Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0011483

Physical Location & Seq

Genomic Coordinates Forward (+)

28618069 .. 28622457

Gene Structure 4389 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1187800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGCCTTCGATAGAAGTCTCCGATTATCTACTCGCGGGAACCACTCCGAAGGACAAGAAGGAGAAGAAGATGAAGAAATTGATAAGCGAAACCCTAGACGCCGCGGCCGACTCGCCAGCTACTGAGAAGAAGTCGAAGAAGGAGTCTAAGCACAAAAAGCGGAAGGCTTCGGATGACGAGGACAGGAGCGAGACCAGCTCCGAGATGGGCGAGCCCGTGAATGTGAAGCCTCCGAAGAGCGAGGAGAAGAGCAAGAAGAAGTCAAAGAAGGCGAAGGTGGAGCCGGAGGAGGAGGACGAGGAGAAGACCGAGGAGATGGTTAAAGAGGATCCTAACGCGGTGTCTAAGTTTCGGATTTCGGTGCCCTTGAGGGCCAAATTGAAGGAGAATGGGATCGAATCCTTGTTCCCTATTCAGGCCATGACATTCGATACCATTTTGGATGGTTTGGATTTGGTCGGCCGGGCTCGAACAGGGCAGGGTAAAACTCTAGCTTTCGTGTTGCCCGTTTTGGAGTCTTTGACAAATGGGCCTGCAAGAGAATTTAGAAAGACTGGTTATGGTAGACCTCCAACTGTTATCGTGCTTTTACCCACCAGGGAACTTGCCAAACAGGTTTTCGCCGATTTTGAAGCTTATGGTGGTGCTGTGGGGCTAGCAGCGTGTTGTGTATATGGTGGATCTCCCTACGGGGCTCAAGAAAGTAAGCTAAGGAGAGGGGTGGATGTTGTTATTGGAACACCTGGCCGCATAAAGGATCATATAGAGAGGGGCAATATCGACTTGAGTACCTTGAAGGTTAGGATCCTTGATGAAGCTGATGAAATGCTGAGGATGGGCTTTGTTGATGATGTTGAACTCATTCTAGGCAAGGTGAAGGATGTAAGTAAAGTTCAAACGCTTCTCTTCAGTGCAACCTTGCCAAGTTGGGTGAAAGGCATTTCTTCTAGGTTTCTCAAACCAGATAAGAAAACTGTAGATCTTGTTGGTAATGAAAAAATGAAGGCCAGCACCAATGTTAGGCATATTGTTCTTCCTTGCTCCAGTTCAGCAAGATCAGAACTTATTCCTGATATCATACGTTGTTACAGCAGTGGAGGCCGCACAATCATTTTCACCGAGACAAAGGAAGCTGCTTCTGGACTTGCTGAGGCGCTGCCTGGAGCCCGAGCTTTGCATGGGGACATACAGCAGGGCCAACGTGAGGTCACACTTGCCGGTTTCAGGTCTGGCAAGTTTATGACATTAGTAGCCACGAATGTGGCAGCGCGTGGACTGGATATCAATGATGTTCAATTAATTATTCAGTGTGAACCCCCACGTGATGTAGAAGACTATATTCATCGATCTGGACGCACAGGGAGAGCAGGCAATTCTGGAGTTGCAGTCATGCTTTATGATCCCAGAAGGTCAAATTTTTCAAAAATCGAGAGAGAGTCGGGAGTGAAATTTGAACACATATCTGCTCCTCAGCCACTTGATATTGCCAAAGCAGTTGGTCAAGATGCAGCAGAAATGATAACCAAAATCTCTGACAGTGTAATTCCTGCTTTCAAATCTGTTGCCGAGGAGCTACTTAACACCTCTGGCCTATCTGCAGTAGATCTACTGGCAAAAGCACTTGCTAAAGCTGCTGGCTACACCGAGATAAAGAAGAGGTCACTTCTTAGCTCTATGGAAAACCATGTCACAATACTTCTCGAGGCTGGAAAGCCCATTTATTCACCGTCTTTTGCTTTTGGGGTCTTGAGGAGATTCTTGCCAGAGGAGAAGGTTGAGTCAGTGAAGGGTATGGCGCTAACAGCTGATGGAAATGGTGCAGTGTTTGATGTAGCAGCTGAAGATTTGGATTTGTTTCTTGCTGGTCAGGAAAATGCAGCTAATGTGAGCATAGAGGTGTTGAAATCACTGCCTGATTTACAAGAAAAAGAATCAAGGAATTCAAGATTTGGCGGTGGTGGAAGGTTTGGCCGTAGTGGTGGAGGTGGAGGTTTTCGAAATGATAGGTCTTCCAACAACCGATCCGGTGGTGGTGGGAGAGGTCGCGGCAACAGATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017151 GO:0019899 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko01110 map01110

