Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0005097

Physical Location & Seq

Genomic Coordinates Reverse (-)

24579814 .. 24582684

Gene Structure 2871 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1136500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 828 bp

ATGAGTTTTGTGTTCCGGGGCACCAGAGCGGATATCGAAAGTGGGTTCCCGGAATTCATACCAGAGCGCCGTGCAATGCGTGTTCATCCACCACGCTCTGTCAATTCCAACTCACTTGCTTTTCTTGTCACAGTTCTCTTGCTATTCATGATACTGAACTCACACCAGATGTCACCGAATTTTCTGCTGTGGCTAGTTCTTGGTGTCTTTTTGATGGCTACAACATTAAGGATGTATGCAACCTGTCAACAACTTCAAGCTCAAGCACAGGCTCATGCAGCGGCAGCCAGTGGCCTTCTTGGCCATACTGAATTGCGGTTGCGTATGCCACCATCAATTAGCTTAGCAACAAGAGGGCGCCTTCAAGGCCTCAGACTTCAGCTTGCACTTCTTGACCGGGAATTTGATGACCTAGATTATGAAACTTTGCGAGCTCTGGATTCCGATAATGTTCCAGCAGCTTCTTCTATGAGTGAGGAAGAGATAAATGCTCTTCCAGTCCATAAATACAAGGCTGTGGGTCCTCAAAATGGCGCTTCATCGATGCAACAAGCTTCATCTTCAGTACCTTCTGAGAAGACGCAAGAAACTGTCGACGCTGTTGGGAGCACAAAAGCAATGGAAGATGAACTGACTTGTAGCGTTTGCCTCGAGCAAGTTACTGTGGGAGAACTAATCCGCAGCCTTCCATGCTTGCATCAGTTCCATGCTAGTTGCATTGATCCATGGCTGAAGCAGCAGGGAACCTGCCCGGTGTGTAAATTCCGAGCAGGATCAGGGTTGCATGAAAATGGACAAGATGGAATGGATGCCTCTTACAGGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000209 GO:0001101 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010498 GO:0010646 GO:0010647 GO:0012505 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0023051 GO:0023056 GO:0030163 GO:0031984 GO:0032446 GO:0033993 GO:0036211 GO:0042175 GO:0042221 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0097305 GO:0098827 GO:0140096 GO:1901419 GO:1901421 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

276

Amino Acids

30.22

Weight (kDa)

5.9

Isoelectric Point (pI)

