Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0006951

Physical Location & Seq

Genomic Coordinates Forward (+)

43327270 .. 43330796

Gene Structure 3527 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0315500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGAATTTGTTTGTTTTGGACCAAGCGAAAGTGTATTTAGTTAAGAAGAGTGTACATATATATTTACAAGTCCTTGTCTTTCTGGTAGCTGTTGGTTCTTGGCAGGAAATGAATTCCGGGTTTGGTTTTGGACCCTCGAAACAGAATAATGGAATGTTTTCGATGGTGAAGCCTCCCGAAGATGAGGCCGAGGGTGTAGAGAAGGACCCAACAAATCGATATGTTCGGTACAATGAAATCTTGGGCAGGGGAGCCTTCAAGACTGTCTACAAGGCATTTGATGAAGTAGATGGAATAGAAGTTGCTTGGAACCAAGTGAAGATTGATGCTGTTTTGCGTTCACCAGACGATTTGGCAAAATTGTACTCTGAAGTCCATTTGCTGAAATCACTGAAACATGAAAATATTATCAAGTTCTATAATGCCTGGGTGGATGATCAGAGAAATACTATTAACATGATTACCGAGCTCTTCACATCTGGAAATCTAAGGCAATATCGTAAGAAGCATAAAAATGTTGATACAAAGGCCATAAGGAATTGGGCAAGGCAGATTCTCCGAGGTTTAGTCTATCTCCACAGTCAGAACCCGCCTATTATTCATAGGGACTTAAAATGTGACAATATTTTTATCAATGGAAACCACGGAGAAGTTAAAATTGGAGACCTGGGGTTGGCAGCTGTTCTGAAACAGCCTACTGCTCGAAGTGTGATTGGGACTCCTGAGTTTATGGCTCCAGAACTGTATGATGAGGAATATAATGAACTCATTGACGTGTATTCATTTGGGATGTGCATGCTAGAGATGGTTACTTTTGAGTATCCATATAGTGAATGCAAAAGTCCTGCTCAAATATTTAAGAAGGTTACCTCAGGTGTTAAACCTGCAGCCCTTGGTAAGGTGCATGACCCCCAAATTAAAAAGTTCATTGAGAAATGTCTGGTTCCAATGTCTGAGAGATCTTCTGCAAAGGAGCTGCTTAAAGATCCATTCCTTCAAGTTGAGAACCCTAGGGAACCAATGCGTGATCCCTTAAAGTTACCTAACCAAAATCTCAAAGCATTAAATTTACCCAAGTCTGGGCCATTTTCCATGGACATAGATAGTGATTATAAGCAGCTCTCAGTAAGCACATGTACAGGAAGCAACCATGGAAGTCCACAGGTTTTGGAATTTCAAAGGAAAAGTAAGAACAATGAGTTTAGGTTAAGGGGGACAAAAAGTGATGATAACTCAGTATCATTGACCTTGCGTATTGCTGATGCATGCGGTAAGGTGAAGAATATAGATTTTCTCTTTTACCTTGATACTGATACTGCAGTCTCTCTGGCGGCTGAGATGGTTGAACATCTGGAATTAGCAGATCATGATGTGGCCTTCATTGCTGAATTTATTGATTACTTGATAATGAAACTCCTACCTGGTTGGAAGCCATCATCTGATAATTCCTCAGGTGGACTGACCTATGGTGGATCCGAATGCCTTGATGGCAAATCCATAGTGGCATGCCCGTGGGGTTCACCGTTATCTGGTGTTCCTGCTGGTTCAATGGTTGATCAAGCTTGTAGCGTCTGGAATAATTCTGATACAATTAGTTTTAATGGTGGCATTTCCTCTTATCCAAGCTTTACTGAATTTGCCGATGGACATTCAAATGCATCATTCGCTTCTGTGTTTCGGGCTGATGATGCTTCCAGCAATATTAATAAAGCAGCTGAATCTGTTGGTTGCAACATTGTACATCCTAGGTATTCGTTTGTTGATGACAGAAGCTTGCAAGGAAATTACACTAGCAATGCAGGCCAAGTATTTCCTATCAATATCCCAAAGAACATAGAGTTGCCATCACATGATCAGAAAGTATCTAATGATATGAGCTTGTCAAGCAGCTGTTCATCGGTTTCTTTGGCAGTTGATCTGGATGTTGAGCTGAAGTTGGAACTCAATACTATTGAGGCACAATACCAGAACTTGTTTCAAGAGCTTTCTAGGATGAGGGAGAAAGCATTGGAAGGGGCCAGAAAGAAATGGATAGAAAAGCAGAAACTAACTGTTCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0010073 