Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000106.1

Orthogroup ID

OG0011483

Physical Location & Seq

Genomic Coordinates Reverse (-)

6388 .. 12440

Gene Structure 6053 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000106.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

atgatcaaagcgctcgcttttgttctgctcctagtcgccttcgtctccacgctttcacaagccaaattaagcatcctgcgaccccaacctgccacagggttcaacgtcagccatgtacagagtgccgggagttgttcttatacggttgatataaccaccagctgctcctcaaagaggtacacaagggatcaaatcagtatctcattcggggatggttatggcaaccagatttatgctccgcgactagacgatccatcctcgagaacgtttgagagttgttctacggacacatttgagatatatggaccctggctgtttcgttctactacaataccttcattcccagtgacatttgacgtttccgattatgtgctggaggctccgaagaaggagaagaagatgaaaaagtcgaaaaaggagtccataaccgactctccgattagtgagaagaagagcagtagcaagaaagagtcaaagctgaagaagcggaaagcgctggatatggaggccgacgacgaagacaggagcgagaccagctccgagctcggcgagcctgtcaatttgaagcccaacggcgattcttcgggtaaaactctggcttttgtgttgcctatattggagtcgttaacaaatggttctgctaaagaatttcgaaagactggatacggcagagcaccgactgttattgttcttttacccaccagggagttggccaagcaggtgtttgcggactttgaattttatggtggtgctgtggggttagcatcgtgttgtgtatatggtggatctccttacgcagctcaagaatataagttgaagagaggggttgatgtcattgtgggaacacctggtcgtatcaaggatcatattgagagggggaatatagacttgagcactttgaagtttcgggtccttgatgaagctgatgaaatgctgaggatgggttttgttgatgacgttgaacaaattctaggcaaggtcaaagatgtaactaaagttcaaacgcttctcttcagtgcaactttaccctcttgggtgcaaaatatttccaaaaggtttcttaaatcagataagaaaactgcagatctggttggtaatgaaaagatgaaggccagcgtcaatgttaggcatattgttcttccttgctctagttcagctagagtcgacgttattcctgatatcattcgttgttatagcagtggaggtcgcactattattttcactgagacaaaggattgtgcttctgagctttctgagaggttgcatggagcaagacctttgcacggggacatacagcaaggtcagcgggaggtcacacttgcaggtttcaggtctggcaaattctcgacattagtagccacaaatgtggcagctcgtggactggatatcaatgatgttcaattaattattcagtgtgaacctccacgtgatgtagaagactatatccatcgatccggacgcacagggagagccggaaccaactgtttactacataaactgactggaacacgttataaaacgattaaggtatataagaactgtgtcagttattttgcttattcggccttgaggaggttcttgccggaggagaaggtcgagtcagtgaagggtatggcgctaacaactgatggaaagggtgcagtgtttgatgtagctgctgaagatttggatatgtttcttactggttcgcaaaatgcagctggtatcagcatacaggtcttggactctttgccgagtttacaagaaaaagaagcaaggggaggaagatttggcggtggtggccgtggtggtagtaggtttggtggaagaggaggtggcaggggtttctctaatggaagaaatgataggtttggtggcggcggtggcagaggccgcggcaactacaacaggtggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017151 GO:0019899 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko01110 map01110

Pfam Domains

Protein Families

DEAD GUCT Helicase_C

Protein Analysis

631

Amino Acids

68.95

Weight (kDa)

9.25

Isoelectric Point (pI)

