Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0006951

Physical Location & Seq

Genomic Coordinates Reverse (-)

22726643 .. 22730520

Gene Structure 3878 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1113400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1407 bp

ATGTTGGATCTTAACGTTAATTTCATCACCATAACTGAGACAAAATCAATGGAGGTTGAAGATTCCGGGACCTCCAACTCCTCCGTCGTCAATGCCGAAGAAGCTCTGACTCCGAGCAATGCTGGAGACGAAGACTCCACCAACAACACCACTTCCTCTTTCATGTTTGATATCCTGAAGAGAGAGAAAGGTGGTCTCTGCAATTATGGGGCGGGAGACCAAACGCAATCTATGCAGTTCGTGACGAGGTCGCTTTTTCCGGTGACCGGAGACGGCGGAGGAGGCAAGGAGGGTGATGGGTACGGGTTGGGATTGTCGTCATCGTCCTCGTCAGCGGCAAGGCCTCAGGGGCTGAATTTGTCGTTTGCCGAGTCGGGAGAGCAGACTCAGGCCGAGCTGAGAGTTGTACAGCAGAAAAAACAGCCGCCCAGGAAGAGCCGCCGCGGGCCAAGATCCCGGAGCTCTGAGTACCGCGGCGTCACGTTTTACCGCAGGACAGGGCGGTGGGAGTCGCATATATGGGATTGTGGGAAGCAGGTTTATTTAGGTGGATTTGACACTGCTCATTCTGCAGCTAGAGCATATGATCGAGCTGCAATCAAGTTTCGCGGAGTTGATGCCGATATCAATTTTAACCTAGGAGATTATGAGGAAGATATGAAACTGTTGGGGGATCTGAATAAAGAAGAATTTGTGCACGCGCTTCGTCGCCAAAGCACAGGAGCCTCACGTGGGAACTCAAAATACAGAGGCGTAGCAGCAGCTGCTCTGCCTAAATGTGGTGCCAGATGGGAAGATCTAATGGGACAAGTTCCTGGGAATAATGTCTTTGAAAAGAAGGCCGTCAAATGCAGGACCGGAAGAGAAGCAGTTACAAACTGTGACCCCAATGTCTACGAAGGGGAGATAGTTTTACATGCTAGCATTGAAGGCAGTAGTCACAACCTTGATCTGAACCTAGGGATTTCTCAACCTTGTTCTACTGGTAAAAAAGGGAAGGGAAAATTTGGGGATTTTCAATTTCCTAACGAGAAGCCAATGGTTAATGGGTTTTGTTCTGCGGCTGTGGGAGTGGGACAACCCCCTCATGTTTTAACAATGGTAGCCAAGCATCCTGCCCTATATCCAGGTTTCGTACAAAAACATGAGGAAATGGCTTCAGGTCATAACAGATTGCAACCAATTTCTTCGCCGAGATACACAAACTGGGCATGGCAAGTTCATGGAAACAGCAACAATGTCAGCCCAATGCAAGTGTATTCCATTGCAGCATCATCAGGATTCCCATCTTCCACAGCTACTACACCTCCATCAGCTACTTACCTTCCTCCGAACCTCCAAGACGGTAGTGCTTCCGCCTACAACGTCCGCCGCCTTCCCTTCCCAGCCGCATCCAGCATGTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0010073 GO:0010093 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035670 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048449 GO:0048467 GO:0048481 GO:0048507 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

469

Amino Acids

50.66

Weight (kDa)

8.34

Isoelectric Point (pI)