GO:0010093 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035670 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048449 GO:0048467 GO:0048481 GO:0048507 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

686

Amino Acids

76.72

Weight (kDa)

5.91

Isoelectric Point (pI)

39.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	76 - 326	7e-37	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	78 - 332	4.9e-53	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006951)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g20380 FvH4_7g20380 FvH4_7g20380 FvH4_7g20380 FvH4_7g20380 FvH4_7g20380 FvH4_7g20380
malus_domestica	MD01G1113400.v1.1 MD07G1180900.v1.1
prunus_persica	Prupe.2G220100_v2.0.a1
pyrus_communis	pycom01g14170
rosa_chinensis	RchiOBHm_Chr1g0364341
rosa_laevigata	RLG00000027494
rosa_multiflora	Rmu_sc0007470.1_g000004
rosa_roxburghii	Rroxscaffold_4G00292420
rosa_rugosa	Rorug01G0315400 Rorug01G0315400 Rorug01G0315400 Rorug01G0315400 Rorug01G0315500 Rorug01G0315500
rosa_samantha	Rh1AG323300 Rh1BG285800 Rh1CG302500 Rh1DG317300
rosa_wichuraiana	Rw1G028640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1113
Acc36I	ACCTGC	1 cut(s)	892
AccI	GTMKAC	1 cut(s)	267
AciI	CCGC	3 cut(s)	590, 1269, 1331
AclWI	GGATC	4 cut(s)	980, 1022, 1467, 1480
AcsI	RAATTY	6 cut(s)	4, 112, 1066, 1172, 1388, 1634
AcuI	CTGAAG	2 cut(s)	390, 1952
AfaI	GTAC	5 cut(s)	54, 230, 365, 1138, 1740
AfiI	CCNNNNNNNGG	5 cut(s)	673, 898, 1079, 1080, 1529
AflIII	ACRYGT	2 cut(s)	774, 1133
AgsI	TTSAA	7 cut(s)	259, 998, 1178, 1346, 1548, 1653, 1979
AjiI	CACGTC	1 cut(s)	775
AjnI	CCWGG	3 cut(s)	425, 666, 1420
AjuI	GAANNNNNNNTTGG	2 cut(s)	642, 674
Alw21I	GWGCWC	1 cut(s)	471
Alw26I	GTCTC	2 cut(s)	657, 1327
AlwI	GGATC	4 cut(s)	980, 1022, 1467, 1480
AoxI	GGCC	6 cut(s)	186, 528, 1082, 1374, 1801, 2016
ApeKI	GCWGC	6 cut(s)	677, 887, 976, 1117, 1712, 1887