38.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011483)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62190
fragaria_vesca	FvH4_7g28410
malus_domestica	MD01G1187800.v1.1 MD07G1259900.v1.1 MD07G1260300.v1.1
prunus_persica	Prupe.2G284200_v2.0.a1 Prupe.2G284200_v2.0.a1 Prupe.2G284200_v2.0.a1
pyrus_communis	pycom07g23330
rosa_chinensis	RchiOBHm_Chr1g0375371
rosa_laevigata	RLG00000026667
rosa_multiflora	Rmu_sc0000554.1_g000041 Rmu_ssc0000106.1_g000003
rosa_roxburghii	Rroxscaffold_4G00282810
rosa_rugosa	Rorug01G0390800
rosa_samantha	Rh1AG401100 Rh1BG363200 Rh1CG376500 Rh1DG394000
rosa_wichuraiana	Rw1G035610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1515
AarI	CACCTGC	1 cut(s)	709
Acc36I	ACCTGC	3 cut(s)	97, 709, 1313
AccI	GTMKAC	1 cut(s)	1164
AccII	CGCG	2 cut(s)	241, 1875
AccIII	TCCGGA	1 cut(s)	1454
AciI	CCGC	9 cut(s)	239, 487, 728, 1306, 1773, 1857, 1860, 1873, 1875
AclI	AACGTT	1 cut(s)	266
AclWI	GGATC	5 cut(s)	195, 245, 793, 870, 1446
AcoI	YGGCCR	2 cut(s)	711, 1780
AcsI	RAATTY	4 cut(s)	647, 737, 966, 1340
AcuI	CTGAAG	3 cut(s)	500, 997, 1680
AcvI	CACGTG	1 cut(s)	1427
AfaI	GTAC	2 cut(s)	117, 179
AfeI	AGCGCT	2 cut(s)	12, 495
AfiI	CCNNNNNNNGG	4 cut(s)	95, 174, 1283, 1572
AflIII	ACRYGT	1 cut(s)	1508
AgsI	TTSAA	8 cut(s)	103, 565, 737, 817, 901, 962, 1001, 1400
AjnI	CCWGG	3 cut(s)	308, 701, 847
AleI	CACNNNNGTG	1 cut(s)	1364
Alw21I	GWGCWC	3 cut(s)	546, 676, 896
Alw26I	GTCTC	3 cut(s)	49, 524, 1220
AlwI	GGATC	5 cut(s)	195, 245, 793, 870, 1446
Ama87I	CYCGRG	1 cut(s)	259
Aor13HI	TCCGGA	1 cut(s)	1454
Aor51HI	AGCGCT	2 cut(s)	12, 495
AoxI	GGCC	6 cut(s)	507, 711, 1110, 1563, 1780, 1870
ApeKI	GCWGC	5 cut(s)	162, 797, 1370, 1655, 1697
ApoI	RAATTY	4 cut(s)	647, 737, 966, 1340
ArsI	GACNNNNNNTTYG	2 cut(s)	404, 436
AseI	ATTAAT	1 cut(s)	1403
Asp700I	GAANNNNTTC	1 cut(s)	966
AspLEI	GCGC	3 cut(s)	13, 496, 1618
AspS9I	GGNCC	2 cut(s)	305, 910
AsuC2I	CCSGG	1 cut(s)	127
AsuII	TTCGAA	1 cut(s)	652
AvaI	CYCGRG	1 cut(s)	259
AvaII	GGWCC	2 cut(s)	305, 910
BalI	TGGCCA	1 cut(s)	713
BanII	GRGCYC	1 cut(s)	546
BauI	CACGAG	1 cut(s)	1374
