pycom01g13780

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
14158879 .. 14163091
4213 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g13780.8

Sequence Viewer

Length: 1368 bp
ATGGGTGGTCACTCTCCATTTTCATTTCTCTGCATTTTGCTTCTTTTCTTGGGAGGTTGTTTTGCTTCTAATCAAGATCAAGTGAGGGATAGAATCACACAATTGCCAGGACAGCCAAATGTGGGGTTTGCTCAGTACTCCGGTTATGTGACTGTCAATGGGAAAGCCGGTAGGGCATTGTTTTACTGGTTGACTGAATCACCGGAAAATCGCCAACCCGAGTCTAGACCTCTAGTGTTGTGGCTCAATGGTGGCCCTGGTTGCTCTTCTGTTGCTTATGGAGCAGCTGAAGAGATTGGACCTTTTCATATTAGACCTGATGGAAAGACCCTTTACTTGAATCCCTATGCTTGGAACAATTTGGCAAATTTGCTATTCCTTGAATCTCCAGCCGGTGTCGGTTTTTCATATACGAATACAAGCTCAGATTTGTATACAGCCGGAGACCAGAGAACAGCCGAAGATGCATATGCATTTCTAGTCAATTGGTTTGAAAGGTTTCCACAGTACAAGCACAGAGATTTCTACATTGCTGGAGAAAGTTATGCAGGTCATTATGTTCCTCAGTTGTCTCAAATCATTTATGAGAGAAATAAGGGAAAGCAGAACCCAATTATTAATTTCAAGGGATTCATGGTGGGAAATGCTGTGACTGATGATTACCATGATTTTATTGGCACGTTTGAATTCTGGTGGAGCCATGGTTTAATTTCCGATTCTACCTATCGGGTGCTACGTGTAACCTGTGACCTTGGATCCTCTCAGCATCCATCAGTGGAATGCATGAGGGCGCTTAAAATAGCAGAAACGGAGCAGGGAAATATCGATCCATACAGTATTTATACTCGTCCTTGCAATAGCACTGCATCCTTAAAGCGCAATTTGAGGGGTCACTATCCATGGATGTCCAGAGCATATGATCCCTGCACCGAGAGGTATTCTGAAGTGTATTTCAACCGTCCAGACGTTCAAAAGGCACTCCATGCCAATGTAACTAGAGTTTCTTACCCATGGAAAACATGCAGTGATATTGTTGGAAACTACTGGGCCGATTCTCCATTGTCCATTCTTCCTATTTACAGGGAGCTCATAGCAGCTGGTCTTAGGATATGGGTATTCAGTGGAGACACTGATTCGGTGGTTCCTGTGACAGCAACTCGTTACTCCATAGATGCTCTGAAGCTACCAACCATTACCAACTGGTACCCATGGAACAACAACGGAAAGGTTGGTGGCTGGAGCCAAGTATACAAGGGGCTGACATTTGTCACCGTGACCGGAGCTGGACACGAGGTTCCCCTCCACCGACCCCGCCTAGCTGTCATCCTTTTCCGATCATTTTTGGCGAGCAAGGCAATGCCAAGTTAG

Protein Analysis

456

Amino Acids

51.27

Weight (kDa)

8.02

Isoelectric Point (pI)