ApoI	RAATTY	6 cut(s)	4, 112, 1066, 1172, 1388, 1634
AseI	ATTAAT	1 cut(s)	1704
Asp700I	GAANNNNTTC	1 cut(s)	157
AspA2I	CCTAGG	2 cut(s)	1010, 1745
AspS9I	GGNCC	5 cut(s)	19, 131, 205, 1082, 2016
AsuC2I	CCSGG	1 cut(s)	118
AsuHPI	GGTGA	4 cut(s)	178, 333, 1288, 1512
AvaII	GGWCC	3 cut(s)	19, 131, 205
AvrII	CCTAGG	2 cut(s)	1010, 1745
AxyI	CCTNAGG	2 cut(s)	871, 1450
BaeI	ACNNNNGTAYC	2 cut(s)	1305, 1338
BamHI	GGATCC	1 cut(s)	1472
BanII	GRGCYC	1 cut(s)	471
Bbv12I	GWGCWC	1 cut(s)	471
BbvI	GCAGC	6 cut(s)	689, 899, 963, 1129, 1724, 1899
BccI	CCATC	8 cut(s)	157, 284, 799, 1333, 1441, 1481, 1637, 1852
BciT130I	CCWGG	3 cut(s)	427, 668, 1422
BciVI	GTATCC	1 cut(s)	831
BclI	TGATCA	3 cut(s)	436, 1555, 1852
BcnI	CCSGG	1 cut(s)	118
BcoDI	GTCTC	2 cut(s)	657, 1327
BfaI	CTAG	5 cut(s)	800, 1011, 1746, 1791, 1989
BfmI	CTRYAG	2 cut(s)	885, 1317
BfuAI	ACCTGC	1 cut(s)	892
BfuI	GTATCC	1 cut(s)	831
BglI	GCCNNNNNGGC	1 cut(s)	1488
BglII	AGATCT	1 cut(s)	959
BisI	GCNGC	7 cut(s)	678, 888, 977, 1118, 1332, 1713, 1888
BlnI	CCTAGG	2 cut(s)	1010, 1745
BlsI	GCNGC	7 cut(s)	679, 889, 978, 1119, 1333, 1714, 1889
Bme1390I	CCNGG	4 cut(s)	118, 427, 668, 1422
Bme18I	GGWCC	3 cut(s)	19, 131, 205
BmgBI	CACGTC	1 cut(s)	775
BmgT120I	GGNCC	5 cut(s)	19, 131, 205, 1082, 2016
BmiI	GGNNCC	9 cut(s)	133, 207, 253, 311, 735, 945, 1017, 1474, 2017
BmrFI	CCNGG	4 cut(s)	118, 427, 668, 1422
BmsI	GCATC	4 cut(s)	316, 1252, 1667, 1678
BpmI	CTGGAG	1 cut(s)	720
BpuMI	CCSGG	1 cut(s)	118
Bsa29I	ATCGAT	1 cut(s)	217
BsaI	GGTCTC	1 cut(s)	657
Bsc4I	CCNNNNNNNGG	5 cut(s)	673, 898, 1079, 1080, 1529
Bse21I	CCTNAGG	2 cut(s)	871, 1450
Bse3DI	GCAATG	2 cut(s)	1380, 1801
BseBI	CCWGG	3 cut(s)	427, 668, 1422
BseCI	ATCGAT	1 cut(s)	217
BseGI	GGATG	5 cut(s)	439, 795, 1741, 1927, 1998
BseLI	CCNNNNNNNGG	5 cut(s)	673, 898, 1079, 1080, 1529
BseMI	GCAATG	2 cut(s)	1380, 1801
BseMII	CTCAG	7 cut(s)	714, 885, 945, 1137, 1248, 1326, 1464
BseXI	GCAGC	6 cut(s)	689, 899, 963, 1129, 1724, 1899
BshFI	GGCC	6 cut(s)	188, 530, 1084, 1376, 1803, 2018
BshVI	ATCGAT	1 cut(s)	217
BsiHKAI	GWGCWC	1 cut(s)	471
BsiSI	CCGG	1 cut(s)	117
BslFI	GGGAC	3 cut(s)	620, 730, 1228
BslI	CCNNNNNNNGG	5 cut(s)	673, 898, 1079, 1080, 1529