Pfam Domains

Protein Families

DEAD GUCT Helicase_C

Protein Analysis

687

Amino Acids

74.35

Weight (kDa)

8.94

Isoelectric Point (pI)

46.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	137 - 312	8.1e-44	DEAD/DEAH box helicase
Helicase_C	PF00271	355 - 457	5.9e-26	Helicase conserved C-terminal domain
DD_DDX21-DDX50	PF26142	491 - 543	9.7e-20	DDX21/DDX50 dimerisation domain
GUCT	PF08152	546 - 641	1.6e-30	GUCT (NUC152) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011483)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62190
fragaria_vesca	FvH4_7g28410
malus_domestica	MD01G1187800.v1.1 MD07G1259900.v1.1 MD07G1260300.v1.1
prunus_persica	Prupe.2G284200_v2.0.a1 Prupe.2G284200_v2.0.a1 Prupe.2G284200_v2.0.a1
pyrus_communis	pycom07g23330
rosa_chinensis	RchiOBHm_Chr1g0375371
rosa_laevigata	RLG00000026667
rosa_multiflora	Rmu_sc0000554.1_g000041 Rmu_ssc0000106.1_g000003
rosa_roxburghii	Rroxscaffold_4G00282810
rosa_rugosa	Rorug01G0390800
rosa_samantha	Rh1AG401100 Rh1BG363200 Rh1CG376500 Rh1DG394000
rosa_wichuraiana	Rw1G035610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	361
AccI	GTMKAC	1 cut(s)	565
AccII	CGCG	5 cut(s)	35, 104, 338, 1270, 2046
AciI	CCGC	9 cut(s)	35, 102, 104, 160, 338, 748, 1102, 1953, 2046
AclWI	GGATC	9 cut(s)	323, 336, 401, 688, 765, 799, 812, 1394, 2016
AcoI	YGGCCR	4 cut(s)	105, 460, 745, 1969
AcsI	RAATTY	4 cut(s)	542, 1414, 1448, 1939
AcuI	CTGAAG	2 cut(s)	892, 1860
AcvI	CACGTG	1 cut(s)	1322
AcyI	GRCGYC	1 cut(s)	99
AfaI	GTAC	1 cut(s)	790
AfiI	CCNNNNNNNGG	5 cut(s)	415, 754, 1020, 1204, 1224
AjnI	CCWGG	3 cut(s)	596, 742, 1159
AjuI	GAANNNNNNNTTGG	2 cut(s)	602, 634
AleI	CACNNNNGTG	1 cut(s)	1259
Alw26I	GTCTC	3 cut(s)	22, 185, 1115
AlwI	GGATC	9 cut(s)	323, 336, 401, 688, 765, 799, 812, 1394, 2016
AlwNI	CAGNNNCTG	1 cut(s)	122
Ama87I	CYCGRG	2 cut(s)	1167, 1700
ApeKI	GCWGC	8 cut(s)	659, 1133, 1156, 1265, 1508, 1631, 1835, 1877
ApoI	RAATTY	4 cut(s)	542, 1414, 1448, 1939
ArsI	GACNNNNNNTTYG	2 cut(s)	128, 160
AseI	ATTAAT	1 cut(s)	1298
Asp700I	GAANNNNTTC	2 cut(s)	861, 1065
AspLEI	GCGC	3 cut(s)	1156, 1270, 1798
AspS9I	GGNCC	3 cut(s)	372, 530, 1195