41.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 539
Acc65I GGTACC 1 cut(s) 1203
AccB1I GGYRCC 1 cut(s) 1203
AccI GTMKAC 2 cut(s) 434, 1248
AciI CCGC 1 cut(s) 1312
AclWI GGATC 4 cut(s) 750, 763, 821, 914
AcsI RAATTY 2 cut(s) 367, 686
AcuI CTGAAG 3 cut(s) 309, 963, 1199
AfaI GTAC 3 cut(s) 137, 509, 1205
AfiI CCNNNNNNNGG 2 cut(s) 122, 351
AflIII ACRYGT 1 cut(s) 736
AgsI TTSAA 7 cut(s) 340, 383, 494, 625, 686, 955, 971
AjnI CCWGG 2 cut(s) 106, 256
AloI GAACNNNNNNTCC 2 cut(s) 1278, 1310
AluBI AGCT 7 cut(s) 287, 423, 1087, 1097, 1183, 1283, 1319
AluI AGCT 7 cut(s) 287, 423, 1087, 1097, 1183, 1283, 1319
Alw21I GWGCWC 1 cut(s) 1089
Alw26I GTCTC 3 cut(s) 438, 576, 1119
AlwI GGATC 4 cut(s) 750, 763, 821, 914
Ama87I CYCGRG 1 cut(s) 218
AoxI GGCC 2 cut(s) 253, 1047
ApeKI GCWGC 2 cut(s) 284, 1094
ApoI RAATTY 2 cut(s) 367, 686
AseI ATTAAT 1 cut(s) 618
Asp700I GAANNNNTTC 1 cut(s) 498
Asp718I GGTACC 1 cut(s) 1203
AspLEI GCGC 2 cut(s) 793, 879
AspS9I GGNCC 3 cut(s) 254, 299, 1047
AsuHPI GGTGA 2 cut(s) 192, 1261
AvaI CYCGRG 1 cut(s) 218
AvaII GGWCC 1 cut(s) 299
BamHI GGATCC 1 cut(s) 755
BanI GGYRCC 1 cut(s) 1203
BanII GRGCYC 1 cut(s) 1089
BauI CACGAG 1 cut(s) 1289
Bbv12I GWGCWC 1 cut(s) 1089
BbvI GCAGC 2 cut(s) 296, 1106
BccI CCATC 2 cut(s) 314, 778
BciT130I CCWGG 2 cut(s) 108, 258
BcoDI GTCTC 3 cut(s) 438, 576, 1119
BfaI CTAG 5 cut(s) 225, 233, 479, 996, 1316
BfoI RGCGCY 1 cut(s) 794
BfuAI ACCTGC 1 cut(s) 539
BglI GCCNNNNNGGC 1 cut(s) 173
BisI GCNGC 2 cut(s) 285, 1095
BlsI GCNGC 2 cut(s) 286, 1096
BmcAI AGTACT 1 cut(s) 137
Bme1390I CCNGG 2 cut(s) 108, 258
Bme18I GGWCC 1 cut(s) 299
BmeT110I CYCGRG 1 cut(s) 218
BmgT120I GGNCC 3 cut(s) 254, 299, 1047
BmiI GGNNCC 6 cut(s) 698, 757, 1143, 1205, 1241, 1296
BmrFI CCNGG 2 cut(s) 108, 258
BmrI ACTGGG 1 cut(s) 1054
BmsI GCATC 4 cut(s) 454, 775, 875, 1162
BmuI ACTGGG 1 cut(s) 1054
BoxI GACNNNNGTC 1 cut(s) 1265
BpmI CTGGAG 3 cut(s) 372, 555, 1258
Bsa29I ATCGAT 1 cut(s) 825
BsaAI YACGTR 1 cut(s) 737
BsaI GGTCTC 1 cut(s) 438
BsaJI CCNNGG 6 cut(s) 256, 700, 751, 899, 1010, 1208
BsaWI WCCGGW 3 cut(s) 140, 202, 1277
BsaXI ACNNNNNCTCC 2 cut(s) 688, 718
Bsc4I CCNNNNNNNGG 2 cut(s) 122, 351
Bse118I RCCGGY 2 cut(s) 167, 392
Bse1I ACTGG 3 cut(s) 191, 1049, 1205