56.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	212 - 254	2.6e-13	Ring finger domain
zf-RING_11	PF17123	213 - 240	1.3e-08	RING-like zinc finger
zf-C3HC4_2	PF13923	213 - 253	4.3e-08	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	213 - 253	5.7e-08	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	230 - 254	2.4e-07	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005097)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55530
fragaria_vesca	FvH4_7g22830 FvH4_7g22830
malus_domestica	MD01G1136500.v1.1 MD07G1201500.v1.1 MD11G1096300.v1.1
prunus_persica	Prupe.2G238100_v2.0.a1 Prupe.2G238100_v2.0.a1 Prupe.2G238100_v2.0.a1 Prupe.2G238100_v2.0.a1 Prupe.2G238100_v2.0.a1 Prupe.6G071900_v2.0.a1 Prupe.6G071900_v2.0.a1 Prupe.6G071900_v2.0.a1
pyrus_communis	pycom01g15720 pycom07g18850 pycom11g08160
rosa_chinensis	RchiOBHm_Chr1g0367981
rosa_laevigata	RLG00000027249
rosa_multiflora	Rmu_co8208940.1_g000001
rosa_roxburghii	Rroxscaffold_4G00288980
rosa_rugosa	Rorug01G0338200 Rorug01G0338200 Rorug01G0338200 Rorug01G0338300
rosa_samantha	Rh1AG345000 Rh1BG307200 Rh1CG322800 Rh1DG339300
rosa_wichuraiana	Rw1G030700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	755
AccB1I	GGYRCC	2 cut(s)	20, 357
AccBSI	CCGCTC	1 cut(s)	29
AccI	GTMKAC	1 cut(s)	594
AciI	CCGC	4 cut(s)	29, 281, 316, 679
AclWI	GGATC	2 cut(s)	716, 781
AcoI	YGGCCR	1 cut(s)	301
AcsI	RAATTY	4 cut(s)	53, 178, 401, 761
AcuI	CTGAAG	3 cut(s)	362, 546, 752
AcyI	GRCGYC	1 cut(s)	358
AfaI	GTAC	1 cut(s)	567
AfiI	CCNNNNNNNGG	2 cut(s)	530, 819
AgsI	TTSAA	2 cut(s)	257, 365
AluBI	AGCT	6 cut(s)	260, 342, 382, 434, 461, 554
AluI	AGCT	6 cut(s)	260, 342, 382, 434, 461, 554
Alw21I	GWGCWC	2 cut(s)	436, 611
AlwI	GGATC	2 cut(s)	716, 781
Ama87I	CYCGRG	1 cut(s)	650
AoxI	GGCC	3 cut(s)	292, 301, 367
ApeKI	GCWGC	5 cut(s)	278, 284, 458, 681, 736
ApoI	RAATTY	4 cut(s)	53, 178, 401, 761
ArsI	GACNNNNNNTTYG	2 cut(s)	386, 418
AspLEI	GCGC	3 cut(s)	69, 360, 536
AspS9I	GGNCC	1 cut(s)	521
AsuC2I	CCSGG	4 cut(s)	17, 50, 398, 752
AsuHPI	GGTGA	1 cut(s)	165
AvaI	CYCGRG	1 cut(s)	650
AvaII	GGWCC	1 cut(s)	521
BaeGI	GKGCMC	1 cut(s)	23
BalI	TGGCCA	1 cut(s)	303
BanI	GGYRCC	2 cut(s)	20, 357