45.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	156 - 204	1.4e-09	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006951)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g20380 FvH4_7g20380 FvH4_7g20380 FvH4_7g20380 FvH4_7g20380 FvH4_7g20380 FvH4_7g20380
malus_domestica	MD01G1113400.v1.1 MD07G1180900.v1.1
prunus_persica	Prupe.2G220100_v2.0.a1
pyrus_communis	pycom01g14170
rosa_chinensis	RchiOBHm_Chr1g0364341
rosa_laevigata	RLG00000027494
rosa_multiflora	Rmu_sc0007470.1_g000004
rosa_roxburghii	Rroxscaffold_4G00292420
rosa_rugosa	Rorug01G0315400 Rorug01G0315400 Rorug01G0315400 Rorug01G0315400 Rorug01G0315500 Rorug01G0315500
rosa_samantha	Rh1AG323300 Rh1BG285800 Rh1CG302500 Rh1DG317300
rosa_wichuraiana	Rw1G028640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	890
Acc36I	ACCTGC	1 cut(s)	526
AccB1I	GGYRCC	1 cut(s)	782
AccI	GTMKAC	1 cut(s)	894
AccII	CGCG	4 cut(s)	444, 474, 609, 701
AclI	AACGTT	1 cut(s)	15
AclWI	GGATC	3 cut(s)	15, 447, 681
AcsI	RAATTY	3 cut(s)	355, 689, 1004
AcuI	CTGAAG	2 cut(s)	197, 1143
AcvI	CACGTG	1 cut(s)	731
AcyI	GRCGYC	1 cut(s)	477
AfaI	GTAC	5 cut(s)	302, 408, 470, 1137, 1403
AfiI	CCNNNNNNNGG	3 cut(s)	266, 732, 779
AgsI	TTSAA	4 cut(s)	59, 833, 929, 1019
AjnI	CCWGG	3 cut(s)	428, 814, 1126
AluBI	AGCT	8 cut(s)	104, 397, 462, 575, 593, 764, 1298, 1316
AluI	AGCT	8 cut(s)	104, 397, 462, 575, 593, 764, 1298, 1316
Alw21I	GWGCWC	2 cut(s)	464, 699
Alw26I	GTCTC	5 cut(s)	32, 120, 200, 210, 264
Alw44I	GTGCAC	1 cut(s)	695
AlwI	GGATC	3 cut(s)	15, 447, 681
AlwNI	CAGNNNCTG	2 cut(s)	352, 764
AoxI	GGCC	4 cut(s)	341, 390, 446, 840
ApaLI	GTGCAC	1 cut(s)	695
ApeKI	GCWGC	6 cut(s)	572, 593, 758, 761, 764, 1268
ApoI	RAATTY	3 cut(s)	355, 689, 1004
AspA2I	CCTAGG	2 cut(s)	637, 958
AspLEI	GCGC	1 cut(s)	703
AspS9I	GGNCC	3 cut(s)	69, 446, 855
AsuC2I	CCSGG	2 cut(s)	67, 457
AsuHPI	GGTGA	3 cut(s)	19, 274, 305
AsuNHI	GCTAGC	1 cut(s)	920
AvaII	GGWCC	2 cut(s)	69, 855
AvrII	CCTAGG	2 cut(s)	637, 958
AxyI	CCTNAGG	1 cut(s)	345
BaeGI	GKGCMC	1 cut(s)	699
BanI	GGYRCC	1 cut(s)	782
BanII	GRGCYC	1 cut(s)	464
BbrPI	CACGTG	1 cut(s)	731
BbsI	GAAGAC	1 cut(s)	138
Bbv12I	GWGCWC	2 cut(s)	464, 699
BbvI	GCAGC	6 cut(s)	580, 584, 751, 770, 773, 1280