BbrPI	CACGTG	1 cut(s)	1427
BbsI	GAAGAC	2 cut(s)	525, 1443
Bbv12I	GWGCWC	3 cut(s)	546, 676, 896
BbvCI	CCTCAGC	1 cut(s)	935
BbvI	GCAGC	5 cut(s)	149, 809, 1382, 1642, 1709
BccI	CCATC	5 cut(s)	206, 262, 934, 1455, 1622
BceAI	ACGGC	3 cut(s)	589, 682, 1767
BciT130I	CCWGG	3 cut(s)	310, 703, 849
BciVI	GTATCC	1 cut(s)	656
BclI	TGATCA	1 cut(s)	3
BcnI	CCSGG	1 cut(s)	127
BcoDI	GTCTC	3 cut(s)	49, 524, 1220
BfaI	CTAG	5 cut(s)	32, 245, 971, 1149, 1158
BfmI	CTRYAG	1 cut(s)	1080
BfoI	RGCGCY	3 cut(s)	14, 497, 1619
BfuAI	ACCTGC	3 cut(s)	97, 709, 1313
BfuI	GTATCC	1 cut(s)	656
BglII	AGATCT	1 cut(s)	1084
BisI	GCNGC	8 cut(s)	163, 798, 1371, 1656, 1698, 1858, 1873, 1876
BlsI	GCNGC	8 cut(s)	164, 799, 1372, 1657, 1699, 1859, 1874, 1877
Bme1390I	CCNGG	4 cut(s)	127, 310, 703, 849
Bme18I	GGWCC	2 cut(s)	305, 910
BmeT110I	CYCGRG	1 cut(s)	259
BmgT120I	GGNCC	2 cut(s)	305, 910
BmiI	GGNNCC	4 cut(s)	307, 381, 911, 1477
BmrFI	CCNGG	4 cut(s)	127, 310, 703, 849
BmrI	ACTGGG	1 cut(s)	338
BmsI	GCATC	2 cut(s)	81, 773
BmuI	ACTGGG	1 cut(s)	338
BpiI	GAAGAC	2 cut(s)	525, 1443
BplI	GAGNNNNNCTC	2 cut(s)	521, 553
BpmI	CTGGAG	1 cut(s)	395
Bpu10I	CCTNAGC	1 cut(s)	935
Bpu14I	TTCGAA	1 cut(s)	652
BpuEI	CTTGAG	3 cut(s)	786, 910, 1588
BpuMI	CCSGG	1 cut(s)	127
Bsa29I	ATCGAT	1 cut(s)	1450
BsaAI	YACGTR	1 cut(s)	1427
BsaI	GGTCTC	1 cut(s)	524
BsaJI	CCNNGG	4 cut(s)	308, 702, 1783, 1873
BsaWI	WCCGGW	1 cut(s)	1454
BsaXI	ACNNNNNCTCC	2 cut(s)	418, 448
Bsc4I	CCNNNNNNNGG	4 cut(s)	95, 174, 1283, 1572
Bse1I	ACTGG	5 cut(s)	344, 664, 1386, 1507, 1687
BseAI	TCCGGA	1 cut(s)	1454
BseBI	CCWGG	3 cut(s)	310, 703, 849
BseCI	ATCGAT	1 cut(s)	1450
BseDI	CCNNGG	4 cut(s)	308, 702, 1783, 1873
BseGI	GGATG	4 cut(s)	72, 217, 254, 945
BseLI	CCNNNNNNNGG	4 cut(s)	95, 174, 1283, 1572
BseMII	CTCAG	4 cut(s)	926, 1215, 1236, 1245
BseNI	ACTGG	5 cut(s)	344, 664, 1386, 1507, 1687
BseRI	GAGGAG	4 cut(s)	157, 1585, 1601, 1824
BseXI	GCAGC	5 cut(s)	149, 809, 1382, 1642, 1709
BsgI	GTGCAG	1 cut(s)	1659
Bsh1236I	CGCG	2 cut(s)	241, 1875
BshFI	GGCC	6 cut(s)	509, 713, 1112, 1565, 1782, 1872