AsuC2I	CCSGG	1 cut(s)	464
AsuHPI	GGTGA	4 cut(s)	886, 943, 1108, 1716
AsuII	TTCGAA	1 cut(s)	1996
AsuNHI	GCTAGC	1 cut(s)	655
AvaI	CYCGRG	2 cut(s)	1167, 1700
BaeGI	GKGCMC	1 cut(s)	366
BaeI	ACNNNNGTAYC	2 cut(s)	772, 805
BamHI	GGATCC	2 cut(s)	328, 804
BanI	GGYRCC	1 cut(s)	361
BanII	GRGCYC	4 cut(s)	216, 469, 697, 1168
BbrPI	CACGTG	1 cut(s)	1322
BbsI	GAAGAC	3 cut(s)	311, 1338, 2001
BbvCI	CCTCAGC	3 cut(s)	830, 1149, 1470
BbvI	GCAGC	8 cut(s)	671, 1120, 1143, 1277, 1520, 1618, 1847, 1889
BccI	CCATC	6 cut(s)	199, 310, 437, 829, 1802, 2049
BceAI	ACGGC	1 cut(s)	1956
BciT130I	CCWGG	3 cut(s)	598, 744, 1161
BcnI	CCSGG	1 cut(s)	464
BcoDI	GTCTC	3 cut(s)	22, 185, 1115
BfaI	CTAG	5 cut(s)	95, 491, 656, 866, 948
BfmI	CTRYAG	2 cut(s)	975, 1596
BfoI	RGCGCY	2 cut(s)	1157, 1799
BglII	AGATCT	2 cut(s)	979, 1603
Bme1390I	CCNGG	4 cut(s)	464, 598, 744, 1161
BmeT110I	CYCGRG	2 cut(s)	1167, 1700
BmgT120I	GGNCC	3 cut(s)	372, 530, 1195
BmiI	GGNNCC	6 cut(s)	40, 282, 330, 363, 806, 1165
BmrFI	CCNGG	4 cut(s)	464, 598, 744, 1161
BmsI	GCATC	1 cut(s)	1495
BmtI	GCTAGC	1 cut(s)	659
BpiI	GAAGAC	3 cut(s)	311, 1338, 2001
BplI	GAGNNNNNCTC	2 cut(s)	182, 214
BpmI	CTGGAG	3 cut(s)	1027, 1182, 1398
Bpu10I	CCTNAGC	4 cut(s)	710, 830, 1149, 1470
Bpu14I	TTCGAA	1 cut(s)	1996
BpuEI	CTTGAG	4 cut(s)	388, 681, 805, 1768
BpuMI	CCSGG	1 cut(s)	464
Bsa29I	ATCGAT	1 cut(s)	1345
BsaAI	YACGTR	1 cut(s)	1322
BsaHI	GRCGYC	1 cut(s)	99
BsaI	GGTCTC	1 cut(s)	185
BsaJI	CCNNGG	4 cut(s)	102, 309, 597, 1566
BsaWI	WCCGGW	1 cut(s)	2024
BsaXI	ACNNNNNCTCC	2 cut(s)	1371, 1401
Bsc4I	CCNNNNNNNGG	5 cut(s)	415, 754, 1020, 1204, 1224
Bse118I	RCCGGY	1 cut(s)	1217
Bse1I	ACTGG	4 cut(s)	559, 1044, 1281, 1614
BseBI	CCWGG	3 cut(s)	598, 744, 1161
BseCI	ATCGAT	1 cut(s)	1345
BseDI	CCNNGG	4 cut(s)	102, 309, 597, 1566
BseGI	GGATG	5 cut(s)	178, 448, 730, 840, 886
BseLI	CCNNNNNNNGG	5 cut(s)	415, 754, 1020, 1204, 1224
BseMII	CTCAG	4 cut(s)	114, 821, 1140, 1484
BseNI	ACTGG	4 cut(s)	559, 1044, 1281, 1614
BseRI	GAGGAG	9 cut(s)	257, 302, 305, 314, 326, 1458, 1583, 1765, 1781
BseSI	GKGCMC	1 cut(s)	366
BseX3I	CGGCCG	2 cut(s)	105, 460
BseXI	GCAGC	8 cut(s)	671, 1120, 1143, 1277, 1520, 1618, 1847, 1889