BanII	GRGCYC	1 cut(s)	436
BbsI	GAAGAC	1 cut(s)	584
Bbv12I	GWGCWC	2 cut(s)	436, 611
BbvI	GCAGC	5 cut(s)	290, 296, 470, 693, 748
BccI	CCATC	3 cut(s)	208, 340, 794
BceAI	ACGGC	1 cut(s)	54
BcgI	CGANNNNNNTGC	2 cut(s)	166, 200
BcnI	CCSGG	4 cut(s)	17, 50, 398, 752
BfaI	CTAG	3 cut(s)	194, 413, 711
BfoI	RGCGCY	3 cut(s)	70, 361, 537
BfuAI	ACCTGC	1 cut(s)	755
BglI	GCCNNNNNGGC	2 cut(s)	300, 366
BisI	GCNGC	6 cut(s)	279, 282, 285, 459, 682, 737
BlpI	GCTNAGC	1 cut(s)	343
BlsI	GCNGC	6 cut(s)	280, 283, 286, 460, 683, 738
Bme1390I	CCNGG	4 cut(s)	17, 50, 398, 752
Bme18I	GGWCC	1 cut(s)	521
BmeT110I	CYCGRG	1 cut(s)	650
BmgT120I	GGNCC	1 cut(s)	521
BmiI	GGNNCC	5 cut(s)	22, 47, 359, 522, 745
BmrFI	CCNGG	4 cut(s)	17, 50, 398, 752
BmsI	GCATC	3 cut(s)	534, 706, 799
BpiI	GAAGAC	1 cut(s)	584
Bpu1102I	GCTNAGC	1 cut(s)	343
BpuEI	CTTGAG	1 cut(s)	246
BpuMI	CCSGG	4 cut(s)	17, 50, 398, 752
Bsa29I	ATCGAT	1 cut(s)	542
BsaHI	GRCGYC	1 cut(s)	358
BsaJI	CCNNGG	2 cut(s)	16, 725
Bsc4I	CCNNNNNNNGG	2 cut(s)	530, 819
Bse1I	ACTGG	2 cut(s)	288, 497
Bse3DI	GCAATG	2 cut(s)	81, 624
BseCI	ATCGAT	1 cut(s)	542
BseDI	CCNNGG	2 cut(s)	16, 725
BseGI	GGATG	3 cut(s)	85, 237, 814
BseLI	CCNNNNNNNGG	2 cut(s)	530, 819
BseMI	GCAATG	2 cut(s)	81, 624
BseMII	CTCAG	2 cut(s)	385, 564
BseNI	ACTGG	2 cut(s)	288, 497
BseSI	GKGCMC	1 cut(s)	23
BseXI	GCAGC	5 cut(s)	290, 296, 470, 693, 748
BshFI	GGCC	3 cut(s)	294, 303, 369
BshNI	GGYRCC	2 cut(s)	20, 357
BshVI	ATCGAT	1 cut(s)	542
BsiHKAI	GWGCWC	2 cut(s)	436, 611
BsiHKCI	CYCGRG	1 cut(s)	650
BsiSI	CCGG	4 cut(s)	16, 50, 397, 752
BslI	CCNNNNNNNGG	2 cut(s)	530, 819
BsnI	GGCC	3 cut(s)	294, 303, 369
BsoBI	CYCGRG	1 cut(s)	650
Bsp1286I	GDGCHC	3 cut(s)	23, 436, 611
Bsp143I	GATC	2 cut(s)	721, 773
Bsp1720I	GCTNAGC	1 cut(s)	343
Bsp19I	CCATGG	1 cut(s)	725
BspACI	CCGC	4 cut(s)	29, 281, 316, 679
BspANI	GGCC	3 cut(s)	294, 303, 369
BspCNI	CTCAG	2 cut(s)	384, 565
BspDI	ATCGAT	1 cut(s)	542
BspHI	TCATGA	1 cut(s)	147
BspLI	GGNNCC	5 cut(s)	22, 47, 359, 522, 745
BspMI	ACCTGC	1 cut(s)	755
BspPI	GGATC	2 cut(s)	716, 781
BspQI	GCTCTTC	1 cut(s)	498
BspT107I	GGYRCC	2 cut(s)	20, 357
BsrBI	CCGCTC	1 cut(s)	29
BsrDI	GCAATG	2 cut(s)	81, 624
BsrI	ACTGG	2 cut(s)	288, 497
BssECI	CCNNGG	2 cut(s)	16, 725