BsmAI	GTCTC	2 cut(s)	657, 1327
BsmFI	GGGAC	3 cut(s)	620, 730, 1228
BsmI	GAATGC	2 cut(s)	839, 1484
BsnI	GGCC	6 cut(s)	188, 530, 1084, 1376, 1803, 2018
Bso31I	GGTCTC	1 cut(s)	657
Bsp1286I	GDGCHC	1 cut(s)	471
Bsp1407I	TGTACA	3 cut(s)	52, 1136, 1738
Bsp143I	GATC	9 cut(s)	436, 959, 985, 1027, 1363, 1472, 1555, 1852, 1915
Bsp19I	CCATGG	2 cut(s)	1092, 1150
BspACI	CCGC	3 cut(s)	590, 1269, 1331
BspANI	GGCC	6 cut(s)	188, 530, 1084, 1376, 1803, 2018
BspCNI	CTCAG	7 cut(s)	715, 884, 946, 1136, 1247, 1327, 1463
BspDI	ATCGAT	1 cut(s)	217
BspHI	TCATGA	1 cut(s)	1366
BspLI	GGNNCC	9 cut(s)	133, 207, 253, 311, 735, 945, 1017, 1474, 2017
BspMAI	CTGCAG	2 cut(s)	889, 1321
BspMI	ACCTGC	1 cut(s)	892
BspPI	GGATC	4 cut(s)	980, 1022, 1467, 1480
BspQI	GCTCTTC	1 cut(s)	476
BspTNI	GGTCTC	1 cut(s)	657
BsrDI	GCAATG	2 cut(s)	1380, 1801
BsrGI	TGTACA	3 cut(s)	52, 1136, 1738
BssMI	GATC	9 cut(s)	436, 959, 985, 1027, 1363, 1472, 1555, 1852, 1915
BssT1I	CCWWGG	5 cut(s)	892, 1010, 1092, 1150, 1745
Bst2UI	CCWGG	3 cut(s)	427, 668, 1422
Bst4CI	ACNGT	5 cut(s)	265, 581, 744, 1524, 2053
Bst6I	CTCTTC	2 cut(s)	41, 476
BstAUI	TGTACA	3 cut(s)	52, 1136, 1738
BstC8I	GCNNGC	5 cut(s)	797, 1267, 1507, 1775, 1801
BstDEI	CTNAG	8 cut(s)	488, 723, 871, 954, 1123, 1234, 1335, 1450
BstDSI	CCRYGG	4 cut(s)	643, 1092, 1150, 1511
BstEII	GGTNACC	1 cut(s)	865
BstENI	CCTNNNNNAGG	1 cut(s)	896
BstF5I	GGATG	5 cut(s)	439, 795, 1741, 1927, 1998
BstKTI	GATC	9 cut(s)	439, 962, 988, 1030, 1366, 1475, 1558, 1855, 1918
BstMAI	GTCTC	2 cut(s)	657, 1327
BstMBI	GATC	9 cut(s)	436, 959, 985, 1027, 1363, 1472, 1555, 1852, 1915
BstMWI	GCNNNNNNNGC	6 cut(s)	1382, 1488, 1664, 1688, 1800, 1884
BstNI	CCWGG	3 cut(s)	427, 668, 1422
BstNSI	RCATGY	4 cut(s)	799, 1137, 1269, 1509
BstPI	GGTNACC	1 cut(s)	865
BstSCI	CCNGG	4 cut(s)	116, 425, 666, 1420
BstSFI	CTRYAG	2 cut(s)	885, 1317
BstV1I	GCAGC	6 cut(s)	689, 899, 963, 1129, 1724, 1899
BstX2I	RGATCY	3 cut(s)	959, 985, 1472
BstYI	RGATCY	3 cut(s)	959, 985, 1472
Bsu15I	ATCGAT	1 cut(s)	217
Bsu36I	CCTNAGG	2 cut(s)	871, 1450
BsuI	GTATCC	1 cut(s)	831
BsuRI	GGCC	6 cut(s)	188, 530, 1084, 1376, 1803, 2018
BsuTUI	ATCGAT	1 cut(s)	217
BtgI	CCRYGG	4 cut(s)	643, 1092, 1150, 1511