BsgI	GTGCAG	1 cut(s)	1839
Bsh1236I	CGCG	5 cut(s)	35, 104, 338, 1270, 2046
Bsh1285I	CGRYCG	2 cut(s)	108, 463
BshNI	GGYRCC	1 cut(s)	361
BshVI	ATCGAT	1 cut(s)	1345
BsiEI	CGRYCG	2 cut(s)	108, 463
BsiHKCI	CYCGRG	2 cut(s)	1167, 1700
BsiSI	CCGG	4 cut(s)	284, 463, 1218, 2025
BslFI	GGGAC	1 cut(s)	1196
BslI	CCNNNNNNNGG	5 cut(s)	415, 754, 1020, 1204, 1224
BsmAI	GTCTC	3 cut(s)	22, 185, 1115
BsmFI	GGGAC	1 cut(s)	1196
Bso31I	GGTCTC	1 cut(s)	185
BsoBI	CYCGRG	2 cut(s)	1167, 1700
Bsp119I	TTCGAA	1 cut(s)	1996
Bsp1286I	GDGCHC	5 cut(s)	216, 366, 469, 697, 1168
BspACI	CCGC	9 cut(s)	35, 102, 104, 160, 338, 748, 1102, 1953, 2046
BspCNI	CTCAG	4 cut(s)	115, 822, 1141, 1483
BspDI	ATCGAT	1 cut(s)	1345
BspFNI	CGCG	5 cut(s)	35, 104, 338, 1270, 2046
BspLI	GGNNCC	6 cut(s)	40, 282, 330, 363, 806, 1165
BspMAI	CTGCAG	1 cut(s)	1600
BspOI	GCTAGC	1 cut(s)	659
BspPI	GGATC	9 cut(s)	323, 336, 401, 688, 765, 799, 812, 1394, 2016
BspQI	GCTCTTC	2 cut(s)	230, 242
BspT104I	TTCGAA	1 cut(s)	1996
BspT107I	GGYRCC	1 cut(s)	361
BspTNI	GGTCTC	1 cut(s)	185
BsrFI	RCCGGY	1 cut(s)	1217
BsrI	ACTGG	4 cut(s)	559, 1044, 1281, 1614
BssAI	RCCGGY	1 cut(s)	1217
BssECI	CCNNGG	4 cut(s)	102, 309, 597, 1566
BssNI	GRCGYC	1 cut(s)	99
Bst2UI	CCWGG	3 cut(s)	598, 744, 1161
Bst4CI	ACNGT	4 cut(s)	577, 976, 1538, 1728
Bst6I	CTCTTC	4 cut(s)	230, 242, 911, 1649
BstACI	GRCGYC	1 cut(s)	99
BstBAI	YACGTR	1 cut(s)	1322
BstBI	TTCGAA	1 cut(s)	1996
BstC8I	GCNNGC	7 cut(s)	117, 212, 534, 657, 1009, 1369, 1636
BstDEI	CTNAG	8 cut(s)	123, 147, 345, 710, 830, 1149, 1470, 1667
BstDSI	CCRYGG	1 cut(s)	102
BstF5I	GGATG	5 cut(s)	178, 448, 730, 840, 886
BstFNI	CGCG	5 cut(s)	35, 104, 338, 1270, 2046
BstH2I	RGCGCY	2 cut(s)	1157, 1799
BstHHI	GCGC	3 cut(s)	1156, 1270, 1798
BstMAI	GTCTC	3 cut(s)	22, 185, 1115
BstMCI	CGRYCG	2 cut(s)	108, 463
BstMWI	GCNNNNNNNGC	5 cut(s)	157, 195, 1098, 1631, 1802
BstNI	CCWGG	3 cut(s)	598, 744, 1161
BstSCI	CCNGG	4 cut(s)	462, 596, 742, 1159
BstSFI	CTRYAG	2 cut(s)	975, 1596
BstSLI	GKGCMC	1 cut(s)	366
BstUI	CGCG	5 cut(s)	35, 104, 338, 1270, 2046
BstV1I	GCAGC	8 cut(s)	671, 1120, 1143, 1277, 1520, 1618, 1847, 1889