BssMI	GATC	2 cut(s)	721, 773
BssNI	GRCGYC	1 cut(s)	358
BssT1I	CCWWGG	1 cut(s)	725
Bst4CI	ACNGT	3 cut(s)	133, 592, 664
Bst6I	CTCTTC	2 cut(s)	474, 498
BstACI	GRCGYC	1 cut(s)	358
BstC8I	GCNNGC	3 cut(s)	384, 432, 695
BstDEI	CTNAG	3 cut(s)	343, 371, 573
BstDSI	CCRYGG	1 cut(s)	725
BstENI	CCTNNNNNAGG	1 cut(s)	817
BstF5I	GGATG	3 cut(s)	85, 237, 814
BstH2I	RGCGCY	3 cut(s)	70, 361, 537
BstHHI	GCGC	3 cut(s)	69, 360, 536
BstKTI	GATC	2 cut(s)	724, 776
BstMBI	GATC	2 cut(s)	721, 773
BstMWI	GCNNNNNNNGC	6 cut(s)	278, 284, 300, 366, 690, 736
BstSCI	CCNGG	4 cut(s)	15, 48, 396, 750
BstSLI	GKGCMC	1 cut(s)	23
BstV1I	GCAGC	5 cut(s)	290, 296, 470, 693, 748
BstV2I	GAAGAC	1 cut(s)	584
Bsu15I	ATCGAT	1 cut(s)	542
BsuRI	GGCC	3 cut(s)	294, 303, 369
BsuTUI	ATCGAT	1 cut(s)	542
BtgI	CCRYGG	1 cut(s)	725
BtsCI	GGATG	3 cut(s)	85, 237, 814
BtsIMutI	CAGTG	1 cut(s)	295
BveI	ACCTGC	1 cut(s)	755
Cac8I	GCNNGC	3 cut(s)	384, 432, 695
CciI	TCATGA	1 cut(s)	147
CfoI	GCGC	3 cut(s)	69, 360, 536
Cfr13I	GGNCC	1 cut(s)	521
ClaI	ATCGAT	1 cut(s)	542
CseI	GACGC	2 cut(s)	589, 605
Csp6I	GTAC	1 cut(s)	566
CviAII	CATG	6 cut(s)	148, 275, 690, 707, 726, 785
CviQI	GTAC	1 cut(s)	566
DdeI	CTNAG	3 cut(s)	343, 371, 573
DinI	GGCGCC	1 cut(s)	359
DpnI	GATC	2 cut(s)	723, 775
DpnII	GATC	2 cut(s)	721, 773
EaeI	YGGCCR	1 cut(s)	301
Eam1104I	CTCTTC	2 cut(s)	474, 498
EarI	CTCTTC	2 cut(s)	474, 498
Ecl136II	GAGCTC	1 cut(s)	434
Eco130I	CCWWGG	1 cut(s)	725
Eco147I	AGGCCT	1 cut(s)	369
Eco24I	GRGCYC	1 cut(s)	436
Eco32I	GATATC	1 cut(s)	34
Eco47I	GGWCC	1 cut(s)	521
Eco53kI	GAGCTC	1 cut(s)	434
Eco57I	CTGAAG	3 cut(s)	362, 546, 752
Eco88I	CYCGRG	1 cut(s)	650
EcoICRI	GAGCTC	1 cut(s)	434
EcoNI	CCTNNNNNAGG	1 cut(s)	817
EcoO109I	RGGNCCY	1 cut(s)	521
EcoRI	GAATTC	1 cut(s)	53
EcoRV	GATATC	1 cut(s)	34
EcoT14I	CCWWGG	1 cut(s)	725
EcoT38I	GRGCYC	1 cut(s)	436
EgeI	GGCGCC	1 cut(s)	359
EheI	GGCGCC	1 cut(s)	359
ErhI	CCWWGG	1 cut(s)	725
FaeI	CATG	6 cut(s)	151, 278, 693, 710, 729, 788
FatI	CATG	6 cut(s)	147, 274, 689, 706, 725, 784
FblI	GTMKAC	1 cut(s)	594
Fnu4HI	GCNGC	6 cut(s)	279, 282, 285, 459, 682, 737
FokI	GGATG	3 cut(s)	72, 244, 821
FriOI	GRGCYC	1 cut(s)	436
Fsp4HI	GCNGC	6 cut(s)	279, 282, 285, 459, 682, 737