BccI	CCATC	4 cut(s)	290, 783, 1294, 1318
BceAI	ACGGC	2 cut(s)	289, 827
BcgI	CGANNNNNNTGC	2 cut(s)	686, 720
BciT130I	CCWGG	3 cut(s)	430, 816, 1128
BcnI	CCSGG	2 cut(s)	67, 457
BcoDI	GTCTC	5 cut(s)	32, 120, 200, 210, 264
BfaI	CTAG	5 cut(s)	576, 638, 921, 959, 1405
BfmI	CTRYAG	1 cut(s)	570
BfuAI	ACCTGC	1 cut(s)	526
BglI	GCCNNNNNGGC	1 cut(s)	349
BglII	AGATCT	1 cut(s)	796
BlnI	CCTAGG	2 cut(s)	637, 958
Bme1390I	CCNGG	5 cut(s)	67, 430, 457, 816, 1128
Bme18I	GGWCC	2 cut(s)	69, 855
BmgT120I	GGNCC	3 cut(s)	69, 446, 855
BmiI	GGNNCC	3 cut(s)	70, 724, 784
BmrFI	CCNGG	5 cut(s)	67, 430, 457, 816, 1128
BmrI	ACTGGG	1 cut(s)	1216
BmsI	GCATC	4 cut(s)	607, 1120, 1280, 1400
BmtI	GCTAGC	1 cut(s)	924
BmuI	ACTGGG	1 cut(s)	1216
BpiI	GAAGAC	1 cut(s)	138
BpmI	CTGGAG	1 cut(s)	144
BpuMI	CCSGG	2 cut(s)	67, 457
BsaAI	YACGTR	1 cut(s)	731
BsaBI	GATNNNNATC	1 cut(s)	1285
BsaHI	GRCGYC	1 cut(s)	477
BsaI	GGTCTC	2 cut(s)	200, 210
BsaJI	CCNNGG	6 cut(s)	428, 442, 472, 637, 815, 958
BsaWI	WCCGGW	3 cut(s)	259, 266, 857
BsaXI	ACNNNNNCTCC	4 cut(s)	119, 149, 1291, 1321
Bsc4I	CCNNNNNNNGG	3 cut(s)	266, 732, 779
Bse1I	ACTGG	2 cut(s)	988, 1211
Bse21I	CCTNAGG	1 cut(s)	345
Bse3DI	GCAATG	2 cut(s)	124, 1263
Bse8I	GATNNNNATC	1 cut(s)	1285
BseBI	CCWGG	3 cut(s)	430, 816, 1128
BseDI	CCNNGG	6 cut(s)	428, 442, 472, 637, 815, 958
BseGI	GGATG	2 cut(s)	1111, 1391
BseJI	GATNNNNATC	1 cut(s)	1285
BseLI	CCNNNNNNNGG	3 cut(s)	266, 732, 779
BseMI	GCAATG	2 cut(s)	124, 1263
BseMII	CTCAG	5 cut(s)	27, 359, 389, 401, 456
BseNI	ACTGG	2 cut(s)	988, 1211
BseRI	GAGGAG	2 cut(s)	70, 294
BseSI	GKGCMC	1 cut(s)	699
BseXI	GCAGC	6 cut(s)	580, 584, 751, 770, 773, 1280
BseYI	CCCAGC	1 cut(s)	1384
Bsh1236I	CGCG	4 cut(s)	444, 474, 609, 701
BshFI	GGCC	4 cut(s)	343, 392, 448, 842
BshNI	GGYRCC	1 cut(s)	782
BsiHKAI	GWGCWC	2 cut(s)	464, 699
BsiSI	CCGG	5 cut(s)	66, 260, 267, 457, 858
BslFI	GGGAC	3 cut(s)	82, 819, 1089
BslI	CCNNNNNNNGG	3 cut(s)	266, 732, 779
BsmAI	GTCTC	5 cut(s)	32, 120, 200, 210, 264
BsmBI	CGTCTC	2 cut(s)	120, 264
BsmFI	GGGAC	3 cut(s)	82, 819, 1089
BsnI	GGCC	4 cut(s)	343, 392, 448, 842
Bso31I	GGTCTC	2 cut(s)	200, 210
Bsp1286I	GDGCHC	2 cut(s)	464, 699
Bsp1407I	TGTACA	1 cut(s)	406