BshVI	ATCGAT	1 cut(s)	1450
BsiHKAI	GWGCWC	3 cut(s)	546, 676, 896
BsiHKCI	CYCGRG	1 cut(s)	259
BsiSI	CCGG	4 cut(s)	126, 1455, 1473, 1583
BslFI	GGGAC	1 cut(s)	1301
BslI	CCNNNNNNNGG	4 cut(s)	95, 174, 1283, 1572
BsmAI	GTCTC	3 cut(s)	49, 524, 1220
BsmBI	CGTCTC	1 cut(s)	49
BsmFI	GGGAC	1 cut(s)	1301
BsnI	GGCC	6 cut(s)	509, 713, 1112, 1565, 1782, 1872
Bso31I	GGTCTC	1 cut(s)	524
BsoBI	CYCGRG	1 cut(s)	259
Bsp119I	TTCGAA	1 cut(s)	652
Bsp1286I	GDGCHC	3 cut(s)	546, 676, 896
Bsp13I	TCCGGA	1 cut(s)	1454
Bsp1407I	TGTACA	1 cut(s)	115
Bsp143I	GATC	7 cut(s)	3, 187, 250, 785, 862, 1084, 1451
BspACI	CCGC	9 cut(s)	239, 487, 728, 1306, 1773, 1857, 1860, 1873, 1875
BspANI	GGCC	6 cut(s)	509, 713, 1112, 1565, 1782, 1872
BspCNI	CTCAG	4 cut(s)	927, 1216, 1237, 1246
BspDI	ATCGAT	1 cut(s)	1450
BspEI	TCCGGA	1 cut(s)	1454
BspFNI	CGCG	2 cut(s)	241, 1875
BspLI	GGNNCC	4 cut(s)	307, 381, 911, 1477
BspMAI	CTGCAG	1 cut(s)	1084
BspMI	ACCTGC	3 cut(s)	97, 709, 1313
BspPI	GGATC	5 cut(s)	195, 245, 793, 870, 1446
BspQI	GCTCTTC	1 cut(s)	446
BspT104I	TTCGAA	1 cut(s)	652
BspTNI	GGTCTC	1 cut(s)	524
BsrGI	TGTACA	1 cut(s)	115
BsrI	ACTGG	5 cut(s)	344, 664, 1386, 1507, 1687
BssECI	CCNNGG	4 cut(s)	308, 702, 1783, 1873
BssMI	GATC	7 cut(s)	3, 187, 250, 785, 862, 1084, 1451
BssSI	CACGAG	1 cut(s)	1374
Bst2BI	CACGAG	1 cut(s)	1374
Bst2UI	CCWGG	3 cut(s)	310, 703, 849
Bst4CI	ACNGT	4 cut(s)	145, 682, 1484, 1541
Bst6I	CTCTTC	4 cut(s)	446, 812, 1016, 1801
BstAUI	TGTACA	1 cut(s)	115
BstBAI	YACGTR	1 cut(s)	1427
BstBI	TTCGAA	1 cut(s)	652
BstC8I	GCNNGC	3 cut(s)	15, 551, 1114
BstDEI	CTNAG	4 cut(s)	935, 1224, 1245, 1254
BstDSI	CCRYGG	2 cut(s)	1783, 1873
BstENI	CCTNNNNNAGG	3 cut(s)	93, 172, 1570
BstF5I	GGATG	4 cut(s)	72, 217, 254, 945
BstFNI	CGCG	2 cut(s)	241, 1875
BstH2I	RGCGCY	3 cut(s)	14, 497, 1619
BstHHI	GCGC	3 cut(s)	13, 496, 1618
BstKTI	GATC	7 cut(s)	6, 190, 253, 788, 865, 1087, 1454
BstMAI	GTCTC	3 cut(s)	49, 524, 1220
BstMBI	GATC	7 cut(s)	3, 187, 250, 785, 862, 1084, 1451
BstMWI	GCNNNNNNNGC	9 cut(s)	484, 493, 534, 550, 1303, 1562, 1779, 1863, 1872
BstNI	CCWGG	3 cut(s)	310, 703, 849