BstV2I	GAAGAC	3 cut(s)	311, 1338, 2001
BstX2I	RGATCY	5 cut(s)	328, 680, 804, 979, 1603
BstXI	CCANNNNNNTGG	1 cut(s)	1261
BstYI	RGATCY	5 cut(s)	328, 680, 804, 979, 1603
BstZI	CGGCCG	2 cut(s)	105, 460
Bsu15I	ATCGAT	1 cut(s)	1345
BsuTUI	ATCGAT	1 cut(s)	1345
BtgI	CCRYGG	1 cut(s)	102
BtsCI	GGATG	5 cut(s)	178, 448, 730, 840, 886
BtsI	GCAGTG	3 cut(s)	1099, 1827, 1907
BtsIMutI	CAGTG	7 cut(s)	916, 1099, 1313, 1543, 1788, 1827, 1907
Cac8I	GCNNGC	7 cut(s)	117, 212, 534, 657, 1009, 1369, 1636
CaiI	CAGNNNCTG	1 cut(s)	122
CfoI	GCGC	3 cut(s)	1156, 1270, 1798
Cfr10I	RCCGGY	1 cut(s)	1217
Cfr13I	GGNCC	3 cut(s)	372, 530, 1195
Cfr42I	CCGCGG	1 cut(s)	105
ClaI	ATCGAT	1 cut(s)	1345
CseI	GACGC	2 cut(s)	107, 1362
Csp6I	GTAC	1 cut(s)	789
CviAII	CATG	4 cut(s)	421, 1178, 1390, 1685
CviQI	GTAC	1 cut(s)	789
DdeI	CTNAG	8 cut(s)	123, 147, 345, 710, 830, 1149, 1470, 1667
EaeI	YGGCCR	4 cut(s)	105, 460, 745, 1969
EagI	CGGCCG	2 cut(s)	105, 460
Eam1104I	CTCTTC	4 cut(s)	230, 242, 911, 1649
EarI	CTCTTC	4 cut(s)	230, 242, 911, 1649
EclXI	CGGCCG	2 cut(s)	105, 460
Eco24I	GRGCYC	4 cut(s)	216, 469, 697, 1168
Eco31I	GGTCTC	1 cut(s)	185
Eco32I	GATATC	2 cut(s)	1075, 1282
Eco52I	CGGCCG	2 cut(s)	105, 460
Eco57I	CTGAAG	2 cut(s)	892, 1860
Eco72I	CACGTG	1 cut(s)	1322
Eco88I	CYCGRG	2 cut(s)	1167, 1700
EcoRI	GAATTC	1 cut(s)	1939
EcoRII	CCWGG	3 cut(s)	596, 742, 1159
EcoRV	GATATC	2 cut(s)	1075, 1282
EcoT38I	GRGCYC	4 cut(s)	216, 469, 697, 1168
FaeI	CATG	4 cut(s)	424, 1181, 1393, 1688
FaqI	GGGAC	1 cut(s)	1196
FatI	CATG	4 cut(s)	420, 1177, 1389, 1684
FauI	CCCGC	1 cut(s)	28
FblI	GTMKAC	1 cut(s)	565
FokI	GGATG	5 cut(s)	185, 455, 737, 847, 893
FriOI	GRGCYC	4 cut(s)	216, 469, 697, 1168
FspBI	CTAG	5 cut(s)	95, 491, 656, 866, 948
GlaI	GCGC	3 cut(s)	1155, 1269, 1797
GsuI	CTGGAG	3 cut(s)	1027, 1182, 1398
HaeII	RGCGCY	2 cut(s)	1157, 1799
HapII	CCGG	4 cut(s)	284, 463, 1218, 2025
HgaI	GACGC	2 cut(s)	107, 1362
HhaI	GCGC	3 cut(s)	1156, 1270, 1798
Hin1I	GRCGYC	1 cut(s)	99
Hin1II	CATG	4 cut(s)	424, 1181, 1393, 1688
Hin6I	GCGC	3 cut(s)	1154, 1268, 1796
HinP1I	GCGC	3 cut(s)	1154, 1268, 1796
HindIII	AAGCTT	1 cut(s)	633
HinfI	GANTC	8 cut(s)	110, 143, 398, 515, 1436, 1755, 1778, 1931