Bsp143I	GATC	6 cut(s)	7, 452, 586, 673, 796, 949
BspANI	GGCC	4 cut(s)	343, 392, 448, 842
BspCNI	CTCAG	5 cut(s)	28, 358, 390, 400, 457
BspFNI	CGCG	4 cut(s)	444, 474, 609, 701
BspLI	GGNNCC	3 cut(s)	70, 724, 784
BspMAI	CTGCAG	1 cut(s)	574
BspMI	ACCTGC	1 cut(s)	526
BspOI	GCTAGC	1 cut(s)	924
BspPI	GGATC	3 cut(s)	15, 447, 681
BspQI	GCTCTTC	1 cut(s)	428
BspT107I	GGYRCC	1 cut(s)	782
BspTNI	GGTCTC	2 cut(s)	200, 210
BsrDI	GCAATG	2 cut(s)	124, 1263
BsrGI	TGTACA	1 cut(s)	406
BsrI	ACTGG	2 cut(s)	988, 1211
BssECI	CCNNGG	6 cut(s)	428, 442, 472, 637, 815, 958
BssMI	GATC	6 cut(s)	7, 452, 586, 673, 796, 949
BssNI	GRCGYC	1 cut(s)	477
BssT1I	CCWWGG	2 cut(s)	637, 958
Bst2UI	CCWGG	3 cut(s)	430, 816, 1128
Bst4CI	ACNGT	3 cut(s)	666, 881, 1346
Bst6I	CTCTTC	3 cut(s)	173, 428, 856
BstACI	GRCGYC	1 cut(s)	477
BstAPI	GCANNNNNTGC	2 cut(s)	232, 764
BstAUI	TGTACA	1 cut(s)	406
BstBAI	YACGTR	1 cut(s)	731
BstC8I	GCNNGC	3 cut(s)	446, 699, 922
BstDEI	CTNAG	5 cut(s)	36, 345, 387, 398, 465
BstDSI	CCRYGG	2 cut(s)	442, 472
BstEII	GGTNACC	1 cut(s)	262
BstF5I	GGATG	2 cut(s)	1111, 1391
BstFNI	CGCG	4 cut(s)	444, 474, 609, 701
BstHHI	GCGC	1 cut(s)	703
BstKTI	GATC	6 cut(s)	10, 455, 589, 676, 799, 952
BstMAI	GTCTC	5 cut(s)	32, 120, 200, 210, 264
BstMBI	GATC	6 cut(s)	7, 452, 586, 673, 796, 949
BstMWI	GCNNNNNNNGC	8 cut(s)	101, 232, 282, 349, 569, 578, 764, 930
BstNI	CCWGG	3 cut(s)	430, 816, 1128
BstNSI	RCATGY	2 cut(s)	920, 1402
BstPI	GGTNACC	1 cut(s)	262
BstSCI	CCNGG	5 cut(s)	65, 428, 455, 814, 1126
BstSFI	CTRYAG	1 cut(s)	570
BstSLI	GKGCMC	1 cut(s)	699
BstUI	CGCG	4 cut(s)	444, 474, 609, 701
BstV1I	GCAGC	6 cut(s)	580, 584, 751, 770, 773, 1280
BstV2I	GAAGAC	1 cut(s)	138
BstX2I	RGATCY	4 cut(s)	7, 452, 673, 796
BstYI	RGATCY	4 cut(s)	7, 452, 673, 796
Bsu36I	CCTNAGG	1 cut(s)	345
BsuRI	GGCC	4 cut(s)	343, 392, 448, 842
BtgI	CCRYGG	2 cut(s)	442, 472
BtsCI	GGATG	2 cut(s)	1111, 1391
BtsI	GCAGTG	1 cut(s)	558
BtsIMutI	CAGTG	1 cut(s)	558
BveI	ACCTGC	1 cut(s)	526
Cac8I	GCNNGC	3 cut(s)	446, 699, 922
CaiI	CAGNNNCTG	2 cut(s)	352, 764
CfoI	GCGC	1 cut(s)	703
Cfr13I	GGNCC	3 cut(s)	69, 446, 855
Cfr42I	CCGCGG	2 cut(s)	445, 475
CseI	GACGC	1 cut(s)	466
Csp6I	GTAC	5 cut(s)	301, 407, 469, 1136, 1402