BstSCI	CCNGG	4 cut(s)	125, 308, 701, 847
BstSFI	CTRYAG	1 cut(s)	1080
BstUI	CGCG	2 cut(s)	241, 1875
BstV1I	GCAGC	5 cut(s)	149, 809, 1382, 1642, 1709
BstV2I	GAAGAC	2 cut(s)	525, 1443
BstX2I	RGATCY	2 cut(s)	785, 1084
BstXI	CCANNNNNNTGG	2 cut(s)	709, 1366
BstYI	RGATCY	2 cut(s)	785, 1084
Bsu15I	ATCGAT	1 cut(s)	1450
BsuI	GTATCC	1 cut(s)	656
BsuRI	GGCC	6 cut(s)	509, 713, 1112, 1565, 1782, 1872
BsuTUI	ATCGAT	1 cut(s)	1450
BtgI	CCRYGG	2 cut(s)	1783, 1873
BtsCI	GGATG	4 cut(s)	72, 217, 254, 945
BtsI	GCAGTG	2 cut(s)	1204, 1647
BtsIMutI	CAGTG	7 cut(s)	351, 1021, 1204, 1221, 1418, 1608, 1647
BveI	ACCTGC	3 cut(s)	97, 709, 1313
Cac8I	GCNNGC	3 cut(s)	15, 551, 1114
CfoI	GCGC	3 cut(s)	13, 496, 1618
Cfr13I	GGNCC	2 cut(s)	305, 910
Cfr42I	CCGCGG	1 cut(s)	1876
ClaI	ATCGAT	1 cut(s)	1450
CseI	GACGC	2 cut(s)	1105, 1467
CsiI	ACCWGGT	1 cut(s)	847
Csp6I	GTAC	2 cut(s)	116, 178
CviAII	CATG	2 cut(s)	113, 1265
CviQI	GTAC	2 cut(s)	116, 178
DdeI	CTNAG	4 cut(s)	935, 1224, 1245, 1254
DpnI	GATC	7 cut(s)	5, 189, 252, 787, 864, 1086, 1453
DpnII	GATC	7 cut(s)	3, 187, 250, 785, 862, 1084, 1451
EaeI	YGGCCR	2 cut(s)	711, 1780
Eam1104I	CTCTTC	4 cut(s)	446, 812, 1016, 1801
EarI	CTCTTC	4 cut(s)	446, 812, 1016, 1801
Ecl136II	GAGCTC	1 cut(s)	544
Eco24I	GRGCYC	1 cut(s)	546
Eco31I	GGTCTC	1 cut(s)	524
Eco32I	GATATC	2 cut(s)	1180, 1387
Eco47I	GGWCC	2 cut(s)	305, 910
Eco47III	AGCGCT	2 cut(s)	12, 495
Eco53kI	GAGCTC	1 cut(s)	544
Eco57I	CTGAAG	3 cut(s)	500, 997, 1680
Eco72I	CACGTG	1 cut(s)	1427
Eco88I	CYCGRG	1 cut(s)	259
EcoICRI	GAGCTC	1 cut(s)	544
EcoNI	CCTNNNNNAGG	3 cut(s)	93, 172, 1570
EcoO109I	RGGNCCY	1 cut(s)	910
EcoRII	CCWGG	3 cut(s)	308, 701, 847
EcoRV	GATATC	2 cut(s)	1180, 1387
EcoT38I	GRGCYC	1 cut(s)	546
Esp3I	CGTCTC	1 cut(s)	49
FaeI	CATG	2 cut(s)	116, 1268
FaqI	GGGAC	1 cut(s)	1301
FatI	CATG	2 cut(s)	112, 1264
FauI	CCCGC	1 cut(s)	1299
FbaI	TGATCA	1 cut(s)	3
FblI	GTMKAC	1 cut(s)	1164
Fnu4HI	GCNGC	8 cut(s)	163, 798, 1371, 1656, 1698, 1858, 1873, 1876
FokI	GGATG	4 cut(s)	59, 224, 241, 952
FriOI	GRGCYC	1 cut(s)	546
