 cut(s) 618
Psp124BI GAGCTC 1 cut(s) 1089
Psp6I CCWGG 2 cut(s) 106, 256
PspFI CCCAGC 1 cut(s) 1283
PspGI CCWGG 2 cut(s) 106, 256
PspN4I GGNNCC 6 cut(s) 698, 757, 1143, 1205, 1241, 1296
PspPI GGNCC 2 cut(s) 254, 1047
PsuI RGATCY 1 cut(s) 755
PvuII CAGCTG 3 cut(s) 287, 392, 1097
RsaI GTAC 3 cut(s) 137, 509, 1205
RsaNI GTAC 3 cut(s) 136, 508, 1204
RseI CAYNNNNRTG 1 cut(s) 987
SacI GAGCTC 1 cut(s) 1089
SapI GCTCTTC 1 cut(s) 271
SaqAI TTAA 4 cut(s) 618, 707, 795, 872
SatI GCNGC 2 cut(s) 285, 1095
Sau3AI GATC 5 cut(s) 76, 755, 826, 919, 1334
Sau96I GGNCC 2 cut(s) 254, 1047
ScaI AGTACT 1 cut(s) 137
SchI GAGTC 1 cut(s) 230
ScrFI CCNGG 3 cut(s) 108, 203, 258
SduI GDGCHC 2 cut(s) 1089, 1290
SfaNI GCATC 4 cut(s) 454, 775, 875, 1162
SmiMI CAYNNNNRTG 1 cut(s) 987
Sse9I AATT 8 cut(s) 101, 358, 367, 484, 612, 619, 708, 880
SsiI CCGC 1 cut(s) 1312
SspMI CTAG 5 cut(s) 225, 233, 479, 996, 1316
SstI GAGCTC 1 cut(s) 1089
StyD4I CCNGG 3 cut(s) 106, 201, 256
StyI CCWWGG 5 cut(s) 700, 751, 899, 1010, 1208
TaaI ACNGT 5 cut(s) 154, 507, 836, 959, 1273
TaiI ACGT 3 cut(s) 683, 739, 969
TaqI TCGA 1 cut(s) 825
TasI AATT 8 cut(s) 101, 358, 367, 484, 612, 619, 708, 880
TatI WGTACW 2 cut(s) 135, 507
TfiI GAWTC 8 cut(s) 93, 197, 340, 383, 630, 716, 1052, 1133
Tru1I TTAA 4 cut(s) 618, 707, 795, 872
Tru9I TTAA 4 cut(s) 618, 707, 795, 872
TscAI CASTG 7 cut(s) 780, 868, 934, 1030, 1126, 1135, 1276
TseFI GTSAC 8 cut(s) 8, 148, 649, 746, 890, 1147, 1267, 1273
TseI GCWGC 2 cut(s) 284, 1094
Tsp45I GTSAC 8 cut(s) 8, 148, 649, 746, 890, 1147, 1267, 1273
TspDTI ATGAA 4 cut(s) 296, 396, 622, 1312
TspGWI ACGGA 1 cut(s) 824
TspRI CASTG 7 cut(s) 780, 868, 934, 1030, 1126, 1135, 1276
VspI ATTAAT 1 cut(s) 618
XapI RAATTY 1 cut(s) 367
XbaI TCTAGA 1 cut(s) 224
XceI RCATGY 1 cut(s) 1023
XcmI CCANNNNNNNNNTGG 1 cut(s) 671
XmiI GTMKAC 2 cut(s) 434, 1248
XmnI GAANNNNTTC 1 cut(s) 498
XspI CTAG 5 cut(s) 225, 233, 479, 996, 1316
ZrmI AGTACT 1 cut(s) 137
Zsp2I ATGCAT 3 cut(s) 469, 475, 785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.