FspBI	CTAG	3 cut(s)	194, 413, 711
GlaI	GCGC	3 cut(s)	68, 359, 535
GluI	GCNGC	6 cut(s)	279, 282, 285, 459, 682, 737
HaeII	RGCGCY	3 cut(s)	70, 361, 537
HaeIII	GGCC	3 cut(s)	294, 303, 369
HapII	CCGG	4 cut(s)	16, 50, 397, 752
HgaI	GACGC	2 cut(s)	589, 605
HhaI	GCGC	3 cut(s)	69, 360, 536
Hin1I	GRCGYC	1 cut(s)	358
Hin1II	CATG	6 cut(s)	151, 278, 693, 710, 729, 788
Hin6I	GCGC	3 cut(s)	67, 358, 534
HinP1I	GCGC	3 cut(s)	67, 358, 534
HincII	GTYRAC	2 cut(s)	248, 595
HindII	GTYRAC	2 cut(s)	248, 595
HindIII	AAGCTT	1 cut(s)	552
HinfI	GANTC	1 cut(s)	440
HpaII	CCGG	4 cut(s)	16, 50, 397, 752
HphI	GGTGA	1 cut(s)	165
Hpy166II	GTNNAC	2 cut(s)	248, 595
Hpy188I	TCNGA	4 cut(s)	374, 445, 574, 767
Hpy188III	TCNNGA	3 cut(s)	148, 392, 437
Hpy8I	GTNNAC	2 cut(s)	248, 595
Hpy99I	CGWCG	1 cut(s)	599
HpyAV	CCTTC	4 cut(s)	305, 371, 579, 695
HpyCH4III	ACNGT	3 cut(s)	133, 592, 664
HpyCH4V	TGCA	8 cut(s)	74, 239, 278, 386, 547, 697, 717, 784
HpyF10VI	GCNNNNNNNGC	6 cut(s)	278, 284, 300, 366, 690, 736
HpyF3I	CTNAG	3 cut(s)	343, 371, 573
Hsp92I	GRCGYC	1 cut(s)	358
Hsp92II	CATG	6 cut(s)	151, 278, 693, 710, 729, 788
HspAI	GCGC	3 cut(s)	67, 358, 534
KasI	GGCGCC	1 cut(s)	357
Kzo9I	GATC	2 cut(s)	721, 773
LguI	GCTCTTC	1 cut(s)	498
LmnI	GCTCC	1 cut(s)	606
Lsp1109I	GCAGC	5 cut(s)	290, 296, 470, 693, 748
LweI	GCATC	3 cut(s)	534, 706, 799
MaeI	CTAG	3 cut(s)	194, 413, 711
MaeIII	GTNAC	3 cut(s)	127, 171, 658
MalI	GATC	2 cut(s)	723, 775
MbiI	CCGCTC	1 cut(s)	29
MboI	GATC	2 cut(s)	721, 773
MboII	GAAGA	6 cut(s)	456, 485, 491, 552, 589, 635
MhlI	GDGCHC	3 cut(s)	23, 436, 611
MlsI	TGGCCA	1 cut(s)	303
MluCI	AATT	7 cut(s)	53, 103, 178, 311, 336, 401, 761
MluNI	TGGCCA	1 cut(s)	303
Mly113I	GGCGCC	1 cut(s)	358
MmeI	TCCRAC	1 cut(s)	132
MnlI	CCTC	6 cut(s)	347, 380, 469, 534, 659, 823
Mox20I	TGGCCA	1 cut(s)	303
MscI	TGGCCA	1 cut(s)	303
MseI	TTAA	2 cut(s)	227, 826
MslI	CAYNNNNRTG	1 cut(s)	789
Msp20I	TGGCCA	1 cut(s)	303
MspA1I	CMGCKG	1 cut(s)	281
MspI	CCGG	4 cut(s)	16, 50, 397, 752
MspR9I	CCNGG	4 cut(s)	17, 50, 398, 752
MwoI	GCNNNNNNNGC	6 cut(s)	278, 284, 300, 366, 690, 736
NarI	GGCGCC	1 cut(s)	358
NciI	CCSGG	4 cut(s)	17, 50, 398, 752
NcoI	CCATGG	1 cut(s)	725
NdeII	GATC	2 cut(s)	721, 773