HpaII	CCGG	4 cut(s)	284, 463, 1218, 2025
HphI	GGTGA	4 cut(s)	886, 943, 1108, 1716
Hpy166II	GTNNAC	3 cut(s)	566, 1274, 1313
Hpy188I	TCNGA	8 cut(s)	22, 48, 172, 202, 234, 354, 1060, 1534
Hpy8I	GTNNAC	3 cut(s)	566, 1274, 1313
HpyCH4III	ACNGT	4 cut(s)	577, 976, 1538, 1728
HpyCH4IV	ACGT	3 cut(s)	1081, 1201, 1321
HpyCH4V	TGCA	8 cut(s)	536, 914, 1177, 1385, 1508, 1598, 1820, 1877
HpyF10VI	GCNNNNNNNGC	5 cut(s)	157, 195, 1098, 1631, 1802
HpyF3I	CTNAG	8 cut(s)	123, 147, 345, 710, 830, 1149, 1470, 1667
HpySE526I	ACGT	3 cut(s)	1081, 1201, 1321
Hsp92I	GRCGYC	1 cut(s)	99
Hsp92II	CATG	4 cut(s)	424, 1181, 1393, 1688
HspAI	GCGC	3 cut(s)	1154, 1268, 1796
KspI	CCGCGG	1 cut(s)	105
LguI	GCTCTTC	2 cut(s)	230, 242
LmnI	GCTCC	7 cut(s)	186, 203, 280, 1046, 1163, 1471, 1570
Lsp1109I	GCAGC	8 cut(s)	671, 1120, 1143, 1277, 1520, 1618, 1847, 1889
LweI	GCATC	1 cut(s)	1495
MaeI	CTAG	5 cut(s)	95, 491, 656, 866, 948
MaeII	ACGT	3 cut(s)	1081, 1201, 1321
MaeIII	GTNAC	4 cut(s)	1085, 1207, 1659, 1687
MflI	RGATCY	5 cut(s)	328, 680, 804, 979, 1603
MhlI	GDGCHC	5 cut(s)	216, 366, 469, 697, 1168
MlyI	GAGTC	5 cut(s)	104, 152, 524, 1445, 1787
MmeI	TCCRAC	2 cut(s)	596, 2037
MroXI	GAANNNNTTC	2 cut(s)	861, 1065
MseI	TTAA	3 cut(s)	321, 1298, 1578
MslI	CAYNNNNRTG	2 cut(s)	1259, 1895
MspA1I	CMGCKG	3 cut(s)	104, 1805, 1838
MspI	CCGG	4 cut(s)	284, 463, 1218, 2025
MspR9I	CCNGG	4 cut(s)	464, 598, 744, 1161
MvaI	CCWGG	3 cut(s)	598, 744, 1161
MvnI	CGCG	5 cut(s)	35, 104, 338, 1270, 2046
MwoI	GCNNNNNNNGC	5 cut(s)	157, 195, 1098, 1631, 1802
NciI	CCSGG	1 cut(s)	464
NheI	GCTAGC	1 cut(s)	655
NlaIII	CATG	4 cut(s)	424, 1181, 1393, 1688
NlaIV	GGNNCC	6 cut(s)	40, 282, 330, 363, 806, 1165
NmeAIII	GCCGAG	1 cut(s)	1591
NmuCI	GTSAC	3 cut(s)	1207, 1659, 1687
NspV	TTCGAA	1 cut(s)	1996
OliI	CACNNNNGTG	1 cut(s)	1259
PaeR7I	CTCGAG	1 cut(s)	1700
PciSI	GCTCTTC	2 cut(s)	230, 242
PcsI	WCGNNNNNNNCGW	2 cut(s)	105, 504
PdmI	GAANNNNTTC	2 cut(s)	861, 1065
PfeI	GAWTC	3 cut(s)	398, 1755, 1931
PleI	GAGTC	5 cut(s)	104, 151, 523, 1444, 1786
PmaCI	CACGTG	1 cut(s)	1322
PmlI	CACGTG	1 cut(s)	1322
PpsI	GAGTC	5 cut(s)	104, 151, 523, 1444, 1786