Bse3DI GCAATG 2 cut(s) 528, 1362
BseBI CCWGG 2 cut(s) 108, 258
BseCI ATCGAT 1 cut(s) 825
BseDI CCNNGG 6 cut(s) 256, 700, 751, 899, 1010, 1208
BseGI GGATG 4 cut(s) 766, 866, 909, 1323
BseLI CCNNNNNNNGG 2 cut(s) 122, 351
BseMI GCAATG 2 cut(s) 528, 1362
BseMII CTCAG 4 cut(s) 146, 438, 578, 776
BseNI ACTGG 3 cut(s) 191, 1049, 1205
BseXI GCAGC 2 cut(s) 296, 1106
BsgI GTGCAG 1 cut(s) 910
BshFI GGCC 2 cut(s) 255, 1049
BshNI GGYRCC 1 cut(s) 1203
BshVI ATCGAT 1 cut(s) 825
BsiHKAI GWGCWC 1 cut(s) 1089
BsiHKCI CYCGRG 1 cut(s) 218
BsiSI CCGG 6 cut(s) 141, 168, 203, 393, 441, 1278
BslI CCNNNNNNNGG 2 cut(s) 122, 351
BsmAI GTCTC 3 cut(s) 438, 576, 1119
BsmI GAATGC 1 cut(s) 785
BsnI GGCC 2 cut(s) 255, 1049
Bso31I GGTCTC 1 cut(s) 438
BsoBI CYCGRG 1 cut(s) 218
Bsp1286I GDGCHC 1 cut(s) 1089
Bsp143I GATC 5 cut(s) 76, 755, 826, 919, 1334
Bsp19I CCATGG 4 cut(s) 700, 899, 1010, 1208
BspACI CCGC 1 cut(s) 1312
BspANI GGCC 2 cut(s) 255, 1049
BspCNI CTCAG 4 cut(s) 145, 437, 577, 775
BspDI ATCGAT 1 cut(s) 825
BspLI GGNNCC 6 cut(s) 698, 757, 1143, 1205, 1241, 1296
BspMI ACCTGC 1 cut(s) 539
BspPI GGATC 4 cut(s) 750, 763, 821, 914
BspQI GCTCTTC 1 cut(s) 271
BspT107I GGYRCC 1 cut(s) 1203
BspTNI GGTCTC 1 cut(s) 438
BsrDI GCAATG 2 cut(s) 528, 1362
BsrFI RCCGGY 2 cut(s) 167, 392
BsrI ACTGG 3 cut(s) 191, 1049, 1205
BssAI RCCGGY 2 cut(s) 167, 392
BssECI CCNNGG 6 cut(s) 256, 700, 751, 899, 1010, 1208
BssMI GATC 5 cut(s) 76, 755, 826, 919, 1334
BssNAI GTATAC 2 cut(s) 435, 1249
BssSI CACGAG 1 cut(s) 1289
BssT1I CCWWGG 5 cut(s) 700, 751, 899, 1010, 1208
Bst1107I GTATAC 2 cut(s) 435, 1249
Bst2BI CACGAG 1 cut(s) 1289
Bst2UI CCWGG 2 cut(s) 108, 258
Bst4CI ACNGT 5 cut(s) 154, 507, 836, 959, 1273
Bst6I CTCTTC 2 cut(s) 271, 285
BstAPI GCANNNNNTGC 1 cut(s) 983
BstBAI YACGTR 1 cut(s) 737
BstC8I GCNNGC 1 cut(s) 1348
BstDEI CTNAG 5 cut(s) 132, 424, 564, 762, 1103
BstDSI CCRYGG 4 cut(s) 700, 899, 1010, 1208
BstF5I GGATG 4 cut(s) 766, 866, 909, 1323
BstH2I RGCGCY 1 cut(s) 794
BstHHI GCGC 2 cut(s) 793, 879
BstKTI GATC 5 cut(s) 79, 758, 829, 922, 1337
BstMAI GTCTC 3 cut(s) 438, 576, 1119
BstMBI GATC 5 cut(s) 76, 755, 826, 919, 1334
BstMWI GCNNNNNNNGC 7 cut(s) 112, 173, 261, 281, 464, 983, 1352
BstNI CCWGG 2 cut(s) 108, 258
BstNSI RCATGY 1 cut(s) 1023