Fsp4HI	GCNGC	8 cut(s)	163, 798, 1371, 1656, 1698, 1858, 1873, 1876
FspBI	CTAG	5 cut(s)	32, 245, 971, 1149, 1158
GlaI	GCGC	3 cut(s)	12, 495, 1617
GluI	GCNGC	8 cut(s)	163, 798, 1371, 1656, 1698, 1858, 1873, 1876
GsuI	CTGGAG	1 cut(s)	395
HaeII	RGCGCY	3 cut(s)	14, 497, 1619
HaeIII	GGCC	6 cut(s)	509, 713, 1112, 1565, 1782, 1872
HapII	CCGG	4 cut(s)	126, 1455, 1473, 1583
HgaI	GACGC	2 cut(s)	1105, 1467
HhaI	GCGC	3 cut(s)	13, 496, 1618
Hin1II	CATG	2 cut(s)	116, 1268
Hin6I	GCGC	3 cut(s)	11, 494, 1616
HinP1I	GCGC	3 cut(s)	11, 494, 1616
HincII	GTYRAC	2 cut(s)	627, 1165
HindII	GTYRAC	2 cut(s)	627, 1165
HinfI	GANTC	8 cut(s)	419, 431, 470, 578, 620, 1161, 1598, 1724
HpaI	GTTAAC	1 cut(s)	627
HpaII	CCGG	4 cut(s)	126, 1455, 1473, 1583
Hpy166II	GTNNAC	7 cut(s)	180, 627, 1165, 1379, 1418, 1487, 1739
Hpy188I	TCNGA	7 cut(s)	364, 384, 438, 541, 1069, 1246, 1255
Hpy188III	TCNNGA	5 cut(s)	261, 803, 1175, 1345, 1455
Hpy8I	GTNNAC	7 cut(s)	180, 627, 1165, 1379, 1418, 1487, 1739
Hpy99I	CGWCG	3 cut(s)	515, 518, 1169
HpyAV	CCTTC	6 cut(s)	49, 345, 382, 1102, 1585, 1600
HpyCH4III	ACNGT	4 cut(s)	145, 682, 1484, 1541
HpyCH4IV	ACGT	7 cut(s)	105, 266, 357, 957, 1167, 1426, 1510
HpyCH4V	TGCA	8 cut(s)	1019, 1039, 1082, 1264, 1282, 1322, 1640, 1697
HpyF10VI	GCNNNNNNNGC	9 cut(s)	484, 493, 534, 550, 1303, 1562, 1779, 1863, 1872
HpyF3I	CTNAG	4 cut(s)	935, 1224, 1245, 1254
HpySE526I	ACGT	7 cut(s)	105, 266, 357, 957, 1167, 1426, 1510
Hsp92II	CATG	2 cut(s)	116, 1268
HspAI	GCGC	3 cut(s)	11, 494, 1616
Kpn2I	TCCGGA	1 cut(s)	1454
Ksp22I	TGATCA	1 cut(s)	3
KspAI	GTTAAC	1 cut(s)	627
KspI	CCGCGG	1 cut(s)	1876
Kzo9I	GATC	7 cut(s)	3, 187, 250, 785, 862, 1084, 1451
LguI	GCTCTTC	1 cut(s)	446
LmnI	GCTCC	7 cut(s)	33, 170, 241, 385, 525, 542, 1268
Lsp1109I	GCAGC	5 cut(s)	149, 809, 1382, 1642, 1709
LweI	GCATC	2 cut(s)	81, 773
MabI	ACCWGGT	1 cut(s)	847
MaeI	CTAG	5 cut(s)	32, 245, 971, 1149, 1158
MaeII	ACGT	7 cut(s)	105, 266, 357, 957, 1167, 1426, 1510
MaeIII	GTNAC	3 cut(s)	346, 988, 1312
MalI	GATC	7 cut(s)	5, 189, 252, 787, 864, 1086, 1453
MboI	GATC	7 cut(s)	3, 187, 250, 785, 862, 1084, 1451