Ppu21I	YACGTR	1 cut(s)	1322
PshBI	ATTAAT	1 cut(s)	1298
Psp6I	CCWGG	3 cut(s)	596, 742, 1159
PspCI	CACGTG	1 cut(s)	1322
PspGI	CCWGG	3 cut(s)	596, 742, 1159
PspN4I	GGNNCC	6 cut(s)	40, 282, 330, 363, 806, 1165
PspPI	GGNCC	3 cut(s)	372, 530, 1195
PsrI	GAACNNNNNNTAC	2 cut(s)	876, 908
PstI	CTGCAG	1 cut(s)	1600
PstNI	CAGNNNCTG	1 cut(s)	122
PsuI	RGATCY	5 cut(s)	328, 680, 804, 979, 1603
PvuII	CAGCTG	2 cut(s)	1805, 1838
RsaI	GTAC	1 cut(s)	790
RsaNI	GTAC	1 cut(s)	789
RseI	CAYNNNNRTG	2 cut(s)	1259, 1895
SacII	CCGCGG	1 cut(s)	105
SapI	GCTCTTC	2 cut(s)	230, 242
SaqAI	TTAA	3 cut(s)	321, 1298, 1578
Sau96I	GGNCC	3 cut(s)	372, 530, 1195
SchI	GAGTC	5 cut(s)	104, 152, 524, 1445, 1787
ScrFI	CCNGG	4 cut(s)	464, 598, 744, 1161
SduI	GDGCHC	5 cut(s)	216, 366, 469, 697, 1168
SfaNI	GCATC	1 cut(s)	1495
SfcI	CTRYAG	2 cut(s)	975, 1596
Sfr274I	CTCGAG	1 cut(s)	1700
Sfr303I	CCGCGG	1 cut(s)	105
SfuI	TTCGAA	1 cut(s)	1996
SgrBI	CCGCGG	1 cut(s)	105
SlaI	CTCGAG	1 cut(s)	1700
SmiMI	CAYNNNNRTG	2 cut(s)	1259, 1895
SmlI	CTYRAG	5 cut(s)	367, 696, 784, 1700, 1747
SmoI	CTYRAG	5 cut(s)	367, 696, 784, 1700, 1747
SsiI	CCGC	9 cut(s)	35, 102, 104, 160, 338, 748, 1102, 1953, 2046
SspMI	CTAG	5 cut(s)	95, 491, 656, 866, 948
StyD4I	CCNGG	4 cut(s)	462, 596, 742, 1159
TaaI	ACNGT	4 cut(s)	577, 976, 1538, 1728
TaiI	ACGT	3 cut(s)	1084, 1204, 1324
TaqII	GACCGA	1 cut(s)	323
TauI	GCSGC	5 cut(s)	104, 107, 750, 1104, 2049
TfiI	GAWTC	3 cut(s)	398, 1755, 1931
Tru1I	TTAA	3 cut(s)	321, 1298, 1578
Tru9I	TTAA	3 cut(s)	321, 1298, 1578
TscAI	CASTG	7 cut(s)	916, 1099, 1313, 1543, 1788, 1827, 1914
TseFI	GTSAC	3 cut(s)	1207, 1659, 1687
TseI	GCWGC	8 cut(s)	659, 1133, 1156, 1265, 1508, 1631, 1835, 1877
Tsp45I	GTSAC	3 cut(s)	1207, 1659, 1687
TspDTI	ATGAA	6 cut(s)	86, 828, 837, 1008, 1016, 1331
TspRI	CASTG	7 cut(s)	916, 1099, 1313, 1543, 1788, 1827, 1914
VspI	ATTAAT	1 cut(s)	1298
XapI	RAATTY	4 cut(s)	542, 1414, 1448, 1939
XcmI	CCANNNNNNNNNTGG	1 cut(s)	202
XhoI	CTCGAG	1 cut(s)	1700
XmiI	GTMKAC	1 cut(s)	565
XmnI	GAANNNNTTC	2 cut(s)	861, 1065
XspI	CTAG	5 cut(s)	95, 491, 656, 866, 948

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.