CviAII	CATG	7 cut(s)	163, 917, 1088, 1145, 1212, 1223, 1399
CviQI	GTAC	5 cut(s)	301, 407, 469, 1136, 1402
DdeI	CTNAG	5 cut(s)	36, 345, 387, 398, 465
DpnI	GATC	6 cut(s)	9, 454, 588, 675, 798, 951
DpnII	GATC	6 cut(s)	7, 452, 586, 673, 796, 949
DrdI	GACNNNNNNGTC	1 cut(s)	890
DseDI	GACNNNNNNGTC	1 cut(s)	890
Eam1104I	CTCTTC	3 cut(s)	173, 428, 856
EarI	CTCTTC	3 cut(s)	173, 428, 856
EciI	GGCGGA	3 cut(s)	291, 1345, 1358
Ecl136II	GAGCTC	1 cut(s)	462
Eco130I	CCWWGG	2 cut(s)	637, 958
Eco147I	AGGCCT	1 cut(s)	343
Eco24I	GRGCYC	1 cut(s)	464
Eco31I	GGTCTC	2 cut(s)	200, 210
Eco32I	GATATC	2 cut(s)	172, 625
Eco47I	GGWCC	2 cut(s)	69, 855
Eco53kI	GAGCTC	1 cut(s)	462
Eco57I	CTGAAG	2 cut(s)	197, 1143
Eco72I	CACGTG	1 cut(s)	731
Eco81I	CCTNAGG	1 cut(s)	345
Eco91I	GGTNACC	1 cut(s)	262
EcoICRI	GAGCTC	1 cut(s)	462
EcoO109I	RGGNCCY	1 cut(s)	69
EcoO65I	GGTNACC	1 cut(s)	262
EcoRII	CCWGG	3 cut(s)	428, 814, 1126
EcoRV	GATATC	2 cut(s)	172, 625
EcoT14I	CCWWGG	2 cut(s)	637, 958
EcoT38I	GRGCYC	1 cut(s)	464
ErhI	CCWWGG	2 cut(s)	637, 958
Esp3I	CGTCTC	2 cut(s)	120, 264
FaeI	CATG	7 cut(s)	166, 920, 1091, 1148, 1215, 1226, 1402
FaqI	GGGAC	3 cut(s)	82, 819, 1089
FatI	CATG	7 cut(s)	162, 916, 1087, 1144, 1211, 1222, 1398
FauI	CCCGC	2 cut(s)	205, 437
FauNDI	CATATG	1 cut(s)	583
FblI	GTMKAC	1 cut(s)	894
FokI	GGATG	2 cut(s)	1098, 1378
FriOI	GRGCYC	1 cut(s)	464
FspBI	CTAG	5 cut(s)	576, 638, 921, 959, 1405
GlaI	GCGC	1 cut(s)	702
GsaI	CCCAGC	1 cut(s)	1388
GsuI	CTGGAG	1 cut(s)	144
HaeIII	GGCC	4 cut(s)	343, 392, 448, 842
HapII	CCGG	5 cut(s)	66, 260, 267, 457, 858
HgaI	GACGC	1 cut(s)	466
HhaI	GCGC	1 cut(s)	703
Hin1I	GRCGYC	1 cut(s)	477
Hin1II	CATG	7 cut(s)	166, 920, 1091, 1148, 1215, 1226, 1402
Hin6I	GCGC	1 cut(s)	701
HinP1I	GCGC	1 cut(s)	701
HinfI	GANTC	7 cut(s)	62, 109, 134, 371, 385, 509, 1281
HpaII	CCGG	5 cut(s)	66, 260, 267, 457, 858
HphI	GGTGA	3 cut(s)	19, 274, 305
Hpy166II	GTNNAC	2 cut(s)	697, 895
Hpy188I	TCNGA	6 cut(s)	108, 114, 466, 678, 954, 1332
Hpy188III	TCNNGA	4 cut(s)	175, 241, 375, 1278
Hpy8I	GTNNAC	2 cut(s)	697, 895
Hpy99I	CGWCG	2 cut(s)	89, 711
HpyAV	CCTTC	7 cut(s)	832, 893, 923, 991, 1334, 1385, 1390
HpyCH4III	ACNGT	3 cut(s)	666, 881, 1346