MflI	RGATCY	2 cut(s)	785, 1084
MhlI	GDGCHC	3 cut(s)	546, 676, 896
MlsI	TGGCCA	1 cut(s)	713
MluCI	AATT	8 cut(s)	65, 559, 647, 737, 966, 1340, 1400, 1404
MluNI	TGGCCA	1 cut(s)	713
MlyI	GAGTC	7 cut(s)	425, 428, 479, 629, 1170, 1607, 1718
Mox20I	TGGCCA	1 cut(s)	713
MroI	TCCGGA	1 cut(s)	1454
MroXI	GAANNNNTTC	1 cut(s)	966
MscI	TGGCCA	1 cut(s)	713
MseI	TTAA	5 cut(s)	68, 626, 1062, 1403, 1524
MslI	CAYNNNNRTG	1 cut(s)	1364
Msp20I	TGGCCA	1 cut(s)	713
MspA1I	CMGCKG	4 cut(s)	162, 1306, 1700, 1875
MspI	CCGG	4 cut(s)	126, 1455, 1473, 1583
MspR9I	CCNGG	4 cut(s)	127, 310, 703, 849
MvaI	CCWGG	3 cut(s)	310, 703, 849
MvnI	CGCG	2 cut(s)	241, 1875
MwoI	GCNNNNNNNGC	9 cut(s)	484, 493, 534, 550, 1303, 1562, 1779, 1863, 1872
NciI	CCSGG	1 cut(s)	127
NdeII	GATC	7 cut(s)	3, 187, 250, 785, 862, 1084, 1451
NlaIII	CATG	2 cut(s)	116, 1268
NlaIV	GGNNCC	4 cut(s)	307, 381, 911, 1477
NmeAIII	GCCGAG	2 cut(s)	525, 1758
NmuCI	GTSAC	2 cut(s)	346, 1312
NspV	TTCGAA	1 cut(s)	652
OliI	CACNNNNGTG	1 cut(s)	1364
PaeR7I	CTCGAG	1 cut(s)	259
PaqCI	CACCTGC	1 cut(s)	709
PciSI	GCTCTTC	1 cut(s)	446
PdmI	GAANNNNTTC	1 cut(s)	966
PfeI	GAWTC	1 cut(s)	578
PkrI	GCNGC	8 cut(s)	164, 799, 1372, 1657, 1699, 1859, 1874, 1877
PleI	GAGTC	7 cut(s)	425, 427, 478, 628, 1169, 1606, 1718
PmaCI	CACGTG	1 cut(s)	1427
PmlI	CACGTG	1 cut(s)	1427
PpsI	GAGTC	7 cut(s)	425, 427, 478, 628, 1169, 1606, 1718
Ppu21I	YACGTR	1 cut(s)	1427
PpuMI	RGGWCCY	1 cut(s)	910
PshBI	ATTAAT	1 cut(s)	1403
PsiI	TTATAA	1 cut(s)	1515
Psp124BI	GAGCTC	1 cut(s)	546
Psp1406I	AACGTT	1 cut(s)	266
Psp5II	RGGWCCY	1 cut(s)	910
Psp6I	CCWGG	3 cut(s)	308, 701, 847
PspCI	CACGTG	1 cut(s)	1427
PspGI	CCWGG	3 cut(s)	308, 701, 847
PspN4I	GGNNCC	4 cut(s)	307, 381, 911, 1477
PspPI	GGNCC	2 cut(s)	305, 910
PspPPI	RGGWCCY	1 cut(s)	910
PsrI	GAACNNNNNNTAC	2 cut(s)	981, 1013
PstI	CTGCAG	1 cut(s)	1084
PsuI	RGATCY	2 cut(s)	785, 1084
PvuII	CAGCTG	2 cut(s)	162, 1700
RsaI	GTAC	2 cut(s)	117, 179
RsaNI	GTAC	2 cut(s)	116, 178
RseI	CAYNNNNRTG	1 cut(s)	1364
SacI	GAGCTC	1 cut(s)	546
SacII	CCGCGG	1 cut(s)	1876
SalI	GTCGAC	1 cut(s)	1163