BtrI	CACGTC	1 cut(s)	775
BtsCI	GGATG	5 cut(s)	439, 795, 1741, 1927, 1998
BtsIMutI	CAGTG	1 cut(s)	389
BveI	ACCTGC	1 cut(s)	892
Cac8I	GCNNGC	5 cut(s)	797, 1267, 1507, 1775, 1801
CciI	TCATGA	1 cut(s)	1366
Cfr13I	GGNCC	5 cut(s)	19, 131, 205, 1082, 2016
ClaI	ATCGAT	1 cut(s)	217
CseI	GACGC	1 cut(s)	1558
CsiI	ACCWGGT	1 cut(s)	1420
Csp6I	GTAC	5 cut(s)	53, 229, 364, 1137, 1739
CspCI	CAANNNNNGTGG	2 cut(s)	1149, 1184
CviQI	GTAC	5 cut(s)	53, 229, 364, 1137, 1739
DdeI	CTNAG	8 cut(s)	488, 723, 871, 954, 1123, 1234, 1335, 1450
DpnI	GATC	9 cut(s)	438, 961, 987, 1029, 1365, 1474, 1557, 1854, 1917
DpnII	GATC	9 cut(s)	436, 959, 985, 1027, 1363, 1472, 1555, 1852, 1915
Eam1104I	CTCTTC	2 cut(s)	41, 476
EarI	CTCTTC	2 cut(s)	41, 476
Ecl136II	GAGCTC	1 cut(s)	469
Eco130I	CCWWGG	5 cut(s)	892, 1010, 1092, 1150, 1745
Eco24I	GRGCYC	1 cut(s)	471
Eco31I	GGTCTC	1 cut(s)	657
Eco47I	GGWCC	3 cut(s)	19, 131, 205
Eco53kI	GAGCTC	1 cut(s)	469
Eco57I	CTGAAG	2 cut(s)	390, 1952
Eco81I	CCTNAGG	2 cut(s)	871, 1450
Eco91I	GGTNACC	1 cut(s)	865
EcoICRI	GAGCTC	1 cut(s)	469
EcoNI	CCTNNNNNAGG	1 cut(s)	896
EcoO109I	RGGNCCY	1 cut(s)	205
EcoO65I	GGTNACC	1 cut(s)	865
EcoRI	GAATTC	1 cut(s)	112
EcoRII	CCWGG	3 cut(s)	425, 666, 1420
EcoT14I	CCWWGG	5 cut(s)	892, 1010, 1092, 1150, 1745
EcoT22I	ATGCAT	2 cut(s)	1267, 1660
EcoT38I	GRGCYC	1 cut(s)	471
ErhI	CCWWGG	5 cut(s)	892, 1010, 1092, 1150, 1745
FaqI	GGGAC	3 cut(s)	620, 730, 1228
FauI	CCCGC	1 cut(s)	597
FbaI	TGATCA	3 cut(s)	436, 1555, 1852
FblI	GTMKAC	1 cut(s)	267
Fnu4HI	GCNGC	7 cut(s)	678, 888, 977, 1118, 1332, 1713, 1888
FokI	GGATG	5 cut(s)	446, 802, 1728, 1934, 2005
FriOI	GRGCYC	1 cut(s)	471
Fsp4HI	GCNGC	7 cut(s)	678, 888, 977, 1118, 1332, 1713, 1888
FspBI	CTAG	5 cut(s)	800, 1011, 1746, 1791, 1989
GluI	GCNGC	7 cut(s)	678, 888, 977, 1118, 1332, 1713, 1888
GsuI	CTGGAG	1 cut(s)	720
HaeIII	GGCC	6 cut(s)	188, 530, 1084, 1376, 1803, 2018
HapII	CCGG	1 cut(s)	117
HgaI	GACGC	1 cut(s)	1558
HindIII	AAGCTT	3 cut(s)	1560, 1624, 1771
HinfI	GANTC	3 cut(s)	553, 718, 1718
HpaII	CCGG	1 cut(s)	117
HphI	GGTGA	4 cut(s)	178, 333, 1288, 1512
Hpy166II	GTNNAC	7 cut(s)	53, 268, 341, 1160, 1457, 1520, 2056