HpyCH4IV	ACGT	4 cut(s)	15, 482, 730, 1365
HpyCH4V	TGCA	9 cut(s)	201, 235, 572, 596, 697, 852, 1177, 1252, 1268
HpyF10VI	GCNNNNNNNGC	8 cut(s)	101, 232, 282, 349, 569, 578, 764, 930
HpyF3I	CTNAG	5 cut(s)	36, 345, 387, 398, 465
HpySE526I	ACGT	4 cut(s)	15, 482, 730, 1365
Hsp92I	GRCGYC	1 cut(s)	477
Hsp92II	CATG	7 cut(s)	166, 920, 1091, 1148, 1215, 1226, 1402
HspAI	GCGC	1 cut(s)	701
KspI	CCGCGG	2 cut(s)	445, 475
Kzo9I	GATC	6 cut(s)	7, 452, 586, 673, 796, 949
LguI	GCTCTTC	1 cut(s)	428
LmnI	GCTCC	2 cut(s)	459, 722
Lsp1109I	GCAGC	6 cut(s)	580, 584, 751, 770, 773, 1280
LweI	GCATC	4 cut(s)	607, 1120, 1280, 1400
MaeI	CTAG	5 cut(s)	576, 638, 921, 959, 1405
MaeII	ACGT	4 cut(s)	15, 482, 730, 1365
MaeIII	GTNAC	6 cut(s)	241, 262, 478, 871, 881, 938
MalI	GATC	6 cut(s)	9, 454, 588, 675, 798, 951
MboI	GATC	6 cut(s)	7, 452, 586, 673, 796, 949
MflI	RGATCY	4 cut(s)	7, 452, 673, 796
MhlI	GDGCHC	2 cut(s)	464, 699
MluCI	AATT	8 cut(s)	19, 202, 355, 628, 689, 1004, 1019, 1182
MlyI	GAGTC	5 cut(s)	103, 128, 379, 380, 518
MmeI	TCCRAC	1 cut(s)	99
MseI	TTAA	5 cut(s)	12, 18, 633, 1044, 1094
MspA1I	CMGCKG	4 cut(s)	335, 444, 474, 764
MspI	CCGG	5 cut(s)	66, 260, 267, 457, 858
MspR9I	CCNGG	5 cut(s)	67, 430, 457, 816, 1128
MvaI	CCWGG	3 cut(s)	430, 816, 1128
MvnI	CGCG	4 cut(s)	444, 474, 609, 701
MwoI	GCNNNNNNNGC	8 cut(s)	101, 232, 282, 349, 569, 578, 764, 930
NciI	CCSGG	2 cut(s)	67, 457
NdeI	CATATG	1 cut(s)	583
NdeII	GATC	6 cut(s)	7, 452, 586, 673, 796, 949
NheI	GCTAGC	1 cut(s)	920
NlaIII	CATG	7 cut(s)	166, 920, 1091, 1148, 1215, 1226, 1402
NlaIV	GGNNCC	3 cut(s)	70, 724, 784
NmeAIII	GCCGAG	3 cut(s)	394, 418, 1218
NmuCI	GTSAC	5 cut(s)	241, 262, 478, 881, 938
NspI	RCATGY	2 cut(s)	920, 1402
PceI	AGGCCT	1 cut(s)	343
PciSI	GCTCTTC	1 cut(s)	428
PcsI	WCGNNNNNNNCGW	1 cut(s)	93
PfeI	GAWTC	2 cut(s)	62, 1281
PflFI	GACNNNGTC	1 cut(s)	247
PfoI	TCCNGGA	2 cut(s)	65, 455
PleI	GAGTC	5 cut(s)	103, 128, 379, 379, 517
PmaCI	CACGTG	1 cut(s)	731
PmlI	CACGTG	1 cut(s)	731
PpsI	GAGTC	5 cut(s)	103, 128, 379, 379, 517
Ppu21I	YACGTR	1 cut(s)	731
PpuMI	RGGWCCY	1 cut(s)	69
Psp124BI	GAGCTC	1 cut(s)	464
Psp1406I	AACGTT	1 cut(s)	15
Psp5II	RGGWCCY	1 cut(s)	69
Psp6I	CCWGG	3 cut(s)	428, 814, 1126
PspCI	CACGTG	1 cut(s)	731