SapI	GCTCTTC	1 cut(s)	446
SaqAI	TTAA	5 cut(s)	68, 626, 1062, 1403, 1524
SatI	GCNGC	8 cut(s)	163, 798, 1371, 1656, 1698, 1858, 1873, 1876
Sau3AI	GATC	7 cut(s)	3, 187, 250, 785, 862, 1084, 1451
Sau96I	GGNCC	2 cut(s)	305, 910
SchI	GAGTC	7 cut(s)	425, 428, 479, 629, 1170, 1607, 1718
ScrFI	CCNGG	4 cut(s)	127, 310, 703, 849
SduI	GDGCHC	3 cut(s)	546, 676, 896
SexAI	ACCWGGT	1 cut(s)	847
SfaNI	GCATC	2 cut(s)	81, 773
SfcI	CTRYAG	1 cut(s)	1080
Sfr274I	CTCGAG	1 cut(s)	259
Sfr303I	CCGCGG	1 cut(s)	1876
SfuI	TTCGAA	1 cut(s)	652
SgrBI	CCGCGG	1 cut(s)	1876
SinI	GGWCC	2 cut(s)	305, 910
SlaI	CTCGAG	1 cut(s)	259
SmiMI	CAYNNNNRTG	1 cut(s)	1364
SmlI	CTYRAG	4 cut(s)	259, 801, 889, 1567
SmoI	CTYRAG	4 cut(s)	259, 801, 889, 1567
Sse9I	AATT	8 cut(s)	65, 559, 647, 737, 966, 1340, 1400, 1404
SsiI	CCGC	9 cut(s)	239, 487, 728, 1306, 1773, 1857, 1860, 1873, 1875
SspI	AATATT	1 cut(s)	1045
SspMI	CTAG	5 cut(s)	32, 245, 971, 1149, 1158
SstI	GAGCTC	1 cut(s)	546
StyD4I	CCNGG	4 cut(s)	125, 308, 701, 847
TaaI	ACNGT	4 cut(s)	145, 682, 1484, 1541
TaiI	ACGT	7 cut(s)	108, 269, 360, 960, 1170, 1429, 1513
TaqI	TCGA	7 cut(s)	260, 410, 652, 1164, 1346, 1450, 1596
TasI	AATT	8 cut(s)	65, 559, 647, 737, 966, 1340, 1400, 1404
TatI	WGTACW	1 cut(s)	115
TauI	GCSGC	3 cut(s)	1860, 1875, 1878
TfiI	GAWTC	1 cut(s)	578
Tru1I	TTAA	5 cut(s)	68, 626, 1062, 1403, 1524
Tru9I	TTAA	5 cut(s)	68, 626, 1062, 1403, 1524
TscAI	CASTG	7 cut(s)	351, 1021, 1204, 1228, 1418, 1608, 1647
TseFI	GTSAC	2 cut(s)	346, 1312
TseI	GCWGC	5 cut(s)	162, 797, 1370, 1655, 1697
Tsp45I	GTSAC	2 cut(s)	346, 1312
TspDTI	ATGAA	6 cut(s)	327, 416, 933, 942, 1113, 1121
TspGWI	ACGGA	1 cut(s)	299
TspRI	CASTG	7 cut(s)	351, 1021, 1204, 1228, 1418, 1608, 1647
VpaK11BI	GGWCC	2 cut(s)	305, 910
VspI	ATTAAT	1 cut(s)	1403
XagI	CCTNNNNNAGG	3 cut(s)	93, 172, 1570
XapI	RAATTY	4 cut(s)	647, 737, 966, 1340
XcmI	CCANNNNNNNNNTGG	1 cut(s)	706
XhoI	CTCGAG	1 cut(s)	259
XmiI	GTMKAC	1 cut(s)	1164
XmnI	GAANNNNTTC	1 cut(s)	966
XspI	CTAG	5 cut(s)	32, 245, 971, 1149, 1158

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.