BstPAI GACNNNNGTC 1 cut(s) 1265
BstSCI CCNGG 2 cut(s) 106, 256
BstV1I GCAGC 2 cut(s) 296, 1106
BstX2I RGATCY 1 cut(s) 755
BstYI RGATCY 1 cut(s) 755
BstZ17I GTATAC 2 cut(s) 435, 1249
Bsu15I ATCGAT 1 cut(s) 825
BsuRI GGCC 2 cut(s) 255, 1049
BsuTUI ATCGAT 1 cut(s) 825
BtgI CCRYGG 4 cut(s) 700, 899, 1010, 1208
BtsCI GGATG 4 cut(s) 766, 866, 909, 1323
BtsI GCAGTG 2 cut(s) 861, 1030
BtsIMutI CAGTG 5 cut(s) 780, 861, 1030, 1126, 1128
BveI ACCTGC 1 cut(s) 539
Cac8I GCNNGC 1 cut(s) 1348
CfoI GCGC 2 cut(s) 793, 879
Cfr10I RCCGGY 2 cut(s) 167, 392
Cfr13I GGNCC 3 cut(s) 254, 299, 1047
ClaI ATCGAT 1 cut(s) 825
Csp6I GTAC 3 cut(s) 136, 508, 1204
CviAII CATG 9 cut(s) 634, 665, 701, 784, 900, 983, 1011, 1020, 1209
CviQI GTAC 3 cut(s) 136, 508, 1204
DdeI CTNAG 5 cut(s) 132, 424, 564, 762, 1103
DpnI GATC 5 cut(s) 78, 757, 828, 921, 1336
DpnII GATC 5 cut(s) 76, 755, 826, 919, 1334
Eam1104I CTCTTC 2 cut(s) 271, 285
EarI CTCTTC 2 cut(s) 271, 285
Ecl136II GAGCTC 1 cut(s) 1087
Eco130I CCWWGG 5 cut(s) 700, 751, 899, 1010, 1208
Eco24I GRGCYC 1 cut(s) 1089
Eco31I GGTCTC 1 cut(s) 438
Eco47I GGWCC 1 cut(s) 299
Eco53kI GAGCTC 1 cut(s) 1087
Eco57I CTGAAG 3 cut(s) 309, 963, 1199
Eco88I CYCGRG 1 cut(s) 218
EcoICRI GAGCTC 1 cut(s) 1087
EcoRI GAATTC 1 cut(s) 686
EcoRII CCWGG 2 cut(s) 106, 256
EcoT14I CCWWGG 5 cut(s) 700, 751, 899, 1010, 1208
EcoT22I ATGCAT 3 cut(s) 469, 475, 785
EcoT38I GRGCYC 1 cut(s) 1089
ErhI CCWWGG 5 cut(s) 700, 751, 899, 1010, 1208
FaeI CATG 9 cut(s) 637, 668, 704, 787, 903, 986, 1014, 1023, 1212
FatI CATG 9 cut(s) 633, 664, 700, 783, 899, 982, 1010, 1019, 1208
FauI CCCGC 1 cut(s) 1319
FauNDI CATATG 2 cut(s) 469, 916
FblI GTMKAC 2 cut(s) 434, 1248
Fnu4HI GCNGC 2 cut(s) 285, 1095
FokI GGATG 4 cut(s) 753, 853, 916, 1310
FriOI GRGCYC 1 cut(s) 1089
Fsp4HI GCNGC 2 cut(s) 285, 1095
FspBI CTAG 5 cut(s) 225, 233, 479, 996, 1316
GlaI GCGC 2 cut(s) 792, 878
GluI GCNGC 2 cut(s) 285, 1095
GsuI CTGGAG 3 cut(s) 372, 555, 1258
HaeII RGCGCY 1 cut(s) 794
HaeIII GGCC 2 cut(s) 255, 1049
HapII CCGG 6 cut(s) 141, 168, 203, 393, 441, 1278
HhaI GCGC 2 cut(s) 793, 879
Hin1II CATG 9 cut(s) 637, 668, 704, 787, 903, 986, 1014, 1023, 1212
Hin6I GCGC 2 cut(s) 791, 877
HinP1I GCGC 2 cut(s) 791, 877
HincII GTYRAC 1 cut(s) 192
HindII GTYRAC 1 cut(s) 192