Hpy8I	GTNNAC	7 cut(s)	53, 268, 341, 1160, 1457, 1520, 2056
HpyAV	CCTTC	6 cut(s)	196, 265, 856, 1004, 1387, 2006
HpyCH4III	ACNGT	5 cut(s)	265, 581, 744, 1524, 2053
HpyCH4IV	ACGT	1 cut(s)	774
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1382, 1488, 1664, 1688, 1800, 1884
HpyF3I	CTNAG	8 cut(s)	488, 723, 871, 954, 1123, 1234, 1335, 1450
HpySE526I	ACGT	1 cut(s)	774
Ksp22I	TGATCA	3 cut(s)	436, 1555, 1852
Kzo9I	GATC	9 cut(s)	436, 959, 985, 1027, 1363, 1472, 1555, 1852, 1915
LguI	GCTCTTC	1 cut(s)	476
LmnI	GCTCC	3 cut(s)	251, 739, 973
Lsp1109I	GCAGC	6 cut(s)	689, 899, 963, 1129, 1724, 1899
LweI	GCATC	4 cut(s)	316, 1252, 1667, 1678
MabI	ACCWGGT	1 cut(s)	1420
MaeI	CTAG	5 cut(s)	800, 1011, 1746, 1791, 1989
MaeII	ACGT	1 cut(s)	774
MaeIII	GTNAC	4 cut(s)	617, 808, 865, 1038
MalI	GATC	9 cut(s)	438, 961, 987, 1029, 1365, 1474, 1557, 1854, 1917
MboI	GATC	9 cut(s)	436, 959, 985, 1027, 1363, 1472, 1555, 1852, 1915
MboII	GAAGA	6 cut(s)	58, 191, 331, 463, 954, 1291
MflI	RGATCY	3 cut(s)	959, 985, 1472
MhlI	GDGCHC	1 cut(s)	471
MlyI	GAGTC	1 cut(s)	712
MmeI	TCCRAC	2 cut(s)	1406, 1917
Mph1103I	ATGCAT	2 cut(s)	1267, 1660
MroXI	GAANNNNTTC	1 cut(s)	157
MslI	CAYNNNNRTG	4 cut(s)	513, 773, 1510, 1653
MspA1I	CMGCKG	3 cut(s)	680, 1715, 1890
MspI	CCGG	1 cut(s)	117
MspR9I	CCNGG	4 cut(s)	118, 427, 668, 1422
Mva1269I	GAATGC	2 cut(s)	839, 1484
MvaI	CCWGG	3 cut(s)	427, 668, 1422
MwoI	GCNNNNNNNGC	6 cut(s)	1382, 1488, 1664, 1688, 1800, 1884
NciI	CCSGG	1 cut(s)	118
NcoI	CCATGG	2 cut(s)	1092, 1150
NdeII	GATC	9 cut(s)	436, 959, 985, 1027, 1363, 1472, 1555, 1852, 1915
NlaIV	GGNNCC	9 cut(s)	133, 207, 253, 311, 735, 945, 1017, 1474, 2017
NmeAIII	GCCGAG	1 cut(s)	214
NmuCI	GTSAC	1 cut(s)	617
NsiI	ATGCAT	2 cut(s)	1267, 1660
NspI	RCATGY	4 cut(s)	799, 1137, 1269, 1509
PaeI	GCATGC	3 cut(s)	799, 1269, 1509
PagI	TCATGA	1 cut(s)	1366
PciI	ACATGT	1 cut(s)	1133
PciSI	GCTCTTC	1 cut(s)	476
PctI	GAATGC	2 cut(s)	839, 1484
PdmI	GAANNNNTTC	1 cut(s)	157
PfeI	GAWTC	2 cut(s)	553, 1718
PkrI	GCNGC	7 cut(s)	679, 889, 978, 1119, 1333, 1714, 1889
PleI	GAGTC	1 cut(s)	712
PpsI	GAGTC	1 cut(s)	712
PpuMI	RGGWCCY	1 cut(s)	205
PscI	ACATGT	1 cut(s)	1133
PshBI	ATTAAT	1 cut(s)	1704