PspEI	GGTNACC	1 cut(s)	262
PspFI	CCCAGC	1 cut(s)	1384
PspGI	CCWGG	3 cut(s)	428, 814, 1126
PspN4I	GGNNCC	3 cut(s)	70, 724, 784
PspPI	GGNCC	3 cut(s)	69, 446, 855
PspPPI	RGGWCCY	1 cut(s)	69
PsrI	GAACNNNNNNTAC	2 cut(s)	728, 760
PstI	CTGCAG	1 cut(s)	574
PstNI	CAGNNNCTG	2 cut(s)	352, 764
PsuI	RGATCY	4 cut(s)	7, 452, 673, 796
PsyI	GACNNNGTC	1 cut(s)	247
PvuII	CAGCTG	1 cut(s)	764
RsaI	GTAC	5 cut(s)	302, 408, 470, 1137, 1403
RsaNI	GTAC	5 cut(s)	301, 407, 469, 1136, 1402
SacI	GAGCTC	1 cut(s)	464
SacII	CCGCGG	2 cut(s)	445, 475
SapI	GCTCTTC	1 cut(s)	428
SaqAI	TTAA	5 cut(s)	12, 18, 633, 1044, 1094
Sau3AI	GATC	6 cut(s)	7, 452, 586, 673, 796, 949
Sau96I	GGNCC	3 cut(s)	69, 446, 855
SchI	GAGTC	5 cut(s)	103, 128, 379, 380, 518
ScrFI	CCNGG	5 cut(s)	67, 430, 457, 816, 1128
SduI	GDGCHC	2 cut(s)	464, 699
SfaNI	GCATC	4 cut(s)	607, 1120, 1280, 1400
SfcI	CTRYAG	1 cut(s)	570
Sfr303I	CCGCGG	2 cut(s)	445, 475
SgrBI	CCGCGG	2 cut(s)	445, 475
SinI	GGWCC	2 cut(s)	69, 855
Sse9I	AATT	8 cut(s)	19, 202, 355, 628, 689, 1004, 1019, 1182
SseBI	AGGCCT	1 cut(s)	343
SspMI	CTAG	5 cut(s)	576, 638, 921, 959, 1405
SstI	GAGCTC	1 cut(s)	464
StuI	AGGCCT	1 cut(s)	343
StyD4I	CCNGG	5 cut(s)	65, 428, 455, 814, 1126
StyI	CCWWGG	2 cut(s)	637, 958
TaaI	ACNGT	3 cut(s)	666, 881, 1346
TaiI	ACGT	4 cut(s)	18, 485, 733, 1368
TaqI	TCGA	1 cut(s)	589
TasI	AATT	8 cut(s)	19, 202, 355, 628, 689, 1004, 1019, 1182
TatI	WGTACW	2 cut(s)	406, 1401
TauI	GCSGC	8 cut(s)	338, 427, 441, 444, 477, 1064, 1374, 1391
TfiI	GAWTC	2 cut(s)	62, 1281
Tru1I	TTAA	5 cut(s)	12, 18, 633, 1044, 1094
Tru9I	TTAA	5 cut(s)	12, 18, 633, 1044, 1094
TscAI	CASTG	1 cut(s)	565
TseFI	GTSAC	5 cut(s)	241, 262, 478, 881, 938
TseI	GCWGC	6 cut(s)	572, 593, 758, 761, 764, 1268
Tsp45I	GTSAC	5 cut(s)	241, 262, 478, 881, 938
TspDTI	ATGAA	4 cut(s)	13, 151, 674, 1211
TspGWI	ACGGA	1 cut(s)	73
TspRI	CASTG	1 cut(s)	565
Tth111I	GACNNNGTC	1 cut(s)	247
VneI	GTGCAC	1 cut(s)	695
VpaK11BI	GGWCC	2 cut(s)	69, 855
XapI	RAATTY	3 cut(s)	355, 689, 1004
XceI	RCATGY	2 cut(s)	920, 1402
XmaJI	CCTAGG	2 cut(s)	637, 958
XmiI	GTMKAC	1 cut(s)	894
XspI	CTAG	5 cut(s)	576, 638, 921, 959, 1405

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.