HinfI GANTC 9 cut(s) 93, 197, 221, 340, 383, 630, 716, 1052, 1133
HpaII CCGG 6 cut(s) 141, 168, 203, 393, 441, 1278
HphI GGTGA 2 cut(s) 192, 1261
Hpy166II GTNNAC 3 cut(s) 192, 435, 1249
Hpy188I TCNGA 5 cut(s) 427, 715, 943, 1179, 1334
Hpy188III TCNNGA 4 cut(s) 74, 225, 909, 962
Hpy8I GTNNAC 3 cut(s) 192, 435, 1249
HpyCH4III ACNGT 5 cut(s) 154, 507, 836, 959, 1273
HpyCH4IV ACGT 3 cut(s) 680, 736, 966
HpyCH4V TGCA 9 cut(s) 33, 467, 473, 548, 783, 855, 866, 927, 1023
HpyF10VI GCNNNNNNNGC 7 cut(s) 112, 173, 261, 281, 464, 983, 1352
HpyF3I CTNAG 5 cut(s) 132, 424, 564, 762, 1103
HpySE526I ACGT 3 cut(s) 680, 736, 966
Hsp92II CATG 9 cut(s) 637, 668, 704, 787, 903, 986, 1014, 1023, 1212
HspAI GCGC 2 cut(s) 791, 877
KpnI GGTACC 1 cut(s) 1207
Kzo9I GATC 5 cut(s) 76, 755, 826, 919, 1334
LguI GCTCTTC 1 cut(s) 271
LmnI GCTCC 6 cut(s) 281, 696, 811, 1084, 1239, 1280
Lsp1109I GCAGC 2 cut(s) 296, 1106
LweI GCATC 4 cut(s) 454, 775, 875, 1162
MaeI CTAG 5 cut(s) 225, 233, 479, 996, 1316
MaeII ACGT 3 cut(s) 680, 736, 966
MalI GATC 5 cut(s) 78, 757, 828, 921, 1336
MboI GATC 5 cut(s) 76, 755, 826, 919, 1334
MboII GAAGA 4 cut(s) 258, 302, 473, 1061
MfeI CAATTG 2 cut(s) 101, 484
MflI RGATCY 1 cut(s) 755
MhlI GDGCHC 1 cut(s) 1089
MluCI AATT 9 cut(s) 101, 358, 367, 484, 612, 619, 686, 708, 880
MlyI GAGTC 1 cut(s) 230
MmeI TCCRAC 1 cut(s) 1015
Mph1103I ATGCAT 3 cut(s) 469, 475, 785
MroXI GAANNNNTTC 1 cut(s) 498
MseI TTAA 4 cut(s) 618, 707, 795, 872
MslI CAYNNNNRTG 1 cut(s) 987
MspA1I CMGCKG 2 cut(s) 287, 1097
MspI CCGG 6 cut(s) 141, 168, 203, 393, 441, 1278
MspR9I CCNGG 2 cut(s) 108, 258
MunI CAATTG 2 cut(s) 101, 484
Mva1269I GAATGC 1 cut(s) 785
MvaI CCWGG 2 cut(s) 108, 258
MwoI GCNNNNNNNGC 7 cut(s) 112, 173, 261, 281, 464, 983, 1352
NcoI CCATGG 4 cut(s) 700, 899, 1010, 1208
NdeI CATATG 2 cut(s) 469, 916
NdeII GATC 5 cut(s) 76, 755, 826, 919, 1334
NlaIII CATG 9 cut(s) 637, 668, 704, 787, 903, 986, 1014, 1023, 1212
NlaIV GGNNCC 6 cut(s) 698, 757, 1143, 1205, 1241, 1296
NmuCI GTSAC 8 cut(s) 8, 148, 649, 746, 890, 1147, 1267, 1273
NsiI ATGCAT 3 cut(s) 469, 475, 785
NspI RCATGY 1 cut(s) 1023
PciSI GCTCTTC 1 cut(s) 271
PcsI WCGNNNNNNNCGW 1 cut(s) 733
PctI GAATGC 1 cut(s) 785
PdmI GAANNNNTTC 1 cut(s) 498