NlaIII	CATG	6 cut(s)	151, 278, 693, 710, 729, 788
NlaIV	GGNNCC	5 cut(s)	22, 47, 359, 522, 745
NmuCI	GTSAC	2 cut(s)	127, 171
PaeR7I	CTCGAG	1 cut(s)	650
PagI	TCATGA	1 cut(s)	147
PceI	AGGCCT	1 cut(s)	369
PciSI	GCTCTTC	1 cut(s)	498
PfeI	GAWTC	1 cut(s)	440
PfoI	TCCNGGA	1 cut(s)	48
PkrI	GCNGC	6 cut(s)	280, 283, 286, 460, 683, 738
PluTI	GGCGCC	1 cut(s)	361
PpuMI	RGGWCCY	1 cut(s)	521
Psp124BI	GAGCTC	1 cut(s)	436
Psp5II	RGGWCCY	1 cut(s)	521
PspN4I	GGNNCC	5 cut(s)	22, 47, 359, 522, 745
PspPI	GGNCC	1 cut(s)	521
PspPPI	RGGWCCY	1 cut(s)	521
PspXI	VCTCGAGB	1 cut(s)	650
RsaI	GTAC	1 cut(s)	567
RsaNI	GTAC	1 cut(s)	566
RseI	CAYNNNNRTG	1 cut(s)	789
SacI	GAGCTC	1 cut(s)	436
SalI	GTCGAC	1 cut(s)	593
SapI	GCTCTTC	1 cut(s)	498
SaqAI	TTAA	2 cut(s)	227, 826
SatI	GCNGC	6 cut(s)	279, 282, 285, 459, 682, 737
Sau3AI	GATC	2 cut(s)	721, 773
Sau96I	GGNCC	1 cut(s)	521
ScrFI	CCNGG	4 cut(s)	17, 50, 398, 752
SduI	GDGCHC	3 cut(s)	23, 436, 611
SfaNI	GCATC	3 cut(s)	534, 706, 799
SfiI	GGCCNNNNNGGCC	1 cut(s)	300
SfoI	GGCGCC	1 cut(s)	359
Sfr274I	CTCGAG	1 cut(s)	650
SinI	GGWCC	1 cut(s)	521
SlaI	CTCGAG	1 cut(s)	650
SmiMI	CAYNNNNRTG	1 cut(s)	789
SmlI	CTYRAG	2 cut(s)	261, 650
SmoI	CTYRAG	2 cut(s)	261, 650
Sse9I	AATT	7 cut(s)	53, 103, 178, 311, 336, 401, 761
SseBI	AGGCCT	1 cut(s)	369
SsiI	CCGC	4 cut(s)	29, 281, 316, 679
SspDI	GGCGCC	1 cut(s)	357
SspMI	CTAG	3 cut(s)	194, 413, 711
SstI	GAGCTC	1 cut(s)	436
StuI	AGGCCT	1 cut(s)	369
StyD4I	CCNGG	4 cut(s)	15, 48, 396, 750
StyI	CCWWGG	1 cut(s)	725
TaaI	ACNGT	3 cut(s)	133, 592, 664
TaqI	TCGA	4 cut(s)	36, 542, 594, 651
TasI	AATT	7 cut(s)	53, 103, 178, 311, 336, 401, 761
TauI	GCSGC	1 cut(s)	284
TfiI	GAWTC	1 cut(s)	440
Tru1I	TTAA	2 cut(s)	227, 826
Tru9I	TTAA	2 cut(s)	227, 826
TscAI	CASTG	1 cut(s)	295
TseFI	GTSAC	2 cut(s)	127, 171
TseI	GCWGC	5 cut(s)	278, 284, 458, 681, 736
Tsp45I	GTSAC	2 cut(s)	127, 171
TspDTI	ATGAA	8 cut(s)	46, 74, 136, 435, 528, 546, 642, 801
TspRI	CASTG	1 cut(s)	295
VpaK11BI	GGWCC	1 cut(s)	521
XagI	CCTNNNNNAGG	1 cut(s)	817
XapI	RAATTY	4 cut(s)	53, 178, 401, 761
XhoI	CTCGAG	1 cut(s)	650
XmiI	GTMKAC	1 cut(s)	594
XspI	CTAG	3 cut(s)	194, 413, 711

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.