PsiI	TTATAA	1 cut(s)	1113
Psp124BI	GAGCTC	1 cut(s)	471
Psp5II	RGGWCCY	1 cut(s)	205
Psp6I	CCWGG	3 cut(s)	425, 666, 1420
PspEI	GGTNACC	1 cut(s)	865
PspGI	CCWGG	3 cut(s)	425, 666, 1420
PspN4I	GGNNCC	9 cut(s)	133, 207, 253, 311, 735, 945, 1017, 1474, 2017
PspPI	GGNCC	5 cut(s)	19, 131, 205, 1082, 2016
PspPPI	RGGWCCY	1 cut(s)	205
PstI	CTGCAG	2 cut(s)	889, 1321
PsuI	RGATCY	3 cut(s)	959, 985, 1472
PvuII	CAGCTG	3 cut(s)	680, 1715, 1890
RsaI	GTAC	5 cut(s)	54, 230, 365, 1138, 1740
RsaNI	GTAC	5 cut(s)	53, 229, 364, 1137, 1739
RseI	CAYNNNNRTG	4 cut(s)	513, 773, 1510, 1653
SacI	GAGCTC	1 cut(s)	471
SapI	GCTCTTC	1 cut(s)	476
SatI	GCNGC	7 cut(s)	678, 888, 977, 1118, 1332, 1713, 1888
Sau3AI	GATC	9 cut(s)	436, 959, 985, 1027, 1363, 1472, 1555, 1852, 1915
Sau96I	GGNCC	5 cut(s)	19, 131, 205, 1082, 2016
SchI	GAGTC	1 cut(s)	712
ScrFI	CCNGG	4 cut(s)	118, 427, 668, 1422
SduI	GDGCHC	1 cut(s)	471
SexAI	ACCWGGT	1 cut(s)	1420
SfaNI	GCATC	4 cut(s)	316, 1252, 1667, 1678
SfcI	CTRYAG	2 cut(s)	885, 1317
SinI	GGWCC	3 cut(s)	19, 131, 205
SmiMI	CAYNNNNRTG	4 cut(s)	513, 773, 1510, 1653
SphI	GCATGC	3 cut(s)	799, 1269, 1509
SsiI	CCGC	3 cut(s)	590, 1269, 1331
SspI	AATATT	4 cut(s)	406, 625, 855, 1702
SspMI	CTAG	5 cut(s)	800, 1011, 1746, 1791, 1989
SstI	GAGCTC	1 cut(s)	471
StyD4I	CCNGG	4 cut(s)	116, 425, 666, 1420
StyI	CCWWGG	5 cut(s)	892, 1010, 1092, 1150, 1745
TaaI	ACNGT	5 cut(s)	265, 581, 744, 1524, 2053
TaiI	ACGT	1 cut(s)	777
TaqI	TCGA	4 cut(s)	137, 161, 217, 703
TatI	WGTACW	4 cut(s)	52, 363, 1136, 1738
TauI	GCSGC	1 cut(s)	1334
TfiI	GAWTC	2 cut(s)	553, 1718
TscAI	CASTG	1 cut(s)	396
TseFI	GTSAC	1 cut(s)	617
TseI	GCWGC	6 cut(s)	677, 887, 976, 1117, 1712, 1887
Tsp45I	GTSAC	1 cut(s)	617
TspGWI	ACGGA	1 cut(s)	660
TspRI	CASTG	1 cut(s)	396
VpaK11BI	GGWCC	3 cut(s)	19, 131, 205
VspI	ATTAAT	1 cut(s)	1704
XagI	CCTNNNNNAGG	1 cut(s)	896
XapI	RAATTY	6 cut(s)	4, 112, 1066, 1172, 1388, 1634
XceI	RCATGY	4 cut(s)	799, 1137, 1269, 1509
XmaJI	CCTAGG	2 cut(s)	1010, 1745
XmiI	GTMKAC	1 cut(s)	267
XmnI	GAANNNNTTC	1 cut(s)	157
XspI	CTAG	5 cut(s)	800, 1011, 1746, 1791, 1989
Zsp2I	ATGCAT	2 cut(s)	1267, 1660

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.