PfeI GAWTC 8 cut(s) 93, 197, 340, 383, 630, 716, 1052, 1133
PkrI GCNGC 2 cut(s) 286, 1096
PleI GAGTC 1 cut(s) 229
PpsI GAGTC 1 cut(s) 229
Ppu21I YACGTR 1 cut(s) 737
PshAI GACNNNNGTC 1 cut(s) 1265
PshBI ATTAAT 1 cut(s) 618
Psp124BI GAGCTC 1 cut(s) 1089
Psp6I CCWGG 2 cut(s) 106, 256
PspGI CCWGG 2 cut(s) 106, 256
PspN4I GGNNCC 6 cut(s) 698, 757, 1143, 1205, 1241, 1296
PspPI GGNCC 3 cut(s) 254, 299, 1047
PsuI RGATCY 1 cut(s) 755
PvuII CAGCTG 2 cut(s) 287, 1097
RsaI GTAC 3 cut(s) 137, 509, 1205
RsaNI GTAC 3 cut(s) 136, 508, 1204
RseI CAYNNNNRTG 1 cut(s) 987
SacI GAGCTC 1 cut(s) 1089
SapI GCTCTTC 1 cut(s) 271
SaqAI TTAA 4 cut(s) 618, 707, 795, 872
SatI GCNGC 2 cut(s) 285, 1095
Sau3AI GATC 5 cut(s) 76, 755, 826, 919, 1334
Sau96I GGNCC 3 cut(s) 254, 299, 1047
ScaI AGTACT 1 cut(s) 137
SchI GAGTC 1 cut(s) 230
ScrFI CCNGG 2 cut(s) 108, 258
SduI GDGCHC 1 cut(s) 1089
SfaNI GCATC 4 cut(s) 454, 775, 875, 1162
SinI GGWCC 1 cut(s) 299
SmiMI CAYNNNNRTG 1 cut(s) 987
Sse9I AATT 9 cut(s) 101, 358, 367, 484, 612, 619, 686, 708, 880
SsiI CCGC 1 cut(s) 1312
SspMI CTAG 5 cut(s) 225, 233, 479, 996, 1316
SstI GAGCTC 1 cut(s) 1089
StyD4I CCNGG 2 cut(s) 106, 256
StyI CCWWGG 5 cut(s) 700, 751, 899, 1010, 1208
TaaI ACNGT 5 cut(s) 154, 507, 836, 959, 1273
TaiI ACGT 3 cut(s) 683, 739, 969
TaqI TCGA 1 cut(s) 825
TasI AATT 9 cut(s) 101, 358, 367, 484, 612, 619, 686, 708, 880
TatI WGTACW 2 cut(s) 135, 507
TfiI GAWTC 8 cut(s) 93, 197, 340, 383, 630, 716, 1052, 1133
Tru1I TTAA 4 cut(s) 618, 707, 795, 872
Tru9I TTAA 4 cut(s) 618, 707, 795, 872
TscAI CASTG 5 cut(s) 780, 868, 1030, 1126, 1135
TseFI GTSAC 8 cut(s) 8, 148, 649, 746, 890, 1147, 1267, 1273
TseI GCWGC 2 cut(s) 284, 1094
Tsp45I GTSAC 8 cut(s) 8, 148, 649, 746, 890, 1147, 1267, 1273
TspDTI ATGAA 4 cut(s) 12, 296, 396, 622
TspGWI ACGGA 2 cut(s) 824, 1236
TspRI CASTG 5 cut(s) 780, 868, 1030, 1126, 1135
VpaK11BI GGWCC 1 cut(s) 299
VspI ATTAAT 1 cut(s) 618
XapI RAATTY 2 cut(s) 367, 686
XbaI TCTAGA 1 cut(s) 224
XceI RCATGY 1 cut(s) 1023
XcmI CCANNNNNNNNNTGG 1 cut(s) 671
XmiI GTMKAC 2 cut(s) 434, 1248
XmnI GAANNNNTTC 1 cut(s) 498
XspI CTAG 5 cut(s) 225, 233, 479, 996, 1316
ZrmI AGTACT 1 cut(s) 137
Zsp2I ATGCAT 3 cut(s) 469, 